Query 030706
Match_columns 173
No_of_seqs 315 out of 1904
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 03:22:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030706.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030706hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1205 Predicted dehydrogenas 99.9 1.7E-21 3.7E-26 151.8 11.6 96 76-171 8-103 (282)
2 COG0300 DltE Short-chain dehyd 99.9 5.2E-21 1.1E-25 148.0 13.0 94 77-171 3-96 (265)
3 COG4221 Short-chain alcohol de 99.9 5.7E-21 1.2E-25 144.7 12.1 91 78-172 4-94 (246)
4 KOG1201 Hydroxysteroid 17-beta 99.8 7.5E-20 1.6E-24 142.0 12.0 96 74-172 32-127 (300)
5 KOG1208 Dehydrogenases with di 99.8 1E-19 2.2E-24 144.9 12.8 101 73-173 28-128 (314)
6 PRK05854 short chain dehydroge 99.8 2E-19 4.4E-24 143.6 14.3 96 76-171 10-105 (313)
7 COG3967 DltE Short-chain dehyd 99.8 1.8E-19 3.9E-24 132.9 9.6 90 77-172 2-91 (245)
8 KOG0725 Reductases with broad 99.8 1E-18 2.2E-23 136.8 13.8 97 76-172 4-102 (270)
9 PRK07062 short chain dehydroge 99.8 1.7E-18 3.8E-23 134.5 14.2 95 77-171 5-99 (265)
10 PRK06720 hypothetical protein; 99.8 6E-18 1.3E-22 124.0 13.7 93 77-171 13-105 (169)
11 PRK08339 short chain dehydroge 99.8 4.5E-18 9.8E-23 132.5 13.5 93 77-171 5-97 (263)
12 PRK07063 short chain dehydroge 99.8 5.3E-18 1.1E-22 131.4 13.8 94 78-171 5-98 (260)
13 PRK07478 short chain dehydroge 99.8 4.9E-18 1.1E-22 131.2 13.5 93 77-171 3-95 (254)
14 PRK06079 enoyl-(acyl carrier p 99.8 2.4E-18 5.2E-23 133.2 11.8 91 76-171 3-95 (252)
15 PRK06197 short chain dehydroge 99.8 6E-18 1.3E-22 134.4 14.3 96 76-171 12-107 (306)
16 PRK08862 short chain dehydroge 99.8 4.9E-18 1.1E-22 129.9 13.1 92 77-170 2-94 (227)
17 KOG4169 15-hydroxyprostaglandi 99.8 1.7E-18 3.7E-23 129.5 10.1 95 77-172 2-96 (261)
18 PRK05867 short chain dehydroge 99.8 6.4E-18 1.4E-22 130.6 13.5 93 77-171 6-98 (253)
19 PRK05876 short chain dehydroge 99.8 6.6E-18 1.4E-22 132.5 13.4 92 78-171 4-95 (275)
20 PRK06505 enoyl-(acyl carrier p 99.8 5E-18 1.1E-22 133.0 12.6 93 76-171 3-97 (271)
21 PRK06139 short chain dehydroge 99.8 8E-18 1.7E-22 135.4 13.9 93 77-171 4-96 (330)
22 PRK05866 short chain dehydroge 99.8 1.2E-17 2.6E-22 132.2 14.6 95 75-171 35-129 (293)
23 PRK08416 7-alpha-hydroxysteroi 99.8 7.9E-18 1.7E-22 130.7 13.1 93 77-170 5-98 (260)
24 PRK07533 enoyl-(acyl carrier p 99.8 8.8E-18 1.9E-22 130.5 13.2 93 76-171 6-100 (258)
25 PRK08589 short chain dehydroge 99.8 1E-17 2.2E-22 131.1 13.5 91 78-171 4-94 (272)
26 PRK07984 enoyl-(acyl carrier p 99.8 6.8E-18 1.5E-22 131.7 12.5 91 78-171 4-96 (262)
27 PRK07791 short chain dehydroge 99.8 8.9E-18 1.9E-22 132.5 13.1 93 77-171 3-104 (286)
28 PRK08303 short chain dehydroge 99.8 1.2E-17 2.6E-22 133.0 12.9 91 77-169 5-106 (305)
29 PRK08690 enoyl-(acyl carrier p 99.8 1.2E-17 2.5E-22 130.1 12.4 91 78-171 4-96 (261)
30 PRK08415 enoyl-(acyl carrier p 99.8 1.7E-17 3.8E-22 130.2 13.1 91 78-171 3-95 (274)
31 PLN02253 xanthoxin dehydrogena 99.8 2.9E-17 6.3E-22 128.7 14.3 93 76-171 14-106 (280)
32 PRK07109 short chain dehydroge 99.8 2.6E-17 5.7E-22 132.6 14.2 93 77-171 5-97 (334)
33 PRK08594 enoyl-(acyl carrier p 99.8 1.6E-17 3.4E-22 129.2 12.4 94 77-171 4-99 (257)
34 PRK12481 2-deoxy-D-gluconate 3 99.8 2.1E-17 4.5E-22 127.9 13.0 91 77-171 5-95 (251)
35 PRK09186 flagellin modificatio 99.8 2.4E-17 5.2E-22 127.2 13.1 94 77-170 1-94 (256)
36 PRK05872 short chain dehydroge 99.7 3.1E-17 6.6E-22 130.0 13.5 92 77-171 6-97 (296)
37 PRK08265 short chain dehydroge 99.7 3.4E-17 7.4E-22 127.3 13.5 89 78-171 4-92 (261)
38 PRK06603 enoyl-(acyl carrier p 99.7 2.4E-17 5.3E-22 128.2 12.6 91 78-171 6-98 (260)
39 PRK05599 hypothetical protein; 99.7 2.5E-17 5.4E-22 127.1 12.5 89 81-171 1-89 (246)
40 PRK06114 short chain dehydroge 99.7 4.7E-17 1E-21 125.9 13.8 93 77-171 5-98 (254)
41 PRK07792 fabG 3-ketoacyl-(acyl 99.7 4.1E-17 8.9E-22 129.9 13.7 94 76-172 8-102 (306)
42 PRK06194 hypothetical protein; 99.7 4.1E-17 8.9E-22 128.2 13.4 92 78-171 4-95 (287)
43 PRK08251 short chain dehydroge 99.7 5.6E-17 1.2E-21 124.7 13.6 92 80-171 2-93 (248)
44 PRK07890 short chain dehydroge 99.7 4.7E-17 1E-21 125.7 13.3 92 78-171 3-94 (258)
45 PRK08085 gluconate 5-dehydroge 99.7 5.8E-17 1.2E-21 125.2 13.4 93 77-171 6-98 (254)
46 PRK09242 tropinone reductase; 99.7 8.1E-17 1.7E-21 124.6 14.1 94 77-170 6-99 (257)
47 PRK07831 short chain dehydroge 99.7 1.1E-16 2.4E-21 124.2 14.7 96 76-171 13-109 (262)
48 PRK08159 enoyl-(acyl carrier p 99.7 4.2E-17 9.1E-22 127.8 12.4 91 78-171 8-100 (272)
49 PF00106 adh_short: short chai 99.7 4.3E-17 9.3E-22 118.1 11.6 89 81-171 1-92 (167)
50 PRK06172 short chain dehydroge 99.7 8.3E-17 1.8E-21 124.2 13.7 93 77-171 4-96 (253)
51 PRK06200 2,3-dihydroxy-2,3-dih 99.7 5.6E-17 1.2E-21 126.0 12.8 89 77-170 3-91 (263)
52 PRK05717 oxidoreductase; Valid 99.7 6.2E-17 1.3E-21 125.2 12.9 92 75-171 5-96 (255)
53 PRK07097 gluconate 5-dehydroge 99.7 8.3E-17 1.8E-21 125.2 13.7 94 76-171 6-99 (265)
54 PRK07453 protochlorophyllide o 99.7 5.9E-17 1.3E-21 129.6 13.1 92 78-171 4-95 (322)
55 PRK06128 oxidoreductase; Provi 99.7 3.1E-16 6.6E-21 124.4 16.7 92 77-170 52-145 (300)
56 PRK06124 gluconate 5-dehydroge 99.7 1.3E-16 2.8E-21 123.3 14.0 95 75-171 6-100 (256)
57 KOG1200 Mitochondrial/plastidi 99.7 3.4E-17 7.4E-22 120.1 10.1 93 77-172 11-103 (256)
58 PRK07370 enoyl-(acyl carrier p 99.7 6.2E-17 1.3E-21 125.8 12.2 92 78-171 4-99 (258)
59 PRK07523 gluconate 5-dehydroge 99.7 1.1E-16 2.4E-21 123.7 13.5 92 78-171 8-99 (255)
60 PRK08277 D-mannonate oxidoredu 99.7 9.5E-17 2.1E-21 125.6 13.3 92 77-170 7-98 (278)
61 PRK07889 enoyl-(acyl carrier p 99.7 6E-17 1.3E-21 125.7 11.9 89 78-171 5-97 (256)
62 TIGR03325 BphB_TodD cis-2,3-di 99.7 8.7E-17 1.9E-21 124.9 12.8 88 78-170 3-90 (262)
63 PRK08643 acetoin reductase; Va 99.7 1.1E-16 2.3E-21 123.8 13.2 90 80-171 2-91 (256)
64 PRK07035 short chain dehydroge 99.7 1.3E-16 2.8E-21 123.1 13.5 92 77-170 5-96 (252)
65 PRK07814 short chain dehydroge 99.7 1.4E-16 3E-21 123.9 13.7 92 78-171 8-99 (263)
66 PRK06196 oxidoreductase; Provi 99.7 9.2E-17 2E-21 128.2 12.8 89 77-171 23-111 (315)
67 PRK07825 short chain dehydroge 99.7 1.1E-16 2.3E-21 125.0 12.6 88 78-171 3-90 (273)
68 PRK07774 short chain dehydroge 99.7 1.7E-16 3.6E-21 122.1 13.4 93 77-171 3-95 (250)
69 PRK06935 2-deoxy-D-gluconate 3 99.7 1.7E-16 3.6E-21 123.0 13.4 92 77-171 12-103 (258)
70 PRK08628 short chain dehydroge 99.7 1.5E-16 3.2E-21 123.1 13.0 93 76-171 3-95 (258)
71 PRK12384 sorbitol-6-phosphate 99.7 2.1E-16 4.5E-21 122.3 13.8 92 80-171 2-93 (259)
72 TIGR01289 LPOR light-dependent 99.7 1.1E-16 2.4E-21 127.9 12.5 91 79-171 2-93 (314)
73 PRK12823 benD 1,6-dihydroxycyc 99.7 1.7E-16 3.6E-21 123.0 13.1 90 78-170 6-95 (260)
74 PRK08278 short chain dehydroge 99.7 2.1E-16 4.6E-21 123.7 13.5 93 77-171 3-102 (273)
75 PRK08340 glucose-1-dehydrogena 99.7 1.4E-16 3E-21 123.6 12.2 86 82-170 2-87 (259)
76 PRK07024 short chain dehydroge 99.7 1.4E-16 2.9E-21 123.5 12.1 89 80-171 2-90 (257)
77 PRK06997 enoyl-(acyl carrier p 99.7 1.3E-16 2.8E-21 124.2 12.0 91 78-171 4-96 (260)
78 PRK07677 short chain dehydroge 99.7 2.1E-16 4.7E-21 122.0 13.0 89 80-170 1-89 (252)
79 PRK06138 short chain dehydroge 99.7 2.8E-16 6.1E-21 120.9 13.5 91 78-171 3-93 (252)
80 PRK07576 short chain dehydroge 99.7 3.6E-16 7.9E-21 121.8 13.9 92 77-170 6-97 (264)
81 PRK13394 3-hydroxybutyrate deh 99.7 3.3E-16 7.2E-21 121.1 13.4 92 78-171 5-96 (262)
82 TIGR01832 kduD 2-deoxy-D-gluco 99.7 3.3E-16 7.2E-21 120.4 13.2 90 78-171 3-92 (248)
83 PRK07231 fabG 3-ketoacyl-(acyl 99.7 3.4E-16 7.5E-21 120.2 13.2 90 78-170 3-92 (251)
84 PRK06113 7-alpha-hydroxysteroi 99.7 4.6E-16 9.9E-21 120.3 13.8 92 78-171 9-100 (255)
85 PRK12429 3-hydroxybutyrate deh 99.7 4E-16 8.8E-21 120.3 13.5 93 77-171 1-93 (258)
86 PRK12939 short chain dehydroge 99.7 5.4E-16 1.2E-20 119.1 13.9 93 77-171 4-96 (250)
87 PRK08993 2-deoxy-D-gluconate 3 99.7 3.7E-16 8E-21 120.9 13.0 91 77-171 7-97 (253)
88 PRK08063 enoyl-(acyl carrier p 99.7 3.7E-16 8E-21 120.2 12.9 92 78-171 2-94 (250)
89 PRK05875 short chain dehydroge 99.7 6.1E-16 1.3E-20 120.8 13.6 93 78-170 5-97 (276)
90 PRK08213 gluconate 5-dehydroge 99.7 5.9E-16 1.3E-20 119.9 13.3 92 77-170 9-100 (259)
91 PRK06701 short chain dehydroge 99.7 1.5E-15 3.3E-20 120.0 15.8 93 76-170 42-135 (290)
92 PRK07856 short chain dehydroge 99.7 4.1E-16 8.9E-21 120.4 12.3 85 77-171 3-87 (252)
93 PRK12937 short chain dehydroge 99.7 8.4E-16 1.8E-20 117.8 13.8 93 77-171 2-95 (245)
94 PRK07454 short chain dehydroge 99.7 6.8E-16 1.5E-20 118.3 13.1 91 79-171 5-95 (241)
95 PRK07067 sorbitol dehydrogenas 99.7 5.1E-16 1.1E-20 120.1 12.5 89 78-171 4-92 (257)
96 PRK08226 short chain dehydroge 99.7 7.7E-16 1.7E-20 119.4 13.5 91 78-171 4-94 (263)
97 PRK08936 glucose-1-dehydrogena 99.7 8.7E-16 1.9E-20 119.2 13.8 93 78-172 5-98 (261)
98 PRK06398 aldose dehydrogenase; 99.7 3.3E-16 7.1E-21 121.6 11.4 81 78-171 4-84 (258)
99 PRK06914 short chain dehydroge 99.7 5.7E-16 1.2E-20 121.2 12.8 92 79-171 2-93 (280)
100 PRK06484 short chain dehydroge 99.7 9.6E-16 2.1E-20 129.8 14.8 89 77-170 266-354 (520)
101 PRK07904 short chain dehydroge 99.7 6.3E-16 1.4E-20 119.9 12.5 92 78-171 6-99 (253)
102 PRK07666 fabG 3-ketoacyl-(acyl 99.7 1.1E-15 2.3E-20 117.0 13.6 92 78-171 5-96 (239)
103 PRK12938 acetyacetyl-CoA reduc 99.7 8.3E-16 1.8E-20 118.0 12.9 92 78-171 1-93 (246)
104 PRK06949 short chain dehydroge 99.7 1.5E-15 3.2E-20 117.4 14.1 92 78-171 7-98 (258)
105 PRK09134 short chain dehydroge 99.7 1.4E-15 3E-20 117.8 13.8 92 78-171 7-99 (258)
106 PRK12743 oxidoreductase; Provi 99.7 1.1E-15 2.4E-20 118.4 13.1 90 80-171 2-92 (256)
107 PRK09072 short chain dehydroge 99.7 1.2E-15 2.6E-20 118.5 13.3 90 78-171 3-92 (263)
108 TIGR02632 RhaD_aldol-ADH rhamn 99.7 1.1E-15 2.4E-20 133.3 14.4 95 77-171 411-505 (676)
109 PRK08217 fabG 3-ketoacyl-(acyl 99.7 1.4E-15 3E-20 116.9 13.4 92 78-171 3-94 (253)
110 PRK07985 oxidoreductase; Provi 99.7 9.8E-16 2.1E-20 121.3 12.8 92 77-170 46-139 (294)
111 PRK05855 short chain dehydroge 99.7 9.5E-16 2E-20 130.6 13.5 93 77-171 312-404 (582)
112 PRK06463 fabG 3-ketoacyl-(acyl 99.7 1E-15 2.2E-20 118.4 12.5 88 77-171 4-91 (255)
113 PRK06182 short chain dehydroge 99.7 7.6E-16 1.6E-20 120.3 11.9 85 79-171 2-86 (273)
