Query 030701
Match_columns 173
No_of_seqs 223 out of 2573
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 04:39:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030701.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030701hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n0q_A 3ANK, 3 ankyrin repeats 99.7 2E-16 7E-21 107.3 9.4 78 93-170 6-92 (93)
2 4gpm_A Engineered protein OR26 99.7 3.4E-16 1.2E-20 118.7 9.5 78 93-170 74-160 (169)
3 3aaa_C Myotrophin, protein V-1 99.6 5.3E-15 1.8E-19 104.8 9.3 73 94-166 45-123 (123)
4 3aaa_C Myotrophin, protein V-1 99.6 1.3E-14 4.3E-19 102.9 9.5 76 95-170 13-97 (123)
5 2jab_A H10-2-G3; HER2, darpin, 99.6 1.5E-14 5E-19 104.4 9.1 75 95-169 53-136 (136)
6 4gpm_A Engineered protein OR26 99.5 2.7E-14 9.3E-19 108.2 10.3 77 94-170 42-127 (169)
7 2zgd_A 3 repeat synthetic anky 99.5 2.5E-14 8.7E-19 100.1 9.0 78 84-165 23-109 (110)
8 2jab_A H10-2-G3; HER2, darpin, 99.5 3E-14 1E-18 102.7 9.5 82 85-170 14-104 (136)
9 3c5r_A BARD-1, BRCA1-associate 99.5 2E-14 6.8E-19 103.5 8.5 74 93-166 47-126 (137)
10 1dcq_A PYK2-associated protein 99.5 1.9E-14 6.7E-19 116.8 9.2 80 93-172 173-264 (278)
11 4b93_B Ankyrin repeat domain-c 99.5 1.3E-14 4.4E-19 117.1 7.7 75 92-166 155-236 (269)
12 3twr_A Tankyrase-2; ankyrin re 99.5 5.5E-14 1.9E-18 103.9 10.3 76 94-169 80-163 (165)
13 2l6b_A NR1C; ankyrin, consensu 99.5 1.4E-14 4.8E-19 101.3 6.4 76 95-170 15-99 (115)
14 3twr_A Tankyrase-2; ankyrin re 99.5 5.1E-14 1.7E-18 104.0 9.7 77 94-170 47-132 (165)
15 3c5r_A BARD-1, BRCA1-associate 99.5 5.5E-14 1.9E-18 101.1 9.5 76 95-170 16-100 (137)
16 3f6q_A Integrin-linked protein 99.5 6.6E-14 2.2E-18 105.1 9.7 75 95-169 78-161 (179)
17 3v30_A DNA-binding protein rfx 99.5 6.7E-14 2.3E-18 104.1 9.6 78 94-171 74-160 (172)
18 1awc_B Protein (GA binding pro 99.5 5.7E-14 1.9E-18 102.9 8.6 74 96-169 41-123 (153)
19 1oy3_D Transcription factor in 99.5 5.7E-14 2E-18 111.1 9.0 79 92-170 161-249 (282)
20 1d9s_A Cyclin-dependent kinase 99.5 2.1E-14 7.2E-19 103.5 5.5 75 95-170 51-135 (136)
21 1n0r_A 4ANK, 4 ankyrin repeats 99.5 1.4E-13 4.7E-18 96.3 9.4 76 95-170 41-125 (126)
22 3f6q_A Integrin-linked protein 99.5 1.6E-13 5.5E-18 102.9 10.3 77 94-170 44-129 (179)
23 1ycs_B 53BP2, P53BP2; ankyrin 99.5 5.4E-14 1.9E-18 110.7 8.0 74 96-169 77-162 (239)
24 1d9s_A Cyclin-dependent kinase 99.5 2.8E-14 9.7E-19 102.9 5.5 75 95-170 18-102 (136)
25 3v30_A DNA-binding protein rfx 99.5 1.1E-13 3.8E-18 102.9 8.7 77 94-170 41-126 (172)
26 1ihb_A P18-INK4C(INK6), cyclin 99.5 1.3E-13 4.6E-18 101.1 9.1 77 94-170 75-161 (162)
27 2vge_A RELA-associated inhibit 99.5 1.2E-13 4.2E-18 108.8 9.4 78 93-170 58-147 (229)
28 2y1l_E Darpin-8.4; hydrolase-i 99.5 1.6E-13 5.4E-18 102.2 9.5 74 95-168 86-168 (169)
29 2rfm_A Putative ankyrin repeat 99.5 1.6E-13 5.3E-18 103.9 9.4 76 94-169 106-190 (192)
30 3v31_A Ankyrin repeat family A 99.5 1.4E-13 4.7E-18 101.9 8.8 77 94-170 74-159 (167)
31 2y1l_E Darpin-8.4; hydrolase-i 99.5 2E-13 6.9E-18 101.6 9.7 77 94-170 52-137 (169)
32 2dzn_A Probable 26S proteasome 99.5 1.7E-13 5.9E-18 105.5 9.6 76 93-168 144-227 (228)
33 1ikn_D Protein (I-kappa-B-alph 99.5 1.6E-13 5.4E-18 106.9 9.5 78 93-170 121-208 (236)
34 3v31_A Ankyrin repeat family A 99.5 1.8E-13 6E-18 101.3 9.2 77 94-170 41-126 (167)
35 1awc_B Protein (GA binding pro 99.5 1.4E-13 4.8E-18 100.7 8.5 72 94-165 72-152 (153)
36 3ehr_A Osteoclast-stimulating 99.5 1.3E-13 4.3E-18 106.9 8.6 63 96-158 113-182 (222)
37 3ehr_A Osteoclast-stimulating 99.5 1.7E-13 5.9E-18 106.1 8.6 79 92-170 76-164 (222)
38 3aji_A 26S proteasome non-ATPa 99.5 3.1E-13 1.1E-17 104.4 10.0 78 93-170 143-229 (231)
39 1bd8_A P19INK4D CDK4/6 inhibit 99.5 2.4E-13 8.2E-18 99.3 8.8 74 94-168 73-155 (156)
40 2rfm_A Putative ankyrin repeat 99.5 2.1E-13 7.2E-18 103.2 8.7 77 94-170 73-158 (192)
41 2b0o_E UPLC1; arfgap, structur 99.5 1.9E-13 6.6E-18 112.2 9.1 79 93-171 194-284 (301)
42 3deo_A Signal recognition part 99.5 2.2E-13 7.4E-18 103.0 8.5 72 96-168 51-132 (183)
43 4hbd_A KN motif and ankyrin re 99.4 2.4E-13 8.2E-18 109.5 9.2 78 92-169 186-273 (276)
44 1n0r_A 4ANK, 4 ankyrin repeats 99.4 2.9E-13 1E-17 94.6 8.4 78 93-170 6-92 (126)
45 1bd8_A P19INK4D CDK4/6 inhibit 99.4 2.5E-13 8.5E-18 99.2 8.3 76 92-168 39-123 (156)
46 2f8y_A Notch homolog 1, transl 99.4 4E-13 1.4E-17 103.3 9.7 79 93-171 129-216 (223)
47 1bi7_B P16INK4A, MTS1, multipl 99.4 5.4E-14 1.8E-18 103.6 4.6 74 96-170 52-135 (156)
48 1k1a_A B-cell lymphoma 3-encod 99.4 3.7E-13 1.3E-17 104.3 9.4 71 95-165 156-232 (241)
49 3jxi_A Vanilloid receptor-rela 99.4 3.8E-13 1.3E-17 106.1 9.6 77 94-170 98-209 (260)
50 2vge_A RELA-associated inhibit 99.4 4.5E-13 1.5E-17 105.5 10.0 84 83-170 19-111 (229)
51 1s70_B 130 kDa myosin-binding 99.4 2.1E-13 7.3E-18 109.2 8.1 73 96-168 47-128 (299)
52 3lvq_E ARF-GAP with SH3 domain 99.4 1.7E-13 5.6E-18 119.4 8.0 78 93-170 175-264 (497)
53 1ihb_A P18-INK4C(INK6), cyclin 99.4 2E-13 7E-18 100.1 7.3 75 95-170 44-127 (162)
54 3t8k_A Uncharacterized protein 99.4 2.8E-13 9.7E-18 103.9 7.9 76 92-167 41-141 (186)
55 3deo_A Signal recognition part 99.4 3.7E-13 1.3E-17 101.7 8.4 65 93-157 80-151 (183)
56 1bi7_B P16INK4A, MTS1, multipl 99.4 1.2E-13 4E-18 101.8 5.5 76 94-170 17-102 (156)
57 2etb_A Transient receptor pote 99.4 6.1E-13 2.1E-17 104.8 10.0 78 93-170 94-205 (256)
58 2xai_A ASB-9, ankyrin repeat a 99.4 4.9E-13 1.7E-17 106.2 9.1 72 96-167 10-90 (261)
59 4b93_B Ankyrin repeat domain-c 99.4 3.3E-13 1.1E-17 108.8 8.2 77 94-170 124-209 (269)
60 3ui2_A Signal recognition part 99.4 3.2E-13 1.1E-17 107.0 7.8 62 96-157 84-152 (244)
61 1ycs_B 53BP2, P53BP2; ankyrin 99.4 5.1E-13 1.7E-17 105.1 8.7 76 95-170 43-127 (239)
62 3jue_A Arfgap with coiled-coil 99.4 5.5E-13 1.9E-17 112.9 9.5 78 93-170 239-325 (368)
63 3ui2_A Signal recognition part 99.4 6.4E-13 2.2E-17 105.2 9.2 78 92-170 48-135 (244)
64 2pnn_A Transient receptor pote 99.4 7.4E-13 2.5E-17 105.4 9.6 77 94-170 106-217 (273)
65 3hra_A Ankyrin repeat family p 99.4 5.7E-13 1.9E-17 100.9 7.9 75 94-168 111-200 (201)
66 3utm_A Tankyrase-1; tankyrase, 99.4 1E-12 3.4E-17 106.6 9.7 78 93-170 62-148 (351)
67 2f8y_A Notch homolog 1, transl 99.4 1.1E-12 3.7E-17 100.8 9.4 78 93-170 96-182 (223)
68 2rfa_A Transient receptor pote 99.4 1.1E-12 3.7E-17 101.6 9.5 78 93-170 79-182 (232)
69 3d9h_A CDNA FLJ77766, highly s 99.4 1.4E-12 4.7E-17 105.3 10.4 77 92-168 193-275 (285)
70 1yyh_A HN1;, notch 1, ankyrin 99.4 5.2E-13 1.8E-17 105.5 7.8 73 96-168 131-212 (253)
71 1yyh_A HN1;, notch 1, ankyrin 99.4 8.1E-13 2.8E-17 104.3 8.8 78 92-169 160-246 (253)
72 2dzn_A Probable 26S proteasome 99.4 1.1E-12 3.8E-17 100.9 9.3 76 94-169 112-198 (228)
73 3ljn_A Hypothetical protein; a 99.4 4.9E-13 1.7E-17 110.6 7.7 77 93-169 177-267 (364)
74 2xai_A ASB-9, ankyrin repeat a 99.4 9.2E-13 3.1E-17 104.6 8.9 76 93-168 138-219 (261)
75 3kea_A K1L; tropism, ANK repea 99.4 4.8E-13 1.7E-17 108.1 7.3 73 96-168 69-151 (285)
76 1k1a_A B-cell lymphoma 3-encod 99.4 1.4E-12 4.8E-17 101.0 9.5 78 93-170 120-207 (241)
77 2rfa_A Transient receptor pote 99.4 1.3E-12 4.5E-17 101.1 9.2 79 93-171 125-222 (232)
78 1oy3_D Transcription factor in 99.4 5.2E-13 1.8E-17 105.5 7.1 76 94-169 14-101 (282)
79 2fo1_E LIN-12 protein; beta-ba 99.4 6E-13 2.1E-17 111.4 7.6 80 93-172 283-372 (373)
80 2etb_A Transient receptor pote 99.4 6.4E-13 2.2E-17 104.7 7.2 78 93-170 140-245 (256)
81 3d9h_A CDNA FLJ77766, highly s 99.4 1.7E-12 5.7E-17 104.8 9.7 75 95-169 65-148 (285)
82 3utm_A Tankyrase-1; tankyrase, 99.4 1.8E-12 6.1E-17 105.2 9.9 76 93-169 251-332 (351)
83 1s70_B 130 kDa myosin-binding 99.4 1.1E-12 3.9E-17 105.0 8.6 67 92-158 202-274 (299)
84 3aji_A 26S proteasome non-ATPa 99.4 1.9E-12 6.4E-17 100.0 9.5 78 93-170 110-196 (231)
85 3jxi_A Vanilloid receptor-rela 99.4 1.2E-12 4.1E-17 103.1 8.1 77 94-170 145-249 (260)
86 3b7b_A Euchromatic histone-lys 99.4 2.4E-12 8.3E-17 99.7 8.9 62 96-157 151-218 (237)
87 2pnn_A Transient receptor pote 99.3 1.9E-12 6.5E-17 103.0 8.2 78 93-170 152-257 (273)
88 1n11_A Ankyrin; clathrin, BAND 99.3 2.1E-12 7.3E-17 109.0 9.0 73 96-168 21-102 (437)
89 1ikn_D Protein (I-kappa-B-alph 99.3 3.2E-12 1.1E-16 99.5 8.9 78 93-170 82-175 (236)
90 3t8k_A Uncharacterized protein 99.3 5.3E-13 1.8E-17 102.4 4.3 77 95-171 81-179 (186)
91 1wdy_A 2-5A-dependent ribonucl 99.3 5.2E-12 1.8E-16 99.4 9.5 76 94-169 44-128 (285)
92 1n11_A Ankyrin; clathrin, BAND 99.3 2.4E-12 8.1E-17 108.8 8.0 73 96-168 285-366 (437)
93 3kea_A K1L; tropism, ANK repea 99.3 1.6E-12 5.6E-17 105.0 6.5 74 96-169 38-118 (285)
94 3ljn_A Hypothetical protein; a 99.3 2.9E-12 1E-16 105.9 8.1 78 93-170 142-235 (364)
95 4hbd_A KN motif and ankyrin re 99.3 5.7E-12 2E-16 101.4 9.5 75 93-167 115-237 (276)
96 3b7b_A Euchromatic histone-lys 99.3 5.9E-12 2E-16 97.5 9.0 75 95-169 50-134 (237)
97 3lvq_E ARF-GAP with SH3 domain 99.3 6.3E-12 2.2E-16 109.4 10.2 80 87-170 134-231 (497)
98 4g8k_A 2-5A-dependent ribonucl 99.3 7.2E-12 2.5E-16 102.5 9.6 81 85-169 25-148 (337)
99 3hra_A Ankyrin repeat family p 99.3 7.6E-12 2.6E-16 94.6 9.1 74 96-169 79-168 (201)
100 1wdy_A 2-5A-dependent ribonucl 99.3 1.1E-11 3.8E-16 97.5 10.3 75 95-169 11-95 (285)
101 3jue_A Arfgap with coiled-coil 99.3 7.5E-12 2.6E-16 105.9 8.9 78 93-170 203-292 (368)
102 1dcq_A PYK2-associated protein 99.3 2.1E-11 7E-16 98.9 10.7 79 92-170 133-229 (278)
103 3eu9_A Huntingtin-interacting 99.3 2.6E-11 8.7E-16 93.2 9.4 73 96-168 49-131 (240)
104 2b0o_E UPLC1; arfgap, structur 99.2 4.2E-11 1.4E-15 98.1 10.2 81 86-170 152-250 (301)
105 3eu9_A Huntingtin-interacting 99.2 2.1E-11 7.2E-16 93.7 7.2 76 96-171 149-235 (240)
106 4g8k_A 2-5A-dependent ribonucl 99.2 3.9E-11 1.3E-15 98.1 8.5 73 93-170 243-325 (337)
107 1sw6_A Regulatory protein SWI6 99.2 1.9E-11 6.4E-16 100.7 5.6 77 93-169 135-228 (327)
108 2aja_A Ankyrin repeat family p 99.2 1E-11 3.5E-16 105.4 4.0 78 92-169 131-222 (376)
109 1sw6_A Regulatory protein SWI6 99.1 9.2E-11 3.1E-15 96.5 8.2 67 92-158 204-325 (327)
110 2fo1_E LIN-12 protein; beta-ba 99.1 6.3E-11 2.1E-15 99.0 6.8 79 92-170 169-262 (373)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.1 1.6E-10 5.5E-15 77.7 5.6 55 116-170 2-59 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.1 8.9E-11 3E-15 81.7 4.3 59 95-153 48-112 (115)
113 2aja_A Ankyrin repeat family p 99.1 4.9E-11 1.7E-15 101.1 3.1 78 92-170 95-187 (376)
114 2zgd_A 3 repeat synthetic anky 98.8 7.9E-09 2.7E-13 71.7 5.3 55 116-170 24-81 (110)
115 1gp8_A Protein (scaffolding pr 67.4 8.1 0.00028 21.7 3.5 15 95-109 19-33 (40)
116 3zrh_A Ubiquitin thioesterase 32.3 98 0.0033 26.4 6.1 43 95-137 28-90 (454)
No 1
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.68 E-value=2e-16 Score=107.27 Aligned_cols=78 Identities=31% Similarity=0.387 Sum_probs=71.3
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
+|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|.+|.||||+|. +.++++
T Consensus 6 L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~ 85 (93)
T 1n0q_A 6 LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVK 85 (93)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHH
Confidence 45599999999999999999987 449999999999999999999999999999999999999997 478999
Q ss_pred HHHhhhh
Q 030701 164 LILNFSV 170 (173)
Q Consensus 164 lLl~~~~ 170 (173)
+|+++++
T Consensus 86 ~Ll~~ga 92 (93)
T 1n0q_A 86 LLLEAGA 92 (93)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9987753
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.66 E-value=3.4e-16 Score=118.69 Aligned_cols=78 Identities=28% Similarity=0.346 Sum_probs=70.3
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
+++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|+|++.+|.+|+||||+|+ +.++++
T Consensus 74 Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~ 153 (169)
T 4gpm_A 74 LHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVK 153 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 34499999999999999999988 459999999999999999999999999999999999999997 478999
Q ss_pred HHHhhhh
Q 030701 164 LILNFSV 170 (173)
Q Consensus 164 lLl~~~~ 170 (173)
+|+++++
T Consensus 154 ~Ll~~GA 160 (169)
T 4gpm_A 154 LLEKQGG 160 (169)
T ss_dssp HHHTC--
T ss_pred HHHHCCC
Confidence 9998765
No 3
