Query 030705
Match_columns 173
No_of_seqs 108 out of 1040
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 04:45:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030705.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030705hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1olm_A SEC14-like protein 2; l 95.9 0.11 3.7E-06 42.3 11.3 90 23-123 281-385 (403)
2 2dj4_A Filamin-B; beta-sandwic 92.2 1.1 3.8E-05 29.4 8.1 85 26-115 9-99 (108)
3 3rgh_A Filamin-A; cell adhesio 91.8 0.6 2E-05 30.3 6.3 73 27-106 7-85 (100)
4 1v05_A Filamin C; actin-bindin 91.7 0.45 1.6E-05 30.5 5.7 76 26-106 4-83 (96)
5 2d7n_A Filamin-C; beta-sandwic 91.2 2 6.7E-05 27.6 8.7 55 62-116 21-79 (93)
6 2bp3_A Filamin A; structural p 90.9 1.1 3.9E-05 28.6 7.0 65 46-116 25-92 (97)
7 2ee9_A Filamin-B; beta-sandwic 90.8 0.96 3.3E-05 29.2 6.5 52 62-113 29-84 (95)
8 4dzg_A PLIG; lysozyme inhibito 90.2 0.36 1.2E-05 32.4 4.1 71 25-106 23-96 (114)
9 2w0p_A Filamin-A; alternative 90.2 2.4 8.1E-05 26.9 8.0 43 63-106 34-78 (94)
10 2d7p_A Filamin-C; beta-sandwic 89.8 2.4 8.3E-05 28.0 8.1 63 46-114 30-96 (112)
11 2nqc_A Filamin-C; immunoglobul 89.7 3.7 0.00013 28.3 9.8 66 46-116 64-131 (138)
12 2d7m_A Filamin-C; beta-sandwic 89.6 3.2 0.00011 27.4 8.7 85 27-116 10-101 (115)
13 2dic_A Filamin-B; beta-sandwic 88.8 3.4 0.00012 26.8 8.2 54 47-106 31-86 (105)
14 2ee6_A Filamin-B; beta-sandwic 88.8 3.4 0.00012 26.7 8.1 64 46-115 30-96 (105)
15 2dlg_A Filamin-B; beta-sandwic 88.5 1.6 5.4E-05 28.5 6.3 53 62-114 30-86 (102)
16 3cnk_A Filamin-A; FLNA24, X-RA 88.5 3.2 0.00011 26.0 8.4 45 62-106 29-76 (89)
17 2e9j_A Filamin-B; beta-sandwic 88.5 1.1 3.7E-05 30.0 5.5 85 27-116 20-111 (119)
18 4b7l_A Filamin-B; structural p 88.4 2.2 7.6E-05 34.0 8.2 100 2-106 227-335 (347)
19 3d33_A Domain of unknown funct 87.2 2.6 9E-05 27.9 6.7 56 41-106 37-97 (108)
20 2dmb_A Filamin-B; beta-sandwic 87.2 5.1 0.00017 26.9 9.5 65 47-116 32-100 (124)
21 2p9r_A Alpha-2-M, alpha-2-macr 87.1 4.2 0.00015 25.9 10.6 64 40-106 15-86 (102)
22 2dmc_A Filamin-B; beta-sandwic 86.7 1.4 4.8E-05 29.4 5.3 54 62-115 44-101 (116)
23 3osv_A Flagellar basal-BODY RO 86.7 3.5 0.00012 28.3 7.5 57 42-106 24-91 (138)
24 4g9s_B Inhibitor of G-type lys 86.6 3.7 0.00013 27.0 7.3 73 22-106 18-93 (111)
25 2eea_A Filamin-B; beta-sandwic 85.5 5.9 0.0002 26.0 9.5 65 46-116 40-107 (115)
26 3c12_A FLGD, flagellar protein 84.4 6.8 0.00023 26.7 8.1 54 43-105 28-92 (138)
27 2eec_A Filamin-B; beta-sandwic 84.1 7.6 0.00026 26.1 9.0 65 46-116 40-107 (125)
28 3c75_A Amicyanin; copper prote 83.2 3.7 0.00013 27.8 6.2 18 85-102 102-120 (132)
29 2k9u_A Gamma filamin; cytoskel 82.6 8.3 0.00028 25.5 10.2 65 45-115 36-103 (119)
30 2dia_A Filamin-B; beta-sandwic 82.4 6.7 0.00023 25.6 7.1 55 62-116 41-99 (113)
31 2k7p_A Filamin-A; IG-like, ABP 81.8 12 0.00041 26.8 9.1 55 46-106 116-172 (188)
32 2di9_A Filamin-B; beta-sandwic 80.6 11 0.00037 25.4 10.2 65 46-116 50-117 (131)
33 2di8_A Filamin-B; beta-sandwic 78.7 11 0.00038 24.6 9.1 64 47-116 31-97 (111)
34 4fxk_A Complement C4 beta chai 78.3 23 0.00078 30.1 10.9 64 40-106 133-202 (656)
35 3irp_X URO-adherence factor A; 77.3 3.5 0.00012 33.9 5.2 43 63-105 330-372 (429)
36 2d7o_A Filamin-C; beta-sandwic 77.0 6.6 0.00023 25.7 5.7 64 47-116 31-97 (111)
37 3isy_A Bsupi, intracellular pr 75.9 6.2 0.00021 26.6 5.3 43 40-82 16-61 (120)
38 2k7q_A Filamin-A; IG-like, ABP 73.2 17 0.00058 25.9 7.6 54 47-106 117-172 (191)
39 3sd2_A Putative member of DUF3 73.1 10 0.00035 24.7 5.6 67 26-106 22-91 (101)
40 2k8e_A UPF0339 protein YEGP; p 71.4 14 0.00049 25.1 6.3 64 37-107 10-91 (130)
41 1qfh_A Protein (gelation facto 70.9 27 0.00092 25.2 10.7 45 62-107 134-181 (212)
42 1wlh_A Gelation factor; ABP-12 70.6 12 0.00042 28.8 6.6 44 63-107 234-280 (311)
43 3jqw_A COLH protein, collagena 68.6 23 0.0008 23.6 11.7 71 28-107 35-106 (121)
44 3hrz_A Cobra venom factor; ser 66.9 30 0.001 29.7 8.8 47 60-106 134-183 (627)
45 2dib_A Filamin-B; beta-sandwic 66.4 16 0.00053 24.3 5.7 86 27-116 20-114 (128)
46 2k7p_A Filamin-A; IG-like, ABP 66.2 15 0.00052 26.2 6.0 44 63-106 34-80 (188)
47 2hr0_A Complement C3 beta chai 66.0 62 0.0021 27.6 11.9 62 41-105 120-189 (645)
48 3e8v_A Possible transglutamina 64.9 23 0.00077 22.1 5.9 41 62-102 17-67 (82)
49 2k7q_A Filamin-A; IG-like, ABP 63.7 16 0.00054 26.1 5.7 45 62-106 30-77 (191)
50 2j3s_A Filamin-A; cytoskeleton 63.0 37 0.0012 25.9 8.0 54 47-106 217-272 (288)
51 3cu7_A Complement C5; Mg domai 60.3 30 0.001 33.3 8.2 48 59-106 153-207 (1676)
52 2xwx_A GBPA, glcnac-binding pr 60.0 68 0.0023 26.0 10.2 59 42-107 311-375 (391)
53 2r5o_A Putative ATP binding co 57.5 36 0.0012 24.1 6.6 39 38-80 66-104 (188)
54 2ds4_A Tripartite motif protei 57.3 34 0.0012 21.8 9.5 55 62-116 48-108 (113)
55 4hci_A Cupredoxin 1; structura 56.5 17 0.0006 22.8 4.3 18 84-101 67-85 (100)
56 3fn2_A Putative sensor histidi 51.1 19 0.00065 23.5 3.7 39 66-104 51-92 (106)
57 3prx_B Cobra venom factor; imm 46.3 1E+02 0.0035 29.8 9.3 46 60-105 156-204 (1642)
58 2b39_A C3; thioester, immune d 45.2 89 0.003 30.1 8.8 46 60-105 157-210 (1661)
59 2x5p_A FBA2, fibronectin bindi 43.4 34 0.0012 22.8 4.3 55 64-120 44-98 (121)
60 1qfh_A Protein (gelation facto 41.3 95 0.0033 22.2 7.7 45 62-106 43-90 (212)
61 2pn5_A TEP1R, thioester-contai 41.2 2.3E+02 0.0077 26.5 11.5 43 63-105 135-184 (1325)
62 2akf_A Coronin-1A; coiled coil 41.0 33 0.0011 16.8 4.3 23 138-160 2-24 (32)
63 2j3s_A Filamin-A; cytoskeleton 41.0 1.1E+02 0.0039 23.0 9.0 54 47-106 26-81 (288)
64 1kd8_B GABH BLL, GCN4 acid bas 39.3 41 0.0014 17.4 4.2 28 136-163 2-29 (36)
65 1uo4_A General control protein 37.0 44 0.0015 17.0 4.3 27 136-162 2-28 (34)
66 1jcd_A Major outer membrane li 36.9 57 0.002 18.4 3.9 27 136-162 5-31 (52)
67 3hfe_A Potassium voltage-gated 36.1 36 0.0012 17.0 2.5 18 137-154 12-29 (31)
68 1dip_A Delta-sleep-inducing pe 35.2 76 0.0026 19.3 4.7 33 131-163 11-43 (78)
69 2pnv_A Small conductance calci 35.1 56 0.0019 17.7 3.5 21 138-158 19-39 (43)
70 3c3f_A Alpha/beta peptide with 34.9 48 0.0016 16.9 4.2 27 136-162 2-28 (34)
71 3tu6_A Pseudoazurin (blue copp 34.5 92 0.0032 20.7 5.4 19 84-102 62-81 (127)
72 3pay_A Putative adhesin; struc 33.5 24 0.00082 27.6 2.5 72 34-106 6-86 (314)
73 3gf8_A Putative polysaccharide 31.6 29 0.00099 26.8 2.7 44 63-106 37-86 (296)
74 3erx_A Pseudoazurin; copper pr 31.5 1.1E+02 0.0038 20.1 6.5 19 84-102 60-79 (123)
75 2djm_A Glucoamylase A; beta sa 30.2 1.1E+02 0.0039 19.7 5.1 73 27-105 4-87 (106)
76 4acq_A Alpha-2-macroglobulin; 30.1 3.7E+02 0.013 25.6 11.6 46 60-105 134-187 (1451)
77 1kd8_A GABH AIV, GCN4 acid bas 29.0 65 0.0022 16.6 4.4 27 136-162 2-28 (36)
78 3l4f_A RHO guanine nucleotide 28.8 86 0.0029 18.3 3.7 23 140-162 5-27 (61)
79 2wq1_A General control protein 28.5 64 0.0022 16.3 4.0 25 137-161 2-26 (33)
80 2dgc_A Protein (GCN4); basic d 27.6 52 0.0018 19.2 2.7 31 133-163 28-58 (63)
81 2r2v_A GCN4 leucine zipper; co 27.5 68 0.0023 16.3 4.2 25 137-161 3-27 (34)
82 2yrp_A Nuclear factor of activ 27.4 1.1E+02 0.0037 20.2 4.6 54 63-122 38-94 (114)
83 2bni_A General control protein 26.0 73 0.0025 16.2 4.3 27 136-162 2-28 (34)
84 2ovc_A Potassium voltage-gated 25.8 64 0.0022 16.4 2.5 18 137-154 12-29 (33)
85 3a0c_A Mannose/sialic acid-bin 25.6 1E+02 0.0036 19.5 4.3 30 68-97 64-94 (110)
86 2q0z_X Protein Pro2281; SEC63, 25.6 2.3E+02 0.008 21.9 8.5 60 62-122 264-330 (339)
87 1gd2_E Transcription factor PA 23.5 52 0.0018 19.7 2.2 37 132-168 26-62 (70)
88 1dh3_A Transcription factor CR 23.1 56 0.0019 18.4 2.2 30 132-161 19-48 (55)
89 2lif_A Core protein P21; signa 28.7 18 0.0006 17.6 0.0 17 6-22 8-24 (27)
90 1wlh_A Gelation factor; ABP-12 22.6 2.5E+02 0.0086 21.2 8.4 45 62-107 42-88 (311)
91 3m48_A General control protein 22.5 87 0.003 15.8 4.3 26 137-162 2-27 (33)
92 2er8_A Regulatory protein Leu3 22.4 29 0.00099 20.3 0.9 23 134-156 48-70 (72)
93 1nqj_A Class 1 collagenase; be 22.3 1.7E+02 0.006 19.2 8.0 65 29-105 38-107 (119)
94 2cal_A Rusticyanin; iron respi 22.3 76 0.0026 21.7 3.2 17 85-102 121-138 (154)
95 1hbw_A Regulatory protein GAL4 22.2 49 0.0017 18.9 1.8 18 134-151 2-19 (57)
96 2l3b_A Conserved protein found 21.6 1.5E+02 0.005 20.0 4.3 10 111-120 105-114 (130)
97 1cuo_A Protein (azurin ISO-2); 21.6 47 0.0016 22.2 2.0 23 84-106 91-117 (129)
98 1f7l_A Holo-(acyl carrier prot 21.5 1.6E+02 0.0056 18.7 4.8 35 70-104 81-115 (121)
99 1yhn_B RILP, RAB interacting l 21.1 1.3E+02 0.0046 17.5 4.7 31 135-165 3-33 (65)
100 2k49_A UPF0339 protein SO_3888 20.6 1.9E+02 0.0065 19.0 6.4 53 46-105 3-73 (118)
101 3kpt_A Collagen adhesion prote 20.3 99 0.0034 24.3 3.9 38 64-101 268-311 (355)
No 1
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=95.86 E-value=0.11 Score=42.29 Aligned_cols=90 Identities=9% Similarity=0.064 Sum_probs=60.5
Q ss_pred EEEEeCCccceeeeecc-CCcEEEEEEEEEcCCCCCCCCCCceEEEEEe--C---CC---CC--eEEee--ecc--ccce
Q 030705 23 RFEIQSAHTKCIAEDIK-SNSMTVGKYNVVNPNDGHPLPESHKLTVRVT--S---AY---GN--SYHYA--DRV--DSGQ 87 (173)
Q Consensus 23 ~f~l~~~~~~Cf~e~~~-~~~~v~~~y~v~~~~~~~~~~~~~~v~v~I~--d---p~---g~--~l~~~--~~~--~~g~ 87 (173)
.+.|++|+...+--.+. +|..+...|.+.+. +|.+.|+ . +. |. .+... ... .-..
T Consensus 281 ~~~V~~g~~~~v~~~v~~~g~~l~W~f~~~~~----------DI~F~v~~~~~~~~~~~~~~~~~v~p~~r~~~~~~~~~ 350 (403)
T 1olm_A 281 SVQISRGSSHQVEYEILFPGCVLRWQFMSDGA----------DVGFGIFLKTKMGERQRAGEMTEVLPNQRYNSHLVPED 350 (403)
T ss_dssp EEEECTTCEEEEEEEECSTTCEEEEEEEESSS----------CEEEEEEEC----CCCCGGGSEEEEEEEEECTTTSCEE
T ss_pred EEEEcCCCEEEEEEEEcCCCCEEEEEEEecCC----------cEEEEEEEecccccccCCCcceEEeeeeeecCcccccc
Confidence 48899999998888887 68899999988433 4555554 1 11 21 23211 111 1123
Q ss_pred EEEEeeccCceeEEEEecCCCCCceEEEEEEEeecc
Q 030705 88 FAFTAAEAGDYMACFWAVDHSPQTTVTIDFDWRTGV 123 (173)
Q Consensus 88 f~f~~~~~G~y~iCf~n~~~~~~~~~~V~f~~~~g~ 123 (173)
=+|+....|.|.++|.|+.|. ..+++|.+.+.+-.