114 PRK06179 short chain dehydroge 99.7 5.5E-16 1.2E-20 120.8 11.0 84 78-171 2-85 (270)
115 PRK06500 short chain dehydroge 99.7 1.5E-15 3.3E-20 116.6 13.2 89 78-171 4-92 (249)
116 PRK12747 short chain dehydroge 99.7 1.3E-15 2.9E-20 117.4 13.0 93 77-171 1-100 (252)
117 PRK09135 pteridine reductase; 99.7 2.1E-15 4.6E-20 115.6 13.8 93 78-171 4-97 (249)
118 PLN02780 ketoreductase/ oxidor 99.7 9.1E-16 2E-20 123.0 12.2 92 78-171 51-144 (320)
119 PLN02730 enoyl-[acyl-carrier-p 99.7 5.7E-16 1.2E-20 123.2 10.8 94 76-170 5-131 (303)
120 PRK05650 short chain dehydroge 99.7 1.4E-15 2.9E-20 118.7 12.8 89 81-171 1-89 (270)
121 PRK07832 short chain dehydroge 99.7 1.5E-15 3.2E-20 118.6 12.8 89 81-170 1-89 (272)
122 PRK06484 short chain dehydroge 99.7 1.1E-15 2.3E-20 129.5 12.9 88 78-170 3-90 (520)
123 PRK06940 short chain dehydroge 99.7 1.4E-15 3.1E-20 119.3 12.6 87 80-171 2-88 (275)
124 PRK06180 short chain dehydroge 99.7 1.5E-15 3.2E-20 119.0 12.8 89 78-171 2-90 (277)
125 TIGR03206 benzo_BadH 2-hydroxy 99.7 2.1E-15 4.5E-20 115.9 13.3 92 78-171 1-92 (250)
126 PRK06483 dihydromonapterin red 99.7 1E-15 2.2E-20 117.1 11.4 84 80-170 2-85 (236)
127 PRK12744 short chain dehydroge 99.7 2E-15 4.4E-20 116.9 13.2 93 77-171 5-101 (257)
128 PRK12826 3-ketoacyl-(acyl-carr 99.7 2.2E-15 4.8E-20 115.6 13.0 93 77-171 3-95 (251)
129 PRK06125 short chain dehydroge 99.7 2.5E-15 5.5E-20 116.4 13.4 89 78-171 5-93 (259)
130 TIGR02685 pter_reduc_Leis pter 99.7 1.5E-15 3.2E-20 118.3 11.8 90 81-171 2-96 (267)
131 PRK07806 short chain dehydroge 99.7 3.4E-15 7.3E-20 114.8 13.5 91 78-170 4-95 (248)
132 PRK12935 acetoacetyl-CoA reduc 99.7 3.2E-15 6.9E-20 114.9 13.3 92 78-171 4-96 (247)
133 PRK05993 short chain dehydroge 99.7 1.7E-15 3.6E-20 118.8 11.9 85 79-171 3-88 (277)
134 PRK08945 putative oxoacyl-(acy 99.7 2.5E-15 5.3E-20 115.7 12.6 94 77-171 9-104 (247)
135 PRK06841 short chain dehydroge 99.7 3.3E-15 7.1E-20 115.3 13.3 91 76-171 11-101 (255)
136 PRK08267 short chain dehydroge 99.7 2.4E-15 5.3E-20 116.5 12.6 87 81-171 2-89 (260)
137 PRK06057 short chain dehydroge 99.7 1.9E-15 4.1E-20 116.9 11.9 87 78-171 5-91 (255)
138 PRK12859 3-ketoacyl-(acyl-carr 99.7 2.6E-15 5.7E-20 116.3 12.7 92 78-171 4-108 (256)
139 TIGR02415 23BDH acetoin reduct 99.7 2.9E-15 6.3E-20 115.4 12.8 89 81-171 1-89 (254)
140 PRK12828 short chain dehydroge 99.6 3E-15 6.5E-20 114.0 12.7 91 77-171 4-94 (239)
141 KOG1199 Short-chain alcohol de 99.6 1E-15 2.2E-20 110.6 9.3 90 77-171 6-95 (260)
142 PRK12936 3-ketoacyl-(acyl-carr 99.6 4E-15 8.7E-20 113.9 13.4 89 78-171 4-92 (245)
143 PRK07201 short chain dehydroge 99.6 2.5E-15 5.4E-20 130.4 13.7 92 77-170 368-459 (657)
144 PRK12748 3-ketoacyl-(acyl-carr 99.6 3E-15 6.5E-20 115.8 12.7 92 78-171 3-107 (256)
145 PRK07775 short chain dehydroge 99.6 4.7E-15 1E-19 116.1 13.9 92 78-171 8-99 (274)
146 PRK06123 short chain dehydroge 99.6 3.7E-15 8E-20 114.5 13.1 90 80-171 2-92 (248)
147 PRK06523 short chain dehydroge 99.6 2.5E-15 5.4E-20 116.4 12.0 83 77-170 6-88 (260)
148 TIGR01500 sepiapter_red sepiap 99.6 3E-15 6.4E-20 116.0 12.3 89 82-170 2-98 (256)
149 PRK12745 3-ketoacyl-(acyl-carr 99.6 4.8E-15 1E-19 114.4 13.4 90 80-171 2-92 (256)
150 PLN00015 protochlorophyllide r 99.6 1.5E-15 3.3E-20 120.9 10.9 86 84-171 1-87 (308)
151 PRK06198 short chain dehydroge 99.6 3.6E-15 7.7E-20 115.4 12.7 93 77-171 3-96 (260)
152 PRK06171 sorbitol-6-phosphate 99.6 2.4E-15 5.1E-20 116.9 11.7 84 77-171 6-89 (266)
153 PRK07069 short chain dehydroge 99.6 4.4E-15 9.4E-20 114.2 12.9 89 83-171 2-91 (251)
154 COG1028 FabG Dehydrogenases wi 99.6 4.5E-15 9.7E-20 114.3 13.0 94 77-171 2-98 (251)
155 PRK05653 fabG 3-ketoacyl-(acyl 99.6 5.4E-15 1.2E-19 112.9 13.3 93 77-171 2-94 (246)
156 PRK06181 short chain dehydroge 99.6 4.4E-15 9.6E-20 115.2 13.0 90 80-171 1-90 (263)
157 PRK08263 short chain dehydroge 99.6 3.1E-15 6.7E-20 117.0 12.1 88 79-171 2-89 (275)
158 PRK08642 fabG 3-ketoacyl-(acyl 99.6 4.4E-15 9.5E-20 114.3 12.5 89 77-170 2-92 (253)
159 PRK07326 short chain dehydroge 99.6 5.9E-15 1.3E-19 112.6 13.1 91 78-171 4-94 (237)
160 PRK08703 short chain dehydroge 99.6 5.4E-15 1.2E-19 113.2 12.4 92 78-170 4-98 (239)
161 PRK06947 glucose-1-dehydrogena 99.6 6.6E-15 1.4E-19 113.2 12.9 90 80-171 2-92 (248)
162 PRK12746 short chain dehydroge 99.6 7.1E-15 1.5E-19 113.4 13.1 92 78-171 4-102 (254)
163 TIGR01829 AcAcCoA_reduct aceto 99.6 8E-15 1.7E-19 112.0 13.2 89 81-171 1-90 (242)
164 PRK05565 fabG 3-ketoacyl-(acyl 99.6 6.8E-15 1.5E-19 112.6 12.7 91 78-170 3-94 (247)
165 PRK07074 short chain dehydroge 99.6 8.7E-15 1.9E-19 113.2 13.2 88 80-171 2-89 (257)
166 PRK05693 short chain dehydroge 99.6 5E-15 1.1E-19 115.7 11.7 83 81-171 2-84 (274)
167 PRK05557 fabG 3-ketoacyl-(acyl 99.6 1.3E-14 2.8E-19 110.9 13.7 93 77-171 2-95 (248)
168 PRK12829 short chain dehydroge 99.6 8.6E-15 1.9E-19 113.3 12.2 90 77-170 8-97 (264)
169 KOG1014 17 beta-hydroxysteroid 99.6 7.1E-15 1.5E-19 114.9 11.5 89 80-172 49-139 (312)
170 PRK09730 putative NAD(P)-bindi 99.6 1.1E-14 2.4E-19 111.6 12.2 88 81-170 2-90 (247)
171 PRK06482 short chain dehydroge 99.6 9.1E-15 2E-19 114.3 11.9 87 80-171 2-88 (276)
172 TIGR01963 PHB_DH 3-hydroxybuty 99.6 1.5E-14 3.2E-19 111.4 12.8 90 80-171 1-90 (255)
173 PRK06077 fabG 3-ketoacyl-(acyl 99.6 2.5E-14 5.5E-19 110.0 14.0 92 78-171 4-96 (252)
174 PRK10538 malonic semialdehyde 99.6 1.5E-14 3.2E-19 111.5 12.4 85 81-170 1-85 (248)
175 PRK12827 short chain dehydroge 99.6 2.8E-14 6.1E-19 109.3 13.0 92 78-171 4-99 (249)
176 PRK07102 short chain dehydroge 99.6 2.6E-14 5.6E-19 109.7 12.5 87 81-171 2-88 (243)
177 KOG1209 1-Acyl dihydroxyaceton 99.6 1.1E-14 2.4E-19 108.4 9.9 85 79-170 6-92 (289)
178 PF08659 KR: KR domain; Inter 99.6 1.5E-14 3.3E-19 107.0 10.5 88 82-171 2-93 (181)
179 TIGR01831 fabG_rel 3-oxoacyl-( 99.6 3.5E-14 7.6E-19 108.6 12.6 87 83-171 1-88 (239)
180 PRK08220 2,3-dihydroxybenzoate 99.6 3E-14 6.5E-19 109.7 12.2 84 77-171 5-88 (252)
181 PRK12824 acetoacetyl-CoA reduc 99.6 4.2E-14 9.1E-19 108.2 12.9 89 81-171 3-92 (245)
182 PRK12825 fabG 3-ketoacyl-(acyl 99.6 6.3E-14 1.4E-18 107.1 13.7 92 78-171 4-96 (249)
183 PRK08324 short chain dehydroge 99.6 3.8E-14 8.2E-19 123.9 13.5 92 77-171 419-510 (681)
184 PRK05786 fabG 3-ketoacyl-(acyl 99.6 6.3E-14 1.4E-18 107.0 13.0 90 78-170 3-92 (238)
185 KOG1478 3-keto sterol reductas 99.6 3.2E-14 7E-19 108.3 11.1 94 79-172 2-102 (341)
186 PRK13656 trans-2-enoyl-CoA red 99.6 5.6E-14 1.2E-18 113.9 12.3 92 78-172 39-144 (398)
187 PF13561 adh_short_C2: Enoyl-( 99.6 3.9E-14 8.4E-19 108.8 10.4 83 87-172 1-86 (241)
188 PRK08261 fabG 3-ketoacyl-(acyl 99.5 8.6E-14 1.9E-18 116.2 12.9 90 77-171 207-296 (450)
189 PRK06300 enoyl-(acyl carrier p 99.5 3.1E-14 6.8E-19 113.1 7.7 94 76-170 4-130 (299)
190 TIGR01830 3oxo_ACP_reduc 3-oxo 99.5 2.3E-13 5.1E-18 103.6 12.3 87 83-171 1-88 (239)
191 COG0623 FabI Enoyl-[acyl-carri 99.5 3.6E-13 7.8E-18 101.2 12.0 93 77-172 3-97 (259)
192 PRK09291 short chain dehydroge 99.5 2.8E-13 6E-18 104.6 11.8 84 80-171 2-85 (257)
193 PRK12742 oxidoreductase; Provi 99.5 2.9E-13 6.4E-18 103.2 11.5 83 78-171 4-87 (237)
194 PRK07060 short chain dehydroge 99.5 4.1E-13 9E-18 102.8 12.4 84 77-171 6-89 (245)
195 PRK12367 short chain dehydroge 99.5 1.5E-13 3.2E-18 106.4 9.5 81 76-170 10-90 (245)
196 PRK06101 short chain dehydroge 99.5 1.8E-13 4E-18 105.0 9.7 81 81-170 2-82 (240)
197 PRK08177 short chain dehydroge 99.5 2.3E-13 5E-18 103.4 10.0 82 81-171 2-83 (225)
198 smart00822 PKS_KR This enzymat 99.5 6.4E-13 1.4E-17 96.0 11.3 89 81-171 1-93 (180)
199 PRK05884 short chain dehydroge 99.5 3.5E-13 7.6E-18 102.6 10.3 78 82-169 2-79 (223)
200 PRK08264 short chain dehydroge 99.5 5E-13 1.1E-17 102.1 11.2 80 77-169 3-83 (238)
201 KOG1611 Predicted short chain- 99.5 3.7E-13 8E-18 101.0 10.0 92 79-172 2-97 (249)
202 PRK07023 short chain dehydroge 99.5 5.2E-13 1.1E-17 102.5 11.1 83 82-171 3-89 (243)
203 PRK07041 short chain dehydroge 99.5 5.5E-13 1.2E-17 101.4 10.8 81 84-171 1-81 (230)
204 KOG1610 Corticosteroid 11-beta 99.5 6.7E-13 1.5E-17 104.0 11.1 91 78-172 27-119 (322)
205 PRK06924 short chain dehydroge 99.5 8.8E-13 1.9E-17 101.5 11.6 86 81-171 2-92 (251)
206 PRK07577 short chain dehydroge 99.5 8.3E-13 1.8E-17 100.5 11.1 79 79-171 2-80 (234)
207 KOG1210 Predicted 3-ketosphing 99.5 6.9E-13 1.5E-17 103.8 10.3 92 81-172 34-125 (331)
208 KOG1207 Diacetyl reductase/L-x 99.4 3.2E-13 7E-18 97.8 7.3 85 77-170 4-88 (245)
209 PRK07424 bifunctional sterol d 99.4 1.2E-12 2.7E-17 107.7 10.8 82 77-170 175-256 (406)
210 PRK06550 fabG 3-ketoacyl-(acyl 99.4 7.6E-13 1.7E-17 100.9 9.0 76 78-170 3-78 (235)
211 PRK08017 oxidoreductase; Provi 99.4 2E-12 4.4E-17 99.7 11.4 83 81-171 3-86 (256)
212 TIGR02813 omega_3_PfaA polyket 99.4 1.6E-12 3.5E-17 125.1 12.9 91 78-171 1995-2133(2582)
213 PLN03209 translocon at the inn 99.4 3.7E-12 8.1E-17 108.1 12.4 89 75-170 75-170 (576)
214 PRK06953 short chain dehydroge 99.4 2.9E-12 6.3E-17 97.2 10.1 80 81-170 2-81 (222)
215 PLN02989 cinnamyl-alcohol dehy 99.4 4.2E-12 9E-17 101.5 10.5 85 79-170 4-88 (325)
216 PRK08219 short chain dehydroge 99.4 5.6E-12 1.2E-16 95.4 10.6 81 80-171 3-83 (227)
217 TIGR03589 PseB UDP-N-acetylglu 99.4 5.7E-12 1.2E-16 101.1 10.6 83 77-170 1-85 (324)
218 PRK09009 C factor cell-cell si 99.4 5.8E-12 1.3E-16 96.1 10.0 77 81-171 1-79 (235)
219 TIGR02622 CDP_4_6_dhtase CDP-g 99.3 7.6E-12 1.6E-16 101.2 10.4 85 78-170 2-86 (349)
220 PLN02240 UDP-glucose 4-epimera 99.3 2.2E-11 4.7E-16 98.3 11.6 89 77-170 2-92 (352)
221 PRK07578 short chain dehydroge 99.3 1E-11 2.3E-16 92.6 9.0 66 82-171 2-67 (199)
222 TIGR01472 gmd GDP-mannose 4,6- 99.3 1.3E-11 2.9E-16 99.5 9.8 86 81-171 1-90 (343)
223 PLN02653 GDP-mannose 4,6-dehyd 99.3 1.4E-11 3.1E-16 99.1 9.7 90 77-171 3-95 (340)
224 PLN02986 cinnamyl-alcohol dehy 99.3 2.8E-11 6E-16 96.7 10.9 86 78-170 3-88 (322)
225 PRK08309 short chain dehydroge 99.3 8.3E-11 1.8E-15 86.8 12.2 85 82-170 2-86 (177)
226 COG1086 Predicted nucleoside-d 99.3 2.1E-11 4.6E-16 102.2 10.1 90 76-170 246-336 (588)
227 PLN02657 3,8-divinyl protochlo 99.3 7.4E-11 1.6E-15 97.1 13.1 90 75-169 55-146 (390)
228 PLN02572 UDP-sulfoquinovose sy 99.3 6.2E-11 1.3E-15 99.0 12.1 88 77-170 44-147 (442)
229 PLN02662 cinnamyl-alcohol dehy 99.3 4.8E-11 1E-15 95.1 10.2 84 79-170 3-87 (322)