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.59 E-value=5.3e-15 Score=104.79 Aligned_cols=73 Identities=33% Similarity=0.332 Sum_probs=66.3
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCchHHHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPSEEIKDLIL 166 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~~ei~~lLl 166 (173)
|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|.+|.||||+|...++.++|+
T Consensus 45 ~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ll~ 123 (123)
T 3aaa_C 45 HYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123 (123)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHHhC
Confidence 3499999999999999999887 449999999999999999999999999999999999999998888888763
No 4
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.57 E-value=1.3e-14 Score=102.86 Aligned_cols=76 Identities=22% Similarity=0.169 Sum_probs=70.0
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLI 165 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lL 165 (173)
.|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|.+|.||||+|+ +.+++++|
T Consensus 13 ~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~L 92 (123)
T 3aaa_C 13 WALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLL 92 (123)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 399999999999999999887 449999999999999999999999999999999999999997 47899999
Q ss_pred Hhhhh
Q 030701 166 LNFSV 170 (173)
Q Consensus 166 l~~~~ 170 (173)
+++..
T Consensus 93 l~~ga 97 (123)
T 3aaa_C 93 LSKGA 97 (123)
T ss_dssp HHTTC
T ss_pred HHcCC
Confidence 88754
No 5
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.56 E-value=1.5e-14 Score=104.38 Aligned_cols=75 Identities=25% Similarity=0.337 Sum_probs=67.8
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLI 165 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lL 165 (173)
+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|.+|.||||+|. +.+++++|
T Consensus 53 ~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~L 132 (136)
T 2jab_A 53 LATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132 (136)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 499999999999999999887 449999999999999999999999999999999999999997 47899998
Q ss_pred Hhhh
Q 030701 166 LNFS 169 (173)
Q Consensus 166 l~~~ 169 (173)
++++
T Consensus 133 l~~G 136 (136)
T 2jab_A 133 QKLN 136 (136)
T ss_dssp HHC-
T ss_pred HHcC
Confidence 8753
No 6
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.55 E-value=2.7e-14 Score=108.15 Aligned_cols=77 Identities=29% Similarity=0.380 Sum_probs=68.3
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
++|+..|+.++++.|++.|+++ +.||||+|+..|+.+++++|++.|+|+|.+|.+|+||||+|+ +.+++++
T Consensus 42 ~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~ 121 (169)
T 4gpm_A 42 HHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKL 121 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 3499999999999999999887 449999999999999999999999999999999999999997 4789999
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|+++.+
T Consensus 122 Ll~~ga 127 (169)
T 4gpm_A 122 LISKGA 127 (169)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 987654
No 7
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.54 E-value=2.5e-14 Score=100.07 Aligned_cols=78 Identities=26% Similarity=0.345 Sum_probs=68.7
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC
Q 030701 84 DDVEQYFNYMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 84 ~~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~ 157 (173)
+..+.++. |+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+
T Consensus 23 ~g~t~L~~----A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 23 DLGKKLLE----AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp CHHHHHHH----HHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ccchHHHH----HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHH
Confidence 34444555 99999999999999999887 459999999999999999999999999999999999999997
Q ss_pred ---chHHHHHH
Q 030701 158 ---SEEIKDLI 165 (173)
Q Consensus 158 ---~~ei~~lL 165 (173)
+.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 36777766
No 8
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.54 E-value=3e-14 Score=102.75 Aligned_cols=82 Identities=27% Similarity=0.299 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC-
Q 030701 85 DVEQYFNYMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP- 157 (173)
Q Consensus 85 ~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~- 157 (173)
..+.++. |+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+
T Consensus 14 ~~t~l~~----A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 14 LGKKLLE----AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp HHHHHHH----HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccHHHHH----HHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 3344555 99999999999999999887 449999999999999999999999999999999999999997
Q ss_pred --chHHHHHHHhhhh
Q 030701 158 --SEEIKDLILNFSV 170 (173)
Q Consensus 158 --~~ei~~lLl~~~~ 170 (173)
+.+++++|+++..
T Consensus 90 ~~~~~~v~~Ll~~g~ 104 (136)
T 2jab_A 90 IGHLEIAEVLLKHGA 104 (136)
T ss_dssp HTCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHcCC
Confidence 4789999987653
No 9
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.54 E-value=2e-14 Score=103.49 Aligned_cols=74 Identities=26% Similarity=0.262 Sum_probs=62.1
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCchHHHHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPSEEIKDLIL 166 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~~ei~~lLl 166 (173)
+|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|......+++.
T Consensus 47 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~ 126 (137)
T 3c5r_A 47 LHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLL 126 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHS
T ss_pred HHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHh
Confidence 34499999999999999998877 349999999999999999999999999999999999999998765555543
No 10
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.54 E-value=1.9e-14 Score=116.80 Aligned_cols=80 Identities=16% Similarity=0.198 Sum_probs=72.8
Q ss_pred HHHHHHc---CCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chH
Q 030701 93 MGMLAVE---GTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEE 160 (173)
Q Consensus 93 ~~~Aa~~---G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~e 160 (173)
+|+|+.. |+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|||++.+|.+|.||||+|+ +.+
T Consensus 173 Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~ 252 (278)
T 1dcq_A 173 LHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEH 252 (278)
T ss_dssp HHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred chHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHH
Confidence 3459999 8999999999999988 459999999999999999999999999999999999999997 478
Q ss_pred HHHHHHhhhhcc
Q 030701 161 IKDLILNFSVQK 172 (173)
Q Consensus 161 i~~lLl~~~~~~ 172 (173)
++++|+++...+
T Consensus 253 ~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 253 CEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHcCCCC
Confidence 999999887643
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.53 E-value=1.3e-14 Score=117.15 Aligned_cols=75 Identities=25% Similarity=0.197 Sum_probs=66.5
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc-hHHHHH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS-EEIKDL 164 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~-~ei~~l 164 (173)
++++|+..|+.++|++|++.|+++ +.||||+|+..|+.++|++|+++|||++.+|.+|+||||+|+. .+++++
T Consensus 155 pL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~l 234 (269)
T 4b93_B 155 PLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMEL 234 (269)
T ss_dssp HHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHH
Confidence 344599999999999999999988 5599999999999999999999999999999999999999974 566766
Q ss_pred HH
Q 030701 165 IL 166 (173)
Q Consensus 165 Ll 166 (173)
|.
T Consensus 235 L~ 236 (269)
T 4b93_B 235 LQ 236 (269)
T ss_dssp TT
T ss_pred HH
Confidence 64
No 12
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.53 E-value=5.5e-14 Score=103.87 Aligned_cols=76 Identities=28% Similarity=0.279 Sum_probs=67.4
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc--hHHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS--EEIKDLI 165 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~--~ei~~lL 165 (173)
++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|.+|.||||+|.. .+++++|
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~i~~~L 159 (165)
T 3twr_A 80 HNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTDIQDLL 159 (165)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCTTCHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhcCChHHHHHH
Confidence 3499999999999999999887 4499999999999999999999999999999999999999874 6899998
Q ss_pred Hhhh
Q 030701 166 LNFS 169 (173)
Q Consensus 166 l~~~ 169 (173)
++..
T Consensus 160 ~~~g 163 (165)
T 3twr_A 160 RGDA 163 (165)
T ss_dssp HTC-
T ss_pred hhcc
Confidence 8764
No 13
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.52 E-value=1.4e-14 Score=101.29 Aligned_cols=76 Identities=28% Similarity=0.305 Sum_probs=69.7
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLI 165 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lL 165 (173)
+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.+++++|
T Consensus 15 ~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~L 94 (115)
T 2l6b_A 15 NAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLL 94 (115)
T ss_dssp HHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 499999999999999999887 449999999999999999999999999999999999999997 37899999
Q ss_pred Hhhhh
Q 030701 166 LNFSV 170 (173)
Q Consensus 166 l~~~~ 170 (173)
+++++
T Consensus 95 l~~ga 99 (115)
T 2l6b_A 95 DAKGA 99 (115)
T ss_dssp HTTSS
T ss_pred HHcCC
Confidence 87654
No 14
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.52 E-value=5.1e-14 Score=104.03 Aligned_cols=77 Identities=27% Similarity=0.172 Sum_probs=70.5
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.+++++
T Consensus 47 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 126 (165)
T 3twr_A 47 HFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKL 126 (165)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 3499999999999999999987 449999999999999999999999999999999999999997 4789999
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|+++..
T Consensus 127 Ll~~ga 132 (165)
T 3twr_A 127 LLQHGA 132 (165)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 988754
No 15
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.52 E-value=5.5e-14 Score=101.13 Aligned_cols=76 Identities=22% Similarity=0.288 Sum_probs=70.0
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLI 165 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lL 165 (173)
+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.+++++|
T Consensus 16 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 95 (137)
T 3c5r_A 16 IASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLL 95 (137)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 499999999999999999987 449999999999999999999999999999999999999997 47899999
Q ss_pred Hhhhh
Q 030701 166 LNFSV 170 (173)
Q Consensus 166 l~~~~ 170 (173)
+++..
T Consensus 96 l~~ga 100 (137)
T 3c5r_A 96 LSYGA 100 (137)
T ss_dssp HHTTC
T ss_pred HHcCC
Confidence 88754
No 16
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.51 E-value=6.6e-14 Score=105.07 Aligned_cols=75 Identities=20% Similarity=0.276 Sum_probs=46.8
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc---hHHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS---EEIKDLI 165 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~---~ei~~lL 165 (173)
+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|.+|.||||+|.. .+++++|
T Consensus 78 ~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L 157 (179)
T 3f6q_A 78 LAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERA 157 (179)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHH
Confidence 366666666666666666655 2366666666666666666666666666666666666666652 4555555
Q ss_pred Hhhh
Q 030701 166 LNFS 169 (173)
Q Consensus 166 l~~~ 169 (173)
+++.