T Consensus 351 G~~~~~~~G~y~l~fdNs~S~-~~~k~l~y~v~v~~ 385 (403)
T 1olm_A 351 GTLTCSDPGIYVLRFDNTYSF-IHAKKVNFTVEVLL 385 (403)
T ss_dssp EEEECCSCEEEEEEEECTTCC-CCSEEEEEEEEEEC
T ss_pred CEEEcCCCeEEEEEEeccccc-eeceEEEEEEEEeC
Confidence 457799999999999999875 56788888887644
No 2
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=92.16 E-value=1.1 Score=29.35 Aligned_cols=85 Identities=19% Similarity=0.302 Sum_probs=49.5
Q ss_pred EeCCccceeeeeccCCc--EEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEee-eccccc--eEEEEeeccCceeE
Q 030705 26 IQSAHTKCIAEDIKSNS--MTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYA-DRVDSG--QFAFTAAEAGDYMA 100 (173)
Q Consensus 26 l~~~~~~Cf~e~~~~~~--~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~-~~~~~g--~f~f~~~~~G~y~i 100 (173)
++|...+|...-+..+. ....+|.|...+++ +..+.+.|.+|.|..+.-. .+...| ..+|++...|.|.+
T Consensus 9 ~d~sk~~v~G~Gl~~~v~~~~~~~F~V~~~~aG-----~~~l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i 83 (108)
T 2dj4_A 9 VDPSKVKIAGPGLGSGVRARVLQSFTVDSSKAG-----LAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMV 83 (108)
T ss_dssp CCTTSCEEESTTTSSCCBTTSCEEEEEECTTTC-----SCCEEEEEECSSSCEECCCCEECSSSEEEEEECCSSCEEEEE
T ss_pred cccceeEEECCCcCcCccCCccEEEEEEECCCC-----CceEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCeeEEE
Confidence 45556666654444321 12235666654432 4578999999999654321 222334 46678888899999
Q ss_pred EEEecCCC-CCceEEE
Q 030705 101 CFWAVDHS-PQTTVTI 115 (173)
Q Consensus 101 Cf~n~~~~-~~~~~~V 115 (173)
.+.-.... .+.+..|
T Consensus 84 ~V~~~g~~V~gSPF~v 99 (108)
T 2dj4_A 84 SVKYADEEIPRSPFKV 99 (108)
T ss_dssp EEEESSSBCTTCSEEE
T ss_pred EEEECCEECCCCCEEE
Confidence 88866543 3444433
No 3
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=91.79 E-value=0.6 Score=30.30 Aligned_cols=73 Identities=18% Similarity=0.323 Sum_probs=42.1
Q ss_pred eCCccceeeeeccC---CcEEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEee-eccccc--eEEEEeeccCceeE
Q 030705 27 QSAHTKCIAEDIKS---NSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYA-DRVDSG--QFAFTAAEAGDYMA 100 (173)
Q Consensus 27 ~~~~~~Cf~e~~~~---~~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~-~~~~~g--~f~f~~~~~G~y~i 100 (173)
+|.+.+|...-+.. +.. .+|.|...+++ ...+.+.|.+|.|..+.-+ .+...| ..+|+....|.|.+
T Consensus 7 d~skv~~~GpGL~~~~vg~~--~~F~V~~~~aG-----~~~l~v~i~~~~g~~~~~~v~d~~dGty~V~Y~p~~~G~y~i 79 (100)
T 3rgh_A 7 DASKVKCSGPGLERATAGEV--GQFQVDCSSAG-----SAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTV 79 (100)
T ss_dssp CGGGCEEESGGGTEEETTSC--EEEEEECTTSC-----SCCEEEEEECTTSCBCEEEEEECSSSEEEEEEECCSSEEEEE
T ss_pred ccccCEEECCCcCCeEcCCc--EEEEEEECCCC-----CceEEEEEECCCCCEeEEEEEeCCCCEEEEEEEeCCCeeEEE
Confidence 44455555444432 233 24556655433 4578999999998644321 222334 46777888888888
Q ss_pred EEEecC
Q 030705 101 CFWAVD 106 (173)
Q Consensus 101 Cf~n~~ 106 (173)
.+.-..
T Consensus 80 ~V~~~g 85 (100)
T 3rgh_A 80 TIKYGG 85 (100)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 776543
No 4
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=91.74 E-value=0.45 Score=30.50 Aligned_cols=76 Identities=14% Similarity=0.203 Sum_probs=42.6
Q ss_pred EeCCccceeeeeccCC-cEEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEE-eeeccccc--eEEEEeeccCceeEE
Q 030705 26 IQSAHTKCIAEDIKSN-SMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYH-YADRVDSG--QFAFTAAEAGDYMAC 101 (173)
Q Consensus 26 l~~~~~~Cf~e~~~~~-~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~-~~~~~~~g--~f~f~~~~~G~y~iC 101 (173)
++|...+|...-+... .....+|.|...+++ +..+.+.|.+|.|..+. .-.+...| ..+|++...|.|.+.
T Consensus 4 ~d~~k~~~~G~Gl~~~~~g~~~~F~v~~~~aG-----~~~l~v~v~~p~~~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~ 78 (96)
T 1v05_A 4 SDASKVVTRGPGLSQAFVGQKNSFTVDCSKAG-----TNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILI 78 (96)
T ss_dssp BCGGGCEEESGGGTBCCTTSCEEEEEECTTSB-----SCCEEEEEECSSSCCSEEEEEECSTTEEEEEEECSSCEEEEEE
T ss_pred CCchheEEECCCcCCEEcCCCEEEEEEEeCCC-----CCcEEEEEECCCCCeeEEEEEeCCCCEEEEEEEeCCCEEEEEE
Confidence 3444555554444432 112234556544432 45788899999985321 11222334 466788888888888
Q ss_pred EEecC
Q 030705 102 FWAVD 106 (173)
Q Consensus 102 f~n~~ 106 (173)
+.-..
T Consensus 79 V~~~g 83 (96)
T 1v05_A 79 VKWGD 83 (96)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 87554
No 5
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=91.18 E-value=2 Score=27.57 Aligned_cols=55 Identities=13% Similarity=0.056 Sum_probs=37.2
Q ss_pred CceEEEEEeCCCCCeEEe-eecccc--ceEEEEeeccCceeEEEEecCCC-CCceEEEE
Q 030705 62 SHKLTVRVTSAYGNSYHY-ADRVDS--GQFAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (173)
Q Consensus 62 ~~~v~v~I~dp~g~~l~~-~~~~~~--g~f~f~~~~~G~y~iCf~n~~~~-~~~~~~V~ 116 (173)
...+.+.|.+|+|..+.- -.+... -..+|++.+.|.|.+++.-.... .+.+..|.
T Consensus 21 ~~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~g~~I~GSPF~v~ 79 (93)
T 2d7n_A 21 KGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFY 79 (93)
T ss_dssp SSCEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEEEEEEEEESSSCCTTCSEEEE
T ss_pred CCCEEEEEECCCCCccceEEEECCCCEEEEEEEccCCEEEEEEEEECCEeCCCCCeEEE
Confidence 457899999999985421 112223 46788999999999999876654 34554433
No 6
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=90.88 E-value=1.1 Score=28.60 Aligned_cols=65 Identities=14% Similarity=0.256 Sum_probs=39.9
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeeccccc--eEEEEeeccCceeEEEEecCCC-CCceEEEE
Q 030705 46 GKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (173)
Q Consensus 46 ~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~~~-~~~~~~V~ 116 (173)
.+|.|...+++ ...+.+.|.+|.+..+.-. +...| ..+|++...|.|.+.+.-.... .+.+..|.
T Consensus 25 ~~F~v~t~dag-----~~~l~v~v~~p~~~~~~v~-d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~ 92 (97)
T 2bp3_A 25 ATFTVNTKDAG-----EGGLSLAIEGPSKAEISCT-DNQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTAR 92 (97)
T ss_dssp EEEEEECTTCC-----SEEEEEEEEESSCCEEEEE-ECSSSEEEEEEECSSCEEEEEEEEETTEECTTCSEEEE
T ss_pred EEEEEEECCCC-----CCcEEEEEECCCCCEEEEE-ECCCCEEEEEEEeCCCCcEEEEEEECCEECCCcCEEEE
Confidence 34556555432 4578889999988654322 22334 5778888899999988765432 24444433
No 7
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.81 E-value=0.96 Score=29.25 Aligned_cols=52 Identities=12% Similarity=0.089 Sum_probs=35.5
Q ss_pred CceEEEEEeCCCCCeEEee-ecccc--ceEEEEeeccCceeEEEEecCCC-CCceE
Q 030705 62 SHKLTVRVTSAYGNSYHYA-DRVDS--GQFAFTAAEAGDYMACFWAVDHS-PQTTV 113 (173)
Q Consensus 62 ~~~v~v~I~dp~g~~l~~~-~~~~~--g~f~f~~~~~G~y~iCf~n~~~~-~~~~~ 113 (173)
...+.+.|.+|+|..+--. .+... -..+|++.+.|.|.+++.-.... .+.+.
T Consensus 29 ~~~ltv~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~G~~I~GSPF 84 (95)
T 2ee9_A 29 KGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPL 84 (95)
T ss_dssp TTSEEEEEECTTSCEECCEEEECSSSCEEEECCCCSSEEEEEEEEESSCBCTTCSE
T ss_pred CCCEEEEEECCCCCccccEEEeCCCCeEEEEEEecCCEeEEEEEEECCEECCCCCe
Confidence 4589999999999754211 12223 45778889999999999876543 34453
No 8
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=90.19 E-value=0.36 Score=32.40 Aligned_cols=71 Identities=10% Similarity=0.054 Sum_probs=49.8
Q ss_pred EEeCCccceeeeeccCCcEEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCe---EEeeeccccceEEEEeeccCceeEE
Q 030705 25 EIQSAHTKCIAEDIKSNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNS---YHYADRVDSGQFAFTAAEAGDYMAC 101 (173)
Q Consensus 25 ~l~~~~~~Cf~e~~~~~~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~---l~~~~~~~~g~f~f~~~~~G~y~iC 101 (173)
.|.+++...+.-.+.++..+.+.. +. +..+.+.|.+|.|+. ++..+....+.|+-+...+|.|.+=
T Consensus 23 ~I~g~~~~~Y~~~a~aGQ~l~V~l---s~--------~~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~ 91 (114)
T 4dzg_A 23 SFTGYDTIHYTLVAXAGQTMTVXI---GG--------SSNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQ 91 (114)
T ss_dssp CCBTTCCEEEECCC-CCCEEEC-C---EE--------STTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEE
T ss_pred EecCCCceEEEEEecCCCEEEEEe---CC--------CCcEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEE
Confidence 567778888888899998887774 22 235778899999873 3433323345888899999999998
Q ss_pred EEecC
Q 030705 102 FWAVD 106 (173)
Q Consensus 102 f~n~~ 106 (173)
+....
T Consensus 92 V~~~r 96 (114)
T 4dzg_A 92 VYQMR 96 (114)
T ss_dssp EECCH
T ss_pred EEecc
Confidence 88763
No 9
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=90.16 E-value=2.4 Score=26.92 Aligned_cols=43 Identities=19% Similarity=0.292 Sum_probs=29.7
Q ss_pred ceEEEEEeCCCCCeEEeeeccccc--eEEEEeeccCceeEEEEecC
Q 030705 63 HKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (173)
Q Consensus 63 ~~v~v~I~dp~g~~l~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~ 106 (173)
..+.+.|.+|.+..+.-. +...| ..+|++...|.|.+.+.-..
T Consensus 34 ~~~~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~g 78 (94)
T 2w0p_A 34 GGLAIAVEGPSKAEISFE-DRKDGSCGVAYVVQEPGDYEVSVKFNE 78 (94)
T ss_dssp CCEEEEEEESSCCEEEEE-ECTTSCEEEEEECSSCEEEEEEEEETT
T ss_pred CcEEEEEECCCCCeEEEE-ECCCCEEEEEEEECCCceEEEEEEECC
Confidence 467888889988654322 22334 56788888899999888654
No 10
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=89.85 E-value=2.4 Score=28.01 Aligned_cols=63 Identities=14% Similarity=0.121 Sum_probs=40.5
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEee-eccc--cceEEEEeeccCceeEEEEecCCC-CCceEE
Q 030705 46 GKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYA-DRVD--SGQFAFTAAEAGDYMACFWAVDHS-PQTTVT 114 (173)
Q Consensus 46 ~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~-~~~~--~g~f~f~~~~~G~y~iCf~n~~~~-~~~~~~ 114 (173)
.+|.|...++ +-.+.+.|.+|.|..+--. .+.. .-..+|++.+.|.|.+.+.-.... .+.+..
T Consensus 30 ~~F~V~~~~a------~g~l~v~V~~P~g~~~~~~v~d~~~gty~v~ytP~~~G~h~v~V~~~g~~I~GSPF~ 96 (112)
T 2d7p_A 30 ASFAVQLNGA------RGVIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFK 96 (112)
T ss_dssp EEEEEECTTC------CSCEEEEEECSSSCBCCCEECSCBTTEEEEEECCSSCEEEEEEEEESSCBCTTCSEE
T ss_pred EEEEEEeCCC------CCCEEEEEECCCCCeeeeEEEeCCCCeEEEEEEcCCCEeEEEEEEECCeEcCCCCEE
Confidence 3555665442 3478999999999754221 1222 346788999999999988866543 345533
No 11
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=89.68 E-value=3.7 Score=28.30 Aligned_cols=66 Identities=14% Similarity=0.197 Sum_probs=41.0
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeeccccceEEEEeeccCceeEEEEecC-CC-CCceEEEE
Q 030705 46 GKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAVD-HS-PQTTVTID 116 (173)
Q Consensus 46 ~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~~g~f~f~~~~~G~y~iCf~n~~-~~-~~~~~~V~ 116 (173)
.+|.|...+++ ...+.+.|.+|++..+--.+....=..+|++...|.|.+.+.-.. .. .+.+..|.
T Consensus 64 ~~F~V~t~daG-----~g~l~v~I~gPs~~~~~~~d~~dGy~V~YtP~~~G~y~I~Vk~~g~~hI~GSPF~v~ 131 (138)
T 2nqc_A 64 SEFIVNTLNAG-----SGALSVTIDGPSKVQLDCRECPEGHVVTYTPMAPGNYLIAIKYGGPQHIVGSPFKAK 131 (138)
T ss_dssp EEEEEECTTSC-----SCCEEEEEESSSCCEEEEEEETTEEEEEEECCSCEEEEEEEEESSSCBCTTCSEEEE
T ss_pred eEEEEEEcCCC-----CCcEEEEEECCCCCeeeEEECCCcEEEEEEcCCCEEEEEEEEECCcccCCCCCeEEE
Confidence 45667655432 457899999999875432222111467788888999998777655 32 34454443
No 12
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=89.57 E-value=3.2 Score=27.39 Aligned_cols=85 Identities=12% Similarity=0.214 Sum_probs=48.6
Q ss_pred eCCccceeeeeccCCc---EEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEe-eeccccc--eEEEEeeccCceeE
Q 030705 27 QSAHTKCIAEDIKSNS---MTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHY-ADRVDSG--QFAFTAAEAGDYMA 100 (173)
Q Consensus 27 ~~~~~~Cf~e~~~~~~---~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~-~~~~~~g--~f~f~~~~~G~y~i 100 (173)
+|..-+|...-+.... ....+|.|...+++ ...+.+.|.+|.|..+.- -.+...| ..+|++...|.|.+
T Consensus 10 d~~k~~~~G~Gl~~~~v~~~~~~~F~V~~~daG-----~~~l~V~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i 84 (115)
T 2d7m_A 10 DASKVRASGPGLNASGIPASLPVEFTIDARDAG-----EGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTI 84 (115)
T ss_dssp CGGGEEEESSTTCSSCEESSSCEEEEEEESSSC-----SSCEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEE
T ss_pred CcceeEEECCCccccccccCCcEEEEEEECCCC-----CCEEEEEEECCCCCeeeeEEEECCCCEEEEEEEeCCCceEEE
Confidence 4444455544443311 11235556544432 457899999999874422 1222344 56688889999999
Q ss_pred EEEecCCC-CCceEEEE
Q 030705 101 CFWAVDHS-PQTTVTID 116 (173)
Q Consensus 101 Cf~n~~~~-~~~~~~V~ 116 (173)
.+.-.... ...+..|.