230 PLN02896 cinnamyl-alcohol dehy 99.2 9.3E-11 2E-15 95.0 11.3 84 78-171 8-91 (353)
231 PLN02650 dihydroflavonol-4-red 99.2 1.6E-10 3.4E-15 93.5 10.9 85 79-170 4-88 (351)
232 PLN02214 cinnamoyl-CoA reducta 99.2 2.2E-10 4.8E-15 92.6 11.3 84 78-170 8-92 (342)
233 PLN00198 anthocyanidin reducta 99.2 1.7E-10 3.7E-15 92.8 10.6 85 78-170 7-91 (338)
234 KOG1502 Flavonol reductase/cin 99.2 1.3E-10 2.9E-15 92.3 9.7 84 79-171 5-90 (327)
235 PF02719 Polysacc_synt_2: Poly 99.2 4.8E-11 1E-15 93.8 6.6 82 83-169 1-87 (293)
236 PRK10675 UDP-galactose-4-epime 99.2 2.7E-10 5.8E-15 91.4 10.5 84 82-171 2-85 (338)
237 PRK15181 Vi polysaccharide bio 99.1 5.9E-10 1.3E-14 90.3 10.7 88 76-170 11-101 (348)
238 TIGR02114 coaB_strep phosphopa 99.1 1.9E-10 4.2E-15 88.1 7.4 76 82-171 16-92 (227)
239 PLN02686 cinnamoyl-CoA reducta 99.1 9.2E-10 2E-14 89.9 11.4 86 77-170 50-139 (367)
240 PRK10217 dTDP-glucose 4,6-dehy 99.1 3.8E-10 8.3E-15 91.2 9.1 84 81-171 2-86 (355)
241 KOG1371 UDP-glucose 4-epimeras 99.1 9.2E-10 2E-14 86.9 9.3 86 80-170 2-88 (343)
242 PLN02427 UDP-apiose/xylose syn 99.1 9.3E-10 2E-14 90.2 9.7 86 78-171 12-98 (386)
243 PLN02583 cinnamoyl-CoA reducta 99.0 3.1E-09 6.8E-14 84.2 11.5 82 79-169 5-88 (297)
244 TIGR01181 dTDP_gluc_dehyt dTDP 99.0 1.4E-09 3E-14 86.0 9.3 82 82-171 1-85 (317)
245 TIGR01179 galE UDP-glucose-4-e 99.0 1.5E-09 3.2E-14 86.1 9.5 81 82-170 1-81 (328)
246 PRK05579 bifunctional phosphop 99.0 1.6E-09 3.6E-14 89.2 9.3 79 77-171 185-279 (399)
247 PRK10084 dTDP-glucose 4,6 dehy 99.0 2.5E-09 5.4E-14 86.4 10.1 82 82-170 2-84 (352)
248 PLN00141 Tic62-NAD(P)-related 99.0 4.5E-09 9.8E-14 81.3 10.3 81 78-170 15-96 (251)
249 COG1087 GalE UDP-glucose 4-epi 99.0 2.5E-09 5.4E-14 83.8 8.6 77 82-170 2-78 (329)
250 PF13460 NAD_binding_10: NADH( 99.0 6.2E-09 1.3E-13 76.4 10.2 72 83-171 1-72 (183)
251 PF01370 Epimerase: NAD depend 99.0 8.8E-09 1.9E-13 78.2 10.8 76 83-170 1-76 (236)
252 PRK12548 shikimate 5-dehydroge 98.9 8.5E-09 1.8E-13 81.7 9.5 82 78-169 124-209 (289)
253 CHL00194 ycf39 Ycf39; Provisio 98.9 8E-09 1.7E-13 82.6 9.3 73 82-169 2-74 (317)
254 TIGR03466 HpnA hopanoid-associ 98.9 3.7E-09 8.1E-14 84.1 7.3 75 81-170 1-75 (328)
255 PLN02260 probable rhamnose bio 98.8 2.6E-08 5.7E-13 87.2 10.5 87 78-171 4-92 (668)
256 PRK09987 dTDP-4-dehydrorhamnos 98.8 1.1E-08 2.4E-13 81.2 7.4 65 82-171 2-66 (299)
257 PLN02695 GDP-D-mannose-3',5'-e 98.8 2.3E-08 5E-13 81.8 8.9 82 74-170 15-96 (370)
258 PRK11908 NAD-dependent epimera 98.8 3.8E-08 8.3E-13 79.5 10.1 77 81-171 2-80 (347)
259 cd01078 NAD_bind_H4MPT_DH NADP 98.8 1.4E-07 3E-12 70.4 11.6 83 77-169 25-107 (194)
260 PF01073 3Beta_HSD: 3-beta hyd 98.8 2.2E-08 4.7E-13 79.0 7.6 76 84-171 1-78 (280)
261 PRK08125 bifunctional UDP-gluc 98.8 4.9E-08 1.1E-12 85.5 9.7 80 78-171 313-394 (660)
262 TIGR00521 coaBC_dfp phosphopan 98.8 5.4E-08 1.2E-12 80.0 9.3 79 77-171 182-277 (390)
263 PRK11150 rfaD ADP-L-glycero-D- 98.8 3.6E-08 7.8E-13 78.2 8.1 76 83-170 2-79 (308)
264 KOG1204 Predicted dehydrogenas 98.7 1.7E-09 3.8E-14 81.4 0.3 92 78-172 4-95 (253)
265 TIGR01746 Thioester-redct thio 98.7 9.3E-08 2E-12 76.9 10.2 86 82-170 1-99 (367)
266 COG1088 RfbB dTDP-D-glucose 4, 98.7 4.4E-08 9.5E-13 76.7 7.8 82 81-171 1-86 (340)
267 TIGR01214 rmlD dTDP-4-dehydror 98.7 4E-08 8.8E-13 77.0 7.6 60 83-170 2-61 (287)
268 PRK05865 hypothetical protein; 98.7 1.4E-07 3E-12 84.1 10.1 71 82-170 2-72 (854)
269 COG0451 WcaG Nucleoside-diphos 98.7 7E-08 1.5E-12 76.2 6.9 75 82-171 2-76 (314)
270 PF04321 RmlD_sub_bind: RmlD s 98.6 8.8E-08 1.9E-12 75.8 6.9 62 82-171 2-63 (286)
271 PLN02206 UDP-glucuronate decar 98.6 2.8E-07 6E-12 77.2 9.6 79 78-171 117-195 (442)
272 TIGR02197 heptose_epim ADP-L-g 98.6 2E-07 4.2E-12 73.9 8.2 76 83-170 1-77 (314)
273 PLN02166 dTDP-glucose 4,6-dehy 98.6 8.3E-07 1.8E-11 74.2 11.9 78 79-171 119-196 (436)
274 PRK07201 short chain dehydroge 98.6 4.1E-07 8.8E-12 79.3 10.0 83 82-170 2-88 (657)
275 TIGR03649 ergot_EASG ergot alk 98.6 9.6E-08 2.1E-12 75.0 5.5 75 83-169 2-77 (285)
276 PLN02996 fatty acyl-CoA reduct 98.6 5.9E-07 1.3E-11 76.2 10.2 87 78-171 9-124 (491)
277 PLN02778 3,5-epimerase/4-reduc 98.5 8.1E-07 1.8E-11 70.6 9.4 60 81-171 10-69 (298)
278 PLN02503 fatty acyl-CoA reduct 98.5 1.2E-06 2.7E-11 75.7 10.9 87 78-171 117-231 (605)
279 COG1091 RfbD dTDP-4-dehydrorha 98.5 4.1E-07 9E-12 71.4 7.0 60 83-171 3-62 (281)
280 PLN02725 GDP-4-keto-6-deoxyman 98.5 1.8E-07 3.9E-12 73.8 5.0 60 84-170 1-60 (306)
281 PRK12320 hypothetical protein; 98.5 9.5E-07 2E-11 77.4 9.1 70 82-170 2-71 (699)
282 PRK14106 murD UDP-N-acetylmura 98.5 1.4E-06 3E-11 72.9 9.8 77 78-171 3-80 (450)
283 PF03435 Saccharop_dh: Sacchar 98.4 1.5E-06 3.2E-11 71.5 9.2 75 83-169 1-77 (386)
284 COG1748 LYS9 Saccharopine dehy 98.4 1.3E-06 2.8E-11 71.5 8.6 76 81-169 2-78 (389)
285 PRK09620 hypothetical protein; 98.4 6.9E-07 1.5E-11 68.5 6.5 82 78-170 1-98 (229)
286 PRK12428 3-alpha-hydroxysteroi 98.4 4E-07 8.7E-12 70.0 5.0 60 96-171 1-60 (241)
287 PF07993 NAD_binding_4: Male s 98.4 1.6E-06 3.4E-11 67.1 8.2 84 85-171 1-99 (249)
288 PF05368 NmrA: NmrA-like famil 98.4 2.8E-06 6E-11 64.9 9.4 75 83-170 1-75 (233)
289 PLN00016 RNA-binding protein; 98.3 1.4E-06 3.1E-11 71.3 7.0 82 79-169 51-140 (378)
290 PF01488 Shikimate_DH: Shikima 98.3 5.3E-06 1.2E-10 58.5 8.6 77 77-170 9-86 (135)
291 TIGR01777 yfcH conserved hypot 98.3 1.1E-06 2.4E-11 68.8 5.1 68 83-170 1-68 (292)
292 PRK06732 phosphopantothenate-- 98.3 5.3E-06 1.2E-10 63.7 8.7 76 82-171 17-93 (229)
293 COG0702 Predicted nucleoside-d 98.2 7.5E-06 1.6E-10 63.4 8.6 72 82-169 2-73 (275)
294 KOG1430 C-3 sterol dehydrogena 98.2 6.3E-06 1.4E-10 66.9 7.6 82 78-169 2-85 (361)
295 COG1090 Predicted nucleoside-d 98.2 2.2E-06 4.7E-11 66.7 4.3 35 83-117 1-35 (297)
296 PLN02260 probable rhamnose bio 98.2 9.2E-06 2E-10 71.3 8.5 61 80-171 380-440 (668)
297 KOG2733 Uncharacterized membra 98.2 1.1E-05 2.3E-10 64.9 7.9 82 82-170 7-94 (423)
298 COG3320 Putative dehydrogenase 98.2 2.2E-05 4.8E-10 63.6 9.8 83 81-170 1-98 (382)
299 COG1089 Gmd GDP-D-mannose dehy 98.1 5.9E-06 1.3E-10 64.6 5.8 86 80-170 2-89 (345)
300 PF04127 DFP: DNA / pantothena 98.1 2.9E-05 6.2E-10 57.7 8.7 77 78-170 1-93 (185)
301 PRK14982 acyl-ACP reductase; P 98.1 2.1E-05 4.4E-10 63.7 8.2 74 77-171 152-227 (340)
302 PRK02472 murD UDP-N-acetylmura 98.0 1.2E-05 2.7E-10 67.2 6.7 79 78-172 3-81 (447)
303 KOG1429 dTDP-glucose 4-6-dehyd 98.0 2.3E-05 5.1E-10 61.3 7.5 65 76-143 23-87 (350)
304 cd01065 NAD_bind_Shikimate_DH 98.0 6.8E-05 1.5E-09 53.5 8.8 75 78-170 17-92 (155)
305 TIGR00507 aroE shikimate 5-deh 97.9 0.0001 2.2E-09 57.9 9.3 75 78-170 115-189 (270)
306 KOG2865 NADH:ubiquinone oxidor 97.9 4.3E-05 9.3E-10 60.0 6.7 84 77-170 58-141 (391)
307 PRK00258 aroE shikimate 5-dehy 97.9 0.00012 2.6E-09 57.7 9.0 48 77-125 120-168 (278)
308 KOG1221 Acyl-CoA reductase [Li 97.8 5.8E-05 1.3E-09 63.1 7.0 93 78-171 10-118 (467)
309 PLN02520 bifunctional 3-dehydr 97.8 0.00011 2.3E-09 63.1 8.2 47 77-124 376-422 (529)
310 TIGR03443 alpha_am_amid L-amin 97.8 0.00021 4.6E-09 67.4 10.8 88 80-171 971-1073(1389)
311 PRK06849 hypothetical protein; 97.8 0.00043 9.3E-09 57.0 11.2 83 78-167 2-84 (389)
312 KOG1202 Animal-type fatty acid 97.7 0.00012 2.7E-09 66.7 7.5 96 73-171 1761-1860(2376)
313 PRK12549 shikimate 5-dehydroge 97.7 0.00047 1E-08 54.6 10.1 50 78-128 125-175 (284)
314 COG2910 Putative NADH-flavin r 97.7 0.00023 4.9E-09 52.5 7.3 72 82-170 2-73 (211)
315 cd08266 Zn_ADH_like1 Alcohol d 97.5 0.00073 1.6E-08 53.6 9.2 81 78-169 165-245 (342)
316 cd08295 double_bond_reductase_ 97.5 0.00067 1.5E-08 54.5 9.0 81 78-168 150-230 (338)
317 PRK12475 thiamine/molybdopteri 97.5 0.0016 3.5E-08 52.8 11.1 81 78-167 22-124 (338)
318 cd08259 Zn_ADH5 Alcohol dehydr 97.4 0.0012 2.6E-08 52.4 9.2 39 79-117 162-200 (332)
319 cd08253 zeta_crystallin Zeta-c 97.4 0.00059 1.3E-08 53.6 7.3 81 78-169 143-223 (325)
320 PRK13982 bifunctional SbtC-lik 97.4 0.0013 2.9E-08 55.5 9.5 77 77-170 253-345 (475)
321 cd01075 NAD_bind_Leu_Phe_Val_D 97.4 0.00028 6.1E-09 53.0 4.8 47 76-123 24-70 (200)
322 KOG1203 Predicted dehydrogenas 97.4 0.0018 3.9E-08 53.5 9.8 48 75-122 74-121 (411)
323 TIGR01809 Shik-DH-AROM shikima 97.4 0.0018 3.9E-08 51.3 9.5 47 78-125 123-170 (282)
324 TIGR00518 alaDH alanine dehydr 97.4 0.0023 4.9E-08 52.6 10.3 76 78-169 165-240 (370)
325 PRK14027 quinate/shikimate deh 97.4 0.0028 6E-08 50.2 10.4 49 78-127 125-174 (283)
326 TIGR02356 adenyl_thiF thiazole 97.4 0.0032 6.9E-08 47.4 10.3 81 78-167 19-119 (202)
327 PF00056 Ldh_1_N: lactate/mala 97.4 0.0031 6.7E-08 44.7 9.6 77 82-172 2-82 (141)
328 cd01336 MDH_cytoplasmic_cytoso 97.3 0.00037 7.9E-09 56.3 5.1 79 82-172 4-91 (325)
329 COG0169 AroE Shikimate 5-dehyd 97.3 0.0014 3.1E-08 51.8 8.3 49 78-127 124-173 (283)
330 PLN03154 putative allyl alcoho 97.3 0.0014 3.1E-08 53.1 8.6 81 78-168 157-237 (348)
331 cd05276 p53_inducible_oxidored 97.3 0.0021 4.5E-08 50.3 9.3 81 78-169 138-218 (323)
332 PRK09310 aroDE bifunctional 3- 97.3 0.001 2.3E-08 56.4 8.0 45 77-122 329-373 (477)
333 COG3268 Uncharacterized conser 97.3 0.00091 2E-08 53.6 7.0 76 81-170 7-82 (382)
334 TIGR02825 B4_12hDH leukotriene 97.3 0.001 2.3E-08 53.0 7.5 79 79-168 138-216 (325)
335 COG0604 Qor NADPH:quinone redu 97.3 0.0016 3.5E-08 52.5 8.7 76 80-168 143-220 (326)
336 PRK13940 glutamyl-tRNA reducta 97.3 0.0019 4.1E-08 53.8 8.8 76 77-171 178-254 (414)
337 PRK07688 thiamine/molybdopteri 97.3 0.005 1.1E-07 50.0 11.0 81 78-167 22-124 (339)
338 TIGR00715 precor6x_red precorr 97.3 0.0012 2.5E-08 51.6 6.9 72 82-167 2-73 (256)
339 PRK08762 molybdopterin biosynt 97.2 0.0046 9.9E-08 50.9 10.7 82 78-168 133-234 (376)
340 cd08293 PTGR2 Prostaglandin re 97.2 0.0016 3.5E-08 52.2 7.9 78 81-169 156-234 (345)
341 cd00757 ThiF_MoeB_HesA_family 97.2 0.0075 1.6E-07 46.2 10.8 82 78-168 19-120 (228)
342 cd05291 HicDH_like L-2-hydroxy 97.2 0.0038 8.2E-08 49.9 9.3 75 82-171 2-80 (306)
343 PRK09424 pntA NAD(P) transhydr 97.2 0.0062 1.4E-07 52.0 10.9 85 78-171 163-260 (509)
344 KOG1198 Zinc-binding oxidoredu 97.2 0.0051 1.1E-07 50.1 10.0 80 78-169 156-235 (347)
345 PRK05690 molybdopterin biosynt 97.2 0.011 2.3E-07 45.9 11.4 82 77-167 29-130 (245)
346 cd05188 MDR Medium chain reduc 97.1 0.0028 6E-08 48.5 8.0 79 78-169 133-211 (271)