T Consensus 158 ~~~g 161 (179)
T 3f6q_A 158 EKMG 161 (179)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 5544
No 17
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.51 E-value=6.7e-14 Score=104.07 Aligned_cols=78 Identities=22% Similarity=0.299 Sum_probs=70.3
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|.+|.||||+|. +.+++++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~ 153 (172)
T 3v30_A 74 SLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQV 153 (172)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHH
Confidence 3499999999999999999887 449999999999999999999999999999999999999997 4789999
Q ss_pred HHhhhhc
Q 030701 165 ILNFSVQ 171 (173)
Q Consensus 165 Ll~~~~~ 171 (173)
|+++..+
T Consensus 154 L~~~~~~ 160 (172)
T 3v30_A 154 IENHILK 160 (172)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887653
No 18
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.50 E-value=5.7e-14 Score=102.88 Aligned_cols=74 Identities=32% Similarity=0.429 Sum_probs=49.7
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLIL 166 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl 166 (173)
|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.+++++|+
T Consensus 41 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 120 (153)
T 1awc_B 41 AAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120 (153)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 77777777777777766655 336777777777777777777777777777777777777665 356666666
Q ss_pred hhh
Q 030701 167 NFS 169 (173)
Q Consensus 167 ~~~ 169 (173)
++.
T Consensus 121 ~~g 123 (153)
T 1awc_B 121 KYG 123 (153)
T ss_dssp HTT
T ss_pred HcC
Confidence 553
No 19
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.50 E-value=5.7e-14 Score=111.13 Aligned_cols=79 Identities=22% Similarity=0.195 Sum_probs=71.8
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEI 161 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei 161 (173)
++++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.++
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~ 240 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPIL 240 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHH
Confidence 344599999999999999999987 349999999999999999999999999999999999999997 4789
Q ss_pred HHHHHhhhh
Q 030701 162 KDLILNFSV 170 (173)
Q Consensus 162 ~~lLl~~~~ 170 (173)
+++|+++++
T Consensus 241 v~~Ll~~ga 249 (282)
T 1oy3_D 241 ARLLRAHGA 249 (282)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 999998765
No 20
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.49 E-value=2.1e-14 Score=103.52 Aligned_cols=75 Identities=28% Similarity=0.289 Sum_probs=68.8
Q ss_pred HHHHcCCHHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
+|+. |+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|. +.+++++
T Consensus 51 ~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~ 129 (136)
T 1d9s_A 51 VMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARY 129 (136)
T ss_dssp TSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHH
T ss_pred HHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 3999 9999999999999887 359999999999999999999999999999999999999997 4789999
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|+++++
T Consensus 130 Ll~~Ga 135 (136)
T 1d9s_A 130 LHAATG 135 (136)
T ss_dssp HHHHHC
T ss_pred HHHcCC
Confidence 988764
No 21
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.49 E-value=1.4e-13 Score=96.33 Aligned_cols=76 Identities=32% Similarity=0.391 Sum_probs=69.9
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLI 165 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lL 165 (173)
+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|. +.+++++|
T Consensus 41 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 120 (126)
T 1n0r_A 41 LAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 120 (126)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHH
Confidence 499999999999999999887 449999999999999999999999999999999999999997 47899999
Q ss_pred Hhhhh
Q 030701 166 LNFSV 170 (173)
Q Consensus 166 l~~~~ 170 (173)
+++++
T Consensus 121 l~~Ga 125 (126)
T 1n0r_A 121 LEAGA 125 (126)
T ss_dssp HHHTC
T ss_pred HHcCC
Confidence 88764
No 22
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.49 E-value=1.6e-13 Score=102.90 Aligned_cols=77 Identities=22% Similarity=0.273 Sum_probs=70.6
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.+++++
T Consensus 44 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~ 123 (179)
T 3f6q_A 44 HWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAED 123 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 3499999999999999999988 449999999999999999999999999999999999999997 4789999
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|+++..
T Consensus 124 Ll~~ga 129 (179)
T 3f6q_A 124 LVANGA 129 (179)
T ss_dssp HHHTTC
T ss_pred HHHCCC
Confidence 988754
No 23
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.49 E-value=5.4e-14 Score=110.71 Aligned_cols=74 Identities=15% Similarity=0.108 Sum_probs=38.9
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCC-chhhhcC-----chHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGR-TALERAP-----SEEIKD 163 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~-TpLh~A~-----~~ei~~ 163 (173)
|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|++++.++..|. ||||+|. ..++++
T Consensus 77 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~ 156 (239)
T 1ycs_B 77 AVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 156 (239)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHH
Confidence 55555555555555555544 22555555555555555555555555555554444 5555551 134555
Q ss_pred HHHhhh
Q 030701 164 LILNFS 169 (173)
Q Consensus 164 lLl~~~ 169 (173)
+|+++.
T Consensus 157 ~Ll~~~ 162 (239)
T 1ycs_B 157 FLYGVQ 162 (239)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 555443
No 24
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.48 E-value=2.8e-14 Score=102.85 Aligned_cols=75 Identities=17% Similarity=0.148 Sum_probs=68.9
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCC-CCchhhhcC---chHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDAD-GRTALERAP---SEEIKDL 164 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~-G~TpLh~A~---~~ei~~l 164 (173)
+|+..|+.+++++|++.|+++ +.||||+|+. |+.+++++|++.|++++.+|.. |.||||+|+ +.+++++
T Consensus 18 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 96 (136)
T 1d9s_A 18 TAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVV 96 (136)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHH
Confidence 499999999999999999887 4499999999 9999999999999999999999 999999997 4789999
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|+++..
T Consensus 97 Ll~~ga 102 (136)
T 1d9s_A 97 LHRAGA 102 (136)
T ss_dssp HHHTCC
T ss_pred HHHcCC
Confidence 987653
No 25
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.48 E-value=1.1e-13 Score=102.88 Aligned_cols=77 Identities=21% Similarity=0.191 Sum_probs=70.2
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.+++++
T Consensus 41 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 120 (172)
T 3v30_A 41 IWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEA 120 (172)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 3499999999999999999887 449999999999999999999999999999999999999997 4789999
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|+++..
T Consensus 121 Ll~~ga 126 (172)
T 3v30_A 121 LLARGA 126 (172)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 987653
No 26
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.48 E-value=1.3e-13 Score=101.14 Aligned_cols=77 Identities=27% Similarity=0.280 Sum_probs=69.0
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCC-cccccCCCCchhhhcC---chHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGAS-YTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAd-i~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|. +.++++
T Consensus 75 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 154 (162)
T 1ihb_A 75 HDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVS 154 (162)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 3499999999999999999887 44999999999999999999999998 6999999999999997 478999
Q ss_pred HHHhhhh
Q 030701 164 LILNFSV 170 (173)
Q Consensus 164 lLl~~~~ 170 (173)
+|+++++
T Consensus 155 ~Ll~~GA 161 (162)
T 1ihb_A 155 LMQANGA 161 (162)
T ss_dssp HHHHTC-
T ss_pred HHHHhCC
Confidence 9988764
No 27
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.48 E-value=1.2e-13 Score=108.78 Aligned_cols=78 Identities=19% Similarity=0.185 Sum_probs=62.7
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCccccc-CCCCchhhhc--C---chH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKD-ADGRTALERA--P---SEE 160 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d-~~G~TpLh~A--~---~~e 160 (173)
+++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++..+ .+|.||||+| . +.+
T Consensus 58 Lh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~ 137 (229)
T 2vge_A 58 LHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYAD 137 (229)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHH
Confidence 34488888888888888888877 4488888888888888888888888888876 5888888888 4 367
Q ss_pred HHHHHHhhhh
Q 030701 161 IKDLILNFSV 170 (173)
Q Consensus 161 i~~lLl~~~~ 170 (173)
++++|+++..
T Consensus 138 ~v~~Ll~~ga 147 (229)
T 2vge_A 138 CATYLADVEQ 147 (229)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHcCC
Confidence 8888877654
No 28
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.48 E-value=1.6e-13 Score=102.20 Aligned_cols=74 Identities=27% Similarity=0.377 Sum_probs=56.3
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLI 165 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lL 165 (173)
+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|..|.||||+|. +.+++++|
T Consensus 86 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 165 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHH
Confidence 478888888888888877766 337888888888888888888888888888888888888775 36677777
Q ss_pred Hhh
Q 030701 166 LNF 168 (173)
Q Consensus 166 l~~ 168 (173)
+++
T Consensus 166 ~~~ 168 (169)
T 2y1l_E 166 QKL 168 (169)
T ss_dssp HTC
T ss_pred HHc
Confidence 664
No 29
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.48 E-value=1.6e-13 Score=103.94 Aligned_cols=76 Identities=21% Similarity=0.240 Sum_probs=61.4
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|. +.+++++
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~ 185 (192)
T 2rfm_A 106 MWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKI 185 (192)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHH
Confidence 3488888888888888888776 448888888888888888888888888888888888888886 4678888
Q ss_pred HHhhh
Q 030701 165 ILNFS 169 (173)
Q Consensus 165 Ll~~~ 169 (173)
|+++.
T Consensus 186 Ll~~~ 190 (192)
T 2rfm_A 186 FTEVR 190 (192)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 87765
No 30
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.47 E-value=1.4e-13 Score=101.88 Aligned_cols=77 Identities=18% Similarity=0.259 Sum_probs=65.7
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|.+|.||||+|. +.+++++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 153 (167)
T 3v31_A 74 SLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQV 153 (167)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 3499999999999999988877 448999999999999999999999999999999999999987 4688888
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|+++..
T Consensus 154 L~~~~~ 159 (167)
T 3v31_A 154 IESHLL 159 (167)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887654
No 31
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.47 E-value=2e-13 Score=101.62 Aligned_cols=77 Identities=30% Similarity=0.348 Sum_probs=70.0
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.+++++
T Consensus 52 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 131 (169)
T 2y1l_E 52 HLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEV 131 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 3499999999999999999887 449999999999999999999999999999999999999997 4789999
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|+++..
T Consensus 132 Ll~~g~ 137 (169)
T 2y1l_E 132 LLKNGA 137 (169)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 987653
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.47 E-value=1.7e-13 Score=105.48 Aligned_cols=76 Identities=26% Similarity=0.264 Sum_probs=58.0
Q ss_pred HHHHHHcCCHHHHHHHHHCC-CCC------CCcHHHHHHHcCCHHHHHHHH-HcCCCcccccCCCCchhhhcCchHHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQN-IHP------VDILLMLAASEGDKPKIEELL-RAGASYTVKDADGRTALERAPSEEIKDL 164 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~G-a~~------~dTpLh~Aa~~g~~~~v~~LL-~~GAdi~~~d~~G~TpLh~A~~~ei~~l 164 (173)
+++|+..|+.+++++|++.| +++ +.||||+|+..|+.+++++|+ +.|+|++.+|.+|.||||+|.+.++.++
T Consensus 144 L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 223 (228)
T 2dzn_A 144 LHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKKF 223 (228)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTTHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHHHHHH
Confidence 33488888888888888777 554 448888888888888888888 7788888888888888888877777777
Q ss_pred HHhh
Q 030701 165 ILNF 168 (173)
Q Consensus 165 Ll~~ 168 (173)
|+++
T Consensus 224 l~~~ 227 (228)
T 2dzn_A 224 FLNN 227 (228)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 7765
No 33
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.47 E-value=1.6e-13 Score=106.94 Aligned_cols=78 Identities=18% Similarity=0.204 Sum_probs=69.9
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIK 162 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~ 162 (173)
+|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|..|.||||+|. +.+++
T Consensus 121 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~ 200 (236)
T 1ikn_D 121 LHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQ 200 (236)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHH
Confidence 34599999999999999999887 349999999999999999999999999999999999999997 47899
Q ss_pred HHHHhhhh
Q 030701 163 DLILNFSV 170 (173)
Q Consensus 163 ~lLl~~~~ 170 (173)
++|+++++
T Consensus 201 ~~Ll~~ga 208 (236)
T 1ikn_D 201 QQLGQLTL 208 (236)
T ss_dssp HHHHTTSC
T ss_pred HHHHHcch
Confidence 99988765
No 34
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.47 E-value=1.8e-13 Score=101.30 Aligned_cols=77 Identities=26% Similarity=0.270 Sum_probs=70.2
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++..|..|.||||+|+ +.+++++
T Consensus 41 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 120 (167)
T 3v31_A 41 MWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKM 120 (167)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHH
Confidence 3499999999999999999887 449999999999999999999999999999999999999997 4789999
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|+++..
T Consensus 121 Ll~~g~ 126 (167)
T 3v31_A 121 LLESGA 126 (167)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 987653
No 35
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.47 E-value=1.4e-13 Score=100.74 Aligned_cols=72 Identities=22% Similarity=0.296 Sum_probs=66.1
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|. +.+++++
T Consensus 72 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~ 151 (153)
T 1awc_B 72 HMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEI 151 (153)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 3499999999999999999987 449999999999999999999999999999999999999997 3678877
Q ss_pred H
Q 030701 165 I 165 (173)
Q Consensus 165 L 165 (173)
|
T Consensus 152 L 152 (153)
T 1awc_B 152 L 152 (153)
T ss_dssp H
T ss_pred h
Confidence 6
No 36
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.47 E-value=1.3e-13 Score=106.86 Aligned_cols=63 Identities=29% Similarity=0.329 Sum_probs=30.8
Q ss_pred HHHcCCHHHHHHHHHC-CCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc
Q 030701 96 LAVEGTYDKMEALLSQ-NIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS 158 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~-Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~ 158 (173)
|+..|+.+++++|++. |+++ +.||||+|+..|+.+++++|+++|++++.+|.+|.||||+|..
T Consensus 113 A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 182 (222)
T 3ehr_A 113 ACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATN 182 (222)
T ss_dssp HHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCS
T ss_pred HHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcc
Confidence 5555555555555544 4443 2245555555555555555555555555555555555555543
No 37
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.46 E-value=1.7e-13 Score=106.11 Aligned_cols=79 Identities=22% Similarity=0.225 Sum_probs=71.6
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCchhhhcC---chHH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRA-GASYTVKDADGRTALERAP---SEEI 161 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~-GAdi~~~d~~G~TpLh~A~---~~ei 161 (173)
++++|+..|+.++++.|++.|+++ +.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+ +.++
T Consensus 76 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~ 155 (222)
T 3ehr_A 76 PLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADI 155 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHH
T ss_pred ccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHH
Confidence 344599999999999999999887 44999999999999999999998 9999999999999999997 4789
Q ss_pred HHHHHhhhh
Q 030701 162 KDLILNFSV 170 (173)
Q Consensus 162 ~~lLl~~~~ 170 (173)
+++|+++.+
T Consensus 156 v~~Ll~~ga 164 (222)
T 3ehr_A 156 VQLLLAKGA 164 (222)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHcCC
Confidence 999988754
No 38
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.46 E-value=3.1e-13 Score=104.40 Aligned_cols=78 Identities=23% Similarity=0.213 Sum_probs=63.4
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
+++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|.+|.||||+|. +.++++
T Consensus 143 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~ 222 (231)
T 3aji_A 143 MHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKR 222 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHH
Confidence 34588888888888888888776 448888888888888888888888888888888888888886 367888
Q ss_pred HHHhhhh
Q 030701 164 LILNFSV 170 (173)
Q Consensus 164 lLl~~~~ 170 (173)
+|+++..
