BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030702
(173 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224134699|ref|XP_002327468.1| predicted protein [Populus trichocarpa]
gi|222836022|gb|EEE74443.1| predicted protein [Populus trichocarpa]
Length = 283
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 103/168 (61%), Positives = 129/168 (76%), Gaps = 5/168 (2%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
MAEV+EKKGKMW TTGIVRNGKT+C IEETLFLAEIGAL ++D+ND CL LK+I++K++
Sbjct: 52 MAEVIEKKGKMWITTGIVRNGKTFCLIEETLFLAEIGALLVMDDNDECLALKDIHKKMSE 111
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMD 120
E++GCSWELFEVY+HLKSLGY+VGRHGVPW +K + S P S Q T + + V
Sbjct: 112 ERNGCSWELFEVYKHLKSLGYVVGRHGVPWSMK-----GVENNSKPCSSQGTIQNNRVEG 166
Query: 121 VEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 168
VE + V + N+Q++E+R FDVYLPN KF+KS PGDP+FLL L
Sbjct: 167 VEENSITCAVQMLSNLQVDELRLNFDVYLPNSKFRKSSPGDPAFLLCL 214
>gi|225441894|ref|XP_002284389.1| PREDICTED: uncharacterized protein LOC100257347 [Vitis vinifera]
Length = 255
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 124/169 (73%), Gaps = 7/169 (4%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
MAEVVE KGKMWTTTG++ +GK YCSIEETLFLAE+GAL+LLD+ND+ + LK IY+K++
Sbjct: 48 MAEVVEMKGKMWTTTGMLHSGKIYCSIEETLFLAELGALHLLDDNDVPISLKGIYDKVSQ 107
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMD 120
K GC WE FE YRHLKSLGYIVGRHG+PW K K + S Q TP+ + D
Sbjct: 108 GKCGCCWESFEAYRHLKSLGYIVGRHGIPWTSKGAK-------TCLDSHQGTPEGNSRTD 160
Query: 121 VEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 169
+EE+S + L N+ I EV+ +FDVYLPN KF+KS PGDPSF+L LT
Sbjct: 161 EGSEEENSTIELVNNMHITEVKLLFDVYLPNSKFRKSSPGDPSFVLCLT 209
>gi|297739626|emb|CBI29808.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 124/169 (73%), Gaps = 7/169 (4%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
MAEVVE KGKMWTTTG++ +GK YCSIEETLFLAE+GAL+LLD+ND+ + LK IY+K++
Sbjct: 74 MAEVVEMKGKMWTTTGMLHSGKIYCSIEETLFLAELGALHLLDDNDVPISLKGIYDKVSQ 133
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMD 120
K GC WE FE YRHLKSLGYIVGRHG+PW K K + S Q TP+ + D
Sbjct: 134 GKCGCCWESFEAYRHLKSLGYIVGRHGIPWTSKGAK-------TCLDSHQGTPEGNSRTD 186
Query: 121 VEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 169
+EE+S + L N+ I EV+ +FDVYLPN KF+KS PGDPSF+L LT
Sbjct: 187 EGSEEENSTIELVNNMHITEVKLLFDVYLPNSKFRKSSPGDPSFVLCLT 235
>gi|147790314|emb|CAN74373.1| hypothetical protein VITISV_010199 [Vitis vinifera]
Length = 1843
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 123/169 (72%), Gaps = 7/169 (4%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
MAEVVE KGKMWTTTG++ +GK YCSIEETLFLAE+GAL+LLD+ D+ + LK IY+K++
Sbjct: 1077 MAEVVEMKGKMWTTTGMLHSGKIYCSIEETLFLAELGALHLLDDXDVPISLKGIYDKVSQ 1136
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMD 120
K GC WE FE YRHLKSLGYIVGRHG+PW KG + S Q TP+ + D
Sbjct: 1137 GKCGCCWESFEAYRHLKSLGYIVGRHGIPW---TSKGXKTCLDSH----QGTPEGNSRTD 1189
Query: 121 VEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 169
+EE+S + L N+ I EV+ +FDVYLPN KF+KS PGDPSF+L LT
Sbjct: 1190 XGSEEENSTIELVNNMHITEVKLLFDVYLPNSKFRKSSPGDPSFVLCLT 1238
>gi|255572755|ref|XP_002527310.1| conserved hypothetical protein [Ricinus communis]
gi|223533310|gb|EEF35062.1| conserved hypothetical protein [Ricinus communis]
Length = 261
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 125/169 (73%), Gaps = 9/169 (5%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
MAE+VEKKGK+WT TGI R+GKTYCSIEETLFLAE+GAL L+D+ CL LK++Y K+
Sbjct: 54 MAELVEKKGKLWTNTGIARSGKTYCSIEETLFLAELGALVLMDDEGTCLSLKDLYGKMGY 113
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHG-VM 119
+KSGC ELFEVYRHLKSLGYIVGRHGVPW + KG SD T + +G V+
Sbjct: 114 QKSGCCSELFEVYRHLKSLGYIVGRHGVPWSM---KGVKSTCQSDS-----THENNGVVI 165
Query: 120 DVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 168
D E KE +S+V N+Q++E+R FDVYLPN KF+KS PG+P+F L L
Sbjct: 166 DNEVKETASIVQRLRNLQVDELRLDFDVYLPNSKFRKSSPGEPAFFLCL 214
>gi|356503431|ref|XP_003520512.1| PREDICTED: uncharacterized protein LOC100811412 [Glycine max]
Length = 264
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 125/171 (73%), Gaps = 7/171 (4%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
M +++EK GKMW TTGIVR+GK Y SIEETL+L E+GAL LLDN + L E YEK+A+
Sbjct: 24 MGDIIEKNGKMWVTTGIVRSGKIYSSIEETLYLMELGALDLLDNGGRSISLTETYEKVAS 83
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMD 120
KSGC WELF+VYRHLKS+GYI+GRHGV W +K I + + + L+ + + D
Sbjct: 84 GKSGCCWELFDVYRHLKSIGYIIGRHGVAWSLK-----SIKVPINLLLLKSQKEIEQLED 138
Query: 121 VEPKEESSL--VALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 169
++ K E S+ + LF +Q+N++RP FDVYLPN +F+KSCPGDPSFLLYL+
Sbjct: 139 IDSKSELSINELWLFGEMQVNDLRPDFDVYLPNSRFRKSCPGDPSFLLYLS 189
>gi|449449845|ref|XP_004142675.1| PREDICTED: uncharacterized protein LOC101210680 [Cucumis sativus]
gi|449525862|ref|XP_004169935.1| PREDICTED: uncharacterized LOC101210680 [Cucumis sativus]
Length = 267
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 126/173 (72%), Gaps = 8/173 (4%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
MAEV+E KG +WTTTGIVR GK YCSIEETLFL E+GAL+LLD+++ L LK++Y+K+A
Sbjct: 59 MAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAE 118
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSD-PVSLQVTPKRHGVM 119
+SG WE FEVYRHLKSLGYIVG+H VPW +K N+ +D +S + + G
Sbjct: 119 GRSGRLWEQFEVYRHLKSLGYIVGKHRVPWSLK-------NVRNDCDISSPSSTENKGAS 171
Query: 120 DVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLTCKY 172
DV+ +E S+ L IQ++EV P+FDV+LP+ KF+KS PGDP+F++ LT Y
Sbjct: 172 DVKSDDEQSICRLLNAIQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRGY 224
>gi|356570446|ref|XP_003553398.1| PREDICTED: uncharacterized protein LOC100782940 [Glycine max]
Length = 272
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 119/172 (69%), Gaps = 3/172 (1%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
M EV+EK GKMW TTGIVR+GK Y SIEETL+L E+GAL+L+DN + L E+YEK+A+
Sbjct: 56 MGEVIEKNGKMWVTTGIVRSGKIYSSIEETLYLMELGALHLVDNGGRSISLTEMYEKVAS 115
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVK--IPKGRDINITSDPVSLQVTPKRHGV 118
KSGC WELFEVYRHLKSLGYI+G HGV W +K I + + + D +
Sbjct: 116 GKSGCCWELFEVYRHLKSLGYIIGCHGVAWSLKKIIGEHKKSHRQHDFAHSNKSISHFSF 175
Query: 119 MDVEPKEESSLV-ALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 169
+ + S+ LF +QIN++RP FDVYLPN +F+KS PGDPSFLLYL+
Sbjct: 176 LTNAFRALVSICHKLFGKLQINDLRPDFDVYLPNSRFRKSSPGDPSFLLYLS 227
>gi|240255663|ref|NP_191295.4| uncharacterized protein [Arabidopsis thaliana]
gi|50198814|gb|AAT70440.1| At3g57360 [Arabidopsis thaliana]
gi|51972142|gb|AAU15175.1| At3g57360 [Arabidopsis thaliana]
gi|332646125|gb|AEE79646.1| uncharacterized protein [Arabidopsis thaliana]
Length = 254
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 116/169 (68%), Gaps = 19/169 (11%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDN-NDLCLPLKEIYEKIA 59
MAEV K+GK+WTTTGI+R+GKTYC IEE L+L+EIG L +L N +D+ +PLK++YEKIA
Sbjct: 52 MAEVEVKRGKLWTTTGIIRSGKTYCFIEEALYLSEIGELQILGNEDDIVIPLKDLYEKIA 111
Query: 60 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKI---PKGRDINITSDPVSLQVTPKRH 116
EKSGCSWE +EVYR+LK LGYI+GRHGV W +K P G + + +
Sbjct: 112 EEKSGCSWENYEVYRYLKGLGYILGRHGVSWTLKDAARPNGEEESACAGEC--------- 162
Query: 117 GVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFL 165
P + ++ L ++QI + + VFDVYLPN +FKKS PG+PSF+
Sbjct: 163 ------PADNDTVTKLLGDMQICDAKAVFDVYLPNSRFKKSSPGEPSFV 205
>gi|297817060|ref|XP_002876413.1| At3g57360 [Arabidopsis lyrata subsp. lyrata]
gi|297322251|gb|EFH52672.1| At3g57360 [Arabidopsis lyrata subsp. lyrata]
Length = 256
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 116/166 (69%), Gaps = 11/166 (6%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDN-NDLCLPLKEIYEKIA 59
MAEV K+GK+WTTTGI+R+GKTYC IEE L+L+EIG L +L N +D+ +PLK++YEK+A
Sbjct: 52 MAEVEVKRGKLWTTTGIIRSGKTYCFIEEALYLSEIGELQILSNEDDIVIPLKDLYEKMA 111
Query: 60 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVM 119
EKSGCSW+ +EVYR+LK LGYI+GR+G+ W +K D IT + +
Sbjct: 112 EEKSGCSWDNYEVYRYLKGLGYILGRNGISWTLK-----DAAITRPNGEEESACAGECLE 166
Query: 120 DVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFL 165
D + ++ L ++QI + + VFDVYLPN +FKKS PG+PSF+
Sbjct: 167 D-----KDTVTKLLGDMQICDAKAVFDVYLPNSRFKKSSPGEPSFV 207
>gi|297828688|ref|XP_002882226.1| hypothetical protein ARALYDRAFT_317116 [Arabidopsis lyrata subsp.
lyrata]
gi|297328066|gb|EFH58485.1| hypothetical protein ARALYDRAFT_317116 [Arabidopsis lyrata subsp.