347 TIGR02853 spore_dpaA dipicolin 97.1 0.004 8.7E-08 49.4 8.9 41 76-117 147-187 (287)
348 PTZ00325 malate dehydrogenase; 97.1 0.0022 4.8E-08 51.7 7.3 81 78-171 6-88 (321)
349 COG4982 3-oxoacyl-[acyl-carrie 97.1 0.0064 1.4E-07 52.6 10.1 80 77-156 393-476 (866)
350 PRK08644 thiamine biosynthesis 97.1 0.012 2.5E-07 44.7 10.7 80 78-166 26-124 (212)
351 PRK12749 quinate/shikimate deh 97.1 0.0046 1E-07 49.1 8.9 47 78-125 122-172 (288)
352 PRK14192 bifunctional 5,10-met 97.1 0.0034 7.3E-08 49.7 7.9 40 76-115 155-194 (283)
353 PLN00106 malate dehydrogenase 97.0 0.002 4.3E-08 52.0 6.3 81 79-172 17-99 (323)
354 PF00899 ThiF: ThiF family; I 97.0 0.027 5.8E-07 39.4 11.4 80 80-168 2-101 (135)
355 PRK00045 hemA glutamyl-tRNA re 97.0 0.0062 1.4E-07 50.9 9.2 45 78-123 180-225 (423)
356 PRK05597 molybdopterin biosynt 97.0 0.015 3.2E-07 47.6 11.1 81 78-167 26-126 (355)
357 cd01487 E1_ThiF_like E1_ThiF_l 97.0 0.017 3.7E-07 42.4 10.3 75 83-166 2-95 (174)
358 TIGR02824 quinone_pig3 putativ 96.9 0.0071 1.5E-07 47.5 8.9 81 78-169 138-218 (325)
359 TIGR01035 hemA glutamyl-tRNA r 96.9 0.0072 1.6E-07 50.4 9.2 44 78-122 178-222 (417)
360 COG1064 AdhP Zn-dependent alco 96.9 0.007 1.5E-07 49.0 8.7 74 78-168 165-238 (339)
361 cd01483 E1_enzyme_family Super 96.9 0.023 4.9E-07 40.1 10.5 77 83-168 2-98 (143)
362 COG0569 TrkA K+ transport syst 96.9 0.0062 1.4E-07 46.6 8.0 74 82-168 2-75 (225)
363 cd08294 leukotriene_B4_DH_like 96.9 0.0083 1.8E-07 47.6 9.1 41 78-118 142-182 (329)
364 cd05288 PGDH Prostaglandin deh 96.9 0.01 2.2E-07 47.2 9.5 79 79-168 145-223 (329)
365 cd00704 MDH Malate dehydrogena 96.9 0.0041 8.8E-08 50.2 7.2 75 82-172 2-89 (323)
366 PRK09496 trkA potassium transp 96.9 0.0069 1.5E-07 50.7 8.7 59 82-148 2-60 (453)
367 PRK09880 L-idonate 5-dehydroge 96.9 0.0055 1.2E-07 49.4 7.9 76 79-169 169-245 (343)
368 PLN02819 lysine-ketoglutarate 96.9 0.0062 1.3E-07 56.0 8.9 77 79-169 568-658 (1042)
369 KOG1431 GDP-L-fucose synthetas 96.9 0.0034 7.4E-08 48.0 6.0 62 81-170 2-66 (315)
370 TIGR02354 thiF_fam2 thiamine b 96.8 0.024 5.2E-07 42.6 10.5 35 78-113 19-54 (200)
371 cd08268 MDR2 Medium chain dehy 96.8 0.0095 2.1E-07 46.8 8.7 41 78-118 143-183 (328)
372 cd05213 NAD_bind_Glutamyl_tRNA 96.8 0.012 2.6E-07 47.2 9.0 45 78-123 176-221 (311)
373 PLN00203 glutamyl-tRNA reducta 96.8 0.011 2.4E-07 50.6 9.3 46 78-124 264-310 (519)
374 PRK05600 thiamine biosynthesis 96.8 0.028 6.1E-07 46.2 11.3 81 78-167 39-139 (370)
375 KOG1372 GDP-mannose 4,6 dehydr 96.8 0.0073 1.6E-07 46.8 7.2 74 79-153 27-105 (376)
376 PRK08223 hypothetical protein; 96.8 0.02 4.4E-07 45.4 9.9 81 78-167 25-125 (287)
377 TIGR01915 npdG NADPH-dependent 96.7 0.043 9.4E-07 41.6 11.5 42 82-123 2-43 (219)
378 TIGR00561 pntA NAD(P) transhyd 96.7 0.029 6.4E-07 47.9 11.3 81 78-167 162-255 (511)
379 TIGR02355 moeB molybdopterin s 96.7 0.034 7.3E-07 43.0 10.8 81 78-167 22-122 (240)
380 PF02254 TrkA_N: TrkA-N domain 96.7 0.0092 2E-07 40.3 6.9 58 83-149 1-58 (116)
381 PRK08306 dipicolinate synthase 96.7 0.012 2.7E-07 46.8 8.5 39 77-116 149-187 (296)
382 PRK00066 ldh L-lactate dehydro 96.7 0.026 5.6E-07 45.4 10.3 78 79-171 5-85 (315)
383 PRK08328 hypothetical protein; 96.7 0.041 9E-07 42.2 11.0 35 78-113 25-60 (231)
384 PRK05086 malate dehydrogenase; 96.7 0.0026 5.6E-08 51.1 4.4 35 81-115 1-38 (312)
385 cd01080 NAD_bind_m-THF_DH_Cycl 96.7 0.0084 1.8E-07 43.9 6.6 43 77-119 41-83 (168)
386 PRK01438 murD UDP-N-acetylmura 96.6 0.026 5.5E-07 47.8 10.5 77 78-172 14-91 (480)
387 cd01489 Uba2_SUMO Ubiquitin ac 96.6 0.025 5.4E-07 45.5 9.7 77 83-167 2-98 (312)
388 cd00755 YgdL_like Family of ac 96.6 0.032 6.9E-07 42.9 9.9 82 78-167 9-110 (231)
389 PRK15116 sulfur acceptor prote 96.6 0.038 8.3E-07 43.4 10.5 83 78-168 28-130 (268)
390 PF03446 NAD_binding_2: NAD bi 96.6 0.038 8.3E-07 39.9 9.8 85 82-169 3-96 (163)
391 KOG0747 Putative NAD+-dependen 96.5 0.0023 5.1E-08 50.3 3.1 84 80-170 6-91 (331)
392 PF12242 Eno-Rase_NADH_b: NAD( 96.5 0.0051 1.1E-07 38.7 4.0 33 81-113 40-73 (78)
393 cd08244 MDR_enoyl_red Possible 96.5 0.02 4.4E-07 45.2 8.5 79 79-168 142-220 (324)
394 cd08238 sorbose_phosphate_red 96.5 0.025 5.4E-07 46.9 9.3 42 79-120 175-219 (410)
395 TIGR02818 adh_III_F_hyde S-(hy 96.4 0.031 6.8E-07 45.6 9.5 80 78-169 184-265 (368)
396 PRK08655 prephenate dehydrogen 96.4 0.06 1.3E-06 45.3 11.3 38 82-119 2-39 (437)
397 cd08239 THR_DH_like L-threonin 96.4 0.016 3.5E-07 46.4 7.6 79 78-169 162-241 (339)
398 cd01484 E1-2_like Ubiquitin ac 96.4 0.058 1.3E-06 41.6 10.3 78 83-167 2-99 (234)
399 PRK04148 hypothetical protein; 96.4 0.012 2.5E-07 41.5 5.8 56 79-144 16-71 (134)
400 cd05191 NAD_bind_amino_acid_DH 96.4 0.029 6.2E-07 36.1 7.3 35 77-112 20-55 (86)
401 cd01485 E1-1_like Ubiquitin ac 96.4 0.075 1.6E-06 39.8 10.5 81 78-166 17-120 (198)
402 PF01113 DapB_N: Dihydrodipico 96.4 0.053 1.2E-06 37.5 8.9 81 82-170 2-102 (124)
403 PRK04308 murD UDP-N-acetylmura 96.3 0.043 9.3E-07 46.0 9.9 78 78-172 3-80 (445)
404 cd08243 quinone_oxidoreductase 96.3 0.041 8.9E-07 43.2 9.3 40 78-117 141-180 (320)
405 cd01492 Aos1_SUMO Ubiquitin ac 96.3 0.059 1.3E-06 40.4 9.6 80 78-167 19-118 (197)
406 PLN02740 Alcohol dehydrogenase 96.3 0.035 7.7E-07 45.5 9.0 80 78-169 197-278 (381)
407 PRK09496 trkA potassium transp 96.3 0.025 5.5E-07 47.3 8.2 63 78-147 229-291 (453)
408 PF02737 3HCDH_N: 3-hydroxyacy 96.3 0.021 4.5E-07 42.2 6.9 43 82-125 1-43 (180)
409 PRK05476 S-adenosyl-L-homocyst 96.3 0.032 7E-07 46.7 8.6 40 77-117 209-248 (425)
410 cd08250 Mgc45594_like Mgc45594 96.2 0.03 6.4E-07 44.5 8.2 41 78-118 138-178 (329)
411 cd08300 alcohol_DH_class_III c 96.2 0.028 6E-07 45.8 8.1 80 78-169 185-266 (368)
412 cd00650 LDH_MDH_like NAD-depen 96.2 0.034 7.3E-07 43.4 8.1 45 83-127 1-49 (263)
413 PRK14851 hypothetical protein; 96.2 0.072 1.6E-06 47.2 10.8 81 78-167 41-141 (679)
414 TIGR01758 MDH_euk_cyt malate d 96.2 0.018 3.8E-07 46.6 6.6 76 83-172 2-88 (324)
415 cd08230 glucose_DH Glucose deh 96.2 0.037 8E-07 44.8 8.6 35 78-113 171-205 (355)
416 TIGR03201 dearomat_had 6-hydro 96.2 0.072 1.6E-06 43.0 10.2 40 78-118 165-204 (349)
417 PTZ00082 L-lactate dehydrogena 96.2 0.084 1.8E-06 42.6 10.4 40 77-117 3-43 (321)
418 TIGR01381 E1_like_apg7 E1-like 96.2 0.054 1.2E-06 47.4 9.7 89 78-167 336-456 (664)
419 cd08290 ETR 2-enoyl thioester 96.1 0.044 9.6E-07 43.8 8.7 38 78-115 145-182 (341)
420 cd08289 MDR_yhfp_like Yhfp put 96.1 0.057 1.2E-06 42.7 9.3 41 79-119 146-186 (326)
421 cd01486 Apg7 Apg7 is an E1-lik 96.1 0.058 1.3E-06 43.1 9.1 57 83-140 2-80 (307)
422 PF02826 2-Hacid_dh_C: D-isome 96.1 0.027 5.9E-07 41.4 6.8 41 76-117 32-72 (178)
423 cd05286 QOR2 Quinone oxidoredu 96.1 0.046 1E-06 42.6 8.6 41 78-118 135-175 (320)
424 cd08292 ETR_like_2 2-enoyl thi 96.1 0.046 9.9E-07 43.2 8.6 40 79-118 139-178 (324)
425 cd08241 QOR1 Quinone oxidoredu 96.1 0.041 8.8E-07 43.0 8.2 41 78-118 138-178 (323)
426 PLN02586 probable cinnamyl alc 96.1 0.049 1.1E-06 44.3 8.8 38 79-117 183-220 (360)
427 cd08291 ETR_like_1 2-enoyl thi 96.1 0.075 1.6E-06 42.3 9.7 77 81-168 145-221 (324)
428 PTZ00354 alcohol dehydrogenase 96.1 0.075 1.6E-06 42.0 9.7 40 79-118 140-179 (334)
429 COG0373 HemA Glutamyl-tRNA red 96.0 0.042 9.1E-07 45.7 8.2 46 78-124 176-222 (414)
430 PTZ00117 malate dehydrogenase; 96.0 0.087 1.9E-06 42.4 9.7 39 79-118 4-43 (319)
431 PRK14194 bifunctional 5,10-met 96.0 0.043 9.4E-07 43.8 7.7 43 76-118 155-197 (301)
432 cd08301 alcohol_DH_plants Plan 96.0 0.068 1.5E-06 43.5 9.2 80 78-169 186-267 (369)
433 cd08299 alcohol_DH_class_I_II_ 96.0 0.072 1.6E-06 43.6 9.4 79 79-169 190-270 (373)
434 PLN02827 Alcohol dehydrogenase 96.0 0.069 1.5E-06 43.8 9.3 80 78-169 192-273 (378)
435 PLN02178 cinnamyl-alcohol dehy 96.0 0.069 1.5E-06 43.8 9.2 37 79-116 178-214 (375)
436 cd05212 NAD_bind_m-THF_DH_Cycl 96.0 0.033 7.1E-07 39.5 6.4 43 77-119 25-67 (140)
437 cd05311 NAD_bind_2_malic_enz N 96.0 0.048 1E-06 41.8 7.7 36 77-113 22-60 (226)
438 cd05282 ETR_like 2-enoyl thioe 95.9 0.061 1.3E-06 42.4 8.6 40 78-117 137-176 (323)
439 KOG4022 Dihydropteridine reduc 95.9 0.13 2.8E-06 37.6 9.2 79 80-170 3-83 (236)
440 cd05293 LDH_1 A subgroup of L- 95.9 0.12 2.7E-06 41.5 10.2 78 81-172 4-84 (312)
441 cd08281 liver_ADH_like1 Zinc-d 95.9 0.046 1E-06 44.6 7.9 79 78-169 190-269 (371)
442 PRK06718 precorrin-2 dehydroge 95.9 0.19 4.1E-06 37.8 10.5 36 78-114 8-43 (202)
443 cd08248 RTN4I1 Human Reticulon 95.9 0.11 2.3E-06 41.7 9.8 35 79-113 162-196 (350)
444 PRK07877 hypothetical protein; 95.9 0.093 2E-06 46.8 10.0 80 78-167 105-204 (722)
445 PRK13771 putative alcohol dehy 95.9 0.094 2E-06 41.7 9.4 41 79-119 162-202 (334)
446 PRK13243 glyoxylate reductase; 95.8 0.094 2E-06 42.5 9.2 38 77-115 147-184 (333)
447 PRK14175 bifunctional 5,10-met 95.8 0.037 8E-07 43.9 6.6 41 77-117 155-195 (286)
448 PRK07411 hypothetical protein; 95.8 0.15 3.2E-06 42.3 10.5 82 78-168 36-137 (390)
449 TIGR03451 mycoS_dep_FDH mycoth 95.8 0.044 9.4E-07 44.5 7.3 80 78-169 175-255 (358)
450 KOG0023 Alcohol dehydrogenase, 95.8 0.091 2E-06 42.3 8.7 80 74-166 176-257 (360)
451 TIGR03366 HpnZ_proposed putati 95.8 0.094 2E-06 41.0 8.9 38 79-117 120-158 (280)
452 cd08277 liver_alcohol_DH_like 95.8 0.091 2E-06 42.7 9.1 80 78-169 183-264 (365)
453 PF00107 ADH_zinc_N: Zinc-bind 95.8 0.042 9.2E-07 37.6 6.2 66 91-169 1-68 (130)
454 COG2227 UbiG 2-polyprenyl-3-me 95.8 0.07 1.5E-06 41.1 7.7 41 78-121 58-98 (243)
455 TIGR01470 cysG_Nterm siroheme 95.7 0.13 2.7E-06 38.9 9.1 36 78-114 7-42 (205)
456 cd08297 CAD3 Cinnamyl alcohol 95.7 0.096 2.1E-06 41.9 9.0 40 79-118 165-204 (341)
457 PRK07878 molybdopterin biosynt 95.7 0.17 3.6E-06 42.0 10.5 81 78-167 40-140 (392)
458 PRK12480 D-lactate dehydrogena 95.7 0.2 4.4E-06 40.6 10.7 88 77-168 143-234 (330)
459 cd08233 butanediol_DH_like (2R 95.7 0.055 1.2E-06 43.6 7.5 78 79-168 172-250 (351)
460 PRK12550 shikimate 5-dehydroge 95.7 0.037 8E-07 43.6 6.3 43 80-123 122-165 (272)
461 COG0039 Mdh Malate/lactate deh 95.7 0.049 1.1E-06 43.7 7.0 78 82-172 2-82 (313)
462 KOG4039 Serine/threonine kinas 95.7 0.017 3.8E-07 42.6 4.0 81 75-171 13-95 (238)
463 cd01488 Uba3_RUB Ubiquitin act 95.7 0.17 3.7E-06 40.3 9.9 75 83-167 2-96 (291)
464 cd05294 LDH-like_MDH_nadp A la 95.6 0.053 1.1E-06 43.5 7.1 33 82-114 2-36 (309)