T Consensus 223 lL~~~~a 229 (231)
T 3aji_A 223 LAEGEEA 229 (231)
T ss_dssp HHHHHHH
T ss_pred HHccccc
Confidence 8877654
No 39
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.45 E-value=2.4e-13 Score=99.32 Aligned_cols=74 Identities=23% Similarity=0.301 Sum_probs=66.8
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++. ++++.+|.+|.||||+|. +.+++++
T Consensus 73 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~ 151 (156)
T 1bd8_A 73 HDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDI 151 (156)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 3499999999999999999887 44999999999999999999988 999999999999999997 4789998
Q ss_pred HHhh
Q 030701 165 ILNF 168 (173)
Q Consensus 165 Ll~~ 168 (173)
|+++
T Consensus 152 Ll~~ 155 (156)
T 1bd8_A 152 LQGH 155 (156)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 8765
No 40
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.45 E-value=2.1e-13 Score=103.20 Aligned_cols=77 Identities=23% Similarity=0.175 Sum_probs=70.2
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.+++++
T Consensus 73 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 152 (192)
T 2rfm_A 73 IWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKK 152 (192)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 3499999999999999999887 459999999999999999999999999999999999999997 4789999
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|+++..
T Consensus 153 Ll~~ga 158 (192)
T 2rfm_A 153 LLELGA 158 (192)
T ss_dssp HHHTTC
T ss_pred HHHCCC
Confidence 987653
No 41
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.45 E-value=1.9e-13 Score=112.18 Aligned_cols=79 Identities=18% Similarity=0.172 Sum_probs=71.4
Q ss_pred HHHHHHc---CCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chH
Q 030701 93 MGMLAVE---GTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEE 160 (173)
Q Consensus 93 ~~~Aa~~---G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~e 160 (173)
+|+|+.. |+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|+|++.+|.+|.||||+|+ +.+
T Consensus 194 Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~ 273 (301)
T 2b0o_E 194 LHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 273 (301)
T ss_dssp HHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 4459987 8999999999999987 459999999999999999999999999999999999999997 478
Q ss_pred HHHHHHhhhhc
Q 030701 161 IKDLILNFSVQ 171 (173)
Q Consensus 161 i~~lLl~~~~~ 171 (173)
++++|+++...
T Consensus 274 iv~~Ll~~ga~ 284 (301)
T 2b0o_E 274 CEELLEQAQAG 284 (301)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhcCC
Confidence 99999987653
No 42
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.45 E-value=2.2e-13 Score=103.00 Aligned_cols=72 Identities=24% Similarity=0.300 Sum_probs=37.8
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCccccc-CCCCchhhhcC---chHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKD-ADGRTALERAP---SEEIKDLI 165 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d-~~G~TpLh~A~---~~ei~~lL 165 (173)
|+..|+.++++.|++ |+++ +.||||+|+..|+.+++++|++.|++++.++ .+|.||||+|+ +.+++++|
T Consensus 51 A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~L 129 (183)
T 3deo_A 51 AARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 129 (183)
T ss_dssp HHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHH
Confidence 555555555555555 4443 2255555555555555555555555555554 45555555554 24455555
Q ss_pred Hhh
Q 030701 166 LNF 168 (173)
Q Consensus 166 l~~ 168 (173)
+++
T Consensus 130 l~~ 132 (183)
T 3deo_A 130 VEL 132 (183)
T ss_dssp HHH
T ss_pred HHc
Confidence 443
No 43
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.45 E-value=2.4e-13 Score=109.55 Aligned_cols=78 Identities=27% Similarity=0.292 Sum_probs=70.8
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHH-cCCCcccccCCCCchhhhcC---chHH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLR-AGASYTVKDADGRTALERAP---SEEI 161 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~-~GAdi~~~d~~G~TpLh~A~---~~ei 161 (173)
++++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++ .|+|++.+|.+|.||||+|+ +.++
T Consensus 186 pLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~i 265 (276)
T 4hbd_A 186 ALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEI 265 (276)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHH
Confidence 445699999999999999999988 4499999999999999999998 89999999999999999997 4789
Q ss_pred HHHHHhhh
Q 030701 162 KDLILNFS 169 (173)
Q Consensus 162 ~~lLl~~~ 169 (173)
+++|++..
T Consensus 266 v~~Ll~~~ 273 (276)
T 4hbd_A 266 ASMLYSRM 273 (276)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcc
Confidence 99988754
No 44
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.45 E-value=2.9e-13 Score=94.64 Aligned_cols=78 Identities=31% Similarity=0.387 Sum_probs=70.2
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
++.|+..|+.+++++|++.|+++ +.||||+|+..++.+++++|++.|++++.+|..|.||||+|+ +.++++
T Consensus 6 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 85 (126)
T 1n0r_A 6 LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVK 85 (126)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHH
Confidence 34599999999999999999877 449999999999999999999999999999999999999997 478999
Q ss_pred HHHhhhh
Q 030701 164 LILNFSV 170 (173)
Q Consensus 164 lLl~~~~ 170 (173)
+|+++..
T Consensus 86 ~Ll~~g~ 92 (126)
T 1n0r_A 86 LLLEAGA 92 (126)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9887643
No 45
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.45 E-value=2.5e-13 Score=99.24 Aligned_cols=76 Identities=20% Similarity=0.183 Sum_probs=68.8
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIK 162 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~ 162 (173)
++++ +..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|.+|.||||+|+ +.+++
T Consensus 39 ~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 117 (156)
T 1bd8_A 39 ALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVV 117 (156)
T ss_dssp HHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHH
Confidence 3456 8899999999999999987 449999999999999999999999999999999999999997 47888
Q ss_pred HHHHhh
Q 030701 163 DLILNF 168 (173)
Q Consensus 163 ~lLl~~ 168 (173)
++|+++
T Consensus 118 ~~Ll~~ 123 (156)
T 1bd8_A 118 SFLAAE 123 (156)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 888865
No 46
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.44 E-value=4e-13 Score=103.29 Aligned_cols=79 Identities=23% Similarity=0.236 Sum_probs=59.1
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
+++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|..|.||||+|. +.++++
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~ 208 (223)
T 2f8y_A 129 LHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVR 208 (223)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHH
Confidence 34477788888888888777776 347888888888888888888888888877778888888776 367777
Q ss_pred HHHhhhhc
Q 030701 164 LILNFSVQ 171 (173)
Q Consensus 164 lLl~~~~~ 171 (173)
+|+++...
T Consensus 209 ~L~~~g~~ 216 (223)
T 2f8y_A 209 LLDEYNLV 216 (223)
T ss_dssp HHHHTTCS
T ss_pred HHHHcCCC
Confidence 77776653
No 47
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.44 E-value=5.4e-14 Score=103.62 Aligned_cols=74 Identities=27% Similarity=0.274 Sum_probs=66.6
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCc-HHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDI-LLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLI 165 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dT-pLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lL 165 (173)
| ..|+.+++++|++.|+++ +.| |||+|+..|+.+++++|+++|++++.+|..|.||||+|+ +.+++++|
T Consensus 52 A-~~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~L 130 (156)
T 1bi7_B 52 M-MMGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130 (156)
T ss_dssp S-CTTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred H-HcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHH
Confidence 6 499999999999999987 447 999999999999999999999999999999999999997 47899999
Q ss_pred Hhhhh
Q 030701 166 LNFSV 170 (173)
Q Consensus 166 l~~~~ 170 (173)
+++..
T Consensus 131 l~~ga 135 (156)
T 1bi7_B 131 RAAAG 135 (156)
T ss_dssp SSCC-
T ss_pred HHcCC
Confidence 87654
No 48
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.44 E-value=3.7e-13 Score=104.30 Aligned_cols=71 Identities=23% Similarity=0.302 Sum_probs=44.4
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCchHHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPSEEIKDLI 165 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~~ei~~lL 165 (173)
+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|+|++.+|..|.||||+|......+++
T Consensus 156 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~ 232 (241)
T 1k1a_A 156 HAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 232 (241)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHH
Confidence 366666666666666666655 33666666666666666666666666666666666666666654333333
No 49
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.44 E-value=3.8e-13 Score=106.06 Aligned_cols=77 Identities=19% Similarity=0.198 Sum_probs=68.9
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC--C------------------CcHHHHHHHcCCHHHHHHHHH---cCCCcccccCCCC
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP--V------------------DILLMLAASEGDKPKIEELLR---AGASYTVKDADGR 150 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~--~------------------dTpLh~Aa~~g~~~~v~~LL~---~GAdi~~~d~~G~ 150 (173)
|+|+..|+.++|++|++.|+++ . .||||+|+..|+.+++++|++ .|++++.+|.+|+
T Consensus 98 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~ 177 (260)
T 3jxi_A 98 HIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGN 177 (260)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred HHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCC
Confidence 3499999999999999999887 2 299999999999999999999 9999999999999
Q ss_pred chhhhcCc------------hHHHHHHHhhhh
Q 030701 151 TALERAPS------------EEIKDLILNFSV 170 (173)
Q Consensus 151 TpLh~A~~------------~ei~~lLl~~~~ 170 (173)
||||+|+. .+++++|++++.
T Consensus 178 TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga 209 (260)
T 3jxi_A 178 TVLHALVAIADNTRENTKFVTKMYDLLLIKCA 209 (260)
T ss_dssp CHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhccCchhHHHHHHHHHHHHHHhCc
Confidence 99999982 378888887754
No 50
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.44 E-value=4.5e-13 Score=105.55 Aligned_cols=84 Identities=18% Similarity=0.200 Sum_probs=74.0
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhc
Q 030701 83 RDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERA 156 (173)
Q Consensus 83 ~~~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A 156 (173)
.+..+.++. |+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|
T Consensus 19 ~~~~t~L~~----A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A 94 (229)
T 2vge_A 19 LNPLVLLLD----AALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCA 94 (229)
T ss_dssp SCHHHHHHH----HHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cchhHHHHH----HHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 344444555 99999999999999999887 44999999999999999999999999999999999999999
Q ss_pred C---chHHHHHHHhhhh
Q 030701 157 P---SEEIKDLILNFSV 170 (173)
Q Consensus 157 ~---~~ei~~lLl~~~~ 170 (173)
+ +.+++++|+++..
T Consensus 95 ~~~g~~~~v~~Ll~~ga 111 (229)
T 2vge_A 95 ASCNDTVICMALVQHGA 111 (229)
T ss_dssp HHTTCHHHHHHHHTTTC
T ss_pred HHcCCHHHHHHHHHcCC
Confidence 7 4789999987653
No 51
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.44 E-value=2.1e-13 Score=109.20 Aligned_cols=73 Identities=18% Similarity=0.217 Sum_probs=43.7
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLIL 166 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl 166 (173)
|+..|+.++|++|++.|+++ +.||||+|+..|+.+++++|++.|++++..|..|.||||+|+ +.+++++|+
T Consensus 47 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 126 (299)
T 1s70_B 47 ACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLI 126 (299)
T ss_dssp HHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 66666666666666666554 236666666666666666666666666666666666666664 245555555
Q ss_pred hh
Q 030701 167 NF 168 (173)
Q Consensus 167 ~~ 168 (173)
++
T Consensus 127 ~~ 128 (299)
T 1s70_B 127 SQ 128 (299)
T ss_dssp HT
T ss_pred hC
Confidence 44
No 52
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.44 E-value=1.7e-13 Score=119.41 Aligned_cols=78 Identities=18% Similarity=0.194 Sum_probs=70.6
Q ss_pred HHHHHH---cCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chH
Q 030701 93 MGMLAV---EGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEE 160 (173)
Q Consensus 93 ~~~Aa~---~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~e 160 (173)
+|+|+. .|+.++|++||+.|+++ +.||||+|+..|+.+++++|+++|||++.+|.+|.||||+|+ +.+
T Consensus 175 Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 254 (497)
T 3lvq_E 175 LHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 254 (497)
T ss_dssp HHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 344855 99999999999999988 559999999999999999999999999999999999999997 478
Q ss_pred HHHHHHhhhh
Q 030701 161 IKDLILNFSV 170 (173)
Q Consensus 161 i~~lLl~~~~ 170 (173)
++++|+++++
T Consensus 255 ~~~~Ll~~ga 264 (497)
T 3lvq_E 255 CEELLEQAQA 264 (497)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHHhCC
Confidence 9999988764
No 53
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.44 E-value=2e-13 Score=100.13 Aligned_cols=75 Identities=19% Similarity=0.288 Sum_probs=68.4
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLI 165 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lL 165 (173)
+|+. |+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|.+|.||||+|+ +.+++++|
T Consensus 44 ~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 122 (162)
T 1ihb_A 44 VMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122 (162)
T ss_dssp HCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3777 9999999999999887 449999999999999999999999999999999999999997 47899999
Q ss_pred Hhhhh
Q 030701 166 LNFSV 170 (173)
Q Consensus 166 l~~~~ 170 (173)
+++..