T Consensus 85 ~V~~~g~~I~gSPF~v~ 101 (115)
T 2d7m_A 85 TIKYGGDEIPYSPFRIH 101 (115)
T ss_dssp EEEESSCBCTTCSEEEE
T ss_pred EEEECCEECCCCCEEEE
Confidence 88876543 34554443
No 13
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=88.84 E-value=3.4 Score=26.80 Aligned_cols=54 Identities=19% Similarity=0.233 Sum_probs=35.3
Q ss_pred EEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeeccccc--eEEEEeeccCceeEEEEecC
Q 030705 47 KYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (173)
Q Consensus 47 ~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~ 106 (173)
+|.+...+++ ...+.+.|.+|.+..+.-.+ ...| ..+|+....|.|.+.+.-..
T Consensus 31 ~F~v~t~dag-----~g~l~v~v~gp~~~~~~v~d-~~dGty~v~Y~p~~~G~y~I~V~~~g 86 (105)
T 2dic_A 31 VFTVVTRGAG-----IGGLGITVEGPSESKINCRD-NKDGSCSAEYIPFAPGDYDVNITYGG 86 (105)
T ss_dssp EEEEECTTTC-----SSCEEEEEESSSCCCCEEEE-CSSSCEEEEECCSSCEEEEEEEEETT
T ss_pred EEEEEEccCC-----CCceEEEEECCCCCeEEEEE-CCCCeEEEEEEeCCCeEEEEEEEECC
Confidence 4556554432 34688889999876443222 2334 56788888999999888654
No 14
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.77 E-value=3.4 Score=26.75 Aligned_cols=64 Identities=17% Similarity=0.330 Sum_probs=40.8
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeeccccc--eEEEEeeccCceeEEEEecCCC-CCceEEE
Q 030705 46 GKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTI 115 (173)
Q Consensus 46 ~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~~~-~~~~~~V 115 (173)
.+|.|...+++ ...+.+.|.+|.+..+ .-.+...| ..+|++...|.|.+++.-.... .+.+..|
T Consensus 30 ~~F~v~t~dag-----~~~l~v~v~~p~~~~v-~v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v 96 (105)
T 2ee6_A 30 AEFSIWTREAG-----AGGLSIAVEGPSKAEI-TFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLV 96 (105)
T ss_dssp EEECEECSSSC-----CCCEEEEEESSSCEEE-EECCCCSSCCCEEEEESSCEEEEEEEEETTEECTTCSEEE
T ss_pred EEEEEEECCCC-----CCcEEEEEECCCCCEE-EEEECCCCEEEEEEEECCCceEEEEEEECCEECCCcCEEE
Confidence 34556544432 4578889999998655 22333444 6788899999999988865432 3445443
No 15
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=88.54 E-value=1.6 Score=28.51 Aligned_cols=53 Identities=15% Similarity=0.110 Sum_probs=36.1
Q ss_pred CceEEEEEeCCCCCeEEee-eccccc--eEEEEeeccCceeEEEEecCCC-CCceEE
Q 030705 62 SHKLTVRVTSAYGNSYHYA-DRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVT 114 (173)
Q Consensus 62 ~~~v~v~I~dp~g~~l~~~-~~~~~g--~f~f~~~~~G~y~iCf~n~~~~-~~~~~~ 114 (173)
...+.+.|.+|+|..+--. .+...| ..+|++.+.|.|.+.+.-.... .+.+..
T Consensus 30 ~~~l~v~v~~P~G~~~~~~v~d~~dGty~v~ytP~e~G~h~v~V~~~g~~I~GSPF~ 86 (102)
T 2dlg_A 30 SSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQ 86 (102)
T ss_dssp GGGCEEEEECTTSCEEECEEEECSSSEEEEEBCCCTTCEEEEEEESSSSBCSSCSEE
T ss_pred CCCEEEEEECCCCCEeeeEEEECCCCEEEEEEEecCCEeEEEEEEECCEeCCCCCeE
Confidence 4578999999999865321 222333 5678899999999998866543 345533
No 16
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=88.46 E-value=3.2 Score=25.95 Aligned_cols=45 Identities=16% Similarity=0.156 Sum_probs=29.3
Q ss_pred CceEEEEEeCCCCCeEE-eeeccccc--eEEEEeeccCceeEEEEecC
Q 030705 62 SHKLTVRVTSAYGNSYH-YADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (173)
Q Consensus 62 ~~~v~v~I~dp~g~~l~-~~~~~~~g--~f~f~~~~~G~y~iCf~n~~ 106 (173)
+..+.+.|.+|.|..+. .-.+...| ..+|++...|.|.+.+.-..
T Consensus 29 ~~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 76 (89)
T 3cnk_A 29 NNMLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGH 76 (89)
T ss_dssp SCCEEEEEECSSSCCSEEEEEEEETTEEEEEEECCSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCceeEEEEECCCCEEEEEEEECCCccEEEEEEECC
Confidence 45788889999986321 11122233 56678888899988887654
No 17
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.46 E-value=1.1 Score=29.98 Aligned_cols=85 Identities=14% Similarity=0.213 Sum_probs=48.1
Q ss_pred eCCccceeeeeccCC-c--EEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEe-eeccccc--eEEEEeeccCceeE
Q 030705 27 QSAHTKCIAEDIKSN-S--MTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHY-ADRVDSG--QFAFTAAEAGDYMA 100 (173)
Q Consensus 27 ~~~~~~Cf~e~~~~~-~--~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~-~~~~~~g--~f~f~~~~~G~y~i 100 (173)
++...+|...-+... . -...+|.|...+++ ...+.+.|.+|.|..+.- -.+...| ..+|+....|.|.+
T Consensus 20 d~~~~~~~G~Gl~~~~v~~g~~~~F~V~~~daG-----~~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i 94 (119)
T 2e9j_A 20 DASKVTASGPGLSSYGVPASLPVDFAIDARDAG-----EGLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMI 94 (119)
T ss_dssp CGGGEEEESGGGCSSCEETTSCEEEEEEESSCC-----CCCEECCEECTTCCCCCEEEEECCSSEEEEEECCCSCSEEEE
T ss_pred CcceeEEECCCcccCceecCCcEEEEEEECCCC-----CCeEEEEEECCCCCEEEEEEEECCCCEEEEEEEeCCCEEEEE
Confidence 454555555444322 1 12235556544432 457889999999864321 1222344 56788888999999
Q ss_pred EEEecCCC-CCceEEEE
Q 030705 101 CFWAVDHS-PQTTVTID 116 (173)
Q Consensus 101 Cf~n~~~~-~~~~~~V~ 116 (173)
.+.-.... .+.+..|.
T Consensus 95 ~V~~~g~~V~gSPF~v~ 111 (119)
T 2e9j_A 95 GVTYGGDDIPLSPYRIR 111 (119)
T ss_dssp CCEESSCBCTTCSEEEE
T ss_pred EEEECCEECCCCCEEEE
Confidence 88765433 34454443
No 18
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=88.39 E-value=2.2 Score=34.03 Aligned_cols=100 Identities=13% Similarity=0.132 Sum_probs=62.5
Q ss_pred hhhHHHHHHHHHH-HhhcceeEEEEEeCCccceeeeeccC-CcE--EEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeE
Q 030705 2 IRLTLTLVLVIGI-LSSTSQSLRFEIQSAHTKCIAEDIKS-NSM--TVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSY 77 (173)
Q Consensus 2 ~~~~~~~~~~l~l-l~~~~~al~f~l~~~~~~Cf~e~~~~-~~~--v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l 77 (173)
++|+++++..+-= .......+.-...|...+|+.--+.. +.. -..+|.|-..++| ...+.|.|.+|+|..+
T Consensus 227 eksimtYvs~~~~~~~~~~~~l~~k~~pskv~a~GpGle~~g~~vg~p~~F~Vdt~~AG-----~g~l~v~V~~P~G~~~ 301 (347)
T 4b7l_A 227 EHSVMTYLSQFPKAKLKPGAPLKPKLNPKKARAYGRGIEPTGNMVKQPAKFTVDTISAG-----QGDVMVFVEDPEGNKE 301 (347)
T ss_dssp HHHHHHHHTTGGGCCCCTTCCCCCSCCGGGCEEESGGGSSSCCCTTSCEEEEEECTTTC-----SCCEEEEEECTTSCEE
T ss_pred hhHHHHHHHHHhhhccCccccccccccccceeEEeccccccCceeCCEEEEEEEeCCCC-----CCceEEEEECCCCCee
Confidence 3566666655431 12344455556777788888887754 211 1346667655443 4579999999999854
Q ss_pred E---eeeccccc--eEEEEeeccCceeEEEEecC
Q 030705 78 H---YADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (173)
Q Consensus 78 ~---~~~~~~~g--~f~f~~~~~G~y~iCf~n~~ 106 (173)
- ...+...| ..+|++.+.|.|.+-+.-..
T Consensus 302 ~~~v~~~~~~~gty~v~y~P~~~G~~~I~V~~~g 335 (347)
T 4b7l_A 302 EAQVTPDSDKNKTYSVEYLPKVTGLHKVTVLFAG 335 (347)
T ss_dssp ECEEEESSTTCSEEEEEECCCSSSEEEEEEEETT
T ss_pred cCEEEEEcCCCCEEEEEEEECCCEeEEEEEEECC
Confidence 3 22223344 46788999999998777654
No 19
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=87.24 E-value=2.6 Score=27.86 Aligned_cols=56 Identities=18% Similarity=0.140 Sum_probs=39.9
Q ss_pred CcEEEEEEEEEcCCCCCCCCCCceEEEEEe-CCCCCeEEeeecccc--ceEEEEee--ccCceeEEEEecC
Q 030705 41 NSMTVGKYNVVNPNDGHPLPESHKLTVRVT-SAYGNSYHYADRVDS--GQFAFTAA--EAGDYMACFWAVD 106 (173)
Q Consensus 41 ~~~v~~~y~v~~~~~~~~~~~~~~v~v~I~-dp~g~~l~~~~~~~~--g~f~f~~~--~~G~y~iCf~n~~ 106 (173)
+..+.++|... ...+.++|+ |..|++||+..-... ..+++... .+|.|.+=+.+..
T Consensus 37 ~~~L~I~F~~~----------~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~~ 97 (108)
T 3d33_A 37 GYLLTLKNASP----------DRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGTP 97 (108)
T ss_dssp TTEEEEEESSC----------CSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEES
T ss_pred CCEEEEEECCc----------CCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeCC
Confidence 45666676222 358999999 899999998754333 35566654 5799999998883
No 20
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=87.16 E-value=5.1 Score=26.90 Aligned_cols=65 Identities=22% Similarity=0.283 Sum_probs=40.8
Q ss_pred EEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEee-eccccc--eEEEEeeccCceeEEEEecCCC-CCceEEEE
Q 030705 47 KYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYA-DRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (173)
Q Consensus 47 ~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~-~~~~~g--~f~f~~~~~G~y~iCf~n~~~~-~~~~~~V~ 116 (173)
.|.|...+++ ...+.+.|.+|.|..+.-+ .+...| ...|++...|.|.+++.-.... .+.+..|.
T Consensus 32 ~F~V~a~daG-----~~~l~V~I~~p~g~~v~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 100 (124)
T 2dmb_A 32 GFVVDAKTAG-----KGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVM 100 (124)
T ss_dssp EEEEECSSSC-----SCCEEEEEECTTSCBCCCEEEECTTSCEEEEEECSSCEEEEEEEEESSCBCTTCSEEEE
T ss_pred EEEEEEecCC-----CCcEEEEEECCCCCEEeeEEEeCCCCEEEEEEEcCCCEEEEEEEEECCEECCCCCeEEE
Confidence 4556544432 4578999999998644221 122334 5678899999999998876543 34454443
No 21
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=87.12 E-value=4.2 Score=25.95 Aligned_cols=64 Identities=14% Similarity=0.084 Sum_probs=39.3
Q ss_pred CCcEEEEEEEEEcCCCCCCCCC-CceEEEEEeCCCCCeEEeeecc--ccceE--EEEee---ccCceeEEEEecC
Q 030705 40 SNSMTVGKYNVVNPNDGHPLPE-SHKLTVRVTSAYGNSYHYADRV--DSGQF--AFTAA---EAGDYMACFWAVD 106 (173)
Q Consensus 40 ~~~~v~~~y~v~~~~~~~~~~~-~~~v~v~I~dp~g~~l~~~~~~--~~g~f--~f~~~---~~G~y~iCf~n~~ 106 (173)
.|+.|.+..-+.+.+. .|. +..+.+.|.||+|+.+.++... ..|.+ +|... ..|.|++......
T Consensus 15 PGetV~~~~~~~~~~~---~p~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~~ 86 (102)
T 2p9r_A 15 PGQTVKFRVVSMDENF---HPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKS 86 (102)
T ss_dssp TTCEEEEEEEEECGGG---CBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTT
T ss_pred CCCEEEEEEEEECCCC---cCCCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEECC
Confidence 4667766655554431 232 3347899999999998764322 34544 33332 3599999888643
No 22
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=86.71 E-value=1.4 Score=29.44 Aligned_cols=54 Identities=15% Similarity=0.177 Sum_probs=36.2
Q ss_pred CceEEEEEeCCCCCeEEe---eeccccceEEEEeeccCceeEEEEecCCC-CCceEEE
Q 030705 62 SHKLTVRVTSAYGNSYHY---ADRVDSGQFAFTAAEAGDYMACFWAVDHS-PQTTVTI 115 (173)
Q Consensus 62 ~~~v~v~I~dp~g~~l~~---~~~~~~g~f~f~~~~~G~y~iCf~n~~~~-~~~~~~V 115 (173)
...+.+.|.+|+|..+-- ....-.-..+|+..+.|.|.+.+.-.... .+.+..|
T Consensus 44 ~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~e~G~h~v~V~~~g~~I~GSPF~v 101 (116)
T 2dmc_A 44 LSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSI 101 (116)
T ss_dssp STTBCCEEECTTSCBCCEEEEEETTTEEEEEECCCSCEEEEEECBBSSSBCTTCSEEE
T ss_pred CCCEEEEEECCCCCEEeeEEEeCCCCeEEEEEEeCCCeeEEEEEEECCEECCCCCeEE
Confidence 457888999999974321 12222346789999999999988876543 3555443
No 23
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=86.70 E-value=3.5 Score=28.25 Aligned_cols=57 Identities=16% Similarity=0.110 Sum_probs=39.5
Q ss_pred cEEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeee--ccccceEEEEee---------ccCceeEEEEecC
Q 030705 42 SMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYAD--RVDSGQFAFTAA---------EAGDYMACFWAVD 106 (173)
Q Consensus 42 ~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~--~~~~g~f~f~~~---------~~G~y~iCf~n~~ 106 (173)
..+.+.|.+... ...+.+.|+|.+|++|.+-. ..+.|.+.|+-. .+|.|.+-+....
T Consensus 24 ~~~~~~~~l~~~--------a~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a~~ 91 (138)
T 3osv_A 24 DTFKASLNLPVS--------SSNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTSI 91 (138)
T ss_dssp SCEEEEEEESBC--------EEEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEEEE
T ss_pred CeEEEEEECCCC--------CcEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEEEc
Confidence 346777777543 34899999999999998643 234565555442 2588999887664
No 24
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=86.62 E-value=3.7 Score=26.97 Aligned_cols=73 Identities=8% Similarity=-0.072 Sum_probs=50.6
Q ss_pred EEEEEeCCccceeeeeccCCcEEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEee---eccccceEEEEeeccCce
Q 030705 22 LRFEIQSAHTKCIAEDIKSNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYA---DRVDSGQFAFTAAEAGDY 98 (173)
Q Consensus 22 l~f~l~~~~~~Cf~e~~~~~~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~---~~~~~g~f~f~~~~~G~y 98 (173)
+.=.|.+++...+.-.+.+|..++++ +... ...+.|..|.+...... ......+++.+...+|.|
T Consensus 18 v~G~I~g~~~~~Y~~~a~aGQ~l~v~--l~s~----------~~~~~i~~pg~~~~~~~~~~~~~~~~~~~~~LP~sG~Y 85 (111)
T 4g9s_B 18 YSGEIKGYDYDTYTFYAKKGQKVHVS--ISNE----------GADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKY 85 (111)
T ss_dssp EEEEEETTCCEEEEEEECTTCEEEEE--ESCT----------TCEEEEECTTCSSCEECSTTCTTCCTTSCEECSSSEEE
T ss_pred EEEEEeCCCceEEEEEecCCCEEEEE--EecC----------CccEEEECCCCccccccccccccCCceEEEEecCCccE
Confidence 34478888889999999999988876 3322 24456888876543322 122345688899999999
Q ss_pred eEEEEecC
Q 030705 99 MACFWAVD 106 (173)
Q Consensus 99 ~iCf~n~~ 106 (173)
.+=+....