lyrata]
Length = 252
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 111/171 (64%), Gaps = 21/171 (12%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLL-DNNDLCLPLKEIYEKIA 59
MAEV K+GK+WTTTGI+R GKTYC IEE L+L+EIG L LL D +D+ + LK++Y +IA
Sbjct: 48 MAEVELKRGKLWTTTGIIRTGKTYCFIEEALYLSEIGELQLLGDEDDVVISLKDLYREIA 107
Query: 60 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVK-----IPKGRDINITSDPVSLQVTPK 114
K GC WE +EVYR+LK LGYI+GRHGVPW K P D ++ + S
Sbjct: 108 EGKCGCCWEDYEVYRYLKGLGYILGRHGVPWTTKDVVNTTPSDEDESLCAGEFS------ 161
Query: 115 RHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFL 165
+++ S+ ++QI + RPVFDVYLPN FKKS PG+PSF+
Sbjct: 162 ---------QDKDSITKRLSDMQICDARPVFDVYLPNSHFKKSSPGEPSFV 203
>gi|79386899|ref|NP_186886.2| uncharacterized protein [Arabidopsis thaliana]
gi|332640277|gb|AEE73798.1| uncharacterized protein [Arabidopsis thaliana]
Length = 161
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 109/166 (65%), Gaps = 11/166 (6%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLL-DNNDLCLPLKEIYEKIA 59
MAEV K+GK+WTTTGI+R GKTYC IEE L+L+EIG L LL D +D+ + LK++Y +IA
Sbjct: 1 MAEVEVKRGKLWTTTGIIRTGKTYCFIEEALYLSEIGELQLLGDEDDVVISLKDLYGEIA 60
Query: 60 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVM 119
K GC WE +EVYR+LK LGYI+GRHGVPW K +N T +
Sbjct: 61 EGKYGCCWENYEVYRYLKGLGYILGRHGVPWTTKYA----VNTTPSDEDESLCAAEF--- 113
Query: 120 DVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFL 165
++ S+ L ++ I + RPVFDVYLPN +FKKS PG+PSF+
Sbjct: 114 ---FQDRDSVTKLLSDMHICDARPVFDVYLPNSQFKKSSPGEPSFV 156
>gi|334185029|ref|NP_001189791.1| uncharacterized protein [Arabidopsis thaliana]
gi|332640278|gb|AEE73799.1| uncharacterized protein [Arabidopsis thaliana]
Length = 197
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 109/166 (65%), Gaps = 11/166 (6%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLL-DNNDLCLPLKEIYEKIA 59
MAEV K+GK+WTTTGI+R GKTYC IEE L+L+EIG L LL D +D+ + LK++Y +IA
Sbjct: 1 MAEVEVKRGKLWTTTGIIRTGKTYCFIEEALYLSEIGELQLLGDEDDVVISLKDLYGEIA 60
Query: 60 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVM 119
K GC WE +EVYR+LK LGYI+GRHGVPW K +N T +
Sbjct: 61 EGKYGCCWENYEVYRYLKGLGYILGRHGVPWTTKYA----VNTTPSDEDESLCAAEFF-- 114
Query: 120 DVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFL 165
++ S+ L ++ I + RPVFDVYLPN +FKKS PG+PSF+
Sbjct: 115 ----QDRDSVTKLLSDMHICDARPVFDVYLPNSQFKKSSPGEPSFV 156
>gi|10092177|gb|AAG12596.1|AC068900_2 hypothetical protein; 15019-15869 [Arabidopsis thaliana]
Length = 213
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 109/166 (65%), Gaps = 11/166 (6%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLL-DNNDLCLPLKEIYEKIA 59
MAEV K+GK+WTTTGI+R GKTYC IEE L+L+EIG L LL D +D+ + LK++Y +IA
Sbjct: 53 MAEVEVKRGKLWTTTGIIRTGKTYCFIEEALYLSEIGELQLLGDEDDVVISLKDLYGEIA 112
Query: 60 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVM 119
K GC WE +EVYR+LK LGYI+GRHGVPW K +N T +
Sbjct: 113 EGKYGCCWENYEVYRYLKGLGYILGRHGVPWTTKYA----VNTTPSDEDESLCAAEF--- 165
Query: 120 DVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFL 165
++ S+ L ++ I + RPVFDVYLPN +FKKS PG+PSF+
Sbjct: 166 ---FQDRDSVTKLLSDMHICDARPVFDVYLPNSQFKKSSPGEPSFV 208
>gi|326499365|dbj|BAK06173.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 272
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 105/167 (62%), Gaps = 5/167 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AEV++ KGK+W TTGI R GK Y ++EE FLAE GAL LLD+ D+ + ++EIY KIA
Sbjct: 64 AEVLDNKGKLWLTTGITRGGKLYYNVEEIGFLAERGALVLLDDKDVTVGMEEIYRKIAGG 123
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDV 121
GCSW F+ Y+HLK LGYIVGR+GVPW +K R +T P S+ T G D
Sbjct: 124 SYGCSWLTFQAYKHLKLLGYIVGRYGVPWTIK--HSRSGEVTDSPESMDNTNLSFGRADA 181
Query: 122 EPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 168
+ + L I I+ + P F+V LPN KFKKS PG PSFL+ L
Sbjct: 182 ---ARNDITKLLKGIHIDRMYPSFEVRLPNSKFKKSSPGAPSFLVCL 225
>gi|414589893|tpg|DAA40464.1| TPA: hypothetical protein ZEAMMB73_137888 [Zea mays]
Length = 297
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 110/167 (65%), Gaps = 5/167 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AEVVE +GK+W TTG+ R GK Y ++EET FLAE+GAL LL++ D + +++IY K+A
Sbjct: 89 AEVVENRGKLWLTTGVTRAGKLYYNVEETGFLAEMGALILLNDKDETIGIEDIYGKLAGG 148
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDV 121
GCSW+ F+ Y+HLKSLGYIVGR GVPW +K G + + +++ T + +D
Sbjct: 149 NYGCSWDTFQAYKHLKSLGYIVGRFGVPWTMK--HGGTHHTIAPQINILETDQSLNRVD- 205
Query: 122 EPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 168
+ + L IQI+ + P F+VYLPN KFKKS PG PSFLL L
Sbjct: 206 --GASNDITKLLKEIQIDGICPSFEVYLPNSKFKKSSPGCPSFLLCL 250
>gi|414589896|tpg|DAA40467.1| TPA: hypothetical protein ZEAMMB73_137888 [Zea mays]
Length = 205
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 110/167 (65%), Gaps = 5/167 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AEVVE +GK+W TTG+ R GK Y ++EET FLAE+GAL LL++ D + +++IY K+A
Sbjct: 42 AEVVENRGKLWLTTGVTRAGKLYYNVEETGFLAEMGALILLNDKDETIGIEDIYGKLAGG 101
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDV 121
GCSW+ F+ Y+HLKSLGYIVGR GVPW +K G + + +++ T + +D
Sbjct: 102 NYGCSWDTFQAYKHLKSLGYIVGRFGVPWTMK--HGGTHHTIAPQINILETDQSLNRVDG 159
Query: 122 EPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 168
+ + L IQI+ + P F+VYLPN KFKKS PG PSFLL L
Sbjct: 160 ASND---ITKLLKEIQIDGICPSFEVYLPNSKFKKSSPGCPSFLLCL 203
>gi|357159225|ref|XP_003578379.1| PREDICTED: uncharacterized protein LOC100839648 [Brachypodium
distachyon]
Length = 273
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 106/167 (63%), Gaps = 5/167 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AEVV+ KGK+W TTGI R K Y ++EE FLAE GAL LLDN D + +++IY+KIA
Sbjct: 65 AEVVDSKGKLWLTTGITRGVKLYYNVEEIGFLAERGALVLLDNKDETIGMQDIYKKIAGG 124
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDV 121
GCSW+ F+ Y+HLK LGYI+GRHGVPW +K +I +S V+ D
Sbjct: 125 NYGCSWDAFQAYKHLKLLGYIIGRHGVPWTLKHSCTSEITDSSKSVT-----DTDWSFDR 179
Query: 122 EPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 168
+ + LF + I+++ P F+V+LPN KFKKS PG PSFLL L
Sbjct: 180 ANGACNDITKLFKEMHIDDIYPSFEVHLPNSKFKKSSPGLPSFLLCL 226
>gi|218202415|gb|EEC84842.1| hypothetical protein OsI_31942 [Oryza sativa Indica Group]
Length = 280
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 110/167 (65%), Gaps = 3/167 (1%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AEVV+ KGK+W TTG+ R+GK Y ++EE FLAE GAL LLD + ++EIY KIA
Sbjct: 70 AEVVDSKGKLWLTTGVNRDGKLYYNVEEIGFLAERGALVLLDYEGETIGMEEIYGKIAGG 129
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDV 121
K GCSW+ F+ Y+HLK LGYI+GR+GVPW VK + ++T S+ T + + V
Sbjct: 130 KYGCSWDAFQAYKHLKLLGYIIGRYGVPWTVK--RSHTYSVTDASTSVVETDQIQSLNRV 187
Query: 122 EPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 168
+ + + L + I+++ P F+VYLPN KFKK+ PGDPSF+L L
Sbjct: 188 D-GASNDITKLLKEMCIDDMHPSFEVYLPNSKFKKTSPGDPSFVLCL 233
>gi|212723584|ref|NP_001131753.1| hypothetical protein [Zea mays]
gi|194692434|gb|ACF80301.1| unknown [Zea mays]
gi|414589895|tpg|DAA40466.1| TPA: hypothetical protein ZEAMMB73_137888 [Zea mays]
Length = 250
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 110/167 (65%), Gaps = 5/167 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AEVVE +GK+W TTG+ R GK Y ++EET FLAE+GAL LL++ D + +++IY K+A
Sbjct: 42 AEVVENRGKLWLTTGVTRAGKLYYNVEETGFLAEMGALILLNDKDETIGIEDIYGKLAGG 101
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDV 121
GCSW+ F+ Y+HLKSLGYIVGR GVPW +K G + + +++ T + +D
Sbjct: 102 NYGCSWDTFQAYKHLKSLGYIVGRFGVPWTMK--HGGTHHTIAPQINILETDQSLNRVD- 158
Query: 122 EPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 168
+ + L IQI+ + P F+VYLPN KFKKS PG PSFLL L
Sbjct: 159 --GASNDITKLLKEIQIDGICPSFEVYLPNSKFKKSSPGCPSFLLCL 203
>gi|115480007|ref|NP_001063597.1| Os09g0504800 [Oryza sativa Japonica Group]
gi|113631830|dbj|BAF25511.1| Os09g0504800 [Oryza sativa Japonica Group]
gi|215706480|dbj|BAG93336.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641873|gb|EEE70005.1| hypothetical protein OsJ_29924 [Oryza sativa Japonica Group]
Length = 280
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 109/167 (65%), Gaps = 3/167 (1%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AEVV+ KGK+W TTG+ R+GK Y ++EE FLAE GAL LLD + ++EIY KIA
Sbjct: 70 AEVVDSKGKLWLTTGVNRDGKLYYNVEEIGFLAERGALVLLDYEGETIGMEEIYGKIAGG 129
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDV 121
K GCSW+ F+ Y+HLK LGYI+GR+GVPW VK + ++T S+ T + + V
Sbjct: 130 KYGCSWDAFQAYKHLKLLGYIIGRYGVPWTVK--RSHTYSVTDASTSVVETDQIQSLNRV 187
Query: 122 EPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 168
+ + L + I+++ P F+VYLPN KFKK+ PGDPSF+L L
Sbjct: 188 -GGASNDITKLLKEMCIDDMHPSFEVYLPNSKFKKTSPGDPSFVLCL 233
>gi|242051745|ref|XP_002455018.1| hypothetical protein SORBIDRAFT_03g003060 [Sorghum bicolor]
gi|241926993|gb|EES00138.1| hypothetical protein SORBIDRAFT_03g003060 [Sorghum bicolor]
Length = 254
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 15/167 (8%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AEVVE +GK+W TTG+ R GK Y ++EE FLAEIGAL LL + D + ++ IYEK+
Sbjct: 56 AEVVESRGKLWLTTGVTRAGKLYYNVEEIGFLAEIGALILLSDKDETIGIEGIYEKLVGG 115
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDV 121
GCSW+ F+ Y+HLKSLGYIVGR GVPW +K D + + ++
Sbjct: 116 NFGCSWDTFQAYKHLKSLGYIVGRFGVPWTMKHSGTCDTDQS---------------LNR 160
Query: 122 EPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 168
+ + L +QI+ + P F+VYLPN KFKKS PG P+FLL L
Sbjct: 161 AGGASNDITKLLKEMQIDGITPSFEVYLPNSKFKKSSPGSPTFLLCL 207
>gi|356523131|ref|XP_003530195.1| PREDICTED: uncharacterized protein LOC100799269 [Glycine max]
Length = 330
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 94/133 (70%), Gaps = 5/133 (3%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
M EV+EK GKMW TTGIVR+GK Y SIEETL+L E+GAL ++DN+ + L E+YEK+A+
Sbjct: 56 MGEVIEKNGKMWITTGIVRSGKIYSSIEETLYLMELGALDIVDNDGRSISLTEMYEKVAS 115
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMD 120
KSGC WELFEVYRHLKSLGYI+GRHGV W +K I + +++VT + + D
Sbjct: 116 GKSGCCWELFEVYRHLKSLGYIIGRHGVAWSLK-----SIKSSHKAAAVEVTEESKQLED 170
Query: 121 VEPKEESSLVALF 133
+ K E S+ L+
Sbjct: 171 TDSKSELSINKLW 183
>gi|326530256|dbj|BAJ97554.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 102/169 (60%), Gaps = 9/169 (5%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AEVV+ KGK W TTG+ R GK Y ++EE FLAE GAL LD+ + ++EIY KIA
Sbjct: 62 AEVVDSKGKPWLTTGVTRGGKLYYNVEEIGFLAERGALIFLDDEGGTIGMEEIYGKIAGG 121
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRHGVPWIVK-IPKGRDIN-ITSDPVSLQVTPKRHGVM 119
K GCSW+ F+ Y+HLK LGYI+GR+GVPW K P N + P + Q + GV