T Consensus 123 l~~g~ 127 (162)
T 1ihb_A 123 VKHTA 127 (162)
T ss_dssp HHHSC
T ss_pred HHccC
Confidence 87654
No 54
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.43 E-value=2.8e-13 Score=103.90 Aligned_cols=76 Identities=12% Similarity=0.045 Sum_probs=61.6
Q ss_pred HHHHHHHcCCH----HHHHHHHHCCCCC------CCcHHHHHHHcCC------HHHHHHHHHcCCCcccccCCCC-chhh
Q 030701 92 YMGMLAVEGTY----DKMEALLSQNIHP------VDILLMLAASEGD------KPKIEELLRAGASYTVKDADGR-TALE 154 (173)
Q Consensus 92 ~~~~Aa~~G~~----~~v~~LL~~Ga~~------~dTpLh~Aa~~g~------~~~v~~LL~~GAdi~~~d~~G~-TpLh 154 (173)
++|+|+..|+. +++++||+.|+++ +.||||+|+..++ .+++++|+++|||+|.+|.+|. ||||
T Consensus 41 ~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh 120 (186)
T 3t8k_A 41 ILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFK 120 (186)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTG
T ss_pred HHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHH
Confidence 34458888875 4899999999988 4499999998886 5788999999999999999999 9999
Q ss_pred hcCc--------hHHHHHHHh
Q 030701 155 RAPS--------EEIKDLILN 167 (173)
Q Consensus 155 ~A~~--------~ei~~lLl~ 167 (173)
+|.. .+++++|++
T Consensus 121 ~A~~~~~~~~~~~~iv~~Ll~ 141 (186)
T 3t8k_A 121 NIFNYFVDENEMIPLYKLIFS 141 (186)
T ss_dssp GGGGCCSCHHHHHHHHHHHHT
T ss_pred HHHHcCCChhhHHHHHHHHHH
Confidence 9874 247777776
No 55
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.43 E-value=3.7e-13 Score=101.70 Aligned_cols=65 Identities=28% Similarity=0.210 Sum_probs=60.5
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~ 157 (173)
+|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|.+|.||||+|.
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 151 (183)
T 3deo_A 80 LLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAR 151 (183)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHH
Confidence 33499999999999999999987 339999999999999999999999999999999999999996
No 56
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.43 E-value=1.2e-13 Score=101.76 Aligned_cols=76 Identities=20% Similarity=0.179 Sum_probs=68.6
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCc-hhhhcC---chHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRT-ALERAP---SEEIKD 163 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~T-pLh~A~---~~ei~~ 163 (173)
++|+..|+.+++++|++.|+++ +.||||+|+ .|+.+++++|++.|++++.+|..|.| |||+|+ +.++++
T Consensus 17 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~ 95 (156)
T 1bi7_B 17 ATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLV 95 (156)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHH
Confidence 3499999999999999999887 459999985 99999999999999999999999999 999997 478999
Q ss_pred HHHhhhh
Q 030701 164 LILNFSV 170 (173)
Q Consensus 164 lLl~~~~ 170 (173)
+|+++..
T Consensus 96 ~Ll~~ga 102 (156)
T 1bi7_B 96 VLHRAGA 102 (156)
T ss_dssp HHHHHTC
T ss_pred HHHHcCC
Confidence 9988753
No 57
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.43 E-value=6.1e-13 Score=104.76 Aligned_cols=78 Identities=21% Similarity=0.204 Sum_probs=69.3
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC-------------------CCcHHHHHHHcCCHHHHHHHHH---cCCCcccccCCCC
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP-------------------VDILLMLAASEGDKPKIEELLR---AGASYTVKDADGR 150 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~-------------------~dTpLh~Aa~~g~~~~v~~LL~---~GAdi~~~d~~G~ 150 (173)
+|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++ .|++++.+|.+|+
T Consensus 94 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~ 173 (256)
T 2etb_A 94 LHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGN 173 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCC
Confidence 33499999999999999999987 2399999999999999999999 9999999999999
Q ss_pred chhhhcCc-----hH-------HHHHHHhhhh
Q 030701 151 TALERAPS-----EE-------IKDLILNFSV 170 (173)
Q Consensus 151 TpLh~A~~-----~e-------i~~lLl~~~~ 170 (173)
||||+|+. .+ ++++|++++.
T Consensus 174 TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga 205 (256)
T 2etb_A 174 TVLHALVMIADNSPENSALVIHMYDGLLQMGA 205 (256)
T ss_dssp CHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHcccCCchhhHHHHHHHHHHHHcCC
Confidence 99999862 44 8899887754
No 58
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.42 E-value=4.9e-13 Score=106.23 Aligned_cols=72 Identities=28% Similarity=0.197 Sum_probs=33.9
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLIL 166 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl 166 (173)
|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|.+|.||||+|+ +.+++++|+
T Consensus 10 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (261)
T 2xai_A 10 AAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLL 89 (261)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 44444444444444444443 224444444444444444444444444444444444444443 234444444
Q ss_pred h
Q 030701 167 N 167 (173)
Q Consensus 167 ~ 167 (173)
+
T Consensus 90 ~ 90 (261)
T 2xai_A 90 Q 90 (261)
T ss_dssp H
T ss_pred H
Confidence 3
No 59
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.42 E-value=3.3e-13 Score=108.83 Aligned_cols=77 Identities=27% Similarity=0.402 Sum_probs=68.7
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
++|+..++.++++.|++.|+++ +.||||+|+..|+.+++++|++.|+|++.++..|.||||+|+ +.+++++
T Consensus 124 ~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~ 203 (269)
T 4b93_B 124 HLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVEL 203 (269)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred ccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHH
Confidence 3488999999999999999887 449999999999999999999999999999999999999997 4789999
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|+++++
T Consensus 204 Ll~~Ga 209 (269)
T 4b93_B 204 LLLHGA 209 (269)
T ss_dssp HHHTTC
T ss_pred HHHCCC
Confidence 988754
No 60
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.42 E-value=3.2e-13 Score=106.98 Aligned_cols=62 Identities=29% Similarity=0.220 Sum_probs=34.7
Q ss_pred HHHcCCHHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC
Q 030701 96 LAVEGTYDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~ 157 (173)
|+..|+.++|++|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 84 A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~ 152 (244)
T 3ui2_A 84 VAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAR 152 (244)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred HHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 55555555555555555554 225555555555555555555555555555555555555553
No 61
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.41 E-value=5.1e-13 Score=105.09 Aligned_cols=76 Identities=20% Similarity=0.289 Sum_probs=70.2
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLI 165 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lL 165 (173)
.|+..|+.++++.|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|.+|.||||+|+ +.+++++|
T Consensus 43 ~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~L 122 (239)
T 1ycs_B 43 DSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFL 122 (239)
T ss_dssp HHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 499999999999999999887 449999999999999999999999999999999999999997 47899999
Q ss_pred Hhhhh
Q 030701 166 LNFSV 170 (173)
Q Consensus 166 l~~~~ 170 (173)
+++..
T Consensus 123 l~~ga 127 (239)
T 1ycs_B 123 VESGA 127 (239)
T ss_dssp HHTTC
T ss_pred HHcCC
Confidence 88754
No 62
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.41 E-value=5.5e-13 Score=112.93 Aligned_cols=78 Identities=21% Similarity=0.156 Sum_probs=67.8
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
+|+|+..|+.++|++|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|.+|.||||+|. +.++++
T Consensus 239 Lh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~ 318 (368)
T 3jue_A 239 LIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVT 318 (368)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHH
Confidence 33499999999999999999887 449999999999999999999999999999999999999986 478888
Q ss_pred HHHhhhh
Q 030701 164 LILNFSV 170 (173)
Q Consensus 164 lLl~~~~ 170 (173)
+|+.+..
T Consensus 319 lLl~~~~ 325 (368)
T 3jue_A 319 LLRLAKM 325 (368)
T ss_dssp HHHHHHC
T ss_pred HHHHcCC
Confidence 8887653
No 63
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.41 E-value=6.4e-13 Score=105.23 Aligned_cols=78 Identities=22% Similarity=0.242 Sum_probs=69.7
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCccccc-CCCCchhhhcC---chHH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKD-ADGRTALERAP---SEEI 161 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d-~~G~TpLh~A~---~~ei 161 (173)
+++.|+..|+.++++.|++ |+++ +.||||+|+..|+.+++++|++.|++++.++ ..|.||||+|+ +.++
T Consensus 48 ~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~ 126 (244)
T 3ui2_A 48 PWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEV 126 (244)
T ss_dssp HHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHH
Confidence 3445999999999999999 8877 4599999999999999999999999999998 78999999997 4789
Q ss_pred HHHHHhhhh
Q 030701 162 KDLILNFSV 170 (173)
Q Consensus 162 ~~lLl~~~~ 170 (173)
+++|+++..
T Consensus 127 v~~Ll~~ga 135 (244)
T 3ui2_A 127 VEALVELGA 135 (244)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHCCC
Confidence 999988753
No 64
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.41 E-value=7.4e-13 Score=105.37 Aligned_cols=77 Identities=18% Similarity=0.167 Sum_probs=68.9
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC----C--------------C--cHHHHHHHcCCHHHHHHHHH---cCCCcccccCCCC
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP----V--------------D--ILLMLAASEGDKPKIEELLR---AGASYTVKDADGR 150 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~----~--------------d--TpLh~Aa~~g~~~~v~~LL~---~GAdi~~~d~~G~ 150 (173)
++|+..|+.+++++|++.|+++ . + ||||+|+..|+.+++++|++ .|++++.+|.+|+
T Consensus 106 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~ 185 (273)
T 2pnn_A 106 HIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGN 185 (273)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred HHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCC
Confidence 3499999999999999999987 2 2 99999999999999999999 9999999999999
Q ss_pred chhhhcCc------------hHHHHHHHhhhh
Q 030701 151 TALERAPS------------EEIKDLILNFSV 170 (173)
Q Consensus 151 TpLh~A~~------------~ei~~lLl~~~~ 170 (173)
||||+|+. .+++++|+++..
T Consensus 186 tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga 217 (273)
T 2pnn_A 186 TVLHALVEVADNTVDNTKFVTSMYNEILILGA 217 (273)
T ss_dssp CHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHccCcchhHHHHHHHHHHHHHHhhh
Confidence 99999973 578888887653
No 65
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.40 E-value=5.7e-13 Score=100.86 Aligned_cols=75 Identities=25% Similarity=0.330 Sum_probs=57.7
Q ss_pred HHHHHcCCHHHHHHHHHCC-CCC------CCcHHHHHHHcCC-----HHHHHHHHHcCCCcccccCCCCchhhhcC---c
Q 030701 94 GMLAVEGTYDKMEALLSQN-IHP------VDILLMLAASEGD-----KPKIEELLRAGASYTVKDADGRTALERAP---S 158 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~G-a~~------~dTpLh~Aa~~g~-----~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~ 158 (173)
++|+..|+.+++++|++.| +++ +.||||+|+..+. .+++++|++.|++++.+|..|.||||+|. +
T Consensus 111 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 190 (201)
T 3hra_A 111 IPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGY 190 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC
Confidence 3488888888888888877 554 4488888887776 78888888888888888888888888886 3
Q ss_pred hHHHHHHHhh
Q 030701 159 EEIKDLILNF 168 (173)
Q Consensus 159 ~ei~~lLl~~ 168 (173)
.+++++|+++
T Consensus 191 ~~~~~~Ll~~ 200 (201)
T 3hra_A 191 TEISKILAQY 200 (201)
T ss_dssp HHHHHHHHTC
T ss_pred HhHHHHHHhc
Confidence 6777777765
No 66
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.40 E-value=1e-12 Score=106.65 Aligned_cols=78 Identities=24% Similarity=0.174 Sum_probs=70.3
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
+|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++..|..|.||||+|+ +.++++
T Consensus 62 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 141 (351)
T 3utm_A 62 LHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCS 141 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 33499999999999999999987 449999999999999999999999999999999999999997 478999
Q ss_pred HHHhhhh
Q 030701 164 LILNFSV 170 (173)
Q Consensus 164 lLl~~~~ 170 (173)
+|+++..
T Consensus 142 ~Ll~~g~ 148 (351)
T 3utm_A 142 LLLSHGA 148 (351)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9887653
No 67
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.40 E-value=1.1e-12 Score=100.83 Aligned_cols=78 Identities=21% Similarity=0.168 Sum_probs=68.8
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
+++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.++++
T Consensus 96 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 175 (223)
T 2f8y_A 96 LILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAK 175 (223)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHH
Confidence 33499999999999999999887 449999999999999999999999999999999999999997 478888
Q ss_pred HHHhhhh
Q 030701 164 LILNFSV 170 (173)
Q Consensus 164 lLl~~~~ 170 (173)
+|+++..
T Consensus 176 ~Ll~~ga 182 (223)
T 2f8y_A 176 VLLDHFA 182 (223)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 8887754
No 68
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.40 E-value=1.1e-12 Score=101.56 Aligned_cols=78 Identities=21% Similarity=0.295 Sum_probs=68.2
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC-------------------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchh
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP-------------------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTAL 153 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~-------------------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpL 153 (173)
+++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|+|++.+|.+|.|||
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L 158 (232)
T 2rfa_A 79 LHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVL 158 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 33499999999999999999886 23999999999999999999999999999999999999
Q ss_pred hhcCc---hHHH----HHHHhhhh
Q 030701 154 ERAPS---EEIK----DLILNFSV 170 (173)
Q Consensus 154 h~A~~---~ei~----~lLl~~~~ 170 (173)
|+|+. .+++ ++|+++..
T Consensus 159 ~~A~~~~~~~~~~~i~~~Ll~~g~ 182 (232)
T 2rfa_A 159 HILILQPNKTFACQMYNLLLSYDG 182 (232)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCChHHHHHHHHHHHhcCC
Confidence 99973 4554 88877654
No 69
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.40 E-value=1.4e-12 Score=105.30 Aligned_cols=77 Identities=18% Similarity=0.201 Sum_probs=63.1
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-----CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC-chHHHHHH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP-----VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP-SEEIKDLI 165 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~-----~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~-~~ei~~lL 165 (173)
++++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|+|++.+|.+|+||||+|. +.+++++|
T Consensus 193 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~L 272 (285)
T 3d9h_A 193 PLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQLF 272 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTSHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcCccHHHHHH
Confidence 345588888888888888888876 448888888888888888888888888888888888888887 46778887
Q ss_pred Hhh
Q 030701 166 LNF 168 (173)
Q Consensus 166 l~~ 168 (173)
+++
T Consensus 273 l~~ 275 (285)
T 3d9h_A 273 LER 275 (285)
T ss_dssp HHH
T ss_pred HHh
Confidence 766
No 70
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.40 E-value=5.2e-13 Score=105.46 Aligned_cols=73 Identities=22% Similarity=0.187 Sum_probs=39.5
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLIL 166 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl 166 (173)
|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.+++++|+
T Consensus 131 A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 210 (253)
T 1yyh_A 131 AARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLL 210 (253)
T ss_dssp HHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 55555555555555555544 235555555555555555555555555555555555555554 245555555
Q ss_pred hh
Q 030701 167 NF 168 (173)
Q Consensus 167 ~~ 168 (173)
++
T Consensus 211 ~~ 212 (253)
T 1yyh_A 211 DH 212 (253)
T ss_dssp HT
T ss_pred Hc
Confidence 44
No 71
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.40 E-value=8.1e-13 Score=104.34 Aligned_cols=78 Identities=23% Similarity=0.169 Sum_probs=69.6
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIK 162 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~ 162 (173)
++++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|..|.||||+|. +.+|+
T Consensus 160 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~ 239 (253)
T 1yyh_A 160 ALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV 239 (253)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHH
Confidence 345699999999999999999987 459999999999999999999999999999999999999997 47888
Q ss_pred HHHHhhh
Q 030701 163 DLILNFS 169 (173)
Q Consensus 163 ~lLl~~~ 169 (173)
++|..+.