T Consensus 86 ~I~V~~~r 93 (111)
T 4g9s_B 86 ELRVLQTR 93 (111)
T ss_dssp EEEEECCH
T ss_pred EEEEEecc
Confidence 99887543
No 25
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.49 E-value=5.9 Score=26.04 Aligned_cols=65 Identities=15% Similarity=0.267 Sum_probs=41.4
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeeccccc--eEEEEeeccCceeEEEEecCCC-CCceEEEE
Q 030705 46 GKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (173)
Q Consensus 46 ~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~~~-~~~~~~V~ 116 (173)
.+|.|...+++ ...+.+.|.+|.+..+. -.+...| ..+|++...|.|.+.+.-.... .+.+..|.
T Consensus 40 ~~F~v~t~dag-----~~~l~v~v~~p~~~~~~-v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 107 (115)
T 2eea_A 40 ATFTIVTEDAG-----EGGLDLAIEGPSKAEIS-CIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAK 107 (115)
T ss_dssp EEEEEECSSCC-----SSCEEEEEESSSCCEEC-CBCCSSSEEEEEEECSSCSCEEEEEEESSSBCTTCSEEEE
T ss_pred EEEEEEcccCC-----CCceEEEEECCCCceEE-EEECCCCEEEEEEEeCCCeeEEEEEEECCEECCCCCEEEE
Confidence 34556655432 45788999999985442 2333445 5788888999999988865432 34554443
No 26
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=84.44 E-value=6.8 Score=26.72 Aligned_cols=54 Identities=17% Similarity=0.179 Sum_probs=37.6
Q ss_pred EEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeee--ccccceEEEEee---------ccCceeEEEEec
Q 030705 43 MTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYAD--RVDSGQFAFTAA---------EAGDYMACFWAV 105 (173)
Q Consensus 43 ~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~--~~~~g~f~f~~~---------~~G~y~iCf~n~ 105 (173)
...+.|+ ... ...+.+.|+|..|++|.+-. ..+.|.+.|+-. .+|.|.+.+...
T Consensus 28 ~~~~~~~-~~~--------a~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a~ 92 (138)
T 3c12_A 28 SAKGVVA-ATS--------AGFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQT 92 (138)
T ss_dssp CEEEEEE-ESS--------SEEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred eEEEEEe-cCC--------CCEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEEE
Confidence 3456666 432 35899999999999998644 244566666542 258999999866
No 27
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.05 E-value=7.6 Score=26.09 Aligned_cols=65 Identities=9% Similarity=0.174 Sum_probs=40.9
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeecccc-ceEEEEeeccCceeEEEEecC-CC-CCceEEEE
Q 030705 46 GKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDS-GQFAFTAAEAGDYMACFWAVD-HS-PQTTVTID 116 (173)
Q Consensus 46 ~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~~-g~f~f~~~~~G~y~iCf~n~~-~~-~~~~~~V~ 116 (173)
..|.+...+++ ...+.+.|.+|.+..+--.+. .. =..+|++...|.|.+.+.-.. .. .+.+..|.
T Consensus 40 ~~F~v~t~daG-----~~~l~v~i~gp~~~~~~~~d~-~dGy~V~Y~P~~~G~y~I~V~~~g~~hI~gSPF~v~ 107 (125)
T 2eec_A 40 SEFFINTTRAG-----PGTLSVTIEGPSKVKMDCQET-PEGYKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAK 107 (125)
T ss_dssp EEEEEECTTTC-----SCCEEEEEESSSCCCCEEEEC-SSSEEEEECCSSCEEEEEEEEESSSCBCTTCSEEEE
T ss_pred EEEEEEEcCCC-----CCcEEEEEECCCCCcceeEEC-CCCEEEEEEcCCCeEEEEEEEECCcccCCCCCeEEE
Confidence 34667665543 457899999998864422221 22 366788888999999887665 32 34554444
No 28
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=83.17 E-value=3.7 Score=27.83 Aligned_cols=18 Identities=39% Similarity=0.606 Sum_probs=12.3
Q ss_pred cceEEEEeeccCceeE-EE
Q 030705 85 SGQFAFTAAEAGDYMA-CF 102 (173)
Q Consensus 85 ~g~f~f~~~~~G~y~i-Cf 102 (173)
...++++..+.|.|.+ |-
T Consensus 102 G~t~~~tF~~~G~y~y~C~ 120 (132)
T 3c75_A 102 DQAYAITFNEAGSYDYFCT 120 (132)
T ss_dssp TEEEEEEECSCEEEEEECS
T ss_pred CCEEEEEcCCCEEEEEEeC
Confidence 3456666678899977 74
No 29
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=82.63 E-value=8.3 Score=25.49 Aligned_cols=65 Identities=15% Similarity=0.322 Sum_probs=42.3
Q ss_pred EEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeeccccc--eEEEEeeccCceeEEEEecCCC-CCceEEE
Q 030705 45 VGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTI 115 (173)
Q Consensus 45 ~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~~~-~~~~~~V 115 (173)
..+|.+...+++ ...+.+.|.+|.+-.+. -.+...| ..+|++...|.|.+.+.-.... .+.+..|
T Consensus 36 ~~~F~v~t~dag-----~~~l~v~v~~p~~~~~~-v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v 103 (119)
T 2k9u_A 36 PAEFSIWTREAG-----AGGLSIAVEGPSKAEIA-FEDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVV 103 (119)
T ss_dssp EEEEEEECCSSC-----SEEEEEEEESSSCCEEE-EECCSSSEEEEEEECCSSEEEEEEEEETSCBCSSCSEEE
T ss_pred eEEEEEEECCCC-----CCcEEEEEeCCCCCeEE-EEECCCCEEEEEEEECCCceEEEEEEECCEECCCCCEEE
Confidence 345666655432 56889999999884432 2233344 5788889999999998866543 3455444
No 30
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=82.36 E-value=6.7 Score=25.64 Aligned_cols=55 Identities=15% Similarity=0.191 Sum_probs=35.3
Q ss_pred CceEEEEEeCCCCCeEEe-eeccccc--eEEEEeeccCceeEEEEecCCC-CCceEEEE
Q 030705 62 SHKLTVRVTSAYGNSYHY-ADRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (173)
Q Consensus 62 ~~~v~v~I~dp~g~~l~~-~~~~~~g--~f~f~~~~~G~y~iCf~n~~~~-~~~~~~V~ 116 (173)
...+.+.|.+|.|..+.- -.+...| ..+|+....|.|.+.+.-.... .+.+..|.
T Consensus 41 ~~~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~V~gSPf~v~ 99 (113)
T 2dia_A 41 PGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVK 99 (113)
T ss_dssp SCCEEEEEEETTTEECEEEEEECTTSEEEEEEECSSCEEEEEEEEETTEECTTCSEEEE
T ss_pred CccEEEEEECCCCCEeeEEEEECCCCEEEEEEEeCCCccEEEEEEECCEECCCCCEEEE
Confidence 457888899888764422 1233344 5678888899999988865432 34454444
No 31
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=81.78 E-value=12 Score=26.80 Aligned_cols=55 Identities=13% Similarity=0.234 Sum_probs=37.6
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeeccccc--eEEEEeeccCceeEEEEecC
Q 030705 46 GKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (173)
Q Consensus 46 ~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~ 106 (173)
..|.|...+++ ...+.+.|.+|.+..+.- .+...| ..+|++...|.|.+++.-..
T Consensus 116 ~~F~V~t~dag-----~g~l~v~I~gp~~~~~~~-~d~~dGty~v~Y~p~~~G~y~i~V~~~g 172 (188)
T 2k7p_A 116 ATFTVNTKDAG-----EGGLSLAIEGPSKAEISC-TDNQDGTCSVSYLPVLPGDYSILVKYNE 172 (188)
T ss_dssp EEEEEECTTCC-----SSCEEEEEECSSCCEEEE-EECTTSEEEEEEECCSSEEEEEEEEETT
T ss_pred EEEEEEeCCCC-----CCCeEEEEeCCCCCeEEE-EECCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 35556655432 346888899998865532 233445 68888999999999998654
No 32
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=80.57 E-value=11 Score=25.43 Aligned_cols=65 Identities=12% Similarity=0.302 Sum_probs=40.7
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeeccccc--eEEEEeeccCceeEEEEecCCC-CCceEEEE
Q 030705 46 GKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (173)
Q Consensus 46 ~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~~~-~~~~~~V~ 116 (173)
..|.+...+++ ...+.+.|.+|.+..+.-. +...| ..+|++...|.|.+.+.-.... .+.+..|.
T Consensus 50 ~~F~V~t~dag-----~~~l~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 117 (131)
T 2di9_A 50 AEFTIDTKGAG-----TGGLGLTVEGPCEAKIECS-DNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKAD 117 (131)
T ss_dssp EEEEEECTTTC-----SSCEEEEECSSSCCEEEEE-ECSSSEEEEEEECSSSSEEEEEEEESSCBCTTCSEEEE
T ss_pred EEEEEEEcCCC-----CCeeEEEEEecCCceEEEE-ECCCCEEEEEEEeCCCeeEEEEEEECCEECCCcCEEEE
Confidence 34556554432 4578888999988644222 22334 5678888999999988865543 34554443
No 33
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=78.68 E-value=11 Score=24.56 Aligned_cols=64 Identities=14% Similarity=0.287 Sum_probs=40.0
Q ss_pred EEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeeccccc--eEEEEeeccCceeEEEEecCCC-CCceEEEE
Q 030705 47 KYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (173)
Q Consensus 47 ~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~~~-~~~~~~V~ 116 (173)
+|.|...+++ ...+.+.|.+|.+-.+.- .+...| ..+|++...|.|.+.+.-.... .+.+..|.
T Consensus 31 ~F~V~t~dag-----~g~l~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 97 (111)
T 2di8_A 31 DFIVDTRDAG-----YGGISLAVEGPSKVDIQT-EDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVK 97 (111)
T ss_dssp EEEEECTTTC-----BCCEEEEEESSSCCCEEC-CBCTTSCEEEEECCCSCSEEEEEEEESSCBCTTCSEEEE
T ss_pred EEEEEECCCC-----CCceEEEEEcCCCceEEE-EECCCCEEEEEEEeCCCeEEEEEEEECCEECCCCCEEEE
Confidence 4556554432 346788889998754432 233344 5778888899999988865543 34554444
No 34
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=78.31 E-value=23 Score=30.06 Aligned_cols=64 Identities=16% Similarity=0.117 Sum_probs=40.7
Q ss_pred CCcEEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeecc-ccceEEEEe--e---ccCceeEEEEecC
Q 030705 40 SNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRV-DSGQFAFTA--A---EAGDYMACFWAVD 106 (173)
Q Consensus 40 ~~~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~-~~g~f~f~~--~---~~G~y~iCf~n~~ 106 (173)
.|+.|++.--+.+.+ .+|.+..+.+.|.||+|+.+.++... ..|-|++.- . ..|.|++-+....
T Consensus 133 PGqtV~~r~i~~d~~---~~p~~~~~~v~i~dp~g~~v~~~~~~~~~G~~~~~f~Lp~~~~~G~w~i~v~~~~ 202 (656)
T 4fxk_A 133 PGQRVRYRVFALDQK---MRPSTDTITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISARFSD 202 (656)
T ss_dssp TTCEEEEEEEEECSS---SSBCCCCEEEEEECTTCCEEEEEEECCTTSEEEEEEECCTTCCSEEEEEEEEESS
T ss_pred CCCEEEEEEEEECCc---cCcCcccceEEEECCCCcEEeeeEEecCCceEEEEecCCCCCCCcCEEEEEEEcC
Confidence 456665554444443 23556689999999999998765432 245544433 2 2499999887654
No 35
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=77.28 E-value=3.5 Score=33.93 Aligned_cols=43 Identities=19% Similarity=0.302 Sum_probs=38.0
Q ss_pred ceEEEEEeCCCCCeEEeeeccccceEEEEeeccCceeEEEEec
Q 030705 63 HKLTVRVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAV 105 (173)
Q Consensus 63 ~~v~v~I~dp~g~~l~~~~~~~~g~f~f~~~~~G~y~iCf~n~ 105 (173)
.++.|.+.|++|.++........|.|.|.--..|.|.+-|..+
T Consensus 330 ~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P 372 (429)
T 3irp_X 330 AGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMP 372 (429)
T ss_dssp TTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCC
T ss_pred CCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECC
Confidence 3788999999999988777778999999999999999999765
No 36
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=76.96 E-value=6.6 Score=25.69 Aligned_cols=64 Identities=17% Similarity=0.324 Sum_probs=39.3
Q ss_pred EEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeeccccc--eEEEEeeccCceeEEEEecCCC-CCceEEEE
Q 030705 47 KYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (173)
Q Consensus 47 ~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~~~-~~~~~~V~ 116 (173)
.|.|...+++ ...+.+.|.+|.+..+. -.+...| ..+|++...|.|.+.+.-.... .+.+..|.
T Consensus 31 ~F~V~t~dag-----~~~l~v~v~gp~~~~~~-v~d~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 97 (111)
T 2d7o_A 31 TFTIVTKDAG-----EGGLSLAVEGPSKAEIT-CKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAK 97 (111)
T ss_dssp EEEEECTTTC-----SSCBCCEEESSSCCCBC-CCCCSSSEEEEEECCSSCEEEEEECBBSSCBCTTCSEEEE
T ss_pred EEEEEECCCC-----CCcEEEEEECCCCceEE-EEECCCCEEEEEEEeCCCeEEEEEEEECCEECCCcCEEEE
Confidence 4455554432 34677888899865432 1233345 5678888999999988865433 34554444
No 37
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=75.85 E-value=6.2 Score=26.55 Aligned_cols=43 Identities=7% Similarity=-0.002 Sum_probs=29.0
Q ss_pred CCcEEEEEEEEEcCCCCCC---CCCCceEEEEEeCCCCCeEEeeec
Q 030705 40 SNSMTVGKYNVVNPNDGHP---LPESHKLTVRVTSAYGNSYHYADR 82 (173)
Q Consensus 40 ~~~~v~~~y~v~~~~~~~~---~~~~~~v~v~I~dp~g~~l~~~~~ 82 (173)
++..+.+.+.|.+.+.... .++++..++.|+|+.|+.||.+.+
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~ 61 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSK 61 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTT
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccc
Confidence 4556666777765543211 135788999999999999996543
No 38
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=73.21 E-value=17 Score=25.94 Aligned_cols=54 Identities=13% Similarity=0.351 Sum_probs=35.6
Q ss_pred EEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeeccccc--eEEEEeeccCceeEEEEecC
Q 030705 47 KYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (173)
Q Consensus 47 ~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~ 106 (173)
.|.|...+++ ...+.+.|.+|.+..+. -.+...| ..+|++...|.|.+++.-..