465 cd08231 MDR_TM0436_like Hypoth 95.6 0.15 3.3E-06 41.2 9.8 38 79-117 177-215 (361)
466 PRK14852 hypothetical protein; 95.6 0.15 3.4E-06 46.7 10.4 81 78-167 330-430 (989)
467 smart00829 PKS_ER Enoylreducta 95.6 0.093 2E-06 40.2 8.1 41 78-118 103-143 (288)
468 PF12076 Wax2_C: WAX2 C-termin 95.5 0.04 8.7E-07 39.7 5.4 40 83-124 1-40 (164)
469 TIGR01751 crot-CoA-red crotony 95.5 0.14 3E-06 42.2 9.5 39 78-116 188-226 (398)
470 PLN02602 lactate dehydrogenase 95.5 0.17 3.8E-06 41.3 9.8 77 81-171 38-117 (350)
471 PF00670 AdoHcyase_NAD: S-aden 95.5 0.059 1.3E-06 39.1 6.3 42 75-117 18-59 (162)
472 PRK06487 glycerate dehydrogena 95.5 0.06 1.3E-06 43.4 7.0 36 77-113 145-180 (317)
473 PLN03139 formate dehydrogenase 95.5 0.17 3.7E-06 41.9 9.7 88 76-166 195-290 (386)
474 PRK14188 bifunctional 5,10-met 95.5 0.092 2E-06 41.9 7.9 38 77-114 155-193 (296)
475 cd08246 crotonyl_coA_red croto 95.5 0.16 3.5E-06 41.6 9.7 41 78-118 192-232 (393)
476 cd08296 CAD_like Cinnamyl alco 95.5 0.14 3.1E-06 40.9 9.1 39 79-118 163-201 (333)
477 PRK07530 3-hydroxybutyryl-CoA 95.4 0.085 1.8E-06 41.7 7.6 42 80-122 4-45 (292)
478 PF02882 THF_DHG_CYH_C: Tetrah 95.4 0.036 7.9E-07 40.2 5.0 43 77-119 33-75 (160)
479 PRK06223 malate dehydrogenase; 95.4 0.18 4E-06 40.1 9.5 43 81-124 3-46 (307)
480 cd05290 LDH_3 A subgroup of L- 95.4 0.21 4.6E-06 40.0 9.8 74 83-171 2-80 (307)
481 COG2130 Putative NADP-dependen 95.4 0.056 1.2E-06 43.1 6.3 78 79-169 150-229 (340)
482 PF13241 NAD_binding_7: Putati 95.4 0.024 5.2E-07 37.9 3.7 37 77-114 4-40 (103)
483 cd08274 MDR9 Medium chain dehy 95.4 0.13 2.8E-06 41.2 8.7 36 78-113 176-211 (350)
484 PF03807 F420_oxidored: NADP o 95.4 0.068 1.5E-06 34.7 5.8 40 84-124 3-46 (96)
485 cd01338 MDH_choloroplast_like 95.4 0.068 1.5E-06 43.2 6.8 77 81-171 3-90 (322)
486 PRK15469 ghrA bifunctional gly 95.3 0.17 3.7E-06 40.6 9.1 89 76-168 132-226 (312)
487 PRK00141 murD UDP-N-acetylmura 95.3 0.17 3.6E-06 43.0 9.5 39 76-115 11-49 (473)
488 PRK14968 putative methyltransf 95.3 0.16 3.5E-06 37.0 8.2 78 79-170 23-101 (188)
489 PRK09288 purT phosphoribosylgl 95.3 0.19 4.1E-06 41.4 9.4 71 80-166 12-82 (395)
490 COG3007 Uncharacterized paraqu 95.3 0.14 3.1E-06 40.7 8.0 87 80-167 41-139 (398)
491 TIGR00872 gnd_rel 6-phosphoglu 95.2 0.62 1.3E-05 37.0 11.9 85 82-170 2-96 (298)
492 PRK08410 2-hydroxyacid dehydro 95.2 0.11 2.3E-06 41.8 7.4 66 77-143 142-209 (311)
493 cd05195 enoyl_red enoyl reduct 95.2 0.21 4.6E-06 38.1 9.0 40 78-117 107-146 (293)
494 PLN02494 adenosylhomocysteinas 95.2 0.18 3.8E-06 42.8 8.9 40 76-116 250-289 (477)
495 PRK10754 quinone oxidoreductas 95.2 0.14 3E-06 40.7 8.1 40 78-117 139-178 (327)
496 PRK14191 bifunctional 5,10-met 95.1 0.095 2.1E-06 41.6 6.9 41 77-117 154-194 (285)
497 PRK08293 3-hydroxybutyryl-CoA 95.1 0.68 1.5E-05 36.5 11.8 41 81-122 4-44 (287)
498 PF03808 Glyco_tran_WecB: Glyc 95.1 0.39 8.5E-06 35.1 9.8 73 94-168 38-110 (172)
499 PLN02928 oxidoreductase family 95.1 0.13 2.9E-06 41.9 8.0 36 77-113 156-191 (347)
500 cd08260 Zn_ADH6 Alcohol dehydr 95.1 0.17 3.8E-06 40.5 8.6 41 78-119 164-204 (345)
No 1
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.87 E-value=1.7e-21 Score=151.80 Aligned_cols=96 Identities=31% Similarity=0.423 Sum_probs=88.9
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
..+.+|+++||||++|||.++|+.|++.|++++++.|....++...+++.+.....+++++++||+|.++++++++.+.+
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence 44789999999999999999999999999999999999999999888888876653599999999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
+||++|+||||||+..
T Consensus 88 ~fg~vDvLVNNAG~~~ 103 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISL 103 (282)
T ss_pred hcCCCCEEEecCcccc
Confidence 9999999999999875
No 2
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.86 E-value=5.2e-21 Score=148.00 Aligned_cols=94 Identities=23% Similarity=0.357 Sum_probs=88.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
++.+++++||||++|||+++|+.|+++|++|+++.|+.++++++.++++...+. .+.++.+|++++++++++.+++.+.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v-~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGV-EVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCc-eEEEEECcCCChhHHHHHHHHHHhc
Confidence 467899999999999999999999999999999999999999999999988754 7999999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
.+.||+||||||+..
T Consensus 82 ~~~IdvLVNNAG~g~ 96 (265)
T COG0300 82 GGPIDVLVNNAGFGT 96 (265)
T ss_pred CCcccEEEECCCcCC
Confidence 999999999999875
No 3
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.86 E-value=5.7e-21 Score=144.66 Aligned_cols=91 Identities=25% Similarity=0.371 Sum_probs=84.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+|+++||||++|||.++|+.|++.|++|++++|+.+.++++..++.+ ..+..+.+||+|.++++.+++.+.++|
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~~ 79 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEEF 79 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence 5679999999999999999999999999999999999999888888754 258899999999999999999999999
Q ss_pred CCccEEEEcccCCCC
Q 030706 158 KYVDIWVFMSDLHSS 172 (173)
Q Consensus 158 g~id~lVn~AG~~~~ 172 (173)
|+||+||||||+...
T Consensus 80 g~iDiLvNNAGl~~g 94 (246)
T COG4221 80 GRIDILVNNAGLALG 94 (246)
T ss_pred CcccEEEecCCCCcC
Confidence 999999999998753
No 4
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.83 E-value=7.5e-20 Score=142.01 Aligned_cols=96 Identities=26% Similarity=0.386 Sum_probs=88.7
Q ss_pred CCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706 74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA 153 (173)
Q Consensus 74 ~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 153 (173)
+..+..|+++|||||++|||+++|.+|+++|+++++.|.+.+..++..+++.+. + +++.+.||++|.+++.++.+++
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g--~~~~y~cdis~~eei~~~a~~V 108 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-G--EAKAYTCDISDREEIYRLAKKV 108 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-C--ceeEEEecCCCHHHHHHHHHHH
Confidence 334588999999999999999999999999999999999999999999988876 3 6999999999999999999999
Q ss_pred HHhcCCccEEEEcccCCCC
Q 030706 154 QKNLKYVDIWVFMSDLHSS 172 (173)
Q Consensus 154 ~~~~g~id~lVn~AG~~~~ 172 (173)
++++|.+|+||||||+...
T Consensus 109 k~e~G~V~ILVNNAGI~~~ 127 (300)
T KOG1201|consen 109 KKEVGDVDILVNNAGIVTG 127 (300)
T ss_pred HHhcCCceEEEeccccccC
Confidence 9999999999999999864
No 5
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.83 E-value=1e-19 Score=144.89 Aligned_cols=101 Identities=22% Similarity=0.303 Sum_probs=92.5
Q ss_pred CCCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706 73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF 152 (173)
Q Consensus 73 ~~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 152 (173)
.....+.+++++|||+++|||+++|+.|+.+|++|++.+|+.+..++..+++.......++.++++|+++.++|.++.++
T Consensus 28 ~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~ 107 (314)
T KOG1208|consen 28 THGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE 107 (314)
T ss_pred eccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence 34455788999999999999999999999999999999999999999999998866666899999999999999999999
Q ss_pred HHHhcCCccEEEEcccCCCCC
Q 030706 153 AQKNLKYVDIWVFMSDLHSSS 173 (173)
Q Consensus 153 ~~~~~g~id~lVn~AG~~~~s 173 (173)
+++.++++|+||||||+..++
T Consensus 108 ~~~~~~~ldvLInNAGV~~~~ 128 (314)
T KOG1208|consen 108 FKKKEGPLDVLINNAGVMAPP 128 (314)
T ss_pred HHhcCCCccEEEeCcccccCC
Confidence 999999999999999998753
No 6
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.83 E-value=2e-19 Score=143.59 Aligned_cols=96 Identities=22% Similarity=0.319 Sum_probs=86.8
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
..+.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+++....++.++.++.+|++|.++++++++++.+
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 34789999999999999999999999999999999999988888888887655444688999999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.++++|+||||||+..
T Consensus 90 ~~~~iD~li~nAG~~~ 105 (313)
T PRK05854 90 EGRPIHLLINNAGVMT 105 (313)
T ss_pred hCCCccEEEECCcccc
Confidence 9999999999999864
No 7
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.81 E-value=1.8e-19 Score=132.89 Aligned_cols=90 Identities=31% Similarity=0.554 Sum_probs=81.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.|.++|||||++|||++++++|.+.|.+|++++|+++.+++..++. + .++...||+.|.++.+++++.++++
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p--~~~t~v~Dv~d~~~~~~lvewLkk~ 75 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----P--EIHTEVCDVADRDSRRELVEWLKKE 75 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----c--chheeeecccchhhHHHHHHHHHhh
Confidence 367899999999999999999999999999999999998887766543 2 4778899999999999999999999
Q ss_pred cCCccEEEEcccCCCC
Q 030706 157 LKYVDIWVFMSDLHSS 172 (173)
Q Consensus 157 ~g~id~lVn~AG~~~~ 172 (173)
|..+++||||||+..+
T Consensus 76 ~P~lNvliNNAGIqr~ 91 (245)
T COG3967 76 YPNLNVLINNAGIQRN 91 (245)
T ss_pred CCchheeeecccccch
Confidence 9999999999999864
No 8
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.80 E-value=1e-18 Score=136.84 Aligned_cols=97 Identities=34% Similarity=0.403 Sum_probs=87.2
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
..+.||+++|||+++|||+++|+.|++.|++|++++|+.+..++...++..... ..++..+.||+++++++++++++..
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 458999999999999999999999999999999999999998888887765432 3479999999999999999999999
Q ss_pred Hh-cCCccEEEEcccCCCC
Q 030706 155 KN-LKYVDIWVFMSDLHSS 172 (173)
Q Consensus 155 ~~-~g~id~lVn~AG~~~~ 172 (173)
++ +|+||+||||||....
T Consensus 84 ~~~~GkidiLvnnag~~~~ 102 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGALGL 102 (270)
T ss_pred HHhCCCCCEEEEcCCcCCC
Confidence 98 7999999999998763
No 9
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1.7e-18 Score=134.50 Aligned_cols=95 Identities=33% Similarity=0.492 Sum_probs=85.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++...++..++.++.+|++|.++++++++++.+.
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR 84 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 46799999999999999999999999999999999998888877777766544447888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|+||||||+..