T Consensus 240 ~~l~~~~ 246 (253)
T 1yyh_A 240 RLLDLEH 246 (253)
T ss_dssp HHHHC--
T ss_pred HHHHHHh
Confidence 8887643
No 72
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.39 E-value=1.1e-12 Score=100.92 Aligned_cols=76 Identities=22% Similarity=0.220 Sum_probs=63.4
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcC-CCcccccCCCCchhhhcC---chHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAG-ASYTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~G-Adi~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+ +.++++
T Consensus 112 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~ 191 (228)
T 2dzn_A 112 HLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAV 191 (228)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 3488889999999999888877 448999999999999999999888 889988999999999886 467888
Q ss_pred HHH-hhh
Q 030701 164 LIL-NFS 169 (173)
Q Consensus 164 lLl-~~~ 169 (173)
+|+ ++.
T Consensus 192 ~Ll~~~g 198 (228)
T 2dzn_A 192 LLVEKYG 198 (228)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 877 544
No 73
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.39 E-value=4.9e-13 Score=110.57 Aligned_cols=77 Identities=8% Similarity=-0.019 Sum_probs=67.2
Q ss_pred HHHHHHcCCHHHHHHHHHCCCC-----C------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---c
Q 030701 93 MGMLAVEGTYDKMEALLSQNIH-----P------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---S 158 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~-----~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~ 158 (173)
+++|+..|+.+++++|++.|++ + +.||||+|+..|+.+++++|+++|+|++.+|.+|.||||+|+ +
T Consensus 177 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~ 256 (364)
T 3ljn_A 177 LMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAM 256 (364)
T ss_dssp HHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCC
T ss_pred HHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhCh
Confidence 3449999999999999998877 4 449999999999999999999999999999999999999997 4
Q ss_pred hHHHHHHHhhh
Q 030701 159 EEIKDLILNFS 169 (173)
Q Consensus 159 ~ei~~lLl~~~ 169 (173)
.+++++|+++.
T Consensus 257 ~~~v~~Ll~~~ 267 (364)
T 3ljn_A 257 VLLTKELLQKT 267 (364)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHcC
Confidence 78888888764
No 74
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.39 E-value=9.2e-13 Score=104.63 Aligned_cols=76 Identities=20% Similarity=0.228 Sum_probs=62.1
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC-----CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc-hHHHHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP-----VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS-EEIKDLIL 166 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~-----~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~-~ei~~lLl 166 (173)
+++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|+|++.+|.+|+||||+|.. .+++++|+
T Consensus 138 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~~~~~~ll 217 (261)
T 2xai_A 138 LYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQLFL 217 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTCTHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccccHHHHHH
Confidence 34588888888888888888877 4488888888888888888888888888888888888888873 56777776
Q ss_pred hh
Q 030701 167 NF 168 (173)
Q Consensus 167 ~~ 168 (173)
++
T Consensus 218 ~~ 219 (261)
T 2xai_A 218 ER 219 (261)
T ss_dssp HC
T ss_pred hc
Confidence 65
No 75
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.39 E-value=4.8e-13 Score=108.10 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=35.8
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCC-CchhhhcC---chHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADG-RTALERAP---SEEIKDLI 165 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G-~TpLh~A~---~~ei~~lL 165 (173)
|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.++..| .||||+|+ +.+++++|
T Consensus 69 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~L 148 (285)
T 3kea_A 69 AATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYF 148 (285)
T ss_dssp HTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 55555555555555555444 2255555555555555555555555555555544 45555543 23444444
Q ss_pred Hhh
Q 030701 166 LNF 168 (173)
Q Consensus 166 l~~ 168 (173)
+++
T Consensus 149 l~~ 151 (285)
T 3kea_A 149 LSE 151 (285)
T ss_dssp HTT
T ss_pred HhC
Confidence 443
No 76
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.39 E-value=1.4e-12 Score=100.97 Aligned_cols=78 Identities=15% Similarity=0.164 Sum_probs=70.0
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIK 162 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~ 162 (173)
+++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.+++
T Consensus 120 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 199 (241)
T 1k1a_A 120 LHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLV 199 (241)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 34599999999999999999887 349999999999999999999999999999999999999997 47899
Q ss_pred HHHHhhhh
Q 030701 163 DLILNFSV 170 (173)
Q Consensus 163 ~lLl~~~~ 170 (173)
++|+++..
T Consensus 200 ~~Ll~~ga 207 (241)
T 1k1a_A 200 RTLVRSGA 207 (241)
T ss_dssp HHHHHTTC
T ss_pred HHHHhcCC
Confidence 99988754
No 77
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.39 E-value=1.3e-12 Score=101.12 Aligned_cols=79 Identities=14% Similarity=0.135 Sum_probs=70.5
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHH----HHHHHcCCCc------ccccCCCCchhhhc
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKI----EELLRAGASY------TVKDADGRTALERA 156 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v----~~LL~~GAdi------~~~d~~G~TpLh~A 156 (173)
+++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++ ++|++.|+++ +.+|..|.||||+|
T Consensus 125 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A 204 (232)
T 2rfa_A 125 LSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLA 204 (232)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHH
Confidence 33499999999999999999987 45999999999999988 9999999998 58999999999999
Q ss_pred C---chHHHHHHHhhhhc
Q 030701 157 P---SEEIKDLILNFSVQ 171 (173)
Q Consensus 157 ~---~~ei~~lLl~~~~~ 171 (173)
+ +.+++++|+++...
T Consensus 205 ~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 205 GVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp HHHTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHhcCcc
Confidence 7 47899999887653
No 78
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.39 E-value=5.2e-13 Score=105.54 Aligned_cols=76 Identities=25% Similarity=0.242 Sum_probs=68.2
Q ss_pred HHHHHcCCHHHHHHHHHCCCC---C------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIH---P------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEI 161 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~---~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei 161 (173)
|+|+..|+.++|++|++.|++ + +.||||+|+..|+.+++++|+++|++++.++..|.||||+|+ +.++
T Consensus 14 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~ 93 (282)
T 1oy3_D 14 HLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTC 93 (282)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHH
T ss_pred HHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcch
Confidence 349999999999999998876 2 459999999999999999999999999999999999999997 3788
Q ss_pred HHHHHhhh
Q 030701 162 KDLILNFS 169 (173)
Q Consensus 162 ~~lLl~~~ 169 (173)
+++|+++.
T Consensus 94 v~~Ll~~~ 101 (282)
T 1oy3_D 94 ACVLLQPR 101 (282)
T ss_dssp HHHHSSSC
T ss_pred hHhhhccC
Confidence 88887654
No 79
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.38 E-value=6e-13 Score=111.37 Aligned_cols=80 Identities=24% Similarity=0.243 Sum_probs=70.4
Q ss_pred HHHHHHcCCHHHHHHHHHCC-CCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQN-IHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIK 162 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~G-a~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~ 162 (173)
+|+|+..|+.++|++|++.+ +++ +.||||+|+..|+.+++++|+++|++++.+|..|.||||+|. +.+++
T Consensus 283 Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv 362 (373)
T 2fo1_E 283 LHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIV 362 (373)
T ss_dssp HHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHH
Confidence 44599999999999999876 666 459999999999999999999999999999999999999997 47999
Q ss_pred HHHHhhhhcc
Q 030701 163 DLILNFSVQK 172 (173)
Q Consensus 163 ~lLl~~~~~~ 172 (173)
++|+++..++
T Consensus 363 ~~Ll~~~a~~ 372 (373)
T 2fo1_E 363 DIFDRCRPER 372 (373)
T ss_dssp HHHHTTC---
T ss_pred HHHHhcCccc
Confidence 9999887654
No 80
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.38 E-value=6.4e-13 Score=104.67 Aligned_cols=78 Identities=23% Similarity=0.265 Sum_probs=70.2
Q ss_pred HHHHHHcCCHHHHHHHHH---CCCCC------CCcHHHHHHH--cCCHH-------HHHHHHHcCCCc-------ccccC
Q 030701 93 MGMLAVEGTYDKMEALLS---QNIHP------VDILLMLAAS--EGDKP-------KIEELLRAGASY-------TVKDA 147 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~---~Ga~~------~dTpLh~Aa~--~g~~~-------~v~~LL~~GAdi-------~~~d~ 147 (173)
+|+|+..|+.+++++|++ .|+++ +.||||+|+. .++.+ ++++|++.|+++ +.+|.
T Consensus 140 L~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~ 219 (256)
T 2etb_A 140 LSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNH 219 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCT
T ss_pred HHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCC
Confidence 334999999999999999 89887 4599999999 88888 999999999999 99999
Q ss_pred CCCchhhhcC---chHHHHHHHhhhh
Q 030701 148 DGRTALERAP---SEEIKDLILNFSV 170 (173)
Q Consensus 148 ~G~TpLh~A~---~~ei~~lLl~~~~ 170 (173)
.|.||||+|+ +.+++++|+++..
T Consensus 220 ~g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 220 QGLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 9999999997 4789999988764
No 81
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.38 E-value=1.7e-12 Score=104.78 Aligned_cols=75 Identities=27% Similarity=0.182 Sum_probs=64.5
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLI 165 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lL 165 (173)
+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|.+|.||||+|+ +.+++++|
T Consensus 65 ~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~L 144 (285)
T 3d9h_A 65 EAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLL 144 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHH
Confidence 399999999999999998877 449999999999999999999999999999999999999887 46788888
Q ss_pred Hhhh
Q 030701 166 LNFS 169 (173)
Q Consensus 166 l~~~ 169 (173)
+++.
T Consensus 145 l~~g 148 (285)
T 3d9h_A 145 LQHG 148 (285)
T ss_dssp HHTT
T ss_pred HHCC
Confidence 7764
No 82
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.38 E-value=1.8e-12 Score=105.16 Aligned_cols=76 Identities=21% Similarity=0.213 Sum_probs=59.6
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCchHHHHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPSEEIKDLIL 166 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~~ei~~lLl 166 (173)
+|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|+|++.+|.+|.||+++| .+++.++|.
T Consensus 251 L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a-~~~~~~~l~ 329 (351)
T 3utm_A 251 LHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG-NEAVQQILS 329 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS-CHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh-hHHHHHHHH
Confidence 44588888888888888888777 34888888888888888888888888888888888888887 566777766
Q ss_pred hhh
Q 030701 167 NFS 169 (173)
Q Consensus 167 ~~~ 169 (173)
+..
T Consensus 330 ~~~ 332 (351)
T 3utm_A 330 EST 332 (351)
T ss_dssp HC-
T ss_pred hcc
Confidence 543
No 83
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.38 E-value=1.1e-12 Score=104.97 Aligned_cols=67 Identities=18% Similarity=0.134 Sum_probs=62.7
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS 158 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~ 158 (173)
++|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|+|++.+|..|.||||+|..
T Consensus 202 ~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 202 ALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp HHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred HHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 456699999999999999999987 4599999999999999999999999999999999999999974
No 84
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.38 E-value=1.9e-12 Score=99.98 Aligned_cols=78 Identities=22% Similarity=0.227 Sum_probs=65.9
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
+++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.++++
T Consensus 110 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 189 (231)
T 3aji_A 110 LHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAK 189 (231)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHH
Confidence 34499999999999999988877 448999999999999999999999999999999999999986 368888
Q ss_pred HHHhhhh
Q 030701 164 LILNFSV 170 (173)
Q Consensus 164 lLl~~~~ 170 (173)
+|++++.
T Consensus 190 ~Ll~~ga 196 (231)
T 3aji_A 190 FLVTQGA 196 (231)
T ss_dssp HHHHTTC
T ss_pred HHHHCCC
Confidence 8887653
No 85
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.37 E-value=1.2e-12 Score=103.13 Aligned_cols=77 Identities=17% Similarity=0.127 Sum_probs=68.8
Q ss_pred HHHHHcCCHHHHHHHHH---CCCCC------CCcHHHHHHHcCC---------HHHHHHHHHcCCCc-------ccccCC
Q 030701 94 GMLAVEGTYDKMEALLS---QNIHP------VDILLMLAASEGD---------KPKIEELLRAGASY-------TVKDAD 148 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~---~Ga~~------~dTpLh~Aa~~g~---------~~~v~~LL~~GAdi-------~~~d~~ 148 (173)
|+|+..|+.+++++|++ .|+++ +.||||+|+..++ .+++++|++.|+++ +.+|.+
T Consensus 145 ~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~ 224 (260)
T 3jxi_A 145 SLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNND 224 (260)
T ss_dssp HHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTT
T ss_pred HHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCC
Confidence 34999999999999999 89887 4599999998887 79999999999999 789999
Q ss_pred CCchhhhcC---chHHHHHHHhhhh
Q 030701 149 GRTALERAP---SEEIKDLILNFSV 170 (173)
Q Consensus 149 G~TpLh~A~---~~ei~~lLl~~~~ 170 (173)
|.||||+|+ +.+++++|++...
T Consensus 225 g~tpL~~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 225 GLSPLMMAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 999999997 4789999987654
No 86
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.35 E-value=2.4e-12 Score=99.72 Aligned_cols=62 Identities=29% Similarity=0.301 Sum_probs=29.2
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~ 157 (173)
|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|+|++.+|.+|.||||+|.
T Consensus 151 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 218 (237)
T 3b7b_A 151 AAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCAS 218 (237)
T ss_dssp HHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSC
T ss_pred HHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 44444444444444444443 224444444444444444444444444444444444444444
No 87
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.35 E-value=1.9e-12 Score=102.98 Aligned_cols=78 Identities=21% Similarity=0.235 Sum_probs=69.9
Q ss_pred HHHHHHcCCHHHHHHHHH---CCCCC------CCcHHHHHHHcCC---------HHHHHHHHHcCCCcc-------cccC
Q 030701 93 MGMLAVEGTYDKMEALLS---QNIHP------VDILLMLAASEGD---------KPKIEELLRAGASYT-------VKDA 147 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~---~Ga~~------~dTpLh~Aa~~g~---------~~~v~~LL~~GAdi~-------~~d~ 147 (173)
+|+|+..|+.+++++|++ .|+++ +.||||+|+..|+ .+++++|++.|++++ .+|.