T Consensus 117 ~F~V~t~dag-----~g~l~v~V~gp~~~~~~-v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 172 (191)
T 2k7q_A 117 EFIIDTRDAG-----YGGLSLSIEGPSKVDIN-TEDLEDGTCRVTYCPTEPGNYIINIKFAD 172 (191)
T ss_dssp EEEEECGGGC-----SEEEEEEEEESSCEEEE-EEECTTSCEEEEEEESSCEEEEEEEEETT
T ss_pred EEEEEeCCCC-----CCceEEEEECCCCceEE-EEECCCCEEEEEEEeCCCceEEEEEEECC
Confidence 5556654432 34688888888875432 2223344 67888888999999888654
No 39
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=73.11 E-value=10 Score=24.69 Aligned_cols=67 Identities=19% Similarity=0.243 Sum_probs=41.2
Q ss_pred EeCCccceeeeeccCCcEEEEEEEEEcCCCCCCCCCCceEEEEEeCC-CCCeEEeeeccccceEEEEe--eccCceeEEE
Q 030705 26 IQSAHTKCIAEDIKSNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSA-YGNSYHYADRVDSGQFAFTA--AEAGDYMACF 102 (173)
Q Consensus 26 l~~~~~~Cf~e~~~~~~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp-~g~~l~~~~~~~~g~f~f~~--~~~G~y~iCf 102 (173)
+.|-.++|-+-+ | .+.+.|.-. -..+.++|.|. .|+.||+.....-...+... ..+|+|.+=+
T Consensus 22 i~P~~~~~A~I~---n-vlsV~F~~~----------~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~IeI 87 (101)
T 3sd2_A 22 IQPTYEKCAILS---N-ILNVSFGRA----------KDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYTIHI 87 (101)
T ss_dssp CCCSSEEEEEET---T-EEEEEESSC----------CSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEEEEE
T ss_pred ecccccccEEEe---C-EEEEEeccC----------CCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEEEEE
Confidence 344444565543 3 666664332 34799999987 79999986544433444444 4478888877
Q ss_pred EecC
Q 030705 103 WAVD 106 (173)
Q Consensus 103 ~n~~ 106 (173)
....
T Consensus 88 ~~~~ 91 (101)
T 3sd2_A 88 ILND 91 (101)
T ss_dssp EETT
T ss_pred EeCC
Confidence 6654
No 40
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=71.41 E-value=14 Score=25.10 Aligned_cols=64 Identities=9% Similarity=0.266 Sum_probs=44.2
Q ss_pred eccCCcEEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeec------------------cccceEEEEeeccCce
Q 030705 37 DIKSNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADR------------------VDSGQFAFTAAEAGDY 98 (173)
Q Consensus 37 ~~~~~~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~------------------~~~g~f~f~~~~~G~y 98 (173)
...++..+.+.|++.... +....+.++.++|++|.+.+. ....+|.......|.|
T Consensus 10 ~~~~~~~Mag~FEi~~~~-------~G~~rfrLka~NGeiI~sSe~Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~~G~~ 82 (130)
T 2k8e_A 10 NFNQGVIMAGWFELSKSS-------DNQFRFVLKAGNGETILTSELYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKF 82 (130)
T ss_dssp ----CCCCCCEEEEEECT-------TCCEEEEEECTTSCEEEECCCBSSHHHHHHHHHHHHHSSSCTTTEEEEEETTTEE
T ss_pred ccCccceeeeeEEEEEcC-------CCCEEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHHhhccccchheeeeccCCCE
Confidence 445666677889998654 447899999999999864321 1245788888888999
Q ss_pred eEEEEecCC
Q 030705 99 MACFWAVDH 107 (173)
Q Consensus 99 ~iCf~n~~~ 107 (173)
.+-+.....
T Consensus 83 ~f~Lka~Ng 91 (130)
T 2k8e_A 83 YFNLKAANH 91 (130)
T ss_dssp EEEEECTTS
T ss_pred EEEEEeCCC
Confidence 888887643
No 41
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=70.90 E-value=27 Score=25.24 Aligned_cols=45 Identities=16% Similarity=0.150 Sum_probs=32.9
Q ss_pred CceEEEEEeCCCCCeEE-eeeccccc--eEEEEeeccCceeEEEEecCC
Q 030705 62 SHKLTVRVTSAYGNSYH-YADRVDSG--QFAFTAAEAGDYMACFWAVDH 107 (173)
Q Consensus 62 ~~~v~v~I~dp~g~~l~-~~~~~~~g--~f~f~~~~~G~y~iCf~n~~~ 107 (173)
...+.+.|.+|.| .+. .-.+...| ..+|+..+.|.|.+++.-...
T Consensus 134 ~~~l~v~i~~p~g-~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~g~ 181 (212)
T 1qfh_A 134 GDKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGK 181 (212)
T ss_dssp CCCEEEEEEECCS-EEEEEEEECSSSEEEEEEEEESSEEEEEEEEETTE
T ss_pred CCcEEEEEECCCC-ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEECCE
Confidence 4579999999999 432 21233455 678999999999999987653
No 42
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=70.57 E-value=12 Score=28.82 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=32.2
Q ss_pred ceEEEEEeCCCCCeEEee-eccccce--EEEEeeccCceeEEEEecCC
Q 030705 63 HKLTVRVTSAYGNSYHYA-DRVDSGQ--FAFTAAEAGDYMACFWAVDH 107 (173)
Q Consensus 63 ~~v~v~I~dp~g~~l~~~-~~~~~g~--f~f~~~~~G~y~iCf~n~~~ 107 (173)
..+.+.|.+|.| .+.-. .+...|. .+|+..+.|.|.+++.-...
T Consensus 234 ~~l~v~i~~p~g-~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~g~ 280 (311)
T 1wlh_A 234 DKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGK 280 (311)
T ss_dssp SCEEEEEESCCS-EEEEEEEECSSSEEEEEEEEECSEEEEEEEEETTE
T ss_pred CcEEEEEECCCC-CceeEEEECCCCEEEEEEECCCCEeEEEEEEECCE
Confidence 468889999998 44322 2334554 78899999999999998654
No 43
>3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell adhesion; 2.00A {Clostridium histolyticum} SCOP: b.23.2.0 PDB: 3jqx_A
Probab=68.59 E-value=23 Score=23.62 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=49.3
Q ss_pred CCccceeeeeccCCcEEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeec-cccceEEEEeeccCceeEEEEecC
Q 030705 28 SAHTKCIAEDIKSNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADR-VDSGQFAFTAAEAGDYMACFWAVD 106 (173)
Q Consensus 28 ~~~~~Cf~e~~~~~~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~-~~~g~f~f~~~~~G~y~iCf~n~~ 106 (173)
......|.-++++...+.+++.-.. +.++...+++.+++.+..... ...-.-+|.+.++|.|-+.+..-.
T Consensus 35 ~dd~D~y~F~V~~~g~v~I~l~~~~---------~~~~~w~ly~~~~nyv~y~~~~gn~~~~~~~~~~pGkYYl~Vy~y~ 105 (121)
T 3jqw_A 35 TSDQDYFYFDVITPGEVKIDINKLG---------YGGATWVVYDENNNAVSYATDDGQNLSGKFKADKPGRYYIHLYMFN 105 (121)
T ss_dssp TTCCEEEEEEESSCEEEEEEEEECS---------SSEEEEEEECTTSCEEEECEECSSEEEEEEEECSCEEEEEEEEEEE
T ss_pred cCCeeEEEEEeCCCCeEEEEEEecC---------CCcEEEEEEeCCCCeEEEeccCCCEEEEEEEeCCCeeEEEEEEEec
Confidence 4558899999999888888855432 457888888888776654331 122233456668899999999865
Q ss_pred C
Q 030705 107 H 107 (173)
Q Consensus 107 ~ 107 (173)
.
T Consensus 106 ~ 106 (121)
T 3jqw_A 106 G 106 (121)
T ss_dssp C
T ss_pred C
Confidence 4
No 44
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=66.86 E-value=30 Score=29.69 Aligned_cols=47 Identities=6% Similarity=-0.051 Sum_probs=27.8
Q ss_pred CCCceEEEEEeCCCCCeEEeeeccccceEEEEee---ccCceeEEEEecC
Q 030705 60 PESHKLTVRVTSAYGNSYHYADRVDSGQFAFTAA---EAGDYMACFWAVD 106 (173)
Q Consensus 60 ~~~~~v~v~I~dp~g~~l~~~~~~~~g~f~f~~~---~~G~y~iCf~n~~ 106 (173)
|.+..+.+.|.||+|+.+..+.-...-.++|... ..|.|++......
T Consensus 134 p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~~ 183 (627)
T 3hrz_A 134 KMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEH 183 (627)
T ss_dssp ----CEEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEETT
T ss_pred ccCccEEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEECC
Confidence 4456789999999999987533222122333332 2488988887543
No 45
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=66.40 E-value=16 Score=24.32 Aligned_cols=86 Identities=15% Similarity=0.207 Sum_probs=47.7
Q ss_pred eCCccceeeeecc-----CCcEEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEe-eeccccc--eEEEEeeccCce
Q 030705 27 QSAHTKCIAEDIK-----SNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHY-ADRVDSG--QFAFTAAEAGDY 98 (173)
Q Consensus 27 ~~~~~~Cf~e~~~-----~~~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~-~~~~~~g--~f~f~~~~~G~y 98 (173)
++...+++..-+. .+... +|.|...+... .....+.+.|.+|.|..+.- -.+...| ..+|++.+.|.|
T Consensus 20 d~s~~~~~G~Gl~~~~~~~g~~~--~F~V~~~d~~~--~G~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~~ 95 (128)
T 2dib_A 20 DTSRIKVFGPGIEGKDVFREATT--DFTVDSRPLTQ--VGGDHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLH 95 (128)
T ss_dssp CCCSCEEESHHHHTSSCCTTCCE--EEEEECSSSCS--SCCSCCCEECCCSSSCCCCCEEEECSSSEEEEEECCSSCSEE
T ss_pred CcceeEEECCCccCCceEecccE--EEEEEECCCCc--CCCccEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCEeE
Confidence 5555566653333 23333 45555432110 12457888999999864321 1222334 567888999999
Q ss_pred eEEEEecCCC-CCceEEEE
Q 030705 99 MACFWAVDHS-PQTTVTID 116 (173)
Q Consensus 99 ~iCf~n~~~~-~~~~~~V~ 116 (173)
.+.+.-.... .+.+..|.
T Consensus 96 ~i~V~~~g~~I~gSPF~v~ 114 (128)
T 2dib_A 96 VVEVTYDDVPIPNSPFKVA 114 (128)
T ss_dssp EEEEBSSSCBCTTCSEEEE
T ss_pred EEEEEECCEECCCCCEEEE
Confidence 9998866543 34454443
No 46
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=66.24 E-value=15 Score=26.24 Aligned_cols=44 Identities=16% Similarity=0.098 Sum_probs=32.1
Q ss_pred ceEEEEEeCCCCCeEEe-eeccccc--eEEEEeeccCceeEEEEecC
Q 030705 63 HKLTVRVTSAYGNSYHY-ADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (173)
Q Consensus 63 ~~v~v~I~dp~g~~l~~-~~~~~~g--~f~f~~~~~G~y~iCf~n~~ 106 (173)
..+.+.|.+|+|+...- -.+...| ...|+..+.|.|.+.+....
T Consensus 34 ~~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~g 80 (188)
T 2k7p_A 34 GEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDN 80 (188)
T ss_dssp SCEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEETT
T ss_pred ceEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEECC
Confidence 47899999999986421 1223345 57888899999999888764
No 47
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=66.03 E-value=62 Score=27.55 Aligned_cols=62 Identities=15% Similarity=0.188 Sum_probs=38.1
Q ss_pred CcEEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeecc---ccceE--EEEee---ccCceeEEEEec
Q 030705 41 NSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRV---DSGQF--AFTAA---EAGDYMACFWAV 105 (173)
Q Consensus 41 ~~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~---~~g~f--~f~~~---~~G~y~iCf~n~ 105 (173)
|+.|++..-+.+.+ ..|.+..+.+.|.||+|+.+.+..-. ..|-+ +|... ..|.|++-+...
T Consensus 120 GqtV~~r~i~~d~~---~~p~~~~v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 189 (645)
T 2hr0_A 120 GSTVLYRIFTVNHK---LLPVGRTVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYE 189 (645)
T ss_dssp TSEEEEEEEEECTT---SCBCCCEEEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEET
T ss_pred CCEEEEEEEEECCC---CcccCceEEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEEC
Confidence 45555444444432 23445678999999999998764322 34544 33332 359999988764
No 48
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=64.90 E-value=23 Score=22.12 Aligned_cols=41 Identities=15% Similarity=0.107 Sum_probs=24.3
Q ss_pred CceEEEEEeCCCCC-eEEeeeccccceEEEEe---------eccCceeEEE
Q 030705 62 SHKLTVRVTSAYGN-SYHYADRVDSGQFAFTA---------AEAGDYMACF 102 (173)
Q Consensus 62 ~~~v~v~I~dp~g~-~l~~~~~~~~g~f~f~~---------~~~G~y~iCf 102 (173)
+-.|.+.+++-..- .+........|.++|++ ...|.|=+--
T Consensus 17 gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~~G~Gd~~v~A~k~G~~g~a~ 67 (82)
T 3e8v_A 17 DATVEFKVYNYAEFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSK 67 (82)
T ss_dssp TCEEEEEEEETTEEEEEEEEECCTTSEEEEECCSEEEEEEEEETTEEEEEE
T ss_pred CCEEEEEEEEchheeEEEEEEECCCceEEEEEcCCceEEEeccCCEEEEEE
Confidence 44677777644211 22233445689999999 7777655443
No 49
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=63.67 E-value=16 Score=26.12 Aligned_cols=45 Identities=20% Similarity=0.261 Sum_probs=32.3
Q ss_pred CceEEEEEeCCCCCeEEee-eccccc--eEEEEeeccCceeEEEEecC
Q 030705 62 SHKLTVRVTSAYGNSYHYA-DRVDSG--QFAFTAAEAGDYMACFWAVD 106 (173)
Q Consensus 62 ~~~v~v~I~dp~g~~l~~~-~~~~~g--~f~f~~~~~G~y~iCf~n~~ 106 (173)
...+.++|.+|+|+.+--. .+...| ..+|++.+.|.|.+-+....
T Consensus 30 ~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~g 77 (191)
T 2k7q_A 30 LSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNG 77 (191)
T ss_dssp SSSEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEECC
Confidence 4579999999999865321 222333 56799999999998887754
No 50
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=63.01 E-value=37 Score=25.86 Aligned_cols=54 Identities=17% Similarity=0.300 Sum_probs=34.3
Q ss_pred EEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeeccccc--eEEEEeeccCceeEEEEecC
Q 030705 47 KYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (173)
Q Consensus 47 ~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~ 106 (173)
+|.|...+++ ...+.+.|..|.+..+. -.+...| ..+|++...|.|.+++.-..
T Consensus 217 ~F~I~~~dag-----~g~l~v~v~gp~~~~~~-~~d~~dGt~~v~y~p~~~G~y~i~V~~~~ 272 (288)
T 2j3s_A 217 EFSIWTREAG-----AGGLAIAVEGPSKAEIS-FEDRKDGSCGVAYVVQEPGDYEVSVKFNE 272 (288)
T ss_dssp EEEEECCBSS-----SEEEEEEEEESSCEEEE-EEECTTSEEEEEEEESSCEEEEEEEEETT
T ss_pred EEEEEeCCCC-----CCceEEEEeCCCCccee-EEECCCCEEEEEEEcCCCeeEEEEEEECC
Confidence 4556554432 45788888888764332 2233344 45788888899988887654
No 51
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=60.29 E-value=30 Score=33.28 Aligned_cols=48 Identities=10% Similarity=0.176 Sum_probs=32.6
Q ss_pred CCCCceEEEEEeCCCCCeEEeeecc-ccceEE---EEee---ccCceeEEEEecC
Q 030705 59 LPESHKLTVRVTSAYGNSYHYADRV-DSGQFA---FTAA---EAGDYMACFWAVD 106 (173)
Q Consensus 59 ~~~~~~v~v~I~dp~g~~l~~~~~~-~~g~f~---f~~~---~~G~y~iCf~n~~ 106 (173)
.|.+..+.+.|.||+|+.+.++... ..|.++ |... ..|.|++=+....
T Consensus 153 ~p~~~~v~v~l~dP~G~~i~~~~~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~~ 207 (1676)
T 3cu7_A 153 KPAKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKE 207 (1676)
T ss_dssp SCCCCCEEEEEEETTTEECCCEEECCSSSEEECCCEECCSSCCCEEEEEEEEBSS
T ss_pred cccccceEEEEECCCCCEEEEEeeecCCCceecceeeCCCCccccceEEEEEecC
Confidence 3445679999999999988765322 356555 3332 3599999887654
No 52
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=59.98 E-value=68 Score=25.97 Aligned_cols=59 Identities=12% Similarity=0.034 Sum_probs=38.6
Q ss_pred cEEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeecc-ccce-EEEEee----ccCceeEEEEecCC
Q 030705 42 SMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRV-DSGQ-FAFTAA----EAGDYMACFWAVDH 107 (173)
Q Consensus 42 ~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~-~~g~-f~f~~~----~~G~y~iCf~n~~~ 107 (173)
..+++.|.+...+ +..+.++|+|..|+.+.+.... ..+. .+|+.. +.|.|.+=+.....