Sbjct: 122 KYGCSWDAFQAYKHLKLLGYIIGRYGVPWTTKHSPTCETTNCLEGMPGTEQSFDRATGVH 181
Query: 120 DVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 168
+ PK L + + + P ++VYLPN KF+KS PG P FLL +
Sbjct: 182 NGIPK-------LLNEVHTDGLSPSYEVYLPNSKFRKSSPGAPCFLLSM 223
>gi|242045232|ref|XP_002460487.1| hypothetical protein SORBIDRAFT_02g029155 [Sorghum bicolor]
gi|241923864|gb|EER97008.1| hypothetical protein SORBIDRAFT_02g029155 [Sorghum bicolor]
Length = 240
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 102/167 (61%), Gaps = 11/167 (6%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AEVVE G +W TTG+ R GK Y ++EE FLAE GAL LL + D + ++ IYEK+A
Sbjct: 38 AEVVESWGNIWLTTGVTRAGKLYYNVEEIGFLAERGALILLSDKDETIGIEGIYEKLAGG 97
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDV 121
GCSW+ F+ Y+ LKSLGYIVGR GVPW +K T D ++ Q+ ++++
Sbjct: 98 NYGCSWDTFQAYKQLKSLGYIVGRFGVPWTMK------HGSTCDTIAPQMN-----ILEI 146
Query: 122 EPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 168
+ + +QI+ + P F+VYLPN KFKKS G PSFLL L
Sbjct: 147 DQSLNKTTEWSLKEMQIDGISPFFEVYLPNSKFKKSSAGSPSFLLCL 193
>gi|297739629|emb|CBI29811.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 75/88 (85%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
MA VVEKKGK+W TTG+VRN KTYCSIEETLF+AE GAL+LLD+N++ + LK IY+K+A
Sbjct: 129 MAAVVEKKGKIWITTGVVRNSKTYCSIEETLFVAEQGALHLLDDNNVTISLKGIYDKVAQ 188
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGV 88
K GC WE FEVYRHLKSLGYIVG HG+
Sbjct: 189 GKCGCFWESFEVYRHLKSLGYIVGPHGI 216
>gi|6735315|emb|CAB68142.1| hypothetical protein [Arabidopsis thaliana]
Length = 240
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 100/169 (59%), Gaps = 33/169 (19%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDN-NDLCLPLKEIYEKIA 59
MAEV K+GK+WTTTGI+R+GKTYC IEE L+L+EIG L +L N +D+ +PLK++YEKIA
Sbjct: 52 MAEVEVKRGKLWTTTGIIRSGKTYCFIEEALYLSEIGELQILGNEDDIVIPLKDLYEKIA 111
Query: 60 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKI---PKGRDINITSDPVSLQVTPKRH 116
EKS +LG RHGV W +K P G + + +
Sbjct: 112 EEKS-------------VALGKTT-RHGVSWTLKDAARPNGEEESACAGEC--------- 148
Query: 117 GVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFL 165
P + ++ L ++QI + + VFDVYLPN +FKKS PG+PSF+
Sbjct: 149 ------PADNDTVTKLLGDMQICDAKAVFDVYLPNSRFKKSSPGEPSFV 191
>gi|238014748|gb|ACR38409.1| unknown [Zea mays]
Length = 212
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 92/147 (62%), Gaps = 5/147 (3%)
Query: 22 KTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGY 81
K +C ++ FLAE+GAL LL++ D + +++IY K+A GCSW+ F+ Y+HLKSLGY
Sbjct: 24 KAHCLMKTCRFLAEMGALILLNDKDETIGIEDIYGKLAGGNYGCSWDTFQAYKHLKSLGY 83
Query: 82 IVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEV 141
IVGR GVPW +K G + + +++ T + +D + + L IQI+ +
Sbjct: 84 IVGRFGVPWTMK--HGGTHHTIAPQINILETDQSLNRVD---GASNDITKLLKEIQIDGI 138
Query: 142 RPVFDVYLPNRKFKKSCPGDPSFLLYL 168
P F+VYLPN KFKKS PG PSFLL L
Sbjct: 139 CPSFEVYLPNSKFKKSSPGCPSFLLCL 165
>gi|6957701|gb|AAF32445.1| hypothetical protein [Arabidopsis thaliana]
Length = 168
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 11/135 (8%)
Query: 32 FLAEIGALYLL-DNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPW 90
+L+EIG L LL D +D+ + LK++Y +IA K GC WE +EVYR+LK LGYI+GRHGVPW
Sbjct: 39 YLSEIGELQLLGDEDDVVISLKDLYGEIAEGKYGCCWENYEVYRYLKGLGYILGRHGVPW 98
Query: 91 IVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLP 150
K +N T + ++ S+ L ++ I + RPVFDVYLP
Sbjct: 99 TTKYA----VNTTPSDEDESLCAAEFF------QDRDSVTKLLSDMHICDARPVFDVYLP 148
Query: 151 NRKFKKSCPGDPSFL 165
N +FKKS PG+PSF+
Sbjct: 149 NSQFKKSSPGEPSFV 163
>gi|168030362|ref|XP_001767692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681012|gb|EDQ67443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 91/176 (51%), Gaps = 18/176 (10%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+AEVV KKGK W TG R + IEE +F+ E G+L LL + + L E Y ++
Sbjct: 11 IAEVVVKKGKAWIVTGFTRGSRHAIFIEEAVFMVEQGSL-LLREGERVVDLLEAYSLVST 69
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVK-----IPKGRDINIT-SDPVSLQVTPK 114
GCSW ++VY +LK LGYIVGRH VPW V +P + N S V + P
Sbjct: 70 PSYGCSWNNYQVYSYLKKLGYIVGRHNVPWTVSKKRPPMPADEETNTACSQLVDSKSAPG 129
Query: 115 RHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLTC 170
+++ E SS + L Y DV+LPN +FKKS PG P+F L T
Sbjct: 130 FEVNTELQGSESSSEMKLMY-----------DVHLPNARFKKSNPGLPAFSLCTTS 174
>gi|302756839|ref|XP_002961843.1| hypothetical protein SELMODRAFT_76410 [Selaginella moellendorffii]
gi|300170502|gb|EFJ37103.1| hypothetical protein SELMODRAFT_76410 [Selaginella moellendorffii]
Length = 196
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 31/169 (18%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
MA V +GK+W TTG++R+ C++EET++L E G L +L + L E+ E +
Sbjct: 15 MARVANPRGKIWNTTGVIRSSSLLCNVEETIYLVEQGCL-ILTLQGRTMDLHEVLELLGV 73
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMD 120
EK+GCS + + VY H K+LGY+V RH V W K +P S+ D
Sbjct: 74 EKNGCSMDAYNVYSHFKALGYVVSRHNVDWTAK----------EEPESI----------D 113
Query: 121 VEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 169
E + SS + ++ VFDVY PN +F+K+ PG P F L ++
Sbjct: 114 RERDDHSS----------SSLKLVFDVYAPNSQFRKTSPGVPLFSLCVS 152
>gi|302798096|ref|XP_002980808.1| hypothetical protein SELMODRAFT_113329 [Selaginella moellendorffii]
gi|300151347|gb|EFJ17993.1| hypothetical protein SELMODRAFT_113329 [Selaginella moellendorffii]
Length = 197
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 85/166 (51%), Gaps = 30/166 (18%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
MA V +GK+W TTG++R+ C++EET++L E G L +L + L E+ E +
Sbjct: 15 MARVANPRGKIWNTTGVIRSSSLLCNVEETIYLVEQGCL-VLTLQGRTMDLHEVLELLGV 73
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMD 120
EK+GCS + + VY H K+LGY+V RH V W K + +D
Sbjct: 74 EKNGCSMDAYNVYSHFKALGYVVSRHNVDWTAK--------------------EELESID 113
Query: 121 VEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLL 166
E + SS +L + VFDVY PN +F+K+ PG P F L
Sbjct: 114 RERDDHSSSSSL---------KLVFDVYAPNSQFRKTSPGVPLFSL 150
>gi|308813556|ref|XP_003084084.1| Predicted tRNA-splicing endonuclease subunit (ISS) [Ostreococcus
tauri]
gi|116055967|emb|CAL58500.1| Predicted tRNA-splicing endonuclease subunit (ISS) [Ostreococcus
tauri]
Length = 323
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 80/221 (36%), Gaps = 55/221 (24%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIG--ALYLLDNNDLCLPLKEIYEKI 58
MAEV+ +G+ G R T+ EE FL E AL+ + + C ++ +Y +
Sbjct: 64 MAEVIRSRGRQLQRVGTARGNATWLFAEECAFLCETERLALFFDEREEECASVRAVYALM 123
Query: 59 ANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVS---------- 108
A ++G WE + Y HL+ LGY R G W V D + +
Sbjct: 124 A--RTGVGWEEYLAYAHLRRLGYGCRRFGSAWTVDARSSDDWAKETGGIGRWGDGENGDG 181
Query: 109 -----LQVTP------KRHGV------------------------------MDVEPKEES 127
++V P KR V +D + +
Sbjct: 182 VKTGEVEVEPIAEPPVKRRRVEETRKKQRDLPSRRWWLAAGDDAHDWIGPEIDAAARART 241
Query: 128 SLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYL 168
AL Y+ E R F VY PNR F K P SF +Y+
Sbjct: 242 ESHALEYDESPVEARLTFQVYQPNRHFSKKSPDPVSFYVYV 282
>gi|145355706|ref|XP_001422092.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582332|gb|ABP00409.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 334
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 59/225 (26%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIG--ALYLLDNNDLCLPLKEIYEKIA 59
AEVV +G+ +T G R + S EE FL E AL+ + ++ C ++ +Y +A
Sbjct: 72 AEVVRHRGRHFTRFGCARGDGVWLSAEECAFLVETERLALFFSEKDERCASVRAVYRLMA 131
Query: 60 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIV--------------------KIPKGRD 99
+ G S E + Y H+ LGY+ R G W + + +G D
Sbjct: 132 --RVGVSREAYLAYAHVCRLGYVCRRFGSAWTMEARASDADLVAATEGLGIWKRAREGED 189
Query: 100 INITSD----------PVSLQV--TPKRH-----------GVMDVE---PKEESSLVA-- 131
+ D P + ++ TP++ G ++ E P+ ++++ A
Sbjct: 190 GAVDDDRDAVKRRKIAPSTREIKKTPRQRELQSRRWWFASGAIEHEWIGPEIDAAIEANA 249
Query: 132 -------LFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 169
L Y+ V P F VY PNR F K P SF LY+
Sbjct: 250 KPPYAMTLEYDETPVRVAPTFQVYQPNRNFSKKSPDPVSFYLYVA 294
>gi|432867361|ref|XP_004071153.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like [Oryzias
latipes]
Length = 488
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+ E+ GK W T G +GK Y EE L+L E G++ + + DL + +++ YE +
Sbjct: 80 LVELQSPAGKFWQTAGFSADGKQYLLPEEALYLMECGSVQIF-HEDLPISIQDGYEAFLS 138
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKR 115
+ + + F+V+ HLK LGY+V R P P R +N+ PKR
Sbjct: 139 ADT-VTLQQFQVFGHLKRLGYVVHRFD-PGSEPTPYARQLNLPLSRARAGRAPKR 191
>gi|441644060|ref|XP_004093265.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit
Sen54 [Nomascus leucogenys]
Length = 282
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G+++L + DL L ++E Y+ + +
Sbjct: 33 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQEAYQLLLTDH 91
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 104
+ ++ ++V+ HLK LGY+V R P V P R +N+ +
Sbjct: 92 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDA 131
>gi|26354132|dbj|BAC40696.1| unnamed protein product [Mus musculus]
Length = 483
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L DL L ++E Y+ + E
Sbjct: 87 ELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQEAYQLLLTED 145
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ S+ ++V+ HLK LGY+V R + +V P R +N+
Sbjct: 146 T-LSFLQYQVFSHLKRLGYVVRRFQLSSVVS-PYERQLNL 183
>gi|440895191|gb|ELR47452.1| tRNA-splicing endonuclease subunit Sen54, partial [Bos grunniens
mutus]
Length = 454
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L + DL L ++E Y+ + E
Sbjct: 16 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQEAYQLLLTED 74
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 75 T-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNL 112
>gi|148702575|gb|EDL34522.1| mCG6634, isoform CRA_a [Mus musculus]
Length = 483
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L DL L ++E Y+ + E
Sbjct: 87 ELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQEAYQLLLTED 145
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ S+ ++V+ HLK LGY+V R + +V P R +N+
Sbjct: 146 T-LSFLQYQVFSHLKRLGYVVRRFQLSSVVS-PYERQLNL 183
>gi|449479344|ref|XP_002190299.2| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Taeniopygia
guttata]
Length = 459
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+ E+ GK W T G GK EE L+L E G++ L D+ L ++E YE +
Sbjct: 22 IVELKSPAGKFWHTMGFSERGKQCLLPEEALYLLECGSVQLF-YRDVALSIQEAYETLLC 80
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 104
+++ S ++V+ HLK LGYIV R P V P R +N+ S
Sbjct: 81 QEA-MSLSHYQVFSHLKQLGYIVLRFD-PSTVPSPYERQLNLES 122