T Consensus 85 ~g~id~li~~Ag~~~ 99 (265)
T PRK07062 85 FGGVDMLVNNAGQGR 99 (265)
T ss_pred cCCCCEEEECCCCCC
Confidence 999999999999854
No 10
>PRK06720 hypothetical protein; Provisional
Probab=99.78 E-value=6e-18 Score=123.99 Aligned_cols=93 Identities=18% Similarity=0.253 Sum_probs=82.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++||||++|||+++++.|++.|++|++++++.+..++..+++... +. ++.++.+|+++.++++++++++.+.
T Consensus 13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~v~~~v~~~~~~ 90 (169)
T PRK06720 13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL-GG-EALFVSYDMEKQGDWQRVISITLNA 90 (169)
T ss_pred ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999887776666666533 32 4778899999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|++|||||+..
T Consensus 91 ~G~iDilVnnAG~~~ 105 (169)
T PRK06720 91 FSRIDMLFQNAGLYK 105 (169)
T ss_pred cCCCCEEEECCCcCC
Confidence 999999999999875
No 11
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.78 E-value=4.5e-18 Score=132.54 Aligned_cols=93 Identities=26% Similarity=0.358 Sum_probs=81.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++....+. ++.++.+|++|+++++++++++. +
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~~-~ 82 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNV-DVSYIVADLTKREDLERTVKELK-N 82 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEecCCCHHHHHHHHHHHH-h
Confidence 378999999999999999999999999999999999988877777776554332 68889999999999999999985 6
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|+||||||+..
T Consensus 83 ~g~iD~lv~nag~~~ 97 (263)
T PRK08339 83 IGEPDIFFFSTGGPK 97 (263)
T ss_pred hCCCcEEEECCCCCC
Confidence 899999999999753
No 12
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.78 E-value=5.3e-18 Score=131.45 Aligned_cols=94 Identities=26% Similarity=0.397 Sum_probs=83.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+++.......++.++.+|++|+++++++++++.+.+
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 67899999999999999999999999999999999988888777777653223368899999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
|++|+||||||+..
T Consensus 85 g~id~li~~ag~~~ 98 (260)
T PRK07063 85 GPLDVLVNNAGINV 98 (260)
T ss_pred CCCcEEEECCCcCC
Confidence 99999999999753
No 13
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.78 E-value=4.9e-18 Score=131.24 Aligned_cols=93 Identities=29% Similarity=0.346 Sum_probs=83.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++||||++|||++++++|+++|++|++++|+++..++..+++..... ++.++.+|++|+++++++++++.++
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGG--EAVALAGDVRDEAYAKALVALAVER 80 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 36789999999999999999999999999999999998888777777665432 5888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|+||||||+..
T Consensus 81 ~~~id~li~~ag~~~ 95 (254)
T PRK07478 81 FGGLDIAFNNAGTLG 95 (254)
T ss_pred cCCCCEEEECCCCCC
Confidence 999999999999853
No 14
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.78 E-value=2.4e-18 Score=133.24 Aligned_cols=91 Identities=18% Similarity=0.291 Sum_probs=77.0
Q ss_pred CCCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA 153 (173)
Q Consensus 76 ~~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 153 (173)
.++++|+++||||+ +|||++++++|+++|++|++++|+. ..++..+++. . .++.++++|++|+++++++++++
T Consensus 3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~---~-~~~~~~~~Dl~~~~~v~~~~~~~ 77 (252)
T PRK06079 3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV---D-EEDLLVECDVASDESIERAFATI 77 (252)
T ss_pred cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc---c-CceeEEeCCCCCHHHHHHHHHHH
Confidence 34789999999999 8999999999999999999999973 3333333332 2 25788999999999999999999
Q ss_pred HHhcCCccEEEEcccCCC
Q 030706 154 QKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 154 ~~~~g~id~lVn~AG~~~ 171 (173)
.+++|++|+||||||+..
T Consensus 78 ~~~~g~iD~lv~nAg~~~ 95 (252)
T PRK06079 78 KERVGKIDGIVHAIAYAK 95 (252)
T ss_pred HHHhCCCCEEEEcccccc
Confidence 999999999999999864
No 15
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.78 E-value=6e-18 Score=134.42 Aligned_cols=96 Identities=16% Similarity=0.228 Sum_probs=84.5
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
..+.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+++....+..++.++.+|++|.++++++++++.+
T Consensus 12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 34788999999999999999999999999999999999887777666666543334688899999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.++++|+||||||+..
T Consensus 92 ~~~~iD~li~nAg~~~ 107 (306)
T PRK06197 92 AYPRIDLLINNAGVMY 107 (306)
T ss_pred hCCCCCEEEECCcccc
Confidence 9999999999999754
No 16
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.78 E-value=4.9e-18 Score=129.89 Aligned_cols=92 Identities=13% Similarity=0.208 Sum_probs=82.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.+|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++..... ++..+.+|++|+++++++++++.+.
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTD--NVYSFQLKDFSQESIRHLFDAIEQQ 79 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC--CeEEEEccCCCHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999888887777765432 4778899999999999999999999
Q ss_pred cC-CccEEEEcccCC
Q 030706 157 LK-YVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g-~id~lVn~AG~~ 170 (173)
+| +||+||||||..
T Consensus 80 ~g~~iD~li~nag~~ 94 (227)
T PRK08862 80 FNRAPDVLVNNWTSS 94 (227)
T ss_pred hCCCCCEEEECCccC
Confidence 98 999999999854
No 17
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.78 E-value=1.7e-18 Score=129.54 Aligned_cols=95 Identities=25% Similarity=0.330 Sum_probs=84.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.||++++||+.||||++++++|++.|..+.+++.+.+. .+..++|++..+..++.|++|||++..++++.++++.+.
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~ 80 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT 80 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999887777766665 345667777777789999999999999999999999999
Q ss_pred cCCccEEEEcccCCCC
Q 030706 157 LKYVDIWVFMSDLHSS 172 (173)
Q Consensus 157 ~g~id~lVn~AG~~~~ 172 (173)
||.||++||+||+.-.
T Consensus 81 fg~iDIlINgAGi~~d 96 (261)
T KOG4169|consen 81 FGTIDILINGAGILDD 96 (261)
T ss_pred hCceEEEEcccccccc
Confidence 9999999999999743
No 18
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.78 E-value=6.4e-18 Score=130.59 Aligned_cols=93 Identities=26% Similarity=0.372 Sum_probs=83.2
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|++|||||++|||+++++.|+++|++|++++|+.+..++..+++.... .++.++.+|++|+++++++++++.+.
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSG--GKVVPVCCDVSQHQQVTSMLDQVTAE 83 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999999888777777766543 25888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|+||||||+..
T Consensus 84 ~g~id~lv~~ag~~~ 98 (253)
T PRK05867 84 LGGIDIAVCNAGIIT 98 (253)
T ss_pred hCCCCEEEECCCCCC
Confidence 999999999999864
No 19
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.77 E-value=6.6e-18 Score=132.51 Aligned_cols=92 Identities=33% Similarity=0.469 Sum_probs=82.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... + .++.++.+|++|+++++++++++.+.+
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~-~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE-G-FDVHGVMCDVRHREEVTHLADEAFRLL 81 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999999988877777776543 2 258889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
|++|+||||||+..
T Consensus 82 g~id~li~nAg~~~ 95 (275)
T PRK05876 82 GHVDVVFSNAGIVV 95 (275)
T ss_pred CCCCEEEECCCcCC
Confidence 99999999999854
No 20
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.77 E-value=5e-18 Score=132.96 Aligned_cols=93 Identities=19% Similarity=0.290 Sum_probs=76.8
Q ss_pred CCCCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA 153 (173)
Q Consensus 76 ~~~~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 153 (173)
.++++|++|||||++ |||+++|+.|+++|++|++++|+....+. .+++....+. ..++++|++|.++++++++++
T Consensus 3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~--~~~~~~Dv~d~~~v~~~~~~~ 79 (271)
T PRK06505 3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGS--DFVLPCDVEDIASVDAVFEAL 79 (271)
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCC--ceEEeCCCCCHHHHHHHHHHH
Confidence 457899999999996 99999999999999999999987543322 3444333232 356899999999999999999
Q ss_pred HHhcCCccEEEEcccCCC
Q 030706 154 QKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 154 ~~~~g~id~lVn~AG~~~ 171 (173)
.+++|++|+||||||+..
T Consensus 80 ~~~~g~iD~lVnnAG~~~ 97 (271)
T PRK06505 80 EKKWGKLDFVVHAIGFSD 97 (271)
T ss_pred HHHhCCCCEEEECCccCC
Confidence 999999999999999864
No 21
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.77 E-value=8e-18 Score=135.40 Aligned_cols=93 Identities=26% Similarity=0.378 Sum_probs=83.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..... ++.++.+|++|.++++++++++.+.
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~--~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGA--EVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 36789999999999999999999999999999999999888888777765422 5888899999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|++|||||+..
T Consensus 82 ~g~iD~lVnnAG~~~ 96 (330)
T PRK06139 82 GGRIDVWVNNVGVGA 96 (330)
T ss_pred cCCCCEEEECCCcCC
Confidence 999999999999754
No 22
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.77 E-value=1.2e-17 Score=132.24 Aligned_cols=95 Identities=27% Similarity=0.404 Sum_probs=84.1
Q ss_pred CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
..++.+|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++..... ++.++.+|++|.++++++++++.
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~--~~~~~~~Dl~d~~~v~~~~~~~~ 112 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGG--DAMAVPCDLSDLDAVDALVADVE 112 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHH
Confidence 4557889999999999999999999999999999999998887777776654322 57889999999999999999999
Q ss_pred HhcCCccEEEEcccCCC
Q 030706 155 KNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~~ 171 (173)
+.+|++|+||||||+..
T Consensus 113 ~~~g~id~li~~AG~~~ 129 (293)
T PRK05866 113 KRIGGVDILINNAGRSI 129 (293)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 99999999999999864
No 23
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.77 E-value=7.9e-18 Score=130.71 Aligned_cols=93 Identities=19% Similarity=0.355 Sum_probs=80.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
.+++|+++||||++|||+++++.|++.|++|+++++ +.+..+...+++....+. ++.++.+|++|+++++++++++.+
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGI-KAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHH
Confidence 378999999999999999999999999999998875 455566666666544333 688999999999999999999999
Q ss_pred hcCCccEEEEcccCC
Q 030706 156 NLKYVDIWVFMSDLH 170 (173)
Q Consensus 156 ~~g~id~lVn~AG~~ 170 (173)
.+|++|+||||||+.
T Consensus 84 ~~g~id~lv~nAg~~ 98 (260)
T PRK08416 84 DFDRVDFFISNAIIS 98 (260)
T ss_pred hcCCccEEEECcccc
Confidence 999999999999875
No 24
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.77 E-value=8.8e-18 Score=130.51 Aligned_cols=93 Identities=17% Similarity=0.185 Sum_probs=76.5
Q ss_pred CCCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA 153 (173)
Q Consensus 76 ~~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 153 (173)
..+++|++|||||+ +|||++++++|+++|++|++++|+.+.. +..+++.+..+ .+.++.+|++|+++++++++++
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~ 82 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEELD--APIFLPLDVREPGQLEAVFARI 82 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhhc--cceEEecCcCCHHHHHHHHHHH
Confidence 34789999999998 5999999999999999999999976432 22333433322 3567899999999999999999
Q ss_pred HHhcCCccEEEEcccCCC
Q 030706 154 QKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 154 ~~~~g~id~lVn~AG~~~ 171 (173)
.+.+|++|+||||||+..
T Consensus 83 ~~~~g~ld~lv~nAg~~~ 100 (258)
T PRK07533 83 AEEWGRLDFLLHSIAFAP 100 (258)
T ss_pred HHHcCCCCEEEEcCccCC
Confidence 999999999999999853
No 25
>PRK08589 short chain dehydrogenase; Validated
Probab=99.77 E-value=1e-17 Score=131.07 Aligned_cols=91 Identities=23% Similarity=0.357 Sum_probs=81.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|++|||||++|||+++++.|+++|++|++++|+ +..++..+++.+. + .++.++.+|++|+++++++++++.+.+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN-G-GKAKAYHVDISDEQQVKDFASEIKEQF 80 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc-C-CeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 678999999999999999999999999999999998 6666766666543 2 258889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
|++|+||||||+..
T Consensus 81 g~id~li~~Ag~~~ 94 (272)
T PRK08589 81 GRVDVLFNNAGVDN 94 (272)
T ss_pred CCcCEEEECCCCCC
Confidence 99999999999864
No 26
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.77 E-value=6.8e-18 Score=131.70 Aligned_cols=91 Identities=20% Similarity=0.339 Sum_probs=77.5
Q ss_pred CCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
+++|+++||||++ |||+++++.|+++|++|++++|+. ..++..+++....+ .+.++.+|++|+++++++++++.+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~ 80 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG--SDIVLPCDVAEDASIDAMFAELGK 80 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccC--CceEeecCCCCHHHHHHHHHHHHh
Confidence 6789999999986 999999999999999999999873 44455556654433 356789999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.+|++|+||||||+..
T Consensus 81 ~~g~iD~linnAg~~~ 96 (262)
T PRK07984 81 VWPKFDGFVHSIGFAP 96 (262)
T ss_pred hcCCCCEEEECCccCC
Confidence 9999999999999753
No 27
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.77 E-value=8.9e-18 Score=132.47 Aligned_cols=93 Identities=23% Similarity=0.312 Sum_probs=80.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh---------hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA---------ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVA 147 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~ 147 (173)
++++|++|||||++|||+++++.|++.|++|++++++. +..++..+++... + .++.++.+|++|+++++
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dv~~~~~v~ 80 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-G-GEAVANGDDIADWDGAA 80 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-C-CceEEEeCCCCCHHHHH
Confidence 36789999999999999999999999999999998765 5566666666543 2 25788899999999999
Q ss_pred HHHHHHHHhcCCccEEEEcccCCC
Q 030706 148 DLVAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 148 ~~~~~~~~~~g~id~lVn~AG~~~ 171 (173)
++++++.+.+|++|+||||||+..
T Consensus 81 ~~~~~~~~~~g~id~lv~nAG~~~ 104 (286)
T PRK07791 81 NLVDAAVETFGGLDVLVNNAGILR 104 (286)
T ss_pred HHHHHHHHhcCCCCEEEECCCCCC
Confidence 999999999999999999999864
No 28
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.76 E-value=1.2e-17 Score=133.05 Aligned_cols=91 Identities=24% Similarity=0.275 Sum_probs=77.7
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh----------hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA----------ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEV 146 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v 146 (173)
.+++|+++||||++|||+++++.|++.|++|++++|+. +..++..+++... +. ++.++.+|++|++++
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~Dv~~~~~v 82 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA-GG-RGIAVQVDHLVPEQV 82 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc-CC-ceEEEEcCCCCHHHH
Confidence 36799999999999999999999999999999999973 3344445555433 32 577899999999999
Q ss_pred HHHHHHHHHhcCCccEEEEcc-cC
Q 030706 147 ADLVAFAQKNLKYVDIWVFMS-DL 169 (173)
Q Consensus 147 ~~~~~~~~~~~g~id~lVn~A-G~ 169 (173)
+++++++.+.+|+||+||||| |+
T Consensus 83 ~~~~~~~~~~~g~iDilVnnA~g~ 106 (305)
T PRK08303 83 RALVERIDREQGRLDILVNDIWGG 106 (305)
T ss_pred HHHHHHHHHHcCCccEEEECCccc
Confidence 999999999999999999999 85
No 29
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.76 E-value=1.2e-17 Score=130.07 Aligned_cols=91 Identities=22% Similarity=0.336 Sum_probs=76.3
Q ss_pred CCCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 78 LPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa--~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
+++|+++|||| ++|||+++|+.|+++|++|++++|+. ..++..+++....+. ...+++|++|+++++++++++.+
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~ 80 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDS--ELVFRCDVASDDEINQVFADLGK 80 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCC--ceEEECCCCCHHHHHHHHHHHHH
Confidence 67899999997 67999999999999999999988763 334445555443332 45789999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
++|++|+||||||+..