T Consensus 311 g~~~l~f~~~~~~-------~~~v~~~v~d~~~~~~~~~~~~v~~~~~~~~tl~ls~~~aGhh~lvv~~~~~ 375 (391)
T 2xwx_A 311 QPIQLDLTLEAQG-------EMSAELTVYNHHQKPLASWSQAMTDGELKSITLELSEAKAGHHMLVSRIKDR 375 (391)
T ss_dssp SCCEEEEEEEEES-------SEEEEEEEECTTSCEEEEEEEEECTTCEEEEEEECSCCCSEEEEEEEEEEET
T ss_pred CcEEEEEEEEecC-------ceEEEEEEEcCCCCccceeeEEEcCCCcceEEEEccCCCCccEEEEEEEECC
Confidence 3444455555332 5789999999999998765422 2333 556554 56999988887654
No 53
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=57.46 E-value=36 Score=24.15 Aligned_cols=39 Identities=15% Similarity=-0.045 Sum_probs=23.9
Q ss_pred ccCCcEEEEEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEee
Q 030705 38 IKSNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYA 80 (173)
Q Consensus 38 ~~~~~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~ 80 (173)
+..++.+.+.+.+.-... -.+..+.+.|+|..|..|+..
T Consensus 66 ~~~Ge~v~l~i~~~~~~~----i~~~v~G~~Ik~~~G~~I~g~ 104 (188)
T 2r5o_A 66 LTGNQQTDFLMKVVFEYD----FDCVVPGILIKTLDGLFLYGT 104 (188)
T ss_dssp EETTCEEEEEEEEEESSC----EEEEEEEEEEEETTCCEEEEE
T ss_pred EeCCCEEEEEEEEEECCc----CCccEEEEEEECCCCCEEEec
Confidence 445555554444432110 025688899999999998854
No 54
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.31 E-value=34 Score=21.75 Aligned_cols=55 Identities=15% Similarity=0.242 Sum_probs=33.2
Q ss_pred CceEEEEEeCCCC--CeE-Eeeeccccc--eEEEEeeccCceeEEEEecCCC-CCceEEEE
Q 030705 62 SHKLTVRVTSAYG--NSY-HYADRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (173)
Q Consensus 62 ~~~v~v~I~dp~g--~~l-~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~~~-~~~~~~V~ 116 (173)
+..+.+.|.+|.+ ..+ ..-.+...| ..+|++...|.|.+++.-.... .+.+..|.
T Consensus 48 g~~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~~~g~~i~gSPF~v~ 108 (113)
T 2ds4_A 48 GDNVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVT 108 (113)
T ss_dssp CCCEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSSSEEEEEEEEESSCBCTTCSEEEE
T ss_pred CceEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCCCeEEEEEEEECCEECCCCCEEEE
Confidence 3468888998886 222 122233344 4667888889999888866543 33444433
No 55
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=56.50 E-value=17 Score=22.78 Aligned_cols=18 Identities=22% Similarity=0.506 Sum_probs=14.7
Q ss_pred ccceEEEEeeccCceeE-E
Q 030705 84 DSGQFAFTAAEAGDYMA-C 101 (173)
Q Consensus 84 ~~g~f~f~~~~~G~y~i-C 101 (173)
....+.|+..+.|.|.+ |
T Consensus 67 ~~~~~~~t~~~~G~Y~y~C 85 (100)
T 4hci_A 67 KEKNITVKPKSAGTYELIC 85 (100)
T ss_dssp CEEEEEECCCSCEEEEEEC
T ss_pred cceeEEEecccCceEEEEC
Confidence 35678889899999976 8
No 56
>3fn2_A Putative sensor histidine kinase domain; GUT microbiome, structural genomics protein structure initiative; HET: MSE; 1.90A {Clostridium symbiosum atcc 14940}
Probab=51.08 E-value=19 Score=23.45 Aligned_cols=39 Identities=23% Similarity=0.278 Sum_probs=28.9
Q ss_pred EEEEeCCCCCeEEeeeccccceEEEEeeccCce---eEEEEe
Q 030705 66 TVRVTSAYGNSYHYADRVDSGQFAFTAAEAGDY---MACFWA 104 (173)
Q Consensus 66 ~v~I~dp~g~~l~~~~~~~~g~f~f~~~~~G~y---~iCf~n 104 (173)
.+.|.|..|.++......+.+..++-+..+|.+ ++||.-
T Consensus 51 ~lrI~D~~G~vi~~~~~~a~~~~~vLa~~g~n~lGW~Ley~l 92 (106)
T 3fn2_A 51 YVRITDKDGQVITYEDGSVQDKTVFLTNEGANKLGWKLEFLI 92 (106)
T ss_dssp EEEEECTTSCBCSCCCSCSTTEEEEEEECSCCTTCCEEEEEE
T ss_pred cEEEEcCCCCEEecCCCCcCcceeehhhcCCCccceEEEEEe
Confidence 467999999998855556678889999888754 555543
No 57
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=46.31 E-value=1e+02 Score=29.84 Aligned_cols=46 Identities=7% Similarity=-0.037 Sum_probs=29.7
Q ss_pred CCCceEEEEEeCCCCCeEEeeeccccceEEEEeec---cCceeEEEEec
Q 030705 60 PESHKLTVRVTSAYGNSYHYADRVDSGQFAFTAAE---AGDYMACFWAV 105 (173)
Q Consensus 60 ~~~~~v~v~I~dp~g~~l~~~~~~~~g~f~f~~~~---~G~y~iCf~n~ 105 (173)
|.+..+.+.|.||+|+.+.++.-...-..+|.... .|.|++.....
T Consensus 156 p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~L~~~~~~G~w~I~v~~~ 204 (1642)
T 3prx_B 156 KMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 204 (1642)
T ss_dssp --CCCEEEEEECSSCCEEEEEEECTTCCCEEECCSSCCCEEEEEEEEET
T ss_pred ccCceEEEEEECCCCCEEEEEEecccceEEEEcCCCCCceeEEEEEEeC
Confidence 44667899999999999987543222233444432 48898888754
No 58
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=45.24 E-value=89 Score=30.08 Aligned_cols=46 Identities=11% Similarity=0.209 Sum_probs=31.0
Q ss_pred CCCceEEEEEeCCCCCeEEeeecc---ccce--EEEEeec---cCceeEEEEec
Q 030705 60 PESHKLTVRVTSAYGNSYHYADRV---DSGQ--FAFTAAE---AGDYMACFWAV 105 (173)
Q Consensus 60 ~~~~~v~v~I~dp~g~~l~~~~~~---~~g~--f~f~~~~---~G~y~iCf~n~ 105 (173)
|.+..+.+.|.||+|+.+.+..-. ..|. ++|.... .|.|++=+...
T Consensus 157 p~~~~v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 210 (1661)
T 2b39_A 157 PVGQTVFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYE 210 (1661)
T ss_dssp CCCCCEEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEET
T ss_pred ccCceEEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEee
Confidence 445678999999999988764322 3453 3444432 49999988753
No 59
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=43.40 E-value=34 Score=22.76 Aligned_cols=55 Identities=16% Similarity=0.100 Sum_probs=37.0
Q ss_pred eEEEEEeCCCCCeEEeeeccccceEEEEeeccCceeEEEEecCCCCCceEEEEEEEe
Q 030705 64 KLTVRVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAVDHSPQTTVTIDFDWR 120 (173)
Q Consensus 64 ~v~v~I~dp~g~~l~~~~~~~~g~f~f~~~~~G~y~iCf~n~~~~~~~~~~V~f~~~ 120 (173)
+..+.|++.+|+.+..+. +.|.+.|.--..|.|.+-=............+.|.+.
T Consensus 44 GA~F~l~~~~g~~v~~~~--sdG~~~~~~L~~G~Y~l~EtkAP~GY~l~~~i~ftV~ 98 (121)
T 2x5p_A 44 GATMELRDSSGKTISTWI--SDGQVKDFYLMPGKYTFVETAAPDGYEVATAITFTVN 98 (121)
T ss_dssp CCEEEEECTTSCEEEEEE--CCSSCEEEEECSEEEEEEEEECCTTCCCCCCEEEEEC
T ss_pred CCEEEEEECCCCEEEEEE--eCCEEEEcccCCcEEEEEEEeCCCCcccCCCEEEEEc
Confidence 677889999999886553 4688888888889998865544332111234555553
No 60
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=41.34 E-value=95 Score=22.19 Aligned_cols=45 Identities=13% Similarity=0.178 Sum_probs=30.8
Q ss_pred CceEEEEEeCCCCCeEEee-eccccc--eEEEEeeccCceeEEEEecC
Q 030705 62 SHKLTVRVTSAYGNSYHYA-DRVDSG--QFAFTAAEAGDYMACFWAVD 106 (173)
Q Consensus 62 ~~~v~v~I~dp~g~~l~~~-~~~~~g--~f~f~~~~~G~y~iCf~n~~ 106 (173)
+..+.+.|.+|.|..+.-. .+...| ..+|+....|.|.+.+....
T Consensus 43 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~g 90 (212)
T 1qfh_A 43 GDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG 90 (212)
T ss_dssp CCCEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEETT
T ss_pred CCeEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEECC
Confidence 4578999999998644221 222334 56778888999999887654
No 61
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=41.16 E-value=2.3e+02 Score=26.47 Aligned_cols=43 Identities=14% Similarity=0.095 Sum_probs=29.6
Q ss_pred ceEEEEEeCCCCCeEEeeecc--ccceEE--EEee---ccCceeEEEEec
Q 030705 63 HKLTVRVTSAYGNSYHYADRV--DSGQFA--FTAA---EAGDYMACFWAV 105 (173)
Q Consensus 63 ~~v~v~I~dp~g~~l~~~~~~--~~g~f~--f~~~---~~G~y~iCf~n~ 105 (173)
..+.+.|.||+|+.+.++... ..|.++ |... ..|.|++=....
T Consensus 135 ~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~ 184 (1325)
T 2pn5_A 135 KSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVE 184 (1325)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEET
T ss_pred ccEEEEEECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeC
Confidence 468999999999999876442 345443 3332 359999988754
No 62
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=41.00 E-value=33 Score=16.84 Aligned_cols=23 Identities=13% Similarity=0.264 Sum_probs=14.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHH
Q 030705 138 DVMELELKKLYDTVSSIHQEMFY 160 (173)
Q Consensus 138 ~~l~~~l~~l~~~l~~I~~~q~y 160 (173)
..++.++++|+.-++.++...+-
T Consensus 2 srlee~~r~l~~ivq~lq~r~dr 24 (32)
T 2akf_A 2 SRLEEDVRNLNAIVQKLQERLDR 24 (32)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHH
Confidence 35677777777766666554443
No 63
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=40.99 E-value=1.1e+02 Score=23.00 Aligned_cols=54 Identities=13% Similarity=0.319 Sum_probs=35.1
Q ss_pred EEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeeccccc--eEEEEeeccCceeEEEEecC
Q 030705 47 KYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (173)
Q Consensus 47 ~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~ 106 (173)
+|.|...+++ ...+.+.|.+|.+-.+.-. +...| ..+|++...|.|.+-+.-..
T Consensus 26 ~F~I~~~dag-----~g~l~v~i~~p~~~~~~~~-d~~dGty~v~y~p~~~G~y~i~V~~~g 81 (288)
T 2j3s_A 26 EFIIDTRDAG-----YGGLSLSIEGPSKVDINTE-DLEDGTCRVTYCPTEPGNYIINIKFAD 81 (288)
T ss_dssp EEEEECTTSB-----SCCEEEEEESSSCCEEEEE-ECTTSEEEEEEECSSCEEEEEEEEETT
T ss_pred EEEEEeccCC-----CCcEEEEEECCCCceeEEE-ECCCCEEEEEEECCCCeEEEEEEEECC
Confidence 4556554432 3468888889987554322 23344 57888899999999877653
No 64
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=39.34 E-value=41 Score=17.37 Aligned_cols=28 Identities=11% Similarity=0.266 Sum_probs=18.7
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 030705 136 SVDVMELELKKLYDTVSSIHQEMFYLRE 163 (173)
Q Consensus 136 ~l~~l~~~l~~l~~~l~~I~~~q~y~r~ 163 (173)
.|+.++.+++.|...-..+.++-.-+++
T Consensus 2 RMnQLE~KVEeLl~~~~~Le~eV~RLk~ 29 (36)
T 1kd8_B 2 KVKQLKAKVEELKSKLWHLKNKVARLKK 29 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4667777777777777777666655543
No 65
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=37.02 E-value=44 Score=17.04 Aligned_cols=27 Identities=11% Similarity=0.220 Sum_probs=18.4
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHH
Q 030705 136 SVDVMELELKKLYDTVSSIHQEMFYLR 162 (173)
Q Consensus 136 ~l~~l~~~l~~l~~~l~~I~~~q~y~r 162 (173)
.|+.+|.+++.|...-..+.++-.-++
T Consensus 2 RM~QLEdKVEeLl~~n~~Le~EV~RLk 28 (34)
T 1uo4_A 2 RMKQIEDKGEEILSKLYHIENELARIK 28 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 366777777777777777776665544
No 66
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=36.94 E-value=57 Score=18.37 Aligned_cols=27 Identities=7% Similarity=0.025 Sum_probs=17.8
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHH
Q 030705 136 SVDVMELELKKLYDTVSSIHQEMFYLR 162 (173)
Q Consensus 136 ~l~~l~~~l~~l~~~l~~I~~~q~y~r 162 (173)
+++.|..++..|..+++.+..+...++
T Consensus 5 ki~~Lss~V~~L~~kVdqLssdV~al~ 31 (52)
T 1jcd_A 5 KADQASSDAQTANAKADQASNDANAAR 31 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666777777777777766665555
No 67
>3hfe_A Potassium voltage-gated channel subfamily KQT MEM; trimer, atrial fibrillation, cell membrane, cytoplasmic VESI deafness, disease mutation; 1.70A {Homo sapiens} PDB: 3hfc_A
Probab=36.14 E-value=36 Score=16.96 Aligned_cols=18 Identities=17% Similarity=0.270 Sum_probs=11.4
Q ss_pred cchHHHHHHHHHHHHHHH
Q 030705 137 VDVMELELKKLYDTVSSI 154 (173)
Q Consensus 137 l~~l~~~l~~l~~~l~~I 154 (173)
+..+|.++..+...|+.|
T Consensus 12 LnRvE~k~t~MD~kL~~i 29 (31)
T 3hfe_A 12 LNRVEDKVTQLDQRLALI 29 (31)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 556666666666666654
No 68
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=35.21 E-value=76 Score=19.26 Aligned_cols=33 Identities=18% Similarity=0.374 Sum_probs=28.8
Q ss_pred hhccCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 030705 131 VAKKGSVDVMELELKKLYDTVSSIHQEMFYLRE 163 (173)
Q Consensus 131 ~a~~~~l~~l~~~l~~l~~~l~~I~~~q~y~r~ 163 (173)
.|-.+.++.+..+|..|.++...+..|-.++|.
T Consensus 11 ~AVREEVevLKe~I~EL~e~~~qLE~EN~~Lk~ 43 (78)
T 1dip_A 11 YAVREEVEILKEQIRELVEKNSQLERENTLLKT 43 (78)
T ss_dssp GTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456688999999999999999999998888875
No 69
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=35.06 E-value=56 Score=17.66 Aligned_cols=21 Identities=10% Similarity=0.188 Sum_probs=15.0
Q ss_pred chHHHHHHHHHHHHHHHHHHH
Q 030705 138 DVMELELKKLYDTVSSIHQEM 158 (173)
Q Consensus 138 ~~l~~~l~~l~~~l~~I~~~q 158 (173)
+.+|.+|..|+.+++.|....