>gi|426239267|ref|XP_004013547.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Ovis aries]
Length = 603
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L + DL L ++E Y+ + E
Sbjct: 165 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQEAYQLLLTED 223
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQ 110
+ ++ ++V+ HLK LGY+V R P V P R +N+ S L+
Sbjct: 224 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDSGAQCLE 269
>gi|417402385|gb|JAA48042.1| Putative trna-splicing endonuclease subunit sen54 [Desmodus
rotundus]
Length = 531
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L DL L ++E Y+ + +E
Sbjct: 90 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQEAYQLLLSED 148
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHG 117
+ ++ ++V+ HLK LGY+V R P + P R +N+ S S Q + R G
Sbjct: 149 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSAILSPYERQLNLDS---SAQSSEDRSG 198
>gi|395749454|ref|XP_003778946.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit
Sen54 [Pongo abelii]
Length = 622
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G+++L + DL L ++E Y+ + +
Sbjct: 184 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQEAYQLLLTDH 242
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 104
+ S+ ++V+ HLK LGY+V R P V P R +N+ +
Sbjct: 243 T-VSFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDA 282
>gi|444727836|gb|ELW68314.1| Lethal(2) giant larvae protein like protein 2 [Tupaia chinensis]
Length = 4077
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G + G+ EE L+L E G+L L + DL L ++E Y+ + E
Sbjct: 74 ELKTPAGKFWQTMGFSQRGRQRLHPEEALYLLECGSLQLF-HQDLPLSIQEAYQLLLTED 132
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHG 117
+ ++ ++V+ HLK LGY+V R P + P R +N+ S Q HG
Sbjct: 133 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSILSPYERQLNLAG---SAQYLKDGHG 182
>gi|355568919|gb|EHH25200.1| hypothetical protein EGK_08980, partial [Macaca mulatta]
gi|355754379|gb|EHH58344.1| hypothetical protein EGM_08170, partial [Macaca fascicularis]
Length = 452
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G+++L + DL L ++E Y+ + +
Sbjct: 16 ELKSPAGKFWQTMGFSEQGQQRLHPEEALYLLECGSIHLF-HQDLPLSIQEAYQLLLTDD 74
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 104
+ ++ ++V+ HLK LGY+V R P V P R +N+ +
Sbjct: 75 T-VTFLQYQVFSHLKRLGYVV-RRFQPSSVLSPYERQLNLDA 114
>gi|449283034|gb|EMC89737.1| tRNA-splicing endonuclease subunit Sen54, partial [Columba livia]
Length = 438
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+ E+ GK W T G GK EE L+L E G + L DL L ++E YE + +
Sbjct: 13 IVELQSPAGKFWHTMGFSERGKQCLLPEEALYLLECGYVQLF-YRDLPLSVQEAYEILLS 71
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 104
+++ S ++V+ HLK LGYIV R P V P R +N+ S
Sbjct: 72 QEA-VSLPHYQVFSHLKQLGYIVLRFD-PSTVPSPYERQLNLES 113
>gi|431908774|gb|ELK12366.1| tRNA-splicing endonuclease subunit Sen54 [Pteropus alecto]
Length = 497
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L + DL L ++E Y+ + E
Sbjct: 90 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQEAYQLLLTED 148
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKG 97
+ ++ ++V+ HLK LGY+V R I K P+
Sbjct: 149 T-VTFLQYQVFSHLKRLGYVVRRFQPRSINKKPRA 182
>gi|108389163|ref|NP_083833.1| tRNA-splicing endonuclease subunit Sen54 [Mus musculus]
gi|50401564|sp|Q8C2A2.2|SEN54_MOUSE RecName: Full=tRNA-splicing endonuclease subunit Sen54; AltName:
Full=tRNA-intron endonuclease Sen54
gi|12832975|dbj|BAB22335.1| unnamed protein product [Mus musculus]
Length = 525
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L DL L ++E Y+ + E
Sbjct: 90 ELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQEAYQLLLTED 148
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ S+ ++V+ HLK LGY+V R + +V P R +N+
Sbjct: 149 T-LSFLQYQVFSHLKRLGYVVRRFQLSSVVS-PYERQLNL 186
>gi|148702576|gb|EDL34523.1| mCG6634, isoform CRA_b [Mus musculus]
Length = 543
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L DL L ++E Y+ + E
Sbjct: 108 ELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQEAYQLLLTED 166
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ S+ ++V+ HLK LGY+V R + +V P R +N+
Sbjct: 167 T-LSFLQYQVFSHLKRLGYVVRRFQLSSVVS-PYERQLNL 204
>gi|157818699|ref|NP_001103046.1| tRNA-splicing endonuclease subunit Sen54 [Rattus norvegicus]
gi|149054798|gb|EDM06615.1| rCG32786, isoform CRA_b [Rattus norvegicus]
Length = 525
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L DL L ++E Y+ + E
Sbjct: 90 ELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQEAYQLLLTED 148
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ S+ ++V+ HLK LGY+V R + +V P R +N+
Sbjct: 149 T-LSFLQYQVFSHLKRLGYVVRRFQLSSVVS-PYERQLNL 186
>gi|147902427|ref|NP_001086697.1| tRNA splicing endonuclease 54 homolog [Xenopus laevis]
gi|50414822|gb|AAH77322.1| MGC80279 protein [Xenopus laevis]
Length = 517
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEK-IA 59
+ E+ GK W T G GK EE ++L E GA+ + D L ++E YE+ +
Sbjct: 72 LVELTSPAGKFWQTMGFTYQGKQCLLPEEAVYLLECGAVQIF-YRDSPLSVQEAYERLLG 130
Query: 60 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 104
N+K ++VY HLK LGYIV R P V+ P R +N+ S
Sbjct: 131 NQKFPVL--HYQVYSHLKRLGYIVTRFD-PSSVQSPYHRQLNLES 172
>gi|359482135|ref|XP_002278658.2| PREDICTED: uncharacterized protein LOC100258924 [Vitis vinifera]
Length = 43
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 27/31 (87%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETL 31
MA VVEKKGK+W TTG+VRN KTYCSIEET
Sbjct: 1 MAAVVEKKGKIWITTGVVRNSKTYCSIEETF 31
>gi|410981822|ref|XP_003997265.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Felis catus]
Length = 529
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L + DL L ++E Y+ + E
Sbjct: 88 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQEAYQLLLTED 146
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQ 110
+ ++ ++V+ HLK LGY+V R P + P R +N+ + L+
Sbjct: 147 T-MTFLQYQVFSHLKRLGYVVRRFQ-PSSILSPYERQLNLDGSALCLE 192
>gi|397484493|ref|XP_003813409.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Pan paniscus]
Length = 780
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G+++L + DL L ++E Y+ + +
Sbjct: 345 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQEAYQLLLTDH 403
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 104
+ ++ ++V+ HLK LGY+V R P V P R +N+ +
Sbjct: 404 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDA 443
>gi|31565520|gb|AAH53643.1| TSEN54 protein [Homo sapiens]
Length = 527
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G+++L + DL L ++E Y+ + +
Sbjct: 91 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQEAYQLLLTDH 149
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 104
+ ++ ++V+ HLK LGY+V R P V P R +N+ +
Sbjct: 150 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDA 189
>gi|29126915|gb|AAH47793.1| TRNA splicing endonuclease 54 homolog (S. cerevisiae) [Homo
sapiens]
Length = 526
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G+++L + DL L ++E Y+ + +
Sbjct: 90 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQEAYQLLLTDH 148
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 104
+ ++ ++V+ HLK LGY+V R P V P R +N+ +
Sbjct: 149 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDA 188
>gi|395532927|ref|XP_003768516.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Sarcophilus
harrisii]
Length = 542
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 9 GKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWE 68
GK W T G G+ EE ++L E G++ L DL L ++E YE + + + S+
Sbjct: 102 GKFWQTMGFSEGGQQRLYPEEAVYLLECGSIQLF-YQDLPLSIQEAYEMLLAQGTR-SFL 159
Query: 69 LFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 104
++V+ HLK LGY+V R P +V+ P R +N+ S
Sbjct: 160 QYQVFSHLKRLGYVVRRFQ-PGLVQSPYERQLNLES 194
>gi|426346868|ref|XP_004041091.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit
Sen54 [Gorilla gorilla gorilla]
Length = 573
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G+++L + DL L ++E Y+ + +
Sbjct: 137 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQEAYQLLLTDH 195
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQ 110
+ ++ ++V+ HLK LGY+V R P V P R +N+ + L+
Sbjct: 196 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDASVQHLE 241
>gi|114670473|ref|XP_001143195.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 isoform 4 [Pan
troglodytes]
gi|410209566|gb|JAA02002.1| tRNA splicing endonuclease 54 homolog [Pan troglodytes]
gi|410300108|gb|JAA28654.1| tRNA splicing endonuclease 54 homolog [Pan troglodytes]
Length = 526
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G+++L + DL L ++E Y+ + +
Sbjct: 90 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQEAYQLLLTDH 148
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQ 110
+ ++ ++V+ HLK LGY+V R P V P R +N+ + L+
Sbjct: 149 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDASVQHLE 194
>gi|108389176|ref|NP_997229.2| tRNA-splicing endonuclease subunit Sen54 [Homo sapiens]
gi|296452961|sp|Q7Z6J9.3|SEN54_HUMAN RecName: Full=tRNA-splicing endonuclease subunit Sen54; AltName:
Full=SEN54 homolog; Short=HsSEN54; AltName:
Full=tRNA-intron endonuclease Sen54
Length = 526
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G+++L + DL L ++E Y+ + +
Sbjct: 90 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQEAYQLLLTDH 148
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQ 110
+ ++ ++V+ HLK LGY+V R P V P R +N+ + L+
Sbjct: 149 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDASVQHLE 194
>gi|322788447|gb|EFZ14116.1| hypothetical protein SINV_04580 [Solenopsis invicta]
Length = 799
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
A V ++ G+ W+ G+ RNG Y EETLFL E L L+ N C +++ YE + ++
Sbjct: 93 ARVTKRSGQDWSNFGLERNGSLYLLAEETLFLMETNCLELIWNGLSC-SIQQAYEILLDD 151
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRH 86
S C+ E + VY L GY + R+
Sbjct: 152 -SACTLEEYRVYSQLTRYGYRIQRY 175
>gi|387763180|ref|NP_001248477.1| tRNA-splicing endonuclease subunit Sen54 [Macaca mulatta]
gi|380789909|gb|AFE66830.1| tRNA-splicing endonuclease subunit Sen54 [Macaca mulatta]
gi|383410101|gb|AFH28264.1| tRNA-splicing endonuclease subunit Sen54 [Macaca mulatta]
Length = 526
Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G+++L + DL L ++E Y+ + +
Sbjct: 90 ELKSPAGKFWQTMGFSEQGQQRLHPEEALYLLECGSIHLF-HQDLPLSIQEAYQLLLTDD 148
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 104
+ ++ ++V+ HLK LGY+V R P V P R +N+ +
Sbjct: 149 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDA 188
>gi|296203185|ref|XP_002748826.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Callithrix
jacchus]
Length = 530