T Consensus 81 ~~g~iD~lVnnAG~~~ 96 (261)
T PRK08690 81 HWDGLDGLVHSIGFAP 96 (261)
T ss_pred HhCCCcEEEECCccCC
Confidence 9999999999999864
No 30
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.76 E-value=1.7e-17 Score=130.18 Aligned_cols=91 Identities=22% Similarity=0.345 Sum_probs=75.9
Q ss_pred CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 78 LPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
+.+|++|||||+ +|||+++++.|+++|++|++++|+.+ .++..+++....+. . .++++|++|.++++++++++.+
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHHHH
Confidence 578999999997 89999999999999999999999853 23334444433333 3 5689999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
++|++|+||||||+..
T Consensus 80 ~~g~iDilVnnAG~~~ 95 (274)
T PRK08415 80 DLGKIDFIVHSVAFAP 95 (274)
T ss_pred HcCCCCEEEECCccCc
Confidence 9999999999999853
No 31
>PLN02253 xanthoxin dehydrogenase
Probab=99.75 E-value=2.9e-17 Score=128.66 Aligned_cols=93 Identities=29% Similarity=0.394 Sum_probs=80.8
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
..+.+|+++||||++|||++++++|+++|++|++++++.+..++..+++. ...++.++++|++|.++++++++++.+
T Consensus 14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 90 (280)
T PLN02253 14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG---GEPNVCFFHCDVTVEDDVSRAVDFTVD 90 (280)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---CCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 34779999999999999999999999999999999998766665555542 123688999999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.+|++|+||||||+..
T Consensus 91 ~~g~id~li~~Ag~~~ 106 (280)
T PLN02253 91 KFGTLDIMVNNAGLTG 106 (280)
T ss_pred HhCCCCEEEECCCcCC
Confidence 9999999999999863
No 32
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.75 E-value=2.6e-17 Score=132.59 Aligned_cols=93 Identities=25% Similarity=0.413 Sum_probs=83.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+. ++.++.+|++|+++++++++++.+.
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~--~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGG--EALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC--cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999998888877777765432 5888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|++|||||+..
T Consensus 83 ~g~iD~lInnAg~~~ 97 (334)
T PRK07109 83 LGPIDTWVNNAMVTV 97 (334)
T ss_pred CCCCCEEEECCCcCC
Confidence 999999999999753
No 33
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.75 E-value=1.6e-17 Score=129.16 Aligned_cols=94 Identities=14% Similarity=0.262 Sum_probs=76.1
Q ss_pred CCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 77 ~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
.+.+|+++||||+ +|||+++++.|+++|++|++++|+... ++..+++.+.....++.++++|++|+++++++++++.
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK 82 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence 3678999999997 899999999999999999999875322 1222333332222368889999999999999999999
Q ss_pred HhcCCccEEEEcccCCC
Q 030706 155 KNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~~ 171 (173)
+++|++|+||||||+..
T Consensus 83 ~~~g~ld~lv~nag~~~ 99 (257)
T PRK08594 83 EEVGVIHGVAHCIAFAN 99 (257)
T ss_pred HhCCCccEEEECcccCC
Confidence 99999999999999753
No 34
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.75 E-value=2.1e-17 Score=127.87 Aligned_cols=91 Identities=18% Similarity=0.264 Sum_probs=77.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++||||++|||++++++|+++|++|++++|+.. ++..+++... + .++.++.+|++|+++++++++++.+.
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL-G-RKFHFITADLIQQKDIDSIVSQAVEV 80 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc-C-CeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999988642 2333334332 2 36888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|+||||||+..
T Consensus 81 ~g~iD~lv~~ag~~~ 95 (251)
T PRK12481 81 MGHIDILINNAGIIR 95 (251)
T ss_pred cCCCCEEEECCCcCC
Confidence 999999999999864
No 35
>PRK09186 flagellin modification protein A; Provisional
Probab=99.75 E-value=2.4e-17 Score=127.19 Aligned_cols=94 Identities=26% Similarity=0.322 Sum_probs=82.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
|+++|+++||||++|||+++++.|+++|++|++++|+.+..++...++....+...+.++.+|++|+++++++++++.+.
T Consensus 1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 80 (256)
T PRK09186 1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK 80 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999998887777777654433335667799999999999999999999
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
++++|+||||||..
T Consensus 81 ~~~id~vi~~A~~~ 94 (256)
T PRK09186 81 YGKIDGAVNCAYPR 94 (256)
T ss_pred cCCccEEEECCccc
Confidence 99999999999753
No 36
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.75 E-value=3.1e-17 Score=129.96 Aligned_cols=92 Identities=20% Similarity=0.277 Sum_probs=80.9
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.. ..++..+.+|++|.++++++++++.+.
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999998877766665532 235777889999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|+||||||+..
T Consensus 83 ~g~id~vI~nAG~~~ 97 (296)
T PRK05872 83 FGGIDVVVANAGIAS 97 (296)
T ss_pred cCCCCEEEECCCcCC
Confidence 999999999999853
No 37
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.75 E-value=3.4e-17 Score=127.28 Aligned_cols=89 Identities=25% Similarity=0.289 Sum_probs=78.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++ + .++.++.+|++|+++++++++++.+.+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----G-ERARFIATDITDDAAIERAVATVVARF 78 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C-CeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 67899999999999999999999999999999999877665554443 2 268889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||+..
T Consensus 79 g~id~lv~~ag~~~ 92 (261)
T PRK08265 79 GRVDILVNLACTYL 92 (261)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999999753
No 38
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.75 E-value=2.4e-17 Score=128.23 Aligned_cols=91 Identities=22% Similarity=0.283 Sum_probs=76.2
Q ss_pred CCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
+++|+++||||++ |||+++++.|+++|++|++++|+. ..++..+++....+. ..++++|++|+++++++++++.+
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~--~~~~~~Dv~~~~~v~~~~~~~~~ 82 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC--NFVSELDVTNPKSISNLFDDIKE 82 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC--ceEEEccCCCHHHHHHHHHHHHH
Confidence 6789999999997 999999999999999999999874 334445555444332 34678999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
++|++|+||||||+..
T Consensus 83 ~~g~iDilVnnag~~~ 98 (260)
T PRK06603 83 KWGSFDFLLHGMAFAD 98 (260)
T ss_pred HcCCccEEEEccccCC
Confidence 9999999999999753
No 39
>PRK05599 hypothetical protein; Provisional
Probab=99.75 E-value=2.5e-17 Score=127.14 Aligned_cols=89 Identities=20% Similarity=0.256 Sum_probs=79.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
|+++||||++|||++++++|+ +|++|++++|+.+.+++..+++.+.++. .+.++.+|++|+++++++++++.+.+|++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGAT-SVHVLSFDAQDLDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCC-ceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence 479999999999999999999 5999999999998888888887654332 57889999999999999999999999999
Q ss_pred cEEEEcccCCC
Q 030706 161 DIWVFMSDLHS 171 (173)
Q Consensus 161 d~lVn~AG~~~ 171 (173)
|++|||||+..
T Consensus 79 d~lv~nag~~~ 89 (246)
T PRK05599 79 SLAVVAFGILG 89 (246)
T ss_pred CEEEEecCcCC
Confidence 99999999864
No 40
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.74 E-value=4.7e-17 Score=125.88 Aligned_cols=93 Identities=18% Similarity=0.284 Sum_probs=80.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
.+++|+++||||++|||++++++|+++|++|++++|+.+ ..++..+++... + .++.++.+|++|+++++++++++.+
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-G-RRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-C-CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999998754 345555666543 2 2578889999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.+|++|+||||||+..
T Consensus 83 ~~g~id~li~~ag~~~ 98 (254)
T PRK06114 83 ELGALTLAVNAAGIAN 98 (254)
T ss_pred HcCCCCEEEECCCCCC
Confidence 9999999999999864
No 41
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.74 E-value=4.1e-17 Score=129.88 Aligned_cols=94 Identities=22% Similarity=0.293 Sum_probs=80.5
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
..+++|+++||||++|||++++++|+++|++|+++++.. +..++..+++... + .++.++.+|++|.++++++++++.
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~-g-~~~~~~~~Dv~d~~~~~~~~~~~~ 85 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA-G-AKAVAVAGDISQRATADELVATAV 85 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc-C-CeEEEEeCCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999998753 4455666666543 3 268899999999999999999999
Q ss_pred HhcCCccEEEEcccCCCC
Q 030706 155 KNLKYVDIWVFMSDLHSS 172 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~~~ 172 (173)
+ +|++|+||||||+..+
T Consensus 86 ~-~g~iD~li~nAG~~~~ 102 (306)
T PRK07792 86 G-LGGLDIVVNNAGITRD 102 (306)
T ss_pred H-hCCCCEEEECCCCCCC
Confidence 8 9999999999998653
No 42
>PRK06194 hypothetical protein; Provisional
Probab=99.74 E-value=4.1e-17 Score=128.15 Aligned_cols=92 Identities=25% Similarity=0.378 Sum_probs=81.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++... + .++.++.+|++|.++++++++++.+.+
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-G-AEVLGVRTDVSDAAQVEALADAALERF 81 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56799999999999999999999999999999999887777766666543 2 268889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
|++|+||||||+..
T Consensus 82 g~id~vi~~Ag~~~ 95 (287)
T PRK06194 82 GAVHLLFNNAGVGA 95 (287)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999999865
No 43
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.74 E-value=5.6e-17 Score=124.72 Aligned_cols=92 Identities=23% Similarity=0.411 Sum_probs=82.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
+|+++||||++|||++++++|+++|++|++++|+.+..++...++....++.++.++.+|++|+++++++++++.+.+++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999998887777766665443447899999999999999999999999999
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|++|||||+..
T Consensus 82 id~vi~~ag~~~ 93 (248)
T PRK08251 82 LDRVIVNAGIGK 93 (248)
T ss_pred CCEEEECCCcCC
Confidence 999999999864
No 44
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.74 E-value=4.7e-17 Score=125.71 Aligned_cols=92 Identities=26% Similarity=0.380 Sum_probs=81.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|+++||||++|||++++++|+++|++|++++|+++..++...++.... .++.++.+|++|+++++++++++.+.+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLG--RRALAVPTDITDEDQCANLVALALERF 80 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhC--CceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 678999999999999999999999999999999999877777666665432 258889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
|++|+||||||...
T Consensus 81 g~~d~vi~~ag~~~ 94 (258)
T PRK07890 81 GRVDALVNNAFRVP 94 (258)
T ss_pred CCccEEEECCccCC
Confidence 99999999999753
No 45
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.74 E-value=5.8e-17 Score=125.23 Aligned_cols=93 Identities=30% Similarity=0.457 Sum_probs=82.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.+|++|||||++|||++++++|+++|++|++++|+.+..++..+++.... .++.++.+|++|+++++++++++.+.
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEG--IKAHAAPFNVTHKQEVEAAIEHIEKD 83 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEecCCCCHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999999999999887777777765432 25788899999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||+..
T Consensus 84 ~~~id~vi~~ag~~~ 98 (254)
T PRK08085 84 IGPIDVLINNAGIQR 98 (254)
T ss_pred cCCCCEEEECCCcCC
Confidence 999999999999753
No 46
>PRK09242 tropinone reductase; Provisional
Probab=99.74 E-value=8.1e-17 Score=124.61 Aligned_cols=94 Identities=34% Similarity=0.520 Sum_probs=84.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.+|+++|||+++|||+++++.|+++|++|++++|+.+..++..+++....+..++.++.+|++++++++++++++.+.
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH 85 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999998887777777765543447889999999999999999999999
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
++++|+||||||+.
T Consensus 86 ~g~id~li~~ag~~ 99 (257)
T PRK09242 86 WDGLHILVNNAGGN 99 (257)
T ss_pred cCCCCEEEECCCCC
Confidence 99999999999974
No 47
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.73 E-value=1.1e-16 Score=124.24 Aligned_cols=96 Identities=29% Similarity=0.407 Sum_probs=83.8
Q ss_pred CCCCCCEEEEEcCCc-hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTK-GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 76 ~~~~~k~~lItGa~~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
..+.+|+++||||+| |||+++++.|+++|++|++++|+.+..++..+++....+..++.++++|++++++++++++++.
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 346789999999985 9999999999999999999999888777777777654443368889999999999999999999
Q ss_pred HhcCCccEEEEcccCCC
Q 030706 155 KNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~~ 171 (173)
+.+|++|+||||||+..
T Consensus 93 ~~~g~id~li~~ag~~~ 109 (262)
T PRK07831 93 ERLGRLDVLVNNAGLGG 109 (262)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 99999999999999753
No 48
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.73 E-value=4.2e-17 Score=127.80 Aligned_cols=91 Identities=20% Similarity=0.337 Sum_probs=75.4
Q ss_pred CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 78 LPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
+.+|++|||||+ +|||+++|+.|+++|++|++++|+.. ..+..+++.+..+. ...+++|++|+++++++++++.+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~--~~~~~~Dl~~~~~v~~~~~~~~~ 84 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGA--FVAGHCDVTDEASIDAVFETLEK 84 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCC--ceEEecCCCCHHHHHHHHHHHHH
Confidence 678999999997 89999999999999999999988632 23334444433332 55689999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
++|++|+||||||+..
T Consensus 85 ~~g~iD~lv~nAG~~~ 100 (272)
T PRK08159 85 KWGKLDFVVHAIGFSD 100 (272)
T ss_pred hcCCCcEEEECCcccC
Confidence 9999999999999863
No 49
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.73 E-value=4.3e-17 Score=118.14 Aligned_cols=89 Identities=31% Similarity=0.456 Sum_probs=79.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecC--hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS--AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
|+++||||++|||++++++|+++|+ .|++++|+ .+..++...++...+ .++.++++|++++++++++++++.+.+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG--AKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT--SEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence 6899999999999999999999965 78889998 566677777776443 479999999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||+..
T Consensus 79 ~~ld~li~~ag~~~ 92 (167)
T PF00106_consen 79 GPLDILINNAGIFS 92 (167)
T ss_dssp SSESEEEEECSCTT
T ss_pred cccccccccccccc
Confidence 99999999999876
No 50
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.73 E-value=8.3e-17 Score=124.20 Aligned_cols=93 Identities=27% Similarity=0.366 Sum_probs=82.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++|||+++|||.+++++|+++|++|++++|+.+..++..+++... + .++.++.+|++|.++++++++++.+.
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~i~~~~~~~~~~ 81 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA-G-GEALFVACDVTRDAEVKALVEQTIAA 81 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999988777777666543 2 25888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|+||||||+..
T Consensus 82 ~g~id~li~~ag~~~ 96 (253)
T PRK06172 82 YGRLDYAFNNAGIEI 96 (253)
T ss_pred hCCCCEEEECCCCCC
Confidence 999999999999753
No 51
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.73 E-value=5.6e-17 Score=125.96 Aligned_cols=89 Identities=31% Similarity=0.390 Sum_probs=78.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++ +. ++.++.+|++|.++++++++++.+.
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----GD-HVLVVEGDVTSYADNQRAVDQTVDA 77 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-cceEEEccCCCHHHHHHHHHHHHHh
Confidence 367899999999999999999999999999999999887665544433 22 5788899999999999999999999
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
+|++|+||||||+.
T Consensus 78 ~g~id~li~~ag~~ 91 (263)
T PRK06200 78 FGKLDCFVGNAGIW 91 (263)
T ss_pred cCCCCEEEECCCCc
Confidence 99999999999975
No 52
>PRK05717 oxidoreductase; Validated
Probab=99.73 E-value=6.2e-17 Score=125.19 Aligned_cols=92 Identities=25% Similarity=0.365 Sum_probs=79.2
Q ss_pred CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
..++++|+++||||++|||++++++|+++|++|++++++.+..++..+++ + .++.++.+|++|.++++++++++.