T Consensus 152 L~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~ 231 (273)
T 2pnn_A 152 LSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNR 231 (273)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT
T ss_pred HHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCC
Confidence 334999999999999999 89887 4499999999998 899999999999997 5899
Q ss_pred CCCchhhhcC---chHHHHHHHhhhh
Q 030701 148 DGRTALERAP---SEEIKDLILNFSV 170 (173)
Q Consensus 148 ~G~TpLh~A~---~~ei~~lLl~~~~ 170 (173)
+|.||||+|+ +.+++++|+++.+
T Consensus 232 ~g~TpL~~A~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 232 KGLTPLALAASSGKIGVLAYILQREI 257 (273)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHhChHHHHHHHHHCCC
Confidence 9999999997 4789999998876
No 88
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.35 E-value=2.1e-12 Score=109.04 Aligned_cols=73 Identities=26% Similarity=0.338 Sum_probs=38.4
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLIL 166 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl 166 (173)
||..|+.++|++|++.|+++ +.||||+|+..|+.+++++|++.|++++.++.+|.||||+|+ +.+++++|+
T Consensus 21 Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 100 (437)
T 1n11_A 21 ASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLL 100 (437)
T ss_dssp HHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 55555555555555555544 225555555555555555555555555555555555555554 244555554
Q ss_pred hh
Q 030701 167 NF 168 (173)
Q Consensus 167 ~~ 168 (173)
++
T Consensus 101 ~~ 102 (437)
T 1n11_A 101 EN 102 (437)
T ss_dssp HH
T ss_pred hC
Confidence 43
No 89
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.34 E-value=3.2e-12 Score=99.46 Aligned_cols=78 Identities=24% Similarity=0.339 Sum_probs=69.5
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccC-CCCchhhhcC--
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------------VDILLMLAASEGDKPKIEELLRAGASYTVKDA-DGRTALERAP-- 157 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~-~G~TpLh~A~-- 157 (173)
+++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.++. .|.||||+|+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~ 161 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL 161 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc
Confidence 33499999999999999998742 44999999999999999999999999999998 9999999997
Q ss_pred -chHHHHHHHhhhh
Q 030701 158 -SEEIKDLILNFSV 170 (173)
Q Consensus 158 -~~ei~~lLl~~~~ 170 (173)
+.+++++|+++++
T Consensus 162 ~~~~~v~~Ll~~ga 175 (236)
T 1ikn_D 162 QNPDLVSLLLKCGA 175 (236)
T ss_dssp TCHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHcCC
Confidence 4789999988754
No 90
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.34 E-value=5.3e-13 Score=102.36 Aligned_cols=77 Identities=16% Similarity=0.117 Sum_probs=66.7
Q ss_pred HHHHcCC------HHHHHHHHHCCCCC------CC-cHHHHHHHcC-----CHHHHHHHHH-cCCCcccccCCCCchhhh
Q 030701 95 MLAVEGT------YDKMEALLSQNIHP------VD-ILLMLAASEG-----DKPKIEELLR-AGASYTVKDADGRTALER 155 (173)
Q Consensus 95 ~Aa~~G~------~~~v~~LL~~Ga~~------~d-TpLh~Aa~~g-----~~~~v~~LL~-~GAdi~~~d~~G~TpLh~ 155 (173)
+|+..|+ .+++++||+.|+++ +. ||||+|+..+ +.+++++|+. .|+|++.+|..|+||||+
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~ 160 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEF 160 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHH
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHH
Confidence 4888887 68899999999998 55 9999999854 3568999999 999999999999999999
Q ss_pred cC---chHHHHHHHhhhhc
Q 030701 156 AP---SEEIKDLILNFSVQ 171 (173)
Q Consensus 156 A~---~~ei~~lLl~~~~~ 171 (173)
|. ..+++++|+.|..+
T Consensus 161 A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 161 VKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp HHTTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH
Confidence 97 37899999888653
No 91
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.33 E-value=5.2e-12 Score=99.37 Aligned_cols=76 Identities=22% Similarity=0.187 Sum_probs=69.2
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++..+..|.||||+|+ +.+++++
T Consensus 44 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 123 (285)
T 1wdy_A 44 HNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHH
Confidence 3499999999999999999987 449999999999999999999999999999999999999997 4788888
Q ss_pred HHhhh
Q 030701 165 ILNFS 169 (173)
Q Consensus 165 Ll~~~ 169 (173)
|+++.
T Consensus 124 Ll~~g 128 (285)
T 1wdy_A 124 LYKRG 128 (285)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 88764
No 92
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.33 E-value=2.4e-12 Score=108.76 Aligned_cols=73 Identities=23% Similarity=0.264 Sum_probs=37.7
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLIL 166 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl 166 (173)
|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+ +.+++++|+
T Consensus 285 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll 364 (437)
T 1n11_A 285 VAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL 364 (437)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHH
Confidence 55555555555555555443 225555555555555555555555555555555555555554 244555555
Q ss_pred hh
Q 030701 167 NF 168 (173)
Q Consensus 167 ~~ 168 (173)
++
T Consensus 365 ~~ 366 (437)
T 1n11_A 365 KN 366 (437)
T ss_dssp HT
T ss_pred HC
Confidence 44
No 93
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.32 E-value=1.6e-12 Score=104.97 Aligned_cols=74 Identities=22% Similarity=0.166 Sum_probs=54.6
Q ss_pred HHHcCCHHHHHHHHHCCCCC----CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHHhh
Q 030701 96 LAVEGTYDKMEALLSQNIHP----VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLILNF 168 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~----~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl~~ 168 (173)
|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.+++++|+++
T Consensus 38 A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 117 (285)
T 3kea_A 38 AIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK 117 (285)
T ss_dssp HHHTTCHHHHHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc
Confidence 77777777777777777766 447777777777777777777777777777777777777775 35677777665
Q ss_pred h
Q 030701 169 S 169 (173)
Q Consensus 169 ~ 169 (173)
.
T Consensus 118 g 118 (285)
T 3kea_A 118 N 118 (285)
T ss_dssp C
T ss_pred C
Confidence 4
No 94
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.32 E-value=2.9e-12 Score=105.90 Aligned_cols=78 Identities=14% Similarity=0.197 Sum_probs=70.9
Q ss_pred HHHHHHcC--CHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCC-----cccccCCCCchhhhcC--
Q 030701 93 MGMLAVEG--TYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGAS-----YTVKDADGRTALERAP-- 157 (173)
Q Consensus 93 ~~~Aa~~G--~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAd-----i~~~d~~G~TpLh~A~-- 157 (173)
+++|+..| +.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++ ++..|..|.||||+|+
T Consensus 142 L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~ 221 (364)
T 3ljn_A 142 LHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILI 221 (364)
T ss_dssp HHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTT
T ss_pred HHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHc
Confidence 44599999 999999999999987 44999999999999999999999999 9999999999999997
Q ss_pred -chHHHHHHHhhhh
Q 030701 158 -SEEIKDLILNFSV 170 (173)
Q Consensus 158 -~~ei~~lLl~~~~ 170 (173)
+.+++++|+++..
T Consensus 222 g~~~~v~~Ll~~ga 235 (364)
T 3ljn_A 222 NWEDVAMRFVEMGI 235 (364)
T ss_dssp TCHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHcCC
Confidence 4789999988653
No 95
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.32 E-value=5.7e-12 Score=101.43 Aligned_cols=75 Identities=31% Similarity=0.395 Sum_probs=65.9
Q ss_pred HHHHHHcCCHHHHHHHHHCCC-CC--------------------------------------------CCcHHHHHHHcC
Q 030701 93 MGMLAVEGTYDKMEALLSQNI-HP--------------------------------------------VDILLMLAASEG 127 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga-~~--------------------------------------------~dTpLh~Aa~~g 127 (173)
+++|+..|+.+++++|++.|+ ++ +.||||+|+..|
T Consensus 115 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g 194 (276)
T 4hbd_A 115 LHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHG 194 (276)
T ss_dssp HHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 344999999999999999887 22 239999999999
Q ss_pred CHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHHh
Q 030701 128 DKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLILN 167 (173)
Q Consensus 128 ~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl~ 167 (173)
+.+++++|++.|+|++.+|.+|.||||+|+ +.+++++|++
T Consensus 195 ~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 237 (276)
T 4hbd_A 195 RVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLA 237 (276)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred CHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 999999999999999999999999999997 4789999887
No 96
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.32 E-value=5.9e-12 Score=97.52 Aligned_cols=75 Identities=21% Similarity=0.249 Sum_probs=52.6
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcC-CCcccccCCCCchhhhcC---chHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAG-ASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~G-Adi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.| ++++..+..|.||||+|+ +.+++++
T Consensus 50 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 129 (237)
T 3b7b_A 50 EAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKL 129 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHH
Confidence 377777777777777777665 337777777777777777777776 677777777777777775 3566666
Q ss_pred HHhhh
Q 030701 165 ILNFS 169 (173)
Q Consensus 165 Ll~~~ 169 (173)
|+++.
T Consensus 130 Ll~~g 134 (237)
T 3b7b_A 130 LLSKG 134 (237)
T ss_dssp HHHTT
T ss_pred HHHCC
Confidence 66654
No 97
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.31 E-value=6.3e-12 Score=109.38 Aligned_cols=80 Identities=19% Similarity=0.282 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHCCCCC------------CCcHHHHHHH---cCCHHHHHHHHHcCCCcccccCCCCc
Q 030701 87 EQYFNYMGMLAVEGTYDKMEALLSQNIHP------------VDILLMLAAS---EGDKPKIEELLRAGASYTVKDADGRT 151 (173)
Q Consensus 87 ~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------------~dTpLh~Aa~---~g~~~~v~~LL~~GAdi~~~d~~G~T 151 (173)
+.|+. |+..|+.+.|+.||+.|+++ +.||||+|+. .|+.+++++|+++|+|+|.+|.+|.|
T Consensus 134 ~~L~~----A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~T 209 (497)
T 3lvq_E 134 QRLWT----AICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNT 209 (497)
T ss_dssp HHHHH----HHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCC
T ss_pred HHHHH----HHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCc
Confidence 55777 99999999999999999885 3399999966 89999999999999999999999999
Q ss_pred hhhhcC---chHHHHHHHhhhh
Q 030701 152 ALERAP---SEEIKDLILNFSV 170 (173)
Q Consensus 152 pLh~A~---~~ei~~lLl~~~~ 170 (173)
|||+|+ +.+++++|+++++
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga 231 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRA 231 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCC
Confidence 999998 4789999998764
No 98
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.31 E-value=7.2e-12 Score=102.49 Aligned_cols=81 Identities=21% Similarity=0.129 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCccc-------------
Q 030701 85 DVEQYFNYMGMLAVEGTYDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTV------------- 144 (173)
Q Consensus 85 ~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~------------- 144 (173)
+.+.|+. |+..|++++|++||+.|+++ +.||||+|+..|+.++|++|+++|++++.
T Consensus 25 ~~t~L~~----Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 100 (337)
T 4g8k_A 25 DNHLLIK----AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAA 100 (337)
T ss_dssp HHHHHHH----HHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CChHHHH----HHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHH
Confidence 3445666 99999999999999999987 34999999999999999999999987654
Q ss_pred --------------------ccCCCCchhhhcC---chHHHHHHHhhh
Q 030701 145 --------------------KDADGRTALERAP---SEEIKDLILNFS 169 (173)
Q Consensus 145 --------------------~d~~G~TpLh~A~---~~ei~~lLl~~~ 169 (173)
.|..|.||||+|+ ..+++++|+++.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~g 148 (337)
T 4g8k_A 101 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG 148 (337)
T ss_dssp HHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT
T ss_pred hcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 4566777888776 356777766543
No 99
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.31 E-value=7.6e-12 Score=94.58 Aligned_cols=74 Identities=22% Similarity=0.270 Sum_probs=40.4
Q ss_pred HHHcCCHHHHHHHH-HCCCCC------CCcHHHHHHHcCCHHHHHHHHHcC-CCcccccCCCCchhhhcC---c-----h
Q 030701 96 LAVEGTYDKMEALL-SQNIHP------VDILLMLAASEGDKPKIEELLRAG-ASYTVKDADGRTALERAP---S-----E 159 (173)
Q Consensus 96 Aa~~G~~~~v~~LL-~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~G-Adi~~~d~~G~TpLh~A~---~-----~ 159 (173)
|+..|+.+++++|+ ..+.++ +.||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+ + .
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 158 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQ 158 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHH
T ss_pred HHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHH
Confidence 55555555555555 333233 225666666666666666666555 566666666666666554 1 3
Q ss_pred HHHHHHHhhh
Q 030701 160 EIKDLILNFS 169 (173)
Q Consensus 160 ei~~lLl~~~ 169 (173)
+++++|+++.
T Consensus 159 ~~v~~Ll~~g 168 (201)
T 3hra_A 159 DIVKLLMENG 168 (201)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHCC
Confidence 5555555543
No 100
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.31 E-value=1.1e-11 Score=97.47 Aligned_cols=75 Identities=23% Similarity=0.187 Sum_probs=68.9
Q ss_pred HHHHcCCHHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
.|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.++.+|.||||+|+ +.+++++
T Consensus 11 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (285)
T 1wdy_A 11 KAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKL 90 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHH
Confidence 499999999999999999877 349999999999999999999999999999999999999997 4788998
Q ss_pred HHhhh
Q 030701 165 ILNFS 169 (173)
Q Consensus 165 Ll~~~ 169 (173)
|+++.