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L + DL L ++E Y+ + +
Sbjct: 94 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQEAYQLLLTDD 152
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 153 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLFPYERQLNL 190
>gi|329664214|ref|NP_001192620.1| tRNA-splicing endonuclease subunit Sen54 [Bos taurus]
gi|296476024|tpg|DAA18139.1| TPA: hypothetical protein BOS_19481 [Bos taurus]
Length = 528
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L + DL L ++E Y+ + E
Sbjct: 90 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQEAYQLLLTED 148
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 149 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNL 186
>gi|344291428|ref|XP_003417437.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Loxodonta
africana]
Length = 1035
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G + G+ EE L+L E G++ L DL L ++E Y+ + E
Sbjct: 103 ELQSPAGKFWQTMGFSQQGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQEAYQLLLTED 161
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQ 110
+ ++ ++V+ HLK LGY+V R P V P R +N+ L+
Sbjct: 162 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDGSAQDLE 207
>gi|327265017|ref|XP_003217305.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like [Anolis
carolinensis]
Length = 554
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+ E+ GK W T G + GK EE L+L E G++ L DL L ++E YE +
Sbjct: 104 IVELKSPAGKFWHTMGFMDQGKQCLLPEEALYLLECGSIQLF-YKDLPLSIQEAYENLLT 162
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGR 85
+KS S ++V+ HLK LGYIV R
Sbjct: 163 QKS-MSLLKYQVFCHLKRLGYIVLR 186
>gi|345804620|ref|XP_540434.3| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Canis lupus
familiaris]
Length = 531
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L + DL L ++E Y+ + E
Sbjct: 90 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQEAYQLLLTED 148
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQ 110
+ ++ ++V+ HLK LGY+V R P + P R +N+ L+
Sbjct: 149 A-VTFLQYQVFSHLKRLGYVVRRFQ-PGSILSPYERQLNLDGSAQCLE 194
>gi|194216659|ref|XP_001916857.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like [Equus
caballus]
Length = 537
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L + DL L ++E Y+ + E
Sbjct: 97 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQEAYQLLLTED 155
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ ++ ++V+ HLK LGY+V R P + P R +N+
Sbjct: 156 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSILSPYERQLNL 193
>gi|126308739|ref|XP_001377652.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Monodelphis
domestica]
Length = 549
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 9 GKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWE 68
GK W T G G+ EE L+L E G++ L DL L ++E YE + + + +
Sbjct: 106 GKFWQTMGFSEGGQQRLYPEEALYLLECGSIQLF-YQDLPLSIQEAYEMLLTQDT-IGFL 163
Query: 69 LFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHG 117
++V+ HLK LGY+V R P +V P R +N+ D + + + K HG
Sbjct: 164 QYQVFSHLKRLGYVVRRFQ-PSLVPSPYERQLNL--DCGNSRSSEKWHG 209
>gi|281350036|gb|EFB25620.1| hypothetical protein PANDA_008571 [Ailuropoda melanoleuca]
Length = 512
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L + DL L ++E Y+ + E
Sbjct: 72 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQEAYQLLLTED 130
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ ++ ++ + HLK LGY+V R P + P R +N+
Sbjct: 131 T-MTFLQYQAFSHLKRLGYVV-RRFQPSSILSPYERQLNL 168
>gi|402901077|ref|XP_003913483.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Papio anubis]
Length = 528
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G+++L + DL L ++E Y+ +
Sbjct: 92 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQEAYQLLLTGD 150
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 104
+ ++ ++V+ HLK LGY+V R P V P R +N+ +
Sbjct: 151 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNLDA 190
>gi|291238835|ref|XP_002739332.1| PREDICTED: tRNA splicing endonuclease 54 homolog [Saccoglossus
kowalevskii]
Length = 650
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+AE+ +KGK W T G N K + EE LFL G+L L N + L ++E Y +
Sbjct: 106 LAELTLEKGKFWNTMGHHINDKKWLLPEEALFLMNGGSLELYCNG-VPLSIQEAYSILIP 164
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRH 86
E E ++VY HL+ LGYIV RH
Sbjct: 165 EY--VPIEYYQVYSHLQRLGYIVIRH 188
>gi|149054797|gb|EDM06614.1| rCG32786, isoform CRA_a [Rattus norvegicus]
Length = 174
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L DL L ++E Y+ + E
Sbjct: 90 ELTSPAGKFWQTMGYSEEGRQRLHPEEALYLLECGSIQLF-YQDLPLSIQEAYQLLLTED 148
Query: 63 SGCSWELFEVYRHLKSLGYIVGR 85
+ S+ ++V+ HLK LGY+V R
Sbjct: 149 T-LSFLQYQVFSHLKRLGYVVRR 170
>gi|355726523|gb|AES08899.1| tRNA splicing endonuclease 54-like protein [Mustela putorius furo]
Length = 480
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 9 GKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWE 68
GK W T G G+ EE L+L E G++ L + DL L ++E Y+ + E + ++
Sbjct: 46 GKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQEAYQLLLTEDT-VTFL 103
Query: 69 LFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
++ + HLK LGY+V R P + P R +N+
Sbjct: 104 QYQAFSHLKRLGYVV-RRFQPSSILSPYERQLNL 136
>gi|410903091|ref|XP_003965027.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like [Takifugu
rubripes]
Length = 432
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+ E+ GK W T G GK EE L+L E G L + DL +++ YE +
Sbjct: 86 IVELQTPAGKFWQTMGFSSEGKQRLLPEEALYLMECGNLQVF-YQDLPFSIQDGYESFLS 144
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDIN--ITSDPVSLQVTPKR 115
S S + ++V+ HLK LGY+V R P +V R +N ++ D Q+ KR
Sbjct: 145 -PSTVSLQQYQVFAHLKRLGYVVHRFD-PSLVPSSYTRQLNLPLSRDRAGRQLKRKR 199
>gi|348510002|ref|XP_003442535.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like
[Oreochromis niloticus]
Length = 512
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+ E+ GK W T G NGK EE L+L E G L + DL L +++ YEK +
Sbjct: 86 IVELQSPAGKFWQTMGFSANGKQCLLPEEALYLMECGNLQVF-YQDLPLSIQDGYEKFLS 144
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGR 85
+ S + ++V+ HLK LGY+V R
Sbjct: 145 ANT-VSLQQYQVFGHLKRLGYVVLR 168
>gi|301768977|ref|XP_002919930.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like
[Ailuropoda melanoleuca]
Length = 528
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G++ L + DL L ++E Y+ + E
Sbjct: 88 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQEAYQLLLTED 146
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQ 110
+ ++ ++ + HLK LGY+V R P + P R +N+ L+
Sbjct: 147 T-MTFLQYQAFSHLKRLGYVVRRFQ-PSSILSPYERQLNLDGSAQCLE 192
>gi|242017366|ref|XP_002429160.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514038|gb|EEB16422.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 245
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIY-EKIA 59
MAEVV + G W G V N K Y EE L+L E G L L N+L L ++ Y +
Sbjct: 73 MAEVVRQIGSHWFKMGHVINKKLYIYPEEALYLLECGHLE-LTYNELPLSIQRAYFLLLE 131
Query: 60 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPK 96
N ++G S E + VY +L S G+ V RH + K K
Sbjct: 132 NGENGVSLENYRVYSYLNSAGFKVLRHSSNKVFKHKK 168
>gi|354466567|ref|XP_003495745.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like
[Cricetulus griseus]
Length = 605
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
++ GK W T G G+ EE L+L E G++ L DL L ++E Y+ + E
Sbjct: 171 QLTSPAGKFWQTMGYSEQGQQRLHPEEALYLLECGSIQLF-YQDLPLSIQEAYQLLLTED 229
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ S+ ++V+ HLK LGY+V R + ++ P + +N+
Sbjct: 230 T-LSFLHYQVFSHLKRLGYVVRRFQLSSVLS-PYEKQLNL 267
>gi|344236244|gb|EGV92347.1| tRNA-splicing endonuclease subunit Sen54 [Cricetulus griseus]
Length = 629
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
++ GK W T G G+ EE L+L E G++ L DL L ++E Y+ + E
Sbjct: 167 QLTSPAGKFWQTMGYSEQGQQRLHPEEALYLLECGSIQLF-YQDLPLSIQEAYQLLLTED 225
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ S+ ++V+ HLK LGY+V R + ++ P + +N+
Sbjct: 226 T-LSFLHYQVFSHLKRLGYVVRRFQLSSVLS-PYEKQLNL 263
>gi|348550449|ref|XP_003461044.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Cavia
porcellus]
Length = 526
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+ E+ GK W T G G+ EE L+L E G++ L DL L ++E Y+ +
Sbjct: 88 LVELKSPAGKFWQTMGFSEEGRQLLHPEEALYLLECGSIQLF-YEDLPLSIQEAYQLLLT 146
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 147 GDT-VTFLQYQVFSHLKRLGYVVQRFQ-PSSVLSPYERQLNL 186
>gi|351707854|gb|EHB10773.1| tRNA-splicing endonuclease subunit Sen54 [Heterocephalus glaber]
Length = 520
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G EE L+L E G++ L + DL L ++E Y+ +
Sbjct: 85 ELKSPAGKFWQTMGFSEQGHQRLHPEEALYLLECGSIQLF-HQDLPLSIQEAYQLLLTGD 143
Query: 63 SGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ ++ ++V+ HLK LGY+V R P V P R +N+
Sbjct: 144 T-VTFLQYQVFSHLKRLGYVVRRFQ-PSSVLSPYERQLNL 181
>gi|118099953|ref|XP_420129.2| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Gallus gallus]
Length = 512
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+ E+ GK W T G GK EE L+L E G+L L D+ + ++E YE + +
Sbjct: 69 VVELESPAGKFWHTMGFSERGKQCLLPEEALYLLECGSLQLF-YKDVPMSVREAYEILLS 127
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 104
+++ + ++V+ HLK LG+IV R P V P R +N+ S
Sbjct: 128 QEA-MNLLHYQVFSHLKQLGFIVLRFN-PSTVLSPYERQLNLES 169
>gi|326931089|ref|XP_003211668.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like [Meleagris
gallopavo]
Length = 512
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+ E+ GK W T G GK EE L+L E G+L L D+ + ++E YE + +
Sbjct: 69 IVELESPAGKFWHTMGFSERGKQCLLPEEALYLLECGSLQLF-YKDVPMSVQEAYEILLS 127
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITS 104
+++ S ++V+ HLK LGYIV R P V R +N+ S
Sbjct: 128 QEA-MSLLHYQVFSHLKQLGYIVLRFN-PSTVLSSCERQLNLES 169
>gi|332017031|gb|EGI57830.1| tRNA-splicing endonuclease subunit Sen54 [Acromyrmex echinatior]
Length = 796
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
A V ++ G+ W+ G+ RNG Y EE LFL E L L+ N C +++ YE + ++
Sbjct: 93 ALVTKRSGQDWSNFGLERNGSLYLLPEEALFLIETNCLELIWNGLSC-SIQQAYEILIDD 151
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRH 86
S C+ E + VY L GY + R+
Sbjct: 152 -SVCTLEEYRVYSQLTRYGYRIQRY 175
>gi|297739628|emb|CBI29810.3| unnamed protein product [Vitis vinifera]
Length = 64
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 122 EPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 169
E K++ S++ L N+ I +V+ VFDVYLPN KF+KS GDPS ++
Sbjct: 5 ESKDKISIIELVNNVHITKVKLVFDVYLPNSKFRKSFSGDPSIPYFIN 52
>gi|307204249|gb|EFN83046.1| tRNA-splicing endonuclease subunit Sen54 [Harpegnathos saltator]
Length = 814