T Consensus 19 e~LE~Ri~~LE~KLd~L~~~l 39 (43)
T 2pnv_A 19 EDFEKRIVTLETKLETLIGSI 39 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 456777888888887776543
No 70
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=34.88 E-value=48 Score=16.85 Aligned_cols=27 Identities=11% Similarity=0.135 Sum_probs=15.9
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHH
Q 030705 136 SVDVMELELKKLYDTVSSIHQEMFYLR 162 (173)
Q Consensus 136 ~l~~l~~~l~~l~~~l~~I~~~q~y~r 162 (173)
.|+.++.+++.|...-..+.++-.-++
T Consensus 2 RMnQLEdKVEeLl~~~~~Le~EV~RLk 28 (34)
T 3c3f_A 2 RMXQIEXKLEXILSXLYHXENEXARIX 28 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 355666666666666666655554443
No 71
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=34.48 E-value=92 Score=20.66 Aligned_cols=19 Identities=26% Similarity=0.464 Sum_probs=14.8
Q ss_pred ccceEEEEeeccCceeE-EE
Q 030705 84 DSGQFAFTAAEAGDYMA-CF 102 (173)
Q Consensus 84 ~~g~f~f~~~~~G~y~i-Cf 102 (173)
+...|+++....|.|.+ |-
T Consensus 62 pGet~s~TF~~pG~y~y~C~ 81 (127)
T 3tu6_A 62 INEEITVTLSKPGVYMYQCA 81 (127)
T ss_dssp TTCCCEEECCSCEEEEEECT
T ss_pred CCCEEEEEeCCCeEEEEEeC
Confidence 34468888889999977 87
No 72
>3pay_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, cell adhesion; 2.50A {Bacteroides ovatus}
Probab=33.49 E-value=24 Score=27.61 Aligned_cols=72 Identities=14% Similarity=0.122 Sum_probs=37.6
Q ss_pred eeeeccC-CcEEEEEEEEE-cCCCCCCCCCCceEEEEEeCCCCCeEEeeeccc---cceEEEEee---ccCceeE-EEEe
Q 030705 34 IAEDIKS-NSMTVGKYNVV-NPNDGHPLPESHKLTVRVTSAYGNSYHYADRVD---SGQFAFTAA---EAGDYMA-CFWA 104 (173)
Q Consensus 34 f~e~~~~-~~~v~~~y~v~-~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~~~---~g~f~f~~~---~~G~y~i-Cf~n 104 (173)
++|+.+. ...+.+.|... .....+. ..=..|.+.|+|.+|+.+.+..... .+.+..... ..|.|++ |-.|
T Consensus 6 I~eDl~dC~~~L~F~Ydyn~~~~d~f~-~~V~~v~lyvFD~~G~~v~~~~~~~~~L~~~~~m~l~~~l~~G~Y~~VaWgg 84 (314)
T 3pay_A 6 IREDLPRCELWLEFVFDYNMEYADAFN-PQVKSVDVLVFDSDDKLLFTKSVKVAALVGGNRMSLTDELDFGSYKVLTVGS 84 (314)
T ss_dssp SCSSSCCCCEEEEEECCCSTTCSCCHH-HHCCEEEEEEECTTSBEEEEEEEEGGGSBTTTEEECTTTCCSEEEEEEEEES
T ss_pred cccCccCCCCeEEEEEecCCCcccchh-cccCEEEEEEEcCCCCEEEEEecchhhccCCceEecCCcCCCCcEEEEEEeC
Confidence 6666654 24555555332 1110000 0124899999999999887543221 112244433 2577766 5555
Q ss_pred cC
Q 030705 105 VD 106 (173)
Q Consensus 105 ~~ 106 (173)
..
T Consensus 85 ~~ 86 (314)
T 3pay_A 85 LS 86 (314)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 73
>3gf8_A Putative polysaccharide binding proteins (DUF1812; NP_809975.1, joint center for structural genomics; HET: MSE; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=31.62 E-value=29 Score=26.79 Aligned_cols=44 Identities=14% Similarity=0.242 Sum_probs=27.9
Q ss_pred ceEEEEEeCCCCCeEEeeecc--c--cceEEEEe-eccCceeE-EEEecC
Q 030705 63 HKLTVRVTSAYGNSYHYADRV--D--SGQFAFTA-AEAGDYMA-CFWAVD 106 (173)
Q Consensus 63 ~~v~v~I~dp~g~~l~~~~~~--~--~g~f~f~~-~~~G~y~i-Cf~n~~ 106 (173)
..|.+.|+|.+|+.|.+.... . .+.+.... -..|.|++ |-.|..
T Consensus 37 ~~V~lyvFD~~G~~v~~~~~~~~~L~~~~y~m~l~Lp~G~Y~~VaWgg~~ 86 (296)
T 3gf8_A 37 DKVELYVFDKNGKYLFKQAEEGSALSTGNYLMEVELPVGQYQFMAWAGAR 86 (296)
T ss_dssp CEEEEEEECTTSBEEEEEEEESGGGGSSCCCEEECCCSEEEEEEEEESCC
T ss_pred CEEEEEEEcCCCCEEEEEecchhhcccCceEEEEecCCCcEEEEEEECCC
Confidence 489999999999988754322 1 23233332 23488877 666654
No 74
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=31.46 E-value=1.1e+02 Score=20.08 Aligned_cols=19 Identities=26% Similarity=0.485 Sum_probs=15.1
Q ss_pred ccceEEEEeeccCceeE-EE
Q 030705 84 DSGQFAFTAAEAGDYMA-CF 102 (173)
Q Consensus 84 ~~g~f~f~~~~~G~y~i-Cf 102 (173)
+...|+++....|.|.+ |-
T Consensus 60 pg~t~s~TF~~pG~y~y~C~ 79 (123)
T 3erx_A 60 INESYTLTVTEPGLYGVKCT 79 (123)
T ss_dssp TTCCEEEEECSCEEEEEECG
T ss_pred CCCEEEEEeCCCeEEEEEeC
Confidence 34568888889999987 87
No 75
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=30.25 E-value=1.1e+02 Score=19.74 Aligned_cols=73 Identities=19% Similarity=0.048 Sum_probs=43.3
Q ss_pred eCCccceeeeeccCCcEEEEEEEEEcCCCCCCCCCCceEEEEEeCCCC------CeE---Eeee--ccccceEEEEeecc
Q 030705 27 QSAHTKCIAEDIKSNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYG------NSY---HYAD--RVDSGQFAFTAAEA 95 (173)
Q Consensus 27 ~~~~~~Cf~e~~~~~~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g------~~l---~~~~--~~~~g~f~f~~~~~ 95 (173)
|..+.-|+-.-.-.+..+.|+-.|..-.- ...|.|...+..+ ..+ |... .....+|+|...-+
T Consensus 4 ~~~~~V~LE~~~~~~~~l~GtV~V~Nlaf------eK~V~VR~T~~~D~W~t~~~dv~a~y~~~~~~~~~D~F~F~i~l~ 77 (106)
T 2djm_A 4 PSSASVQLDSYNYDGSTFSGKIYVKNIAY------SKKVTVVYADGSDNWNNNGNIIAASFSGPISGSNYEYWTFSASVK 77 (106)
T ss_dssp CSSSSEEEEEEEESSSCEEEEEEECCSSS------CEEEEEEEEETTSSCSSCCCEEECEEEEECTTSSCEEEEEEECCS
T ss_pred CcCCcEEEEEEEECCCEEEEEEEEeecCc------CcEEEEEECCCcCCCccccEEEEEEEecCCCCCCeEEEEEEEECC
Confidence 44555565554456778999988876541 4566666663311 111 2221 23367899999888
Q ss_pred CceeEEEEec
Q 030705 96 GDYMACFWAV 105 (173)
Q Consensus 96 G~y~iCf~n~ 105 (173)
|.-+||+.=.
T Consensus 78 ~~~eFcIrY~ 87 (106)
T 2djm_A 78 GIKEFYIKYE 87 (106)
T ss_dssp SEEEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 8777776543
No 76
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=30.14 E-value=3.7e+02 Score=25.61 Aligned_cols=46 Identities=17% Similarity=0.255 Sum_probs=29.1
Q ss_pred CCCceE-EEEEeCCCCCeEEeeecc--ccceE--EEEeec---cCceeEEEEec
Q 030705 60 PESHKL-TVRVTSAYGNSYHYADRV--DSGQF--AFTAAE---AGDYMACFWAV 105 (173)
Q Consensus 60 ~~~~~v-~v~I~dp~g~~l~~~~~~--~~g~f--~f~~~~---~G~y~iCf~n~ 105 (173)
|....+ .++|.||+|+.+.++... ..|.+ +|.... .|.|+|-....
T Consensus 134 p~~~~~~~v~i~dp~g~~i~~~~~~~~~~G~~~~~f~L~~~~~~G~w~I~~~~~ 187 (1451)
T 4acq_A 134 PLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 187 (1451)
T ss_dssp BCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred CccCceeEEEEECCCCCEEEEeeeccCCCCeEEEEeECCCCCCceeEEEEEEec
Confidence 444455 689999999999875432 23433 333322 48898887765
No 77
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=29.02 E-value=65 Score=16.59 Aligned_cols=27 Identities=22% Similarity=0.315 Sum_probs=17.9
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHH
Q 030705 136 SVDVMELELKKLYDTVSSIHQEMFYLR 162 (173)
Q Consensus 136 ~l~~l~~~l~~l~~~l~~I~~~q~y~r 162 (173)
.|+.++.++..|...-..+.++-.-++
T Consensus 2 RMnQLE~kVEeLl~~~~~Le~EV~RL~ 28 (36)
T 1kd8_A 2 EVKQLEAEVEEIESEVWHLENEVARLE 28 (36)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 466777777777777666666655444
No 78
>3l4f_A RHO guanine nucleotide exchange factor 7; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=28.78 E-value=86 Score=18.27 Aligned_cols=23 Identities=17% Similarity=0.192 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 030705 140 MELELKKLYDTVSSIHQEMFYLR 162 (173)
Q Consensus 140 l~~~l~~l~~~l~~I~~~q~y~r 162 (173)
+...+..|.+++.+++++..+++
T Consensus 5 LVDtVYalkDev~eLk~e~k~~k 27 (61)
T 3l4f_A 5 LVDTVYALKDEVQELRQDNKKMK 27 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555666666666555554
No 79
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=28.45 E-value=64 Score=16.30 Aligned_cols=25 Identities=8% Similarity=0.038 Sum_probs=14.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Q 030705 137 VDVMELELKKLYDTVSSIHQEMFYL 161 (173)
Q Consensus 137 l~~l~~~l~~l~~~l~~I~~~q~y~ 161 (173)
|+.+|.+++.|...-....++-.-+
T Consensus 2 MnQLEdKVEell~~~~~le~EV~Rl 26 (33)
T 2wq1_A 2 MKQLEDKIEENTSKIYHNTNEIARN 26 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHH
Confidence 4566666666666665555554433
No 80
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=27.60 E-value=52 Score=19.17 Aligned_cols=31 Identities=16% Similarity=0.233 Sum_probs=22.2
Q ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 030705 133 KKGSVDVMELELKKLYDTVSSIHQEMFYLRE 163 (173)
Q Consensus 133 ~~~~l~~l~~~l~~l~~~l~~I~~~q~y~r~ 163 (173)
+.++++.++.++..|...-..+..+...+++
T Consensus 28 K~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~ 58 (63)
T 2dgc_A 28 KLQRMKQLEDKVEELLSKNYHLENEVARLKK 58 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577888888888887777777666665543
No 81
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=27.51 E-value=68 Score=16.32 Aligned_cols=25 Identities=8% Similarity=0.097 Sum_probs=15.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Q 030705 137 VDVMELELKKLYDTVSSIHQEMFYL 161 (173)
Q Consensus 137 l~~l~~~l~~l~~~l~~I~~~q~y~ 161 (173)
|+.++.+++.|........++-.-+
T Consensus 3 MnQledKvEel~~~~~~l~nEv~Rl 27 (34)
T 2r2v_A 3 LKQVADKLEEVASKLYHNANELARV 27 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHHH
Confidence 5566667766666666665555443
No 82
>2yrp_A Nuclear factor of activated T-cells, cytoplasmic 4; beta-sandwich, immunoglobulin-like fold, TIG domain, IPT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.40 E-value=1.1e+02 Score=20.21 Aligned_cols=54 Identities=11% Similarity=0.078 Sum_probs=34.5
Q ss_pred ceEEEEEeCCCCCeEEeeeccccceEEEEeeccCceeEEEEecCCC---CCceEEEEEEEeec
Q 030705 63 HKLTVRVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAVDHS---PQTTVTIDFDWRTG 122 (173)
Q Consensus 63 ~~v~v~I~dp~g~~l~~~~~~~~g~f~f~~~~~G~y~iCf~n~~~~---~~~~~~V~f~~~~g 122 (173)
..|.+.=++|+|+.+|. .+|+|. ....-.|.+||.-+... -..+..|.|-+..|
T Consensus 38 ~kV~F~E~~~dG~~~WE----~~a~f~--~d~~~q~aivf~tPpY~~~~I~~pV~V~~~l~~~ 94 (114)
T 2yrp_A 38 SKVVFIERGPDGKLQWE----EEATVN--RLQSNEVTLTLTVPEYSNKRVSRPVQVYFYVSNG 94 (114)
T ss_dssp CEEEEECBCTTSCBCCC----CBCCBC--TTTCBTTEEEEECCCCSCCSCSSCEEEEEEEECS
T ss_pred CEEEEEEECCCCCcceE----EeeEEC--hHHcccccEEEecCCCCCCccCCCeEEEEEECCC
Confidence 45555556788888774 445554 34445688999988765 13467777777444
No 83
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=25.99 E-value=73 Score=16.20 Aligned_cols=27 Identities=15% Similarity=0.261 Sum_probs=15.2
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHH
Q 030705 136 SVDVMELELKKLYDTVSSIHQEMFYLR 162 (173)
Q Consensus 136 ~l~~l~~~l~~l~~~l~~I~~~q~y~r 162 (173)
.|+.++.+++.|...=..+.++-.-++
T Consensus 2 RMnQLEdKvEeLl~~~~~L~~EV~RLk 28 (34)
T 2bni_A 2 RMKQIEDKLEEILSKGHHICNELARIK 28 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHccHHHHHHHHHHH
Confidence 355666666666666555555554443
No 84
>2ovc_A Potassium voltage-gated channel subfamily KQT MEM; potassium channel, ION channel assemb coiled-coil, tetramer, transport protein; 2.07A {Homo sapiens}
Probab=25.77 E-value=64 Score=16.37 Aligned_cols=18 Identities=11% Similarity=0.198 Sum_probs=9.1
Q ss_pred cchHHHHHHHHHHHHHHH
Q 030705 137 VDVMELELKKLYDTVSSI 154 (173)
Q Consensus 137 l~~l~~~l~~l~~~l~~I 154 (173)
+..+|.++..+..+|+.|
T Consensus 12 l~kVE~qv~~md~KLd~l 29 (33)
T 2ovc_A 12 VVKVEKQVQSIEHKLDLL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344555555555555544
No 85
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=25.64 E-value=1e+02 Score=19.50 Aligned_cols=30 Identities=0% Similarity=0.038 Sum_probs=13.2
Q ss_pred EEeCCCCCeEEeeecc-ccceEEEEeeccCc
Q 030705 68 RVTSAYGNSYHYADRV-DSGQFAFTAAEAGD 97 (173)
Q Consensus 68 ~I~dp~g~~l~~~~~~-~~g~f~f~~~~~G~ 97 (173)
.++|+.|.++++.... ..|.|.+..+.+|.