T Consensus 91 Ll~~g 95 (285)
T 1wdy_A 91 FLSKG 95 (285)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 88764
No 101
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.29 E-value=7.5e-12 Score=105.95 Aligned_cols=78 Identities=21% Similarity=0.186 Sum_probs=70.6
Q ss_pred HHHHHHc-CCHHHHHHHHHCCCCC--------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chH
Q 030701 93 MGMLAVE-GTYDKMEALLSQNIHP--------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEE 160 (173)
Q Consensus 93 ~~~Aa~~-G~~~~v~~LL~~Ga~~--------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~e 160 (173)
++.|+.. |++++++.||+.|+++ +.||||+|+..|+.+++++|+++|++++..|..|.||||+|+ +.+
T Consensus 203 L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~ 282 (368)
T 3jue_A 203 LFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTG 282 (368)
T ss_dssp HHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHH
Confidence 3449999 9999999999999987 239999999999999999999999999999999999999997 478
Q ss_pred HHHHHHhhhh
Q 030701 161 IKDLILNFSV 170 (173)
Q Consensus 161 i~~lLl~~~~ 170 (173)
++++|+++.+
T Consensus 283 ~v~~LL~~Ga 292 (368)
T 3jue_A 283 LACLFLKRGA 292 (368)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHCcC
Confidence 9999988754
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.28 E-value=2.1e-11 Score=98.86 Aligned_cols=79 Identities=14% Similarity=0.090 Sum_probs=70.8
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------------CCcHHHHHHHc---CCHHHHHHHHHcCCCcccccCCCCchhhhc
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------------VDILLMLAASE---GDKPKIEELLRAGASYTVKDADGRTALERA 156 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------------~dTpLh~Aa~~---g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A 156 (173)
.++.|+..|+.+.++.++..|+++ +.||||+|+.. |+.+++++|+++|++++.+|.+|.||||+|
T Consensus 133 ~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A 212 (278)
T 1dcq_A 133 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC 212 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHH
T ss_pred hhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHH
Confidence 344599999999999999999884 34999999999 899999999999999999999999999999
Q ss_pred C---chHHHHHHHhhhh
Q 030701 157 P---SEEIKDLILNFSV 170 (173)
Q Consensus 157 ~---~~ei~~lLl~~~~ 170 (173)
+ +.+++++|+++++
T Consensus 213 ~~~g~~~~v~~Ll~~ga 229 (278)
T 1dcq_A 213 CLTDNAECLKLLLRGKA 229 (278)
T ss_dssp HHTTCHHHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHcCC
Confidence 7 4789999998754
No 103
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.25 E-value=2.6e-11 Score=93.24 Aligned_cols=73 Identities=18% Similarity=0.255 Sum_probs=43.1
Q ss_pred HHHcCCHHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLI 165 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lL 165 (173)
|+..|+.+++++|++.|.++ +.||||+|+..|+.+++++|++.|++++..+..|.||||+|+ +.+++++|
T Consensus 49 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 128 (240)
T 3eu9_A 49 AAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYL 128 (240)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHH
Confidence 66666666666666666544 226666666666666666666666666666666666666654 24555555
Q ss_pred Hhh
Q 030701 166 LNF 168 (173)
Q Consensus 166 l~~ 168 (173)
+++
T Consensus 129 l~~ 131 (240)
T 3eu9_A 129 IAK 131 (240)
T ss_dssp HHT
T ss_pred Hhc
Confidence 543
No 104
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.23 E-value=4.2e-11 Score=98.15 Aligned_cols=81 Identities=19% Similarity=0.257 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHCCCCC------------CCcHHHHHHHc---CCHHHHHHHHHcCCCcccccCCCC
Q 030701 86 VEQYFNYMGMLAVEGTYDKMEALLSQNIHP------------VDILLMLAASE---GDKPKIEELLRAGASYTVKDADGR 150 (173)
Q Consensus 86 ~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------------~dTpLh~Aa~~---g~~~~v~~LL~~GAdi~~~d~~G~ 150 (173)
...++. |+..|+.+.++.|+..|+++ +.||||+|+.. |+.+++++|++.|++++.+|.+|.
T Consensus 152 ~~~L~~----A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~ 227 (301)
T 2b0o_E 152 PQRLWT----AICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGN 227 (301)
T ss_dssp HHHHHH----HHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCC
T ss_pred HHHHhh----hhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCC
Confidence 345666 99999999999999999886 12999999997 899999999999999999999999
Q ss_pred chhhhcC---chHHHHHHHhhhh
Q 030701 151 TALERAP---SEEIKDLILNFSV 170 (173)
Q Consensus 151 TpLh~A~---~~ei~~lLl~~~~ 170 (173)
||||+|+ +.+++++|+++.+
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~ga 250 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGRA 250 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999997 4789999998754
No 105
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.21 E-value=2.1e-11 Score=93.70 Aligned_cols=76 Identities=24% Similarity=0.247 Sum_probs=58.1
Q ss_pred HHHcCC-HHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 96 LAVEGT-YDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 96 Aa~~G~-~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
|+..++ .+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|. +.+++++
T Consensus 149 a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~ 228 (240)
T 3eu9_A 149 AAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINH 228 (240)
T ss_dssp HHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 554444 55666666666555 238999999999999999999999999999999999999987 4788888
Q ss_pred HHhhhhc
Q 030701 165 ILNFSVQ 171 (173)
Q Consensus 165 Ll~~~~~ 171 (173)
|+++..+
T Consensus 229 L~~~~~~ 235 (240)
T 3eu9_A 229 LQEARQA 235 (240)
T ss_dssp HHHHC--
T ss_pred HHHhhhc
Confidence 8877654
No 106
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.20 E-value=3.9e-11 Score=98.11 Aligned_cols=73 Identities=21% Similarity=0.181 Sum_probs=49.4
Q ss_pred HHHHHHcCCHHHHHHHHHC-CCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQ-NIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIK 162 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~-Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~ 162 (173)
+|+|+..|+.++++.|+.. |+++ +.||||+|+..|+.++|++|+++|||+|.+ +|||+|+ +.+++
T Consensus 243 L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv 317 (337)
T 4g8k_A 243 LILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYDHSLV 317 (337)
T ss_dssp HHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHH
T ss_pred HHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHH
Confidence 3447777777777777764 5554 347777777777777777777777777653 4777775 35677
Q ss_pred HHHHhhhh
Q 030701 163 DLILNFSV 170 (173)
Q Consensus 163 ~lLl~~~~ 170 (173)
++|+++++
T Consensus 318 ~~Ll~~GA 325 (337)
T 4g8k_A 318 KVLLSHGA 325 (337)
T ss_dssp HHHHHTTC
T ss_pred HHHHHCcC
Confidence 77776653
No 107
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.18 E-value=1.9e-11 Score=100.65 Aligned_cols=77 Identities=16% Similarity=0.151 Sum_probs=60.5
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCC---HHHHHHHHHcC-CCcccccCCCCchhhhcC-----
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGD---KPKIEELLRAG-ASYTVKDADGRTALERAP----- 157 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~---~~~v~~LL~~G-Adi~~~d~~G~TpLh~A~----- 157 (173)
+|+|+..|+.++|++||+.|+++ +.||||+|+..|+ .++++.|++.+ ++++.+|..|.||||+|+
T Consensus 135 Lh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~ 214 (327)
T 1sw6_A 135 LHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGM 214 (327)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccc
Confidence 34488889999999898888887 4489999888887 67777777776 788888888899998875
Q ss_pred --chHHHHHHHhhh
Q 030701 158 --SEEIKDLILNFS 169 (173)
Q Consensus 158 --~~ei~~lLl~~~ 169 (173)
..+++++|++..
T Consensus 215 ~g~~~~v~~Ll~~~ 228 (327)
T 1sw6_A 215 TGCSAAAKYYLDIL 228 (327)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHH
Confidence 357777776653
No 108
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.18 E-value=1e-11 Score=105.35 Aligned_cols=78 Identities=15% Similarity=0.168 Sum_probs=67.4
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC--------CCcHHHHHHHcCCHHHHHHHHHcCCCccc--ccCCCCchhhhcC-c--
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP--------VDILLMLAASEGDKPKIEELLRAGASYTV--KDADGRTALERAP-S-- 158 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~--------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~--~d~~G~TpLh~A~-~-- 158 (173)
++++||..|+.++|++|++.|+++ ..||||+|+..|+.++|++|+++|++++. .|.+|.||||+|+ .
T Consensus 131 pL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G 210 (376)
T 2aja_A 131 AFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRG 210 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCC
Confidence 344599999999999999999763 23999999999999999999999999987 8889999999998 4
Q ss_pred -hHHHHHHHhhh
Q 030701 159 -EEIKDLILNFS 169 (173)
Q Consensus 159 -~ei~~lLl~~~ 169 (173)
.+++++|++..
T Consensus 211 ~~eiv~~Ll~~g 222 (376)
T 2aja_A 211 HHNVINFLLDCP 222 (376)
T ss_dssp CHHHHHHHTTSH
T ss_pred CHHHHHHHHhCC
Confidence 68888887643
No 109
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.14 E-value=9.2e-11 Score=96.49 Aligned_cols=67 Identities=18% Similarity=0.242 Sum_probs=59.0
Q ss_pred HHHHHHH----cCCHHHHHHHHHCC-----------------------------------------------CCC----C
Q 030701 92 YMGMLAV----EGTYDKMEALLSQN-----------------------------------------------IHP----V 116 (173)
Q Consensus 92 ~~~~Aa~----~G~~~~v~~LL~~G-----------------------------------------------a~~----~ 116 (173)
++|+|+. .|+.+++++|++.+ .+. +
T Consensus 204 pLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G 283 (327)
T 1sw6_A 204 ILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNG 283 (327)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTS
T ss_pred HHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCC
Confidence 4566998 89999999998763 333 5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc
Q 030701 117 DILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS 158 (173)
Q Consensus 117 dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~ 158 (173)
.||||+|+..|+.+++++|+++|||++.+|.+|+||||+|+.
T Consensus 284 ~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 284 DTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp CCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHh
Confidence 599999999999999999999999999999999999999974
No 110
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.13 E-value=6.3e-11 Score=99.04 Aligned_cols=79 Identities=16% Similarity=0.123 Sum_probs=69.7
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcC---CCcccccCCCCchhhhcC-----
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAG---ASYTVKDADGRTALERAP----- 157 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~G---Adi~~~d~~G~TpLh~A~----- 157 (173)
++++|+..|+.++|++|++.|+++ +.||||+|+..|+.+++++|++.| ++++..|.+|.||||+|+
T Consensus 169 pL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~ 248 (373)
T 2fo1_E 169 PLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGR 248 (373)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCST
T ss_pred HHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCc
Confidence 345599999999999999999987 449999999999999999999988 899999999999999986
Q ss_pred -chHHHHHHHhhhh
Q 030701 158 -SEEIKDLILNFSV 170 (173)
Q Consensus 158 -~~ei~~lLl~~~~ 170 (173)
..+++++|+++..
T Consensus 249 ~~~~~v~~Ll~~g~ 262 (373)
T 2fo1_E 249 DQVASAKLLVEKGA 262 (373)
T ss_dssp THHHHHHHHHHHTC
T ss_pred chHHHHHHHHHCCC
Confidence 3578888887653
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.08 E-value=1.6e-10 Score=77.74 Aligned_cols=55 Identities=36% Similarity=0.430 Sum_probs=49.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHHhhhh
Q 030701 116 VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLILNFSV 170 (173)
Q Consensus 116 ~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl~~~~ 170 (173)
+.||||+|+..|+.+++++|++.|++++.+|.+|.||||+|+ +.+++++|+++..
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 59 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 459999999999999999999999999999999999999997 4789999987653
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.07 E-value=8.9e-11 Score=81.66 Aligned_cols=59 Identities=17% Similarity=0.164 Sum_probs=53.2
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchh
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTAL 153 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpL 153 (173)
+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|++++.++..|.+|-
T Consensus 48 ~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 48 LAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 499999999999999999987 44999999999999999999999999999999999874
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.06 E-value=4.9e-11 Score=101.13 Aligned_cols=78 Identities=13% Similarity=0.100 Sum_probs=62.7
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCC------C---CCcHHHHHHHcCCHHHHHHHHHcCCC---cccccCCCCchhhhcC--
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIH------P---VDILLMLAASEGDKPKIEELLRAGAS---YTVKDADGRTALERAP-- 157 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~------~---~dTpLh~Aa~~g~~~~v~~LL~~GAd---i~~~d~~G~TpLh~A~-- 157 (173)
++++||..|+.++|++|++.|+. + +.||||+|+..|+.++|++|+++|+| .+..+.+ .||||+|+
T Consensus 95 ~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~ 173 (376)
T 2aja_A 95 ICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAEN 173 (376)
T ss_dssp HHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHC
Confidence 44559999999999999999982 2 33999999999999999999999987 3333334 99999997
Q ss_pred -chHHHHHHHhhhh
Q 030701 158 -SEEIKDLILNFSV 170 (173)
Q Consensus 158 -~~ei~~lLl~~~~ 170 (173)
+.+++++|+++..
T Consensus 174 G~~eiv~~Ll~~ga 187 (376)
T 2aja_A 174 GHLHVLNRLCELAP 187 (376)
T ss_dssp TCHHHHHHHHHSCG
T ss_pred CCHHHHHHHHHcCC
Confidence 4789999988754
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=98.77 E-value=7.9e-09 Score=71.68 Aligned_cols=55 Identities=29% Similarity=0.406 Sum_probs=49.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHHhhhh
Q 030701 116 VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLILNFSV 170 (173)
Q Consensus 116 ~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl~~~~ 170 (173)
+.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.+++++|+++..
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga 81 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGA 81 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 449999999999999999999999999999999999999997 4789999887653
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=67.44 E-value=8.1 Score=21.69 Aligned_cols=15 Identities=20% Similarity=0.240 Sum_probs=13.1
Q ss_pred HHHHcCCHHHHHHHH
Q 030701 95 MLAVEGTYDKMEALL 109 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL 109 (173)
+||..|+++.++.|-
T Consensus 19 vA~seGd~etv~~Le 33 (40)
T 1gp8_A 19 AAASKGDVETYRKLK 33 (40)
T ss_dssp HHHTTSCHHHHHHHH
T ss_pred HHHhcCCHHHHHHHH
Confidence 699999999999774
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=32.26 E-value=98 Score=26.42 Aligned_cols=43 Identities=26% Similarity=0.142 Sum_probs=35.7
Q ss_pred HHHHcCCHHHHHHHHHCCCCC--------------------CCcHHHHHHHcCCHHHHHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP--------------------VDILLMLAASEGDKPKIEELLR 137 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~--------------------~dTpLh~Aa~~g~~~~v~~LL~ 137 (173)
+....|+...|+..+..|.++ +.|.+|+|....+.+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 455789999999888888777 2289999999999999998886
Done!