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
A V +K G+ W++ GI +NG Y EE LFL E L L+ N C +++ YE + ++
Sbjct: 93 ALVTKKSGQDWSSFGIDKNGSLYLIPEEALFLLETNCLELIWNGVPC-SIQQAYEILIDD 151
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINI 102
+ C+ + + VY L GY + R+ VK K D ++
Sbjct: 152 EV-CTLDEYRVYSQLTRCGYRMQRYVYEESVKNDKSDDSSV 191
>gi|307189196|gb|EFN73644.1| tRNA-splicing endonuclease subunit Sen54 [Camponotus floridanus]
Length = 807
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
A V ++ G+ W G+ +NG Y EETLFL E L L+ N C +++ YE + ++
Sbjct: 93 ALVTKRSGQEWNNFGLEKNGSLYLLPEETLFLIETNCLELIWNGVPC-SIQQAYEILIDD 151
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRH 86
S C+ + + VY L GY + R+
Sbjct: 152 -SVCTLDEYRVYSQLTRYGYRIQRY 175
>gi|281204309|gb|EFA78505.1| hypothetical protein PPL_09157 [Polysphondylium pallidum PN500]
Length = 476
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 4 VVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKS 63
V+ +KG+ + + G GK Y IEE ++LA IGA+ + D L L+E Y+ +
Sbjct: 99 VINRKGRYYESMGHTVGGKLYLHIEEAMYLASIGAMEIY-YKDAPLVLQECYKLFETDYC 157
Query: 64 GCSWELFEVYRHLKSLGYIVGRH 86
+ ++VY LK GY + R+
Sbjct: 158 NFPFSNYQVYSFLKKQGYHLLRY 180
>gi|193783579|dbj|BAG53490.1| unnamed protein product [Homo sapiens]
Length = 197
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 16 GIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRH 75
G G+ EE L+L E G+++L + DL L ++E Y+ + + + ++ ++V+ H
Sbjct: 2 GFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQEAYQLLLTDHT-VTFLQYQVFSH 59
Query: 76 LKSLGYIVGRHGVPWIVKIPKGRDINITS 104
LK LGY+V R P V P R +N+ +
Sbjct: 60 LKRLGYVV-RRFQPSSVLSPYERQLNLDA 87
>gi|350412198|ref|XP_003489569.1| PREDICTED: hypothetical protein LOC100750076 [Bombus impatiens]
Length = 830
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
A+V + G+ W++ G+ ++G Y EE LFL E L L ND+ L +++ Y+ + +
Sbjct: 93 AKVTKYSGQDWSSFGLEKSGTLYLIPEEALFLLEANCLELTW-NDVALSIQQAYDLLI-D 150
Query: 62 KSGCSWELFEVYRHLKSLGYIVGR 85
CS E + VY L GY + R
Sbjct: 151 NVECSLEEYRVYSQLVRYGYRIQR 174
>gi|383859752|ref|XP_003705356.1| PREDICTED: uncharacterized protein LOC100882338 [Megachile
rotundata]
Length = 826
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
A+V + G+ W++ G+ +NG Y EE LFL E L L ND+ L +++ Y+ + +
Sbjct: 93 AKVKKHSGQDWSSFGLEKNGALYLIPEEALFLLEANCLE-LTWNDVPLSIQQAYDLLIDN 151
Query: 62 KSGCSWELFEVYRHLKSLGYIVGR 85
CS E + VY L GY + R
Sbjct: 152 IE-CSLEEYRVYSQLVRYGYHIQR 174
>gi|380028352|ref|XP_003697868.1| PREDICTED: uncharacterized protein LOC100864327 [Apis florea]
Length = 813
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
A+V + G+ W++ G+ ++G Y EE LFL E L L ND+ L +++ YE + +
Sbjct: 93 AKVKKYSGQDWSSFGLEKSGTLYLIPEEALFLLETNCLELTW-NDVSLSIQQAYELLI-D 150
Query: 62 KSGCSWELFEVYRHLKSLGYIVGR 85
CS E + VY L GY + R
Sbjct: 151 NVECSLEEYRVYSQLIRHGYRIQR 174
>gi|213402499|ref|XP_002172022.1| tRNA-splicing endonuclease subunit sen54 [Schizosaccharomyces
japonicus yFS275]
gi|212000069|gb|EEB05729.1| tRNA-splicing endonuclease subunit sen54 [Schizosaccharomyces
japonicus yFS275]
Length = 411
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 78/203 (38%), Gaps = 41/203 (20%)
Query: 2 AEVVEKKGKMWTTTG-IVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
AEV+ G M+ T G N + EET++L E G++ + + L+ +Y A
Sbjct: 95 AEVLHAHGPMFKTMGHATSNNSVWLLPEETVYLVERGSMECWCEEGIPMSLQHVY---AE 151
Query: 61 EKSGCS-WELFEVYRHLKSLGYIVGRHGVP--------WIVKIPKGRDINITS------- 104
+ C E + VY HL+ G+ V R P + K GR +
Sbjct: 152 AIAACGGLEYYHVYAHLRRCGFTVVRSKQPSPEDVEAYQLKKQMYGRSLRTLMLDLKSKL 211
Query: 105 -------------DPVSLQVT--PKRHGVMDVEPKEESSLVALFYNIQINEVRP------ 143
P S++ + P R + E+ VA + V P
Sbjct: 212 LNFSFVAFQRLWFSPSSMKKSMLPDRTYRSYEQIYEQIQFVAGYTPQPKAPVLPDLPFRN 271
Query: 144 VFDVYLPNRKFKKSCPGDPSFLL 166
FDVY P+ FKKS PG+P F +
Sbjct: 272 AFDVYKPSASFKKSAPGEPDFTV 294
>gi|452821061|gb|EME28096.1| tRNA-splicing endonuclease subunit Sen54 isoform 1 [Galdieria
sulphuraria]
Length = 236
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 8 KGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSW 67
KGK++ T G + K Y E LFL +IG L L + ++ Y+ +A E +G W
Sbjct: 74 KGKIFQTLGYFESSKQYLDPLEVLFLVDIGILQ-LQVGETTASVQLAYQ-LAVE-AGVDW 130
Query: 68 ELFEVYRHLKSLGYIV 83
F VY HL+ LG+IV
Sbjct: 131 NAFLVYAHLRRLGFIV 146
>gi|452821062|gb|EME28097.1| tRNA-splicing endonuclease subunit Sen54 isoform 2 [Galdieria
sulphuraria]
Length = 243
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 8 KGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSW 67
KGK++ T G + K Y E LFL +IG L L + ++ Y+ +A E +G W
Sbjct: 81 KGKIFQTLGYFESSKQYLDPLEVLFLVDIGILQ-LQVGETTASVQLAYQ-LAVE-AGVDW 137
Query: 68 ELFEVYRHLKSLGYIV 83
F VY HL+ LG+IV
Sbjct: 138 NAFLVYAHLRRLGFIV 153
>gi|328780760|ref|XP_001121123.2| PREDICTED: hypothetical protein LOC725252 [Apis mellifera]
Length = 813
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
A+V + G+ W++ G+ ++G Y EE LFL E L L ND+ L +++ YE + +
Sbjct: 93 AKVKKYSGQDWSSFGLEKSGILYLIPEEALFLLETNCLELTW-NDVSLSIQQAYELLI-D 150
Query: 62 KSGCSWELFEVYRHLKSLGYIVGR 85
CS E + VY L GY + R
Sbjct: 151 NIECSLEEYRVYSQLIRHGYRIQR 174
>gi|443688487|gb|ELT91160.1| hypothetical protein CAPTEDRAFT_229033 [Capitella teleta]
Length = 461
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 3 EVVEKK-GKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
EV+ K + W G V G+ + EE LFL + G + + + ++ L L++ Y N
Sbjct: 79 EVISKAMHQFWKVMGHVEEGRFWLQPEEALFLMDEGVVEIY-HGEVPLSLQQAYGMFLN- 136
Query: 62 KSGCSW---ELFEVYRHLKSLGYIVGRH 86
CS E ++VY HL LGYIV RH
Sbjct: 137 ---CSTLPPERYQVYSHLCRLGYIVRRH 161
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 141 VRPVFDVYLPNRKFKKSCPGDPSF 164
V PVFDV+LPN FKK+ PG P
Sbjct: 382 VSPVFDVHLPNANFKKTNPGTPDL 405
>gi|156403005|ref|XP_001639880.1| predicted protein [Nematostella vectensis]
gi|156227011|gb|EDO47817.1| predicted protein [Nematostella vectensis]
Length = 326
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 43/209 (20%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
M ++ KG W G+ N + + EE LFL E G+L L + L L++ + +
Sbjct: 77 MIKIEAAKGTHWNHFGVTINSVLWAAPEEALFLLEQGSLELY-YGGMPLTLQQAFSILLP 135
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDP---VSLQVTPKRHG 117
+ + + VY +L LG+IV +H R N T+D S V+
Sbjct: 136 HM--FTLDHYIVYAYLLRLGFIVVKHHKK---SFRGSRQSNATADEKGNRSTDVSSSSIQ 190
Query: 118 VMD--------------------VEPKEESSLVALFYNIQINEVRPV------------- 144
V D + P + S A+ +Q+ + + +
Sbjct: 191 VSDTIMSSPAACLWKDESGCKPLLRPSDARSTAAVLSKLQVVKTQRMTSTAAQASKYLIA 250
Query: 145 FDVYLPNRKFKKSCPGDPSFLLYLTCKYV 173
FDVY P +KK+ PG P ++ C+++
Sbjct: 251 FDVYQPGSGYKKTTPGSP-YICICICRFL 278
>gi|440803060|gb|ELR23972.1| hypothetical protein ACA1_143320 [Acanthamoeba castellanii str.
Neff]
Length = 202
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+ ++ KG+ + T G + + +EE +FLA+ L +L ++D+ L L +++ ++
Sbjct: 46 LVQLTTNKGQWFKTMGFSHGKEEFYHVEEAVFLADQALLRIL-HHDVELSLAQVFRLLS- 103
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVP 89
+ G + + Y HL LG+I+ R +P
Sbjct: 104 -EGGVPLDHYIAYAHLTRLGFILARTRLP 131
>gi|307106273|gb|EFN54519.1| hypothetical protein CHLNCDRAFT_135249 [Chlorella variabilis]
Length = 416
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 31/120 (25%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+AEVV +KGK+ G +R K Y IEE A+YLLD +L L L + + +
Sbjct: 65 LAEVVLQKGKLLAHMGFMRGSKLYLFIEE--------AVYLLDRANLLLFLHQAHSGTDS 116
Query: 61 E-----------------------KSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKG 97
+G S + + V+ L GYIV RH W+++ +G
Sbjct: 117 SGRRWQQSQQQRLLSLAEAHDLMLATGVSMDRYLVFCKLLRAGYIVQRHPARWLLRPGEG 176
>gi|195493787|ref|XP_002094563.1| GE20138 [Drosophila yakuba]
gi|194180664|gb|EDW94275.1| GE20138 [Drosophila yakuba]
Length = 524
Score = 43.5 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 54/226 (23%), Positives = 86/226 (38%), Gaps = 70/226 (30%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLC---LPLKEIYEK 57
+AEV+ K GK + G GK Y E +FL E+G L L + C + +++ Y
Sbjct: 88 VAEVIRKDGK-FENFGYSEQGKLYLEYYEAMFLLEVGRLQL----EYCGSVVSIEQAYVL 142
Query: 58 IANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIP------------------KGRD 99
+ E + + VY L GYIV +H P +IP K D
Sbjct: 143 LLGELESERYSNYLVYSALSRSGYIVVKHVRPQ--EIPQEVTKKRMEDVKERITSQKTED 200
Query: 100 INITSDPVSLQVTPKRHGVMDVEPKEESS----------------------------LVA 131
NI + + LQ +R + D P +E + +
Sbjct: 201 PNIVVERIDLQFG-QRKRMADERPIKEPASKKEKLSTQGRSLVDQLKSEFTYAKFEDIFE 259
Query: 132 LFYNIQI-------------NEVRPVFDVYLPNRKFKKSCPGDPSF 164
F +Q+ + ++ +FD++L N+ FKKS P P+F
Sbjct: 260 KFEMVQLKTQDYTKEELDTPSALKIIFDLHLHNKGFKKSAPTTPNF 305
>gi|66472688|ref|NP_001018365.1| tRNA-splicing endonuclease subunit Sen54 [Danio rerio]
gi|63102342|gb|AAH95056.1| Zgc:109927 [Danio rerio]
Length = 397
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 16 GIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRH 75
G GK Y EE L+L E G + + DL L +++ YE+ + + + ++V+ H
Sbjct: 2 GFSERGKQYLQPEEALYLMECGNVQVF-YRDLPLSIQDGYERFLSSDT-VTLHQYQVFGH 59
Query: 76 LKSLGYIVGR 85
LK LGY+V R
Sbjct: 60 LKRLGYVVNR 69
>gi|195127429|ref|XP_002008171.1| GI11967 [Drosophila mojavensis]
gi|193919780|gb|EDW18647.1| GI11967 [Drosophila mojavensis]
Length = 526
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AEVV K GK + + G + GK Y E LFL E+ L L + L + +++ Y + E
Sbjct: 87 AEVVRKDGK-FESFGYSQQGKLYLEYYEALFLLELNRLQL-EYCGLIVSIEQAYVLLLGE 144
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRH 86
++ + + VY L GYIV RH
Sbjct: 145 EASEKYNNYFVYSALSRAGYIVVRH 169
>gi|414589894|tpg|DAA40465.1| TPA: hypothetical protein ZEAMMB73_137888 [Zea mays]
Length = 134
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEET 30
AEVVE +GK+W TTG+ R GK Y ++EET
Sbjct: 89 AEVVENRGKLWLTTGVTRAGKLYYNVEET 117
>gi|443900185|dbj|GAC77512.1| predicted tRNA-splicing endonuclease subunit [Pseudozyma antarctica
T-34]
Length = 649
Score = 43.1 bits (100), Expect = 0.044, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 28/133 (21%)
Query: 2 AEVVEKKGKMWTTTGIVR-------NGKTYCSI------EETLFLAEIGALYLL---DNN 45
A + + +GK++ T G++R GKT EE LFLAE G+L + +++
Sbjct: 148 ARIHDVQGKIFETVGVIRRTPTTDSTGKTVTQATNELLPEEALFLAERGSLQIYTQAEDS 207
Query: 46 DLCLP--LKEIYEKI--ANEKSG---CSWELFEVYRHLKSLGYIVGRHGVPWIVK---IP 95
D P L++ + + A++++ + E + +Y HLK LGY+V R + V+ IP
Sbjct: 208 DALAPMSLQQAFAALMLASDEAADEPLTREAYLIYAHLKRLGYVVQRASIVDAVRAAPIP 267
Query: 96 --KGRDINITSDP 106
K R I +DP
Sbjct: 268 PSKARAQGIVADP 280
>gi|357612466|gb|EHJ68012.1| putative tRNA splicing endonuclease 54-like protein [Danaus
plexippus]
Length = 832
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+AEV K G W G + Y EE LFL E+ LY ND+ + L++ Y