T Consensus 64 Vl~~~~~~~~W~S~t~~~~g~~~l~l~~dGn 94 (110)
T 3a0c_A 64 VIYDQSNRVIWQTKTNGKEDHYVLVLQQDRN 94 (110)
T ss_dssp EEECTTCCEEEECCCCCSSSCCEEEECTTSC
T ss_pred EEECCCCcEEEecCCCCCCCCEEEEEeCCcc
Confidence 4455555555543211 12344444444443
No 86
>2q0z_X Protein Pro2281; SEC63, SEC, NESG, HR1979, structural genomics, translocase, northeast structural genomics consortium, PSI-2; 2.00A {Homo sapiens} SCOP: a.289.1.1 b.1.18.22
Probab=25.60 E-value=2.3e+02 Score=21.86 Aligned_cols=60 Identities=15% Similarity=0.082 Sum_probs=35.5
Q ss_pred CceEEEEEeCCCCCeEEeeec-----cccceEEEEeeccCceeEEEE--ecCCCCCceEEEEEEEeec
Q 030705 62 SHKLTVRVTSAYGNSYHYADR-----VDSGQFAFTAAEAGDYMACFW--AVDHSPQTTVTIDFDWRTG 122 (173)
Q Consensus 62 ~~~v~v~I~dp~g~~l~~~~~-----~~~g~f~f~~~~~G~y~iCf~--n~~~~~~~~~~V~f~~~~g 122 (173)
...--+.|.|+.++.++.-+. ...-+..|++...|.|.+.+. +..+- +....+.+.+++.
T Consensus 264 ~e~wwi~v~d~~~~~ll~~~r~~l~~~~~~~l~f~~P~~g~~~~~v~~vSD~yl-G~D~~~~i~~~v~ 330 (339)
T 2q0z_X 264 EEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATGAHNYTLYFMSDAYM-GCDQEYKFSVDVK 330 (339)
T ss_dssp CCCEEEEEEETTTTEEEEEEEECCSSEEEEEEEEECCSSEEEEEEEEEEESSCS-SCCEEEEEEEEEB
T ss_pred CCcEEEEEEECCCCEEEEEEEEecccceEEEEEEECCCCCCeeEEEEEEccccc-CcceEEEEEEEEe
Confidence 456778888998776543221 223468899887787666444 44443 4445555555543
No 87
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=23.52 E-value=52 Score=19.74 Aligned_cols=37 Identities=22% Similarity=0.167 Sum_probs=25.8
Q ss_pred hccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 030705 132 AKKGSVDVMELELKKLYDTVSSIHQEMFYLRERRNAG 168 (173)
Q Consensus 132 a~~~~l~~l~~~l~~l~~~l~~I~~~q~y~r~re~~~ 168 (173)
.+..++..++..+..|......+..+-..++..-..+
T Consensus 26 RK~~~i~~LE~~v~~le~~~~~l~~en~~Lr~~i~~L 62 (70)
T 1gd2_E 26 RKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQL 62 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3557888888888888887777766666666544433
No 88
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=23.10 E-value=56 Score=18.44 Aligned_cols=30 Identities=23% Similarity=0.222 Sum_probs=19.2
Q ss_pred hccCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 030705 132 AKKGSVDVMELELKKLYDTVSSIHQEMFYL 161 (173)
Q Consensus 132 a~~~~l~~l~~~l~~l~~~l~~I~~~q~y~ 161 (173)
.++.+++.++..+..|...-..+..+..-+
T Consensus 19 RKk~~~~~LE~~v~~L~~eN~~L~~~~~~L 48 (55)
T 1dh3_A 19 KKKEYVKSLENRVAVLENQNKTLIEELKAL 48 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677777777777776666665555443
No 89
>2lif_A Core protein P21; signal peptide, E1 envelope protein, transmemb membrane protein, viral protein; NMR {Hepatitis c virus jfh-1}
Probab=28.72 E-value=18 Score=17.61 Aligned_cols=17 Identities=6% Similarity=0.229 Sum_probs=8.2
Q ss_pred HHHHHHHHHHhhcceeE
Q 030705 6 LTLVLVIGILSSTSQSL 22 (173)
Q Consensus 6 ~~~~~~l~ll~~~~~al 22 (173)
++++.+|.++..++.++
T Consensus 8 iFlLaLlscLt~Pasa~ 24 (27)
T 2lif_A 8 IFLLALLSCITVPVSAA 24 (27)
Confidence 34445555554555443
No 90
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=22.58 E-value=2.5e+02 Score=21.15 Aligned_cols=45 Identities=18% Similarity=0.197 Sum_probs=28.7
Q ss_pred CceEEEEEeCCCCCeEEeeeccccc--eEEEEeeccCceeEEEEecCC
Q 030705 62 SHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVDH 107 (173)
Q Consensus 62 ~~~v~v~I~dp~g~~l~~~~~~~~g--~f~f~~~~~G~y~iCf~n~~~ 107 (173)
...+.+.|.+|..-.+.- .+...| ..+|++...|.|.+-+.-...
T Consensus 42 ~~~~~v~i~gp~~~~~~~-~d~~dG~y~v~y~p~~~G~~~i~v~~~~~ 88 (311)
T 1wlh_A 42 GDGFVVTIEGPAPVDPVM-VDNGDGTYDVEFEPKEAGDYVINLTLDGD 88 (311)
T ss_dssp CCCEEEEEESSSCCCCBC-CCCSSSEEEEEECCCSCSEEEEEEEESSS
T ss_pred CCeEEEEEECCCccEEEE-EECCCCEEEEEEEccCccceEEEEEECCE
Confidence 356888888886533211 122233 567888889999987775543
No 91
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=22.54 E-value=87 Score=15.82 Aligned_cols=26 Identities=15% Similarity=0.285 Sum_probs=15.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH
Q 030705 137 VDVMELELKKLYDTVSSIHQEMFYLR 162 (173)
Q Consensus 137 l~~l~~~l~~l~~~l~~I~~~q~y~r 162 (173)
|+.+|.++..|...-..+.++-.-++
T Consensus 2 M~QLE~kVEeLl~~n~~Le~EV~RLk 27 (33)
T 3m48_A 2 MAQLEAKVEELLSKNWNLENEVARLK 27 (33)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 56677777777666666666554443
No 92
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=22.41 E-value=29 Score=20.26 Aligned_cols=23 Identities=17% Similarity=0.372 Sum_probs=14.2
Q ss_pred cCCcchHHHHHHHHHHHHHHHHH
Q 030705 134 KGSVDVMELELKKLYDTVSSIHQ 156 (173)
Q Consensus 134 ~~~l~~l~~~l~~l~~~l~~I~~ 156 (173)
...++.|+.+|..|+..|..+..
T Consensus 48 ~~~~~~Le~ri~~Le~~l~~l~~ 70 (72)
T 2er8_A 48 RARNEAIEKRFKELTRTLTNLTS 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 34566677777777777765543
No 93
>1nqj_A Class 1 collagenase; beta sandwich, metalloprotease, collagen-binding domain, lithium, chlorine, hydrolase; 1.00A {Clostridium histolyticum} SCOP: b.23.2.1 PDB: 2o8o_A 1nqd_A
Probab=22.28 E-value=1.7e+02 Score=19.21 Aligned_cols=65 Identities=11% Similarity=0.123 Sum_probs=41.6
Q ss_pred CccceeeeeccCCcEEEEEEEEEcCCCCCCCCCCceEEEEEeCCCC--CeEEe-e-ecc-ccceEEEEeeccCceeEEEE
Q 030705 29 AHTKCIAEDIKSNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYG--NSYHY-A-DRV-DSGQFAFTAAEAGDYMACFW 103 (173)
Q Consensus 29 ~~~~Cf~e~~~~~~~v~~~y~v~~~~~~~~~~~~~~v~v~I~dp~g--~~l~~-~-~~~-~~g~f~f~~~~~G~y~iCf~ 103 (173)
.....|.-++++...|.+++.-.. +.++...+++.++ +.+.. . .+. ..| +|.+. +|.|-+.++
T Consensus 38 D~~D~y~f~v~~~g~v~I~l~~~~---------~~~~~w~ly~~~dl~nyv~y~~~~gn~~~~--~~~~~-pGkYYl~Vy 105 (119)
T 1nqj_A 38 DSRDYYSFEVKEEGEVNIELDKKD---------EFGVTWTLHPESNINDRITYGQVDGNKVSN--KVKLR-PGKYYLLVY 105 (119)
T ss_dssp CCEEEEEEEESSCEEEEEEEEESS---------SSEEEEEEEECC----CCEECEEETTEEEE--EEEEC-SEEEEEEEE
T ss_pred CCcEEEEEECCCCCeEEEEEEeCC---------CCCEEEEEEccCCCccceEEeecCCCcEEE--EEEcC-CcEEEEEEE
Confidence 347888888888888888854432 3478888888877 43432 1 111 134 45554 899999998
Q ss_pred ec
Q 030705 104 AV 105 (173)
Q Consensus 104 n~ 105 (173)
.-
T Consensus 106 ~y 107 (119)
T 1nqj_A 106 KY 107 (119)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 94
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=22.27 E-value=76 Score=21.75 Aligned_cols=17 Identities=29% Similarity=0.634 Sum_probs=13.1
Q ss_pred cceEEEEeeccCceeE-EE
Q 030705 85 SGQFAFTAAEAGDYMA-CF 102 (173)
Q Consensus 85 ~g~f~f~~~~~G~y~i-Cf 102 (173)
...+.|++ ..|.|.+ |-
T Consensus 121 t~t~tft~-~pGtY~y~C~ 138 (154)
T 2cal_A 121 YTDFTWHP-TAGTYYYVCQ 138 (154)
T ss_dssp EEEEEECC-CSEEEEEECC
T ss_pred EEEEEEEE-CCceEEEECC
Confidence 45678888 9999976 84
No 95
>1hbw_A Regulatory protein GAL4; transcriptional activator, galactose and melibiose metabolism, dimerization domain, coiled-coil dimeric; NMR {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=22.22 E-value=49 Score=18.90 Aligned_cols=18 Identities=17% Similarity=0.285 Sum_probs=14.9
Q ss_pred cCCcchHHHHHHHHHHHH
Q 030705 134 KGSVDVMELELKKLYDTV 151 (173)
Q Consensus 134 ~~~l~~l~~~l~~l~~~l 151 (173)
..|+..+|..+.+|++.+
T Consensus 2 RAHLTeVEnRl~qLE~ll 19 (57)
T 1hbw_A 2 RAHLTEVESRLERLEQLF 19 (57)
T ss_dssp CCCCHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHHHHHH
Confidence 468899999999998765
No 96
>2l3b_A Conserved protein found in conjugate transposon; beta, structural genomics, PSI-biology; NMR {Bacteroides thetaiotaomicron}
Probab=21.64 E-value=1.5e+02 Score=20.02 Aligned_cols=10 Identities=10% Similarity=0.381 Sum_probs=4.9
Q ss_pred ceEEEEEEEe
Q 030705 111 TTVTIDFDWR 120 (173)
Q Consensus 111 ~~~~V~f~~~ 120 (173)
....++|+|.
T Consensus 105 q~~ql~f~Fn 114 (130)
T 2l3b_A 105 QLQQLTFSFN 114 (130)
T ss_dssp CEEEEEEEES
T ss_pred CEEEEEEEcc
Confidence 4455555553
No 97
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=21.60 E-value=47 Score=22.19 Aligned_cols=23 Identities=13% Similarity=0.362 Sum_probs=16.3
Q ss_pred ccceEEEEee---ccCceeE-EEEecC
Q 030705 84 DSGQFAFTAA---EAGDYMA-CFWAVD 106 (173)
Q Consensus 84 ~~g~f~f~~~---~~G~y~i-Cf~n~~ 106 (173)
.++.++|++. ..|.|.+ |-...+
T Consensus 91 et~svtf~~~~~~~~G~Y~f~C~~pgH 117 (129)
T 1cuo_A 91 EKTSVKFKVSALSKDEAYTYFCSYPGH 117 (129)
T ss_dssp CEEEEEEEGGGCCTTSCEEEECCSTTC
T ss_pred CEEEEEEeccccCCCceEEEEeCCCCc
Confidence 3567888876 7899977 854434
No 98
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A*
Probab=21.54 E-value=1.6e+02 Score=18.66 Aligned_cols=35 Identities=11% Similarity=0.250 Sum_probs=21.6
Q ss_pred eCCCCCeEEeeeccccceEEEEeeccCceeEEEEe
Q 030705 70 TSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWA 104 (173)
Q Consensus 70 ~dp~g~~l~~~~~~~~g~f~f~~~~~G~y~iCf~n 104 (173)
.++.|++.....+.....+.++...++.|-+|+-.
T Consensus 81 ~~~~G~P~l~~~~~~~~~~~~SiSH~~~~a~A~v~ 115 (121)
T 1f7l_A 81 KDQNGKPYIICTKLSPAAVHVSITHTKEYAAAQVV 115 (121)
T ss_dssp ECTTSCEEEEETTTEEEEEEEEEEECSSEEEEEEE
T ss_pred ECCCCCcEEEECccccCcEEEEEeCCCCcEEEEEE
Confidence 46777766543322224567777778888777643
No 99
>1yhn_B RILP, RAB interacting lysosomal protein; protein transport; HET: GTP; 3.00A {Homo sapiens} SCOP: h.1.34.1
Probab=21.09 E-value=1.3e+02 Score=17.47 Aligned_cols=31 Identities=16% Similarity=0.233 Sum_probs=26.4
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030705 135 GSVDVMELELKKLYDTVSSIHQEMFYLRERR 165 (173)
Q Consensus 135 ~~l~~l~~~l~~l~~~l~~I~~~q~y~r~re 165 (173)
+.+..+-.+=++|..++-.+++|..|++...
T Consensus 3 ~Elr~iLqERNELKa~vf~lqeEL~yY~~e~ 33 (65)
T 1yhn_B 3 EEFEQILQERNELKAKVFLLKEELAYFQREL 33 (65)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4566777788999999999999999999766
No 100
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=20.63 E-value=1.9e+02 Score=19.05 Aligned_cols=53 Identities=11% Similarity=0.144 Sum_probs=35.3
Q ss_pred EEEEEEcCCCCCCCCCCceEEEEEeCCCCCeEEeeec-----------------c-ccceEEEEeeccCceeEEEEec
Q 030705 46 GKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADR-----------------V-DSGQFAFTAAEAGDYMACFWAV 105 (173)
Q Consensus 46 ~~y~v~~~~~~~~~~~~~~v~v~I~dp~g~~l~~~~~-----------------~-~~g~f~f~~~~~G~y~iCf~n~ 105 (173)
+.|++.... +....+.++.++|++|.+.+. . ...+|.......|.|.|=+...
T Consensus 3 g~FEi~~~~-------~g~~rFrLka~NgeiI~sSe~Y~sk~~a~~gI~sVk~na~~~~~fe~~~~~~gk~yF~Lka~ 73 (118)
T 2k49_A 3 GWYELSKSS-------NDQFKFVLKAGNGEVILTSELYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLKAA 73 (118)
T ss_dssp CEEEEEECT-------TSCEEEEEECSSSCEEEECCCBSSHHHHHHHHHHHHHHTTCGGGEEEEEETTTEEEEEEECT
T ss_pred ceEEEEEcC-------CCCEEEEEEECCCCEEEECCCcCCHHHHHHHHHHHHHhCcccceEEEEEccCCCEEEEEEcC
Confidence 467776543 447889999999999875321 1 1356777777778777655543
No 101
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=20.33 E-value=99 Score=24.34 Aligned_cols=38 Identities=13% Similarity=0.165 Sum_probs=27.5
Q ss_pred eEEEEEeCCCCCeEE------eeeccccceEEEEeeccCceeEE
Q 030705 64 KLTVRVTSAYGNSYH------YADRVDSGQFAFTAAEAGDYMAC 101 (173)
Q Consensus 64 ~v~v~I~dp~g~~l~------~~~~~~~g~f~f~~~~~G~y~iC 101 (173)
+..|.|++.+|..+. .......|.+.|.--..|.|.+=
T Consensus 268 GA~F~l~~~~g~~~~~~~~~~~~~td~~G~~~~~~L~~G~Y~l~ 311 (355)
T 3kpt_A 268 GAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWSNIPYGDYQIF 311 (355)
T ss_dssp CCEEEEEETTSCBCBSSSSBCEEECCTTSEEEEEEEESSEEEEE
T ss_pred CCEEEEEeCCCCEEEeccceEEEEECCCCeEEECcCCCceEEEE
Confidence 677778888888664 33334578888888888888873
Done!