Sbjct: 114 LAEVTHKVGGHWQHMGHNIGKQLYIRAEEILFLMELNCLY-FKFNDVVVSLQQAYSLFLG 172
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRH 86
S + ++VY L LGY V RH
Sbjct: 173 --PLISHQQYKVYASLSRLGYRVYRH 196
>gi|390368532|ref|XP_003731466.1| PREDICTED: uncharacterized protein LOC100890147 [Strongylocentrotus
purpuratus]
Length = 711
Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 4 VVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKS 63
V KGK W T G + G+ Y EE LFL E+G++ L L ++ Y + +
Sbjct: 92 VKNHKGKFWRTMGYMLQGQKYLYPEEGLFLLEVGSME-LQYGGTPLSVQRAYNLMI--PT 148
Query: 64 GCSWELFEVYRHLKSLGYIVGRH 86
E + VY +L LGYI RH
Sbjct: 149 YIDKEHYRVYCNLMRLGYITTRH 171
>gi|390361355|ref|XP_001198123.2| PREDICTED: uncharacterized protein LOC762484 [Strongylocentrotus
purpuratus]
Length = 1112
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 4 VVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKS 63
V KGK W T G + G+ Y EE LFL E+G++ L L ++ Y + +
Sbjct: 441 VKNHKGKFWRTMGYMLQGQKYLYPEEGLFLLEVGSME-LQYGGTPLSVQRAYNLMI--PT 497
Query: 64 GCSWELFEVYRHLKSLGYIVGRH 86
E + VY +L LGYI RH
Sbjct: 498 YIDKEHYRVYCNLMRLGYITTRH 520
>gi|395330918|gb|EJF63300.1| hypothetical protein DICSQDRAFT_102452 [Dichomitus squalens
LYAD-421 SS1]
Length = 464
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 28 EETLFLAEIGALYLLDNNDLCLPLKEIYEKIA----------NEKSGC---SWELFEVYR 74
EE L+L E GA+Y DL LP E+ + + E G ++E ++VY
Sbjct: 145 EEALYLVERGAMYCWSPTDLPLPKSELLDDLEGIPMSVQQAYTEMIGTEDLTFERYQVYA 204
Query: 75 HLKSLGYIVGRHGVP 89
+LK LGY+V R P
Sbjct: 205 YLKRLGYVVTRTTPP 219
>gi|195440941|ref|XP_002068293.1| GK13237 [Drosophila willistoni]
gi|194164378|gb|EDW79279.1| GK13237 [Drosophila willistoni]
Length = 262
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+ EV++K GK + G GK Y E LFL E+ L L ++ + L +++ Y +
Sbjct: 87 VVEVLKKDGK-FEHFGYSHKGKFYLEYYEALFLVELNRLQL-EHEGMILSMEQNYNFLLG 144
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVP------WIVKIP 95
+ + + VY L LGYIV RH P WI+ P
Sbjct: 145 PAACDRYNHYLVYSCLSRLGYIVVRHRKPEAPPILWIIGGP 185
>gi|225581212|gb|ACN94779.1| GA19014 [Drosophila miranda]
Length = 539
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AE++ K GK + G +GK Y E LFL E+G L L + +D+ + +++ Y + E
Sbjct: 90 AEILRKDGK-FGCFGYSVHGKLYLEYYEALFLLELGRLQL-EYHDVTVSVEQAYVLLLGE 147
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRH 86
+ + VY L GYIV RH
Sbjct: 148 LESEKYHNYLVYSALSRAGYIVVRH 172
>gi|339238555|ref|XP_003380832.1| tRNA-splicing endonuclease subunit Sen54 [Trichinella spiralis]
gi|316976203|gb|EFV59531.1| tRNA-splicing endonuclease subunit Sen54 [Trichinella spiralis]
Length = 360
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 8 KGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSW 67
KGK+W G GK + EE L+L + A +L+N L + E K +E ++
Sbjct: 90 KGKLWKHMGRTVGGKRHLYPEEALYLLCMCAAIVLENGRP-LSVAEALHKFFDE--SITY 146
Query: 68 ELFEVYRHLKSLGYIVGRH 86
E +Y HL+ GYIV RH
Sbjct: 147 EHCVLYFHLRKSGYIVIRH 165
>gi|198464759|ref|XP_001353358.2| GA19014 [Drosophila pseudoobscura pseudoobscura]
gi|198149866|gb|EAL30865.2| GA19014 [Drosophila pseudoobscura pseudoobscura]
Length = 539
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AE++ K GK + + G K Y E LFL E+G L L+ +D+ + +++ Y + E
Sbjct: 90 AEILRKDGK-FGSFGYSVQSKLYLEYYEALFLLELGRLQ-LEYHDMTVSVEQAYVLLLGE 147
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRH 86
+ + VY L GYIV RH
Sbjct: 148 LESEKYHNYLVYSALSRAGYIVVRH 172
>gi|219117099|ref|XP_002179344.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409235|gb|EEC49167.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 340
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 24 YCSIEETLFLAEIGAL--YLLDNNDLCLPLK-----EIYEKIANEKSGCSWELFEVYRHL 76
Y IEE LFL E G L Y L+N DL +K +Y+ + E G + + VY HL
Sbjct: 120 YLFIEEVLFLFERGLLEAYELENQDLDRSVKPLDPFALYQML--EPLGVTLPTYLVYAHL 177
Query: 77 KSLGYIVGRHGVPWIVKIPKGRDI---NITSDPVSLQVTPKRHGVMDVEPK-EESSLVAL 132
++ + RH + +D N T+ V + + + D+ + E SL A
Sbjct: 178 RAQTFRTVRHSSVRRSILDAMQDALPPNQTA--VERKRALQSEAMKDLRQQLREESLRAQ 235
Query: 133 FYNIQINEVRP--VFDVYLPNRKFKKSCPGDPSF 164
Y I I FDVY P + +S PG P +
Sbjct: 236 SYRIPIASQGHGVAFDVYRPESDYTRSRPGLPDY 269
>gi|296424143|ref|XP_002841609.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637854|emb|CAZ85800.1| unnamed protein product [Tuber melanosporum]
Length = 395
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 1 MAEVVEKKGKMWTTTGIV-RNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIA 59
MAEV +G + T G R G + EET++L E G L + + L+ +Y A
Sbjct: 95 MAEVHVARGPHFKTVGKADRRGVLWLLPEETIYLVERGNLECWWEEGVPMSLQGVY---A 151
Query: 60 NEKSGCS-WELFEVYRHLKSLGYIVGR 85
+ GC E ++VY +LK GYI+ R
Sbjct: 152 SALDGCGGLERYQVYTYLKRAGYILAR 178
>gi|195160483|ref|XP_002021105.1| GL25009 [Drosophila persimilis]
gi|194118218|gb|EDW40261.1| GL25009 [Drosophila persimilis]
Length = 539
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AE++ K GK + + G K Y E LFL E+G L L+ +D+ + +++ Y + E
Sbjct: 90 AEILRKDGK-FGSFGYSVQSKLYLEYYEALFLLELGRLQ-LEYHDVTVSVEQAYVLLLGE 147
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRH 86
+ + VY L GYIV RH
Sbjct: 148 LESEKYHNYLVYSALSRAGYIVVRH 172
>gi|195376369|ref|XP_002046969.1| GJ12192 [Drosophila virilis]
gi|194154127|gb|EDW69311.1| GJ12192 [Drosophila virilis]
Length = 561
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
EV+ K GK + + G + GK Y E LFL E+ L L+ D+ + +++ Y + E
Sbjct: 88 EVLRKDGK-FESFGYSQQGKFYLEYYEALFLLELNRLQ-LEYCDMIVSVEQAYVLLLGEA 145
Query: 63 SGCSWELFEVYRHLKSLGYIVGRH 86
+ + + VY L GYIV +H
Sbjct: 146 ASDKYNNYLVYSALSRAGYIVVKH 169
>gi|156847188|ref|XP_001646479.1| hypothetical protein Kpol_1048p52 [Vanderwaltozyma polyspora DSM
70294]
gi|156117156|gb|EDO18621.1| hypothetical protein Kpol_1048p52 [Vanderwaltozyma polyspora DSM
70294]
Length = 472
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 1 MAEVVEKKGKMWTTTGIV-RNGKTYCSIEETLFLAEIGALY---------LLDNNDLCLP 50
+A + KG T G V + G Y + E L+LAE G + + + N+ L
Sbjct: 109 VAIIPHPKGNFLQTIGRVDKTGICYLNFLEFLYLAERGTVTPFLCNDLNDITNGNEYQLS 168
Query: 51 LKEIYEKIANEKSGCSWELFEVYRHLKSLGYIV 83
++EIY KS + F+VY HLK LG+IV
Sbjct: 169 IQEIYSFF---KSQNEMDNFQVYAHLKRLGFIV 198
>gi|21753535|dbj|BAC04362.1| unnamed protein product [Homo sapiens]
Length = 177
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYE 56
E+ GK W T G G+ EE L+L E G+++L + DL L ++E Y+
Sbjct: 90 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIHLF-HQDLPLSIQEAYQ 142
>gi|303290490|ref|XP_003064532.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454130|gb|EEH51437.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 558
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPL-----KEIY 55
+AE+V +GK + G +T+ EE LFL E L LL PL + +
Sbjct: 172 VAELVRMRGKHFVKFGYAAGSRTFLHAEEALFLVETERLALLAPGATSTPLSVHAVRSLA 231
Query: 56 EKIANEKSGCSW------ELFEVYRHLKSLGYIVGRHGVPW 90
S S + V+ HL +GYIV R PW
Sbjct: 232 MGGGGGGSRFSIPNPLTPSRYLVFAHLARMGYIVRRFNSPW 272
>gi|430812010|emb|CCJ30537.1| unnamed protein product [Pneumocystis jirovecii]
Length = 367
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+A+V +G + + G N + EE ++L E G+L N + + L+ +Y
Sbjct: 82 LAKVERIRGTQFKSLGKFINNSIWLLPEELIYLVERGSLECWWENGIPMSLQAVYSVCLE 141
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGR 85
E G +E ++VY +LK LGY + R
Sbjct: 142 ECGG--FEQYQVYSYLKRLGYYIFR 164
>gi|194747143|ref|XP_001956012.1| GF24994 [Drosophila ananassae]
gi|190623294|gb|EDV38818.1| GF24994 [Drosophila ananassae]
Length = 555
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLC---LPLKEIYEK 57
+AEV+ K GK + G + GK + E LFL E+G L L + C + +++ Y
Sbjct: 84 VAEVLRKDGK-FENFGHSKQGKLFLEYYEALFLLEVGRLQL----EYCGTIVSIEQAYVL 138
Query: 58 IANEKSGCSWELFEVYRHLKSLGYIVGRH 86
+ E + + VY L GYIV RH
Sbjct: 139 LLGESESERFTHYLVYSALSRAGYIVVRH 167
>gi|254569668|ref|XP_002491944.1| Subunit of the tRNA splicing endonuclease, which is composed of
Sen2p, Sen15p, Sen34p, and Sen54p [Komagataella pastoris
GS115]
gi|238031741|emb|CAY69664.1| Subunit of the tRNA splicing endonuclease, which is composed of
Sen2p, Sen15p, Sen34p, and Sen54p [Komagataella pastoris
GS115]
Length = 371
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 27/180 (15%)
Query: 3 EVVEKKGKMWTTTGIVR-NGKTYCSIEETLFLAEIGALYLL--DNNDLCLPLKEIYEKIA 59
++ +GK + G N KT+ + E L+L E G + ++N+ L L+E Y I
Sbjct: 87 HILNAQGKFLDSMGKTDGNHKTWFTKFEALYLIERGTCRITYDEDNNYTLSLEECYTVIL 146
Query: 60 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVM 119
+ + + VY HLK GYIV + I K + R +NI + S+ P
Sbjct: 147 TDDEDI--DKYNVYSHLKRNGYIVLEYASLSIEK--ETRYVNIDKNIHSVYDKPLFKYTF 202
Query: 120 DVEPKEESSLVALFYNIQIN-----EVRPV--------FDVYLPNRKFKKSCPGDPSFLL 166
++ +F N+Q++ +V P F V+ P F+K P P F +
Sbjct: 203 -------TNYSTIFCNLQLDIYNRHKVSPAPTSPFEICFSVWKPQVNFQKKSPPLPDFQI 255
>gi|254577903|ref|XP_002494938.1| ZYRO0A13332p [Zygosaccharomyces rouxii]
gi|238937827|emb|CAR26005.1| ZYRO0A13332p [Zygosaccharomyces rouxii]
Length = 442
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 2 AEVVEKKGKMWTTTG-IVRNGKTYCSIEETLFLAEIGAL---YLLD-----NNDLCLPLK 52
A V+ KG T G + R+G + E ++LAE G++ Y +D N +L L ++
Sbjct: 96 ALVLRPKGNFLHTLGKMHRDGTVWLEFHEFVYLAERGSITPFYKMDGIDWINQELPLTIE 155
Query: 53 EIYEKIANEKSGCSWELFEVYRHLKSLGYIV 83
++Y KS + F V+ HLK LG+IV
Sbjct: 156 DLYMLF---KSQEELDTFFVFEHLKRLGFIV 183
>gi|195014263|ref|XP_001983991.1| GH15259 [Drosophila grimshawi]
gi|193897473|gb|EDV96339.1| GH15259 [Drosophila grimshawi]
Length = 383
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 2 AEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANE 61
AEV+ K GK + + G + GK Y E LFL E+ L L+ ++ + +++ Y + E
Sbjct: 85 AEVLRKDGK-FESFGYSKQGKLYLEYYEALFLLELNRLQ-LEYCEMIVSVEQAYVLLLGE 142
Query: 62 KSGCSWELFEVYRHLKSLGYIVGRH 86
+ + + VY L GYIV +H
Sbjct: 143 AASEKFNNYLVYSTLSRAGYIVVKH 167
>gi|19114394|ref|NP_593482.1| exonuclease II Exo2 [Schizosaccharomyces pombe 972h-]
gi|729456|sp|P40383.1|XRN1_SCHPO RecName: Full=5'-3' exoribonuclease 1; AltName: Full=Exonuclease 2;
AltName: Full=Exonuclease II; Short=Exo II; AltName:
Full=p140
gi|531022|gb|AAB42181.1| deoxyribonuclease [Schizosaccharomyces pombe]
gi|2370486|emb|CAB11514.1| exonuclease II Exo2 [Schizosaccharomyces pombe]
Length = 1328
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 64 GCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKR--HGVMDV 121
G W LF YR +S G+ H P I + KG D+ I TP R +M V
Sbjct: 525 GLQWVLFYYYRGCQSWGWYYNYHFAPKISDVLKGLDVKIDFK----MGTPFRPFEQLMAV 580
Query: 122 EPKEESSLV-ALFYNIQINEVRPVFDVYLPN 151
P +LV F ++ +N P+ D Y N
Sbjct: 581 LPARSQALVPPCFRDLMVNSESPIIDFYPEN 611
>gi|195589768|ref|XP_002084621.1| GD12738 [Drosophila simulans]
gi|194196630|gb|EDX10206.1| GD12738 [Drosophila simulans]
Length = 385
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+AEV K GK + G GK Y E +FL E+G L L+ L + +++ Y +
Sbjct: 88 VAEVKRKDGK-FENFGYSEQGKLYLEYFEAMFLLEVGRLQ-LEYCGLVVSIEQAYVLLLG 145
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVP 89
E + + VY L GYIV +H P
Sbjct: 146 EMESERYTNYLVYSALSRSGYIVVKHVPP 174
>gi|66809041|ref|XP_638243.1| hypothetical protein DDB_G0285335 [Dictyostelium discoideum AX4]
gi|60466691|gb|EAL64742.1| hypothetical protein DDB_G0285335 [Dictyostelium discoideum AX4]
Length = 588
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIG--ALYLLDNNDLCLPLKEIYEKIAN 60
E+ +KGK + + G K Y IEE ++ ++G LY+ N L L ++E + K+
Sbjct: 135 EITLRKGKQFDSVGQQIGSKLYLHIEEAIYFQDLGIVELYI---NQLPLSVQESF-KLFE 190
Query: 61 EKSGCSWELFE--VYRHLKSLGYIVGRH 86
S + +++ Y +LK LGYI+ RH
Sbjct: 191 IPSPSPFPIYKYTAYCYLKKLGYILIRH 218
>gi|50545317|ref|XP_500196.1| YALI0A18293p [Yarrowia lipolytica]
gi|49646061|emb|CAG84128.1| YALI0A18293p [Yarrowia lipolytica CLIB122]
Length = 385
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 2 AEVVEKKGKMWTTTGIV-RNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
A+V +G + T G GK + EET++L E G++ L N + + L+ Y A
Sbjct: 90 AQVDVARGPHFKTIGTSDSQGKVWLYPEETIYLLERGSMELFWPNGVQISLQGAYAVCAG 149
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGR 85
+ + Y HLK G++V R
Sbjct: 150 KMGEDGIDKIHTYSHLKRAGFVVQR 174
>gi|385719264|gb|AFI71930.1| SD01208p1 [Drosophila melanogaster]
Length = 380
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+AEV K GK + G GK Y E +FL E+G L L+ L + +++ Y +
Sbjct: 85 VAEVKRKDGK-FENFGYSEQGKLYLEYYEAMFLLEVGRLQ-LEYCGLVVSIEQAYVLLLG 142
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPK 96
E + + VY L GYIV +H P +IP+
Sbjct: 143 ELESERYTNYLVYSALSRSGYIVVKHVPPQ--EIPQ 176
>gi|328351560|emb|CCA37959.1| Probable tRNA-splicing endonuclease subunit sen54 [Komagataella
pastoris CBS 7435]
Length = 727
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 27/178 (15%)
Query: 3 EVVEKKGKMWTTTGIVR-NGKTYCSIEETLFLAEIGALYLL--DNNDLCLPLKEIYEKIA 59
++ +GK + G N KT+ + E L+L E G + ++N+ L L+E Y I
Sbjct: 87 HILNAQGKFLDSMGKTDGNHKTWFTKFEALYLIERGTCRITYDEDNNYTLSLEECYTVIL 146
Query: 60 NEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVM 119
+ + + VY HLK GYIV + I K + R +NI + S+ P
Sbjct: 147 TDDEDI--DKYNVYSHLKRNGYIVLEYASLSIEK--ETRYVNIDKNIHSVYDKPLFKYTF 202
Query: 120 DVEPKEESSLVALFYNIQIN-----EVRPV--------FDVYLPNRKFKKSCPGDPSF 164
++ +F N+Q++ +V P F V+ P F+K P P F
Sbjct: 203 -------TNYSTIFCNLQLDIYNRHKVSPAPTSPFEICFSVWKPQVNFQKKSPPLPDF 253
>gi|24663212|ref|NP_648559.1| CG5626 [Drosophila melanogaster]
gi|23096160|gb|AAF49941.2| CG5626 [Drosophila melanogaster]
Length = 383
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+AEV K GK + G GK Y E +FL E+G L L+ L + +++ Y +
Sbjct: 88 VAEVKRKDGK-FENFGYSEQGKLYLEYYEAMFLLEVGRLQ-LEYCGLVVSIEQAYVLLLG 145
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVP 89
E + + VY L GYIV +H P
Sbjct: 146 ELESERYTNYLVYSALSRSGYIVVKHVPP 174
>gi|384491032|gb|EIE82228.1| hypothetical protein RO3G_06933 [Rhizopus delemar RA 99-880]
Length = 298
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
++ KG T G+ G + EE FL AL + D D L +++ E I E
Sbjct: 71 KITVNKGTHLHTVGMSHQGHIRLNPEEAAFLVSRNALIVRDE-DRVLTFEDLCEFIV-ED 128
Query: 63 SGCSWELFEVYRHLKSLGYIVGR 85
+ +++ + VY +LK LGYIV R
Sbjct: 129 TWLTFDKYLVYAYLKRLGYIVMR 151
>gi|395826862|ref|XP_003786633.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Otolemur
garnettii]
Length = 521
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEK 62
E+ GK W T G G+ EE L+L E G+L L DL L ++E Y+ + E
Sbjct: 90 ELKSPAGKFWQTMGFSEQGRQRLYPEEALYLLECGSLQLF-YQDLPLSIQEAYQLLLTED 148
Query: 63 S 63
+
Sbjct: 149 T 149
>gi|403280834|ref|XP_003931913.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Saimiri
boliviensis boliviensis]
Length = 528
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 3 EVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYE 56
E+ GK W T G G+ EE L+L E G++ L + DL L ++E Y+
Sbjct: 94 ELKSPAGKFWQTMGFSEQGRQRLHPEEALYLLECGSIQLF-HQDLPLSIQEAYQ 146
>gi|194869756|ref|XP_001972515.1| GG13845 [Drosophila erecta]
gi|190654298|gb|EDV51541.1| GG13845 [Drosophila erecta]
Length = 555
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIAN 60
+AEV+ K GK + G GK Y E +FL E+G L L+ + +++ Y +
Sbjct: 88 VAEVIRKDGK-FENFGYSEQGKLYLEYYEAMFLLEVGRLQ-LEYYGSVVSIEQAYVLLLG 145
Query: 61 EKSGCSWELFEVYRHLKSLGYIVGRHGVP 89
E + + VY L GYIV +H P
Sbjct: 146 ELESERYTNYLVYSALCRSGYIVVKHVPP 174
>gi|196000656|ref|XP_002110196.1| hypothetical protein TRIADDRAFT_53950 [Trichoplax adhaerens]
gi|190588320|gb|EDV28362.1| hypothetical protein TRIADDRAFT_53950 [Trichoplax adhaerens]
Length = 274
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 25/112 (22%)
Query: 70 FEVYRHLKSLGYIVGRHGVPWIVKIPKGR------DINITSD-PVSLQVTPKRHGVMDVE 122
++VY HL LG+IV RH +P K+ K D ++T D P+ L VTP MD E
Sbjct: 116 YQVYCHLLRLGFIVKRH-LPARFKVNKETKSKLQPDHDVTEDYPIPL-VTP-----MDAE 168
Query: 123 PKEES-SLVALFYNIQINEVRPV----------FDVYLPNRKFKKSCPGDPS 163
++ + + + + ++ EV FDVYLPN FKK G P+
Sbjct: 169 TTDKILNKLQVVKSTKMEEVTTKSGSKMEDTIDFDVYLPNANFKKVNFGLPN 220
>gi|126460235|ref|YP_001056513.1| tRNA-splicing endonuclease subunit alpha [Pyrobaculum calidifontis
JCM 11548]
gi|126249956|gb|ABO09047.1| tRNA intron endonuclease [Pyrobaculum calidifontis JCM 11548]
Length = 184
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 25 CSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIV 83
++ E L+LAE G L ++D N + +P +++ E + + +++++Y++ + LGY+V
Sbjct: 51 LALYEALYLAEKGVLTVVDENGVEIPPQQLVE-LGRARIKNFDDIYKIYKYFRDLGYVV 108
>gi|343796730|gb|AEM63745.1| tRNA splicing endonuclease [uncultured euryarchaeote]
Length = 390
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 19/144 (13%)
Query: 29 ETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVG---R 85
ETLFL E G+L + P EI KIA++ + +L+EVY+ +S GY++ +
Sbjct: 178 ETLFLVEFGSLKIE-----GYPFNEIL-KIASKVRPDAQKLYEVYKDWRSKGYVIKSGFK 231
Query: 86 HGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNI--QINEVRP 143
G + V P + I DP + +H V+ V P++ L + + + + V+
Sbjct: 232 FGTHFRVYFPGAKPIK--DDPSWIH---SKH-VLHVFPRDSKLLTSEWARVIRVAHSVKK 285
Query: 144 VFDVYLPNRKFKKSCPGDPSFLLY 167
F + +P + +K D F+LY
Sbjct: 286 TFILGIPGKTRQKKVNMD--FILY 307
>gi|45201301|ref|NP_986871.1| AGR205Cp [Ashbya gossypii ATCC 10895]
gi|50401467|sp|Q74ZJ5.1|SEN54_ASHGO RecName: Full=tRNA-splicing endonuclease subunit SEN54; AltName:
Full=tRNA-intron endonuclease SEN54
gi|44986155|gb|AAS54695.1| AGR205Cp [Ashbya gossypii ATCC 10895]
Length = 455
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Query: 1 MAEVVEKKGKMWTTTGIV-RNGKTYCSIEETLFLAEIGAL--YLL--------DNNDLCL 49
MA + +G T G V ++G+ + + E ++L E G + YL ++ D+ L
Sbjct: 96 MARIPNARGSFTNTMGKVDKHGQCWLQLHEFVYLVERGTVSPYLALTVGDEKSNHEDVLL 155
Query: 50 PLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIV 83
++++Y + S + F VY HLK LG+IV
Sbjct: 156 SVQDVYALFS---STEELDEFLVYAHLKRLGFIV 186
>gi|374110120|gb|AEY99025.1| FAGR205Cp [Ashbya gossypii FDAG1]
Length = 455
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Query: 1 MAEVVEKKGKMWTTTGIV-RNGKTYCSIEETLFLAEIGAL--YLL--------DNNDLCL 49
MA + +G T G V ++G+ + + E ++L E G + YL ++ D+ L
Sbjct: 96 MARIPNARGSFTNTMGKVDKHGQCWLQLHEFVYLVERGTVSPYLALTVGDEKSNHEDVLL 155
Query: 50 PLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIV 83
++++Y + S + F VY HLK LG+IV
Sbjct: 156 SVQDVYALFS---STEELDEFLVYAHLKRLGFIV 186
>gi|190686370|gb|ACE84048.1| hypothetical protein CJA_3034 [Cellvibrio japonicus Ueda107]
Length = 3113
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 92 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 151
VK P DI I+ + V ++TP++H ++D P+ + +V + + DVYL +
Sbjct: 2324 VKNPTDEDIRISREHVEKKITPEQHKILDQNPEHKKQVVQALAEMSARGIN--VDVYLSH 2381
Query: 152 RK 153
K
Sbjct: 2382 YK 2383
>gi|156717656|ref|NP_001096368.1| tRNA splicing endonuclease 54 homolog [Xenopus (Silurana)
tropicalis]
gi|134024004|gb|AAI35898.1| LOC100124961 protein [Xenopus (Silurana) tropicalis]
Length = 229
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 1 MAEVVEKKGKMWTTTGIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEI 54
+ E+ GK W T G GK EE ++L E GA+ L ++ L L +I
Sbjct: 72 LVELTSPAGKFWQTMGFTHQGKQCLLPEEAVYLLECGAVQLFYHDSLLSVLDQI 125
>gi|315230684|ref|YP_004071120.1| tRNA-intron endonuclease [Thermococcus barophilus MP]
gi|315183712|gb|ADT83897.1| tRNA-intron endonuclease [Thermococcus barophilus MP]
Length = 171
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 16 GIVRNGKTYCSIEETLFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWEL-FEVYR 74
G V NGK + S+ E +L + G + + D N L LKE+++ K ++L F VY+
Sbjct: 32 GEVVNGKLFLSLIEAAYLMDRGKIKVFDGNK-ELSLKELFD--LGRKKDEQFDLKFLVYK 88
Query: 75 HLKSLGYIV 83
L+ GY+V
Sbjct: 89 DLRDRGYVV 97
>gi|343426140|emb|CBQ69671.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 725
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 31/123 (25%)
Query: 2 AEVVEKKGKMWTTTGIVR--------NGKTYCSI------EETLFLAEIGALYLLDN--- 44
A +++ +GK++ T G++R GK EE LFLAE G+L + D
Sbjct: 149 ARLLDVQGKIFETVGVIRREQVHDTKTGKMVTKAWNELLPEEALFLAERGSLQIYDQCSD 208
Query: 45 -----NDLC-LPLKEIYEKIANEKSGCS--------WELFEVYRHLKSLGYIVGRHGVPW 90
DL + L++ + ++ S S E + +Y +LK LGY+V R +
Sbjct: 209 DASTEQDLAPMSLQQAFAELMKPPSPDSPVQDEPLTREAYLIYAYLKRLGYVVQRASLVD 268
Query: 91 IVK 93
+V+
Sbjct: 269 VVR 271
>gi|430814593|emb|CCJ28201.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1318
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 52 KEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQV 111
K++ E N G W LF YR + S + H P + I KG N+ S +
Sbjct: 494 KKLKEMAENYIEGLQWVLFYYYRGVSSWSWFYKYHYSPKVSDIKKGFAANL-SFTLGTPF 552
Query: 112 TPKRHGVMDVEPKEESSLVAL-FYNIQINEVRPVFDVY 148
P +M V P+ LV F ++ +NE P+ D Y
Sbjct: 553 KPFEQ-LMAVLPERSKKLVPKPFADLMVNETSPIRDFY 589
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.140 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,887,503,605
Number of Sequences: 23463169
Number of extensions: 118136874
Number of successful extensions: 218017
Number of sequences better than 100.0: 157
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 217820
Number of HSP's gapped (non-prelim): 203
length of query: 173
length of database: 8,064,228,071
effective HSP length: 132
effective length of query: 41
effective length of database: 9,262,057,059
effective search space: 379744339419
effective search space used: 379744339419
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)