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~~~~~~~~~~ 79 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL----G-ENAWFIAMDVADEAQVAAGVAEVL 79 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc----C-CceEEEEccCCCHHHHHHHHHHHH
Confidence 45588999999999999999999999999999999998876554443322 2 257889999999999999999999
Q ss_pred HhcCCccEEEEcccCCC
Q 030706 155 KNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~~ 171 (173)
+.+|++|+||||||+..
T Consensus 80 ~~~g~id~li~~ag~~~ 96 (255)
T PRK05717 80 GQFGRLDALVCNAAIAD 96 (255)
T ss_pred HHhCCCCEEEECCCccc
Confidence 99999999999999864
No 53
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.73 E-value=8.3e-17 Score=125.24 Aligned_cols=94 Identities=32% Similarity=0.485 Sum_probs=83.4
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
+.+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+.+... + .++.++.+|++|+++++++++++.+
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL-G-IEAHGYVCDVTDEDGVQAMVSQIEK 83 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-C-CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3478899999999999999999999999999999999988777776666543 2 2588899999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.++++|+||||||+..
T Consensus 84 ~~~~id~li~~ag~~~ 99 (265)
T PRK07097 84 EVGVIDILVNNAGIIK 99 (265)
T ss_pred hCCCCCEEEECCCCCC
Confidence 9999999999999864
No 54
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.73 E-value=5.9e-17 Score=129.64 Aligned_cols=92 Identities=24% Similarity=0.231 Sum_probs=80.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+++... ..++.++.+|++|.++++++++++.+.+
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRALG 81 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 56899999999999999999999999999999999988777776666422 2358889999999999999999988877
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||+..
T Consensus 82 ~~iD~li~nAg~~~ 95 (322)
T PRK07453 82 KPLDALVCNAAVYM 95 (322)
T ss_pred CCccEEEECCcccC
Confidence 89999999999753
No 55
>PRK06128 oxidoreductase; Provisional
Probab=99.73 E-value=3.1e-16 Score=124.40 Aligned_cols=92 Identities=28% Similarity=0.342 Sum_probs=77.7
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh--hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE--RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
.+.+|++|||||++|||+++++.|+++|++|++++++.+ ..++..+.+... +. ++.++.+|++|.++++++++++.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~v~~~~~~~~ 129 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-GR-KAVALPGDLKDEAFCRQLVERAV 129 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc-CC-eEEEEecCCCCHHHHHHHHHHHH
Confidence 478899999999999999999999999999999887543 334444444433 32 68889999999999999999999
Q ss_pred HhcCCccEEEEcccCC
Q 030706 155 KNLKYVDIWVFMSDLH 170 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~ 170 (173)
+.+|++|+||||||+.
T Consensus 130 ~~~g~iD~lV~nAg~~ 145 (300)
T PRK06128 130 KELGGLDILVNIAGKQ 145 (300)
T ss_pred HHhCCCCEEEECCccc
Confidence 9999999999999975
No 56
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.73 E-value=1.3e-16 Score=123.34 Aligned_cols=95 Identities=26% Similarity=0.380 Sum_probs=83.9
Q ss_pred CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
+..+++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++... +. ++.++.+|++|++++.++++++.
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~ 83 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA-GG-AAEALAFDIADEEAVAAAFARID 83 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc-CC-ceEEEEccCCCHHHHHHHHHHHH
Confidence 44578999999999999999999999999999999999987777776666543 22 58889999999999999999999
Q ss_pred HhcCCccEEEEcccCCC
Q 030706 155 KNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~~ 171 (173)
+.++++|+||||||...
T Consensus 84 ~~~~~id~vi~~ag~~~ 100 (256)
T PRK06124 84 AEHGRLDILVNNVGARD 100 (256)
T ss_pred HhcCCCCEEEECCCCCC
Confidence 99999999999999754
No 57
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.73 E-value=3.4e-17 Score=120.09 Aligned_cols=93 Identities=22% Similarity=0.298 Sum_probs=82.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
++..|+++||||++|||++++..|++.|++|++.+++....++....|... .+...+.|||++.++++..+++..+.
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~---~~h~aF~~DVS~a~~v~~~l~e~~k~ 87 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY---GDHSAFSCDVSKAHDVQNTLEEMEKS 87 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC---CccceeeeccCcHHHHHHHHHHHHHh
Confidence 367799999999999999999999999999999999888777777666432 24567899999999999999999999
Q ss_pred cCCccEEEEcccCCCC
Q 030706 157 LKYVDIWVFMSDLHSS 172 (173)
Q Consensus 157 ~g~id~lVn~AG~~~~ 172 (173)
+|++++||||||++.+
T Consensus 88 ~g~psvlVncAGItrD 103 (256)
T KOG1200|consen 88 LGTPSVLVNCAGITRD 103 (256)
T ss_pred cCCCcEEEEcCccccc
Confidence 9999999999999865
No 58
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.73 E-value=6.2e-17 Score=125.82 Aligned_cols=92 Identities=22% Similarity=0.346 Sum_probs=76.5
Q ss_pred CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChh--hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706 78 LPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAE--RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA 153 (173)
Q Consensus 78 ~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 153 (173)
+.+|+++||||+ +|||++++++|+++|++|++++++.+ ..++..+++.+... ++.++.+|++|+++++++++++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~v~~~~~~~ 81 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLN--PSLFLPCDVQDDAQIEETFETI 81 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccC--cceEeecCcCCHHHHHHHHHHH
Confidence 678999999986 89999999999999999998876543 33444555544322 4678899999999999999999
Q ss_pred HHhcCCccEEEEcccCCC
Q 030706 154 QKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 154 ~~~~g~id~lVn~AG~~~ 171 (173)
.+++|++|+||||||+..
T Consensus 82 ~~~~g~iD~lv~nag~~~ 99 (258)
T PRK07370 82 KQKWGKLDILVHCLAFAG 99 (258)
T ss_pred HHHcCCCCEEEEcccccC
Confidence 999999999999999863
No 59
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.73 E-value=1.1e-16 Score=123.68 Aligned_cols=92 Identities=29% Similarity=0.469 Sum_probs=82.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|+++||||++|||++++++|+++|++|++++|+++..++..+.+... + .++.++.+|++|+++++++++++.+.+
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-G-LSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C-ceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 67999999999999999999999999999999999988777766666543 2 258889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||...
T Consensus 86 ~~~d~li~~ag~~~ 99 (255)
T PRK07523 86 GPIDILVNNAGMQF 99 (255)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999999864
No 60
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.73 E-value=9.5e-17 Score=125.63 Aligned_cols=92 Identities=24% Similarity=0.311 Sum_probs=82.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+++... +. ++.++++|++|+++++++++++.+.
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-GG-EALAVKADVLDKESLEQARQQILED 84 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999987777777766543 22 6889999999999999999999999
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
++++|+||||||+.
T Consensus 85 ~g~id~li~~ag~~ 98 (278)
T PRK08277 85 FGPCDILINGAGGN 98 (278)
T ss_pred cCCCCEEEECCCCC
Confidence 99999999999965
No 61
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.72 E-value=6e-17 Score=125.73 Aligned_cols=89 Identities=17% Similarity=0.227 Sum_probs=74.7
Q ss_pred CCCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecCh--hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706 78 LPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSA--ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA 153 (173)
Q Consensus 78 ~~~k~~lItGa--~~gIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 153 (173)
+.+|+++|||+ ++|||+++++.|+++|++|++++|+. +..++ +....+. ++.++.+|++|+++++++++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~----~~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~ 79 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTER----IAKRLPE-PAPVLELDVTNEEHLASLADRV 79 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHH----HHHhcCC-CCcEEeCCCCCHHHHHHHHHHH
Confidence 67899999999 89999999999999999999999764 22233 2222222 4678899999999999999999
Q ss_pred HHhcCCccEEEEcccCCC
Q 030706 154 QKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 154 ~~~~g~id~lVn~AG~~~ 171 (173)
.+.+|++|+||||||+..
T Consensus 80 ~~~~g~iD~li~nAG~~~ 97 (256)
T PRK07889 80 REHVDGLDGVVHSIGFAP 97 (256)
T ss_pred HHHcCCCcEEEEcccccc
Confidence 999999999999999863
No 62
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.72 E-value=8.7e-17 Score=124.91 Aligned_cols=88 Identities=24% Similarity=0.351 Sum_probs=76.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|+++||||++|||+++++.|+++|++|++++|+.+..++... ..+. ++.++.+|++|.++++++++++.+.+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~----~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA----AHGD-AVVGVEGDVRSLDDHKEAVARCVAAF 77 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----hcCC-ceEEEEeccCCHHHHHHHHHHHHHHh
Confidence 678999999999999999999999999999999998766554332 2232 58889999999999999999999999
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
|++|+||||||+.
T Consensus 78 g~id~li~~Ag~~ 90 (262)
T TIGR03325 78 GKIDCLIPNAGIW 90 (262)
T ss_pred CCCCEEEECCCCC
Confidence 9999999999975
No 63
>PRK08643 acetoin reductase; Validated
Probab=99.72 E-value=1.1e-16 Score=123.79 Aligned_cols=90 Identities=26% Similarity=0.391 Sum_probs=80.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
+|+++||||++|||+++++.|+++|++|++++|+.+..++...++... + .++.++++|++|+++++++++++.+.+++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-G-GKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999999999987777776666543 2 25888999999999999999999999999
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|+||||||+..
T Consensus 80 id~vi~~ag~~~ 91 (256)
T PRK08643 80 LNVVVNNAGVAP 91 (256)
T ss_pred CCEEEECCCCCC
Confidence 999999999854
No 64
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.72 E-value=1.3e-16 Score=123.07 Aligned_cols=92 Identities=25% Similarity=0.368 Sum_probs=82.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++..... ++.++++|+++.++++++++++.+.
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGG--KAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 47789999999999999999999999999999999998877777777654322 5788899999999999999999999
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
++++|+||||||..
T Consensus 83 ~~~id~li~~ag~~ 96 (252)
T PRK07035 83 HGRLDILVNNAAAN 96 (252)
T ss_pred cCCCCEEEECCCcC
Confidence 99999999999964
No 65
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.72 E-value=1.4e-16 Score=123.89 Aligned_cols=92 Identities=25% Similarity=0.382 Sum_probs=81.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++... + .++.++.+|++++++++++++++.+.+
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA-G-RRAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999999987777766666543 2 258889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||...
T Consensus 86 ~~id~vi~~Ag~~~ 99 (263)
T PRK07814 86 GRLDIVVNNVGGTM 99 (263)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999999753
No 66
>PRK06196 oxidoreductase; Provisional
Probab=99.72 E-value=9.2e-17 Score=128.21 Aligned_cols=89 Identities=18% Similarity=0.259 Sum_probs=78.9
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.+|+++||||++|||+++++.|+++|++|++++|+.+..++..+++. .+.++.+|++|.++++++++++.+.
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~~ 96 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLDS 96 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHhc
Confidence 4678999999999999999999999999999999999877666555542 2678899999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||+..
T Consensus 97 ~~~iD~li~nAg~~~ 111 (315)
T PRK06196 97 GRRIDILINNAGVMA 111 (315)
T ss_pred CCCCCEEEECCCCCC
Confidence 999999999999753
No 67
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.72 E-value=1.1e-16 Score=125.02 Aligned_cols=88 Identities=25% Similarity=0.309 Sum_probs=78.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++++++||||+||||+++++.|+++|++|++++|+++..++...++. ++.++.+|++|+++++++++++.+.+
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHHHc
Confidence 568999999999999999999999999999999998877666544432 36788999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||+..
T Consensus 77 ~~id~li~~ag~~~ 90 (273)
T PRK07825 77 GPIDVLVNNAGVMP 90 (273)
T ss_pred CCCCEEEECCCcCC
Confidence 99999999999864
No 68
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.72 E-value=1.7e-16 Score=122.08 Aligned_cols=93 Identities=18% Similarity=0.309 Sum_probs=80.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++||||+||||.+++++|+++|++|++++|+.+..++..+++... + .++.++.+|++|.++++++++++.+.
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD-G-GTAIAVQVDVSDPDSAKAMADATVSA 80 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999877666666655443 2 24778899999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||+..
T Consensus 81 ~~~id~vi~~ag~~~ 95 (250)
T PRK07774 81 FGGIDYLVNNAAIYG 95 (250)
T ss_pred hCCCCEEEECCCCcC
Confidence 999999999999853
No 69
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.72 E-value=1.7e-16 Score=122.98 Aligned_cols=92 Identities=23% Similarity=0.319 Sum_probs=79.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.+|++|||||++|||++++++|+++|++|++++|+ +..++..+.+... + .++.++.+|+++.++++++++++.+.
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~i~~~~~~~~~~ 88 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE-G-RKVTFVQVDLTKPESAEKVVKEALEE 88 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc-C-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999997 4455554444433 2 25888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|++|||||...
T Consensus 89 ~g~id~li~~ag~~~ 103 (258)
T PRK06935 89 FGKIDILVNNAGTIR 103 (258)
T ss_pred cCCCCEEEECCCCCC
Confidence 999999999999754
No 70
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.72 E-value=1.5e-16 Score=123.12 Aligned_cols=93 Identities=22% Similarity=0.228 Sum_probs=80.8
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
.++++|++|||||++|||++++++|+++|++|++++|+++.. +..+++..... ++.++.+|++++++++++++++.+
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~ 79 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQP--RAEFVQVDLTDDAQCRDAVEQTVA 79 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHH
Confidence 458899999999999999999999999999999999987665 55555544322 588999999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.++++|+||||||...
T Consensus 80 ~~~~id~vi~~ag~~~ 95 (258)
T PRK08628 80 KFGRIDGLVNNAGVND 95 (258)
T ss_pred hcCCCCEEEECCcccC
Confidence 9999999999999753
No 71
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.72 E-value=2.1e-16 Score=122.34 Aligned_cols=92 Identities=18% Similarity=0.325 Sum_probs=81.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
+|++|||||+++||.+++++|+++|++|++++|+....++..+++....+..++.++.+|++|.++++++++++.+.+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999988777776666655443236889999999999999999999999999
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|++|||||...
T Consensus 82 id~vv~~ag~~~ 93 (259)
T PRK12384 82 VDLLVYNAGIAK 93 (259)
T ss_pred CCEEEECCCcCC
Confidence 999999999764
No 72
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.72 E-value=1.1e-16 Score=127.89 Aligned_cols=91 Identities=22% Similarity=0.242 Sum_probs=79.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
.+|+++||||++|||+++++.|+++| ++|++++|+.+..++..+++... ..++.++.+|++|.++++++++++.+.+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP--KDSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 37899999999999999999999999 99999999988777666665422 2357888999999999999999998889
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||+..
T Consensus 80 ~~iD~lI~nAG~~~ 93 (314)
T TIGR01289 80 RPLDALVCNAAVYF 93 (314)
T ss_pred CCCCEEEECCCccc
Confidence 99999999999853
No 73
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.71 E-value=1.7e-16 Score=122.98 Aligned_cols=90 Identities=21% Similarity=0.279 Sum_probs=77.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|+++||||++|||++++++|+++|++|++++|+.. .++..+++... + .++.++.+|++|.++++++++++.+.+
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA-G-GEALALTADLETYAGAQAAMAAAVEAF 82 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc-C-CeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999999753 33444444432 2 258889999999999999999999999
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
+++|+||||||..
T Consensus 83 ~~id~lv~nAg~~ 95 (260)
T PRK12823 83 GRIDVLINNVGGT 95 (260)
T ss_pred CCCeEEEECCccc
Confidence 9999999999964
No 74
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.71 E-value=2.1e-16 Score=123.71 Aligned_cols=93 Identities=28% Similarity=0.415 Sum_probs=78.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-------HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-------VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADL 149 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~ 149 (173)
++.+|+++||||++|||.+++++|+++|++|++++|+.+. .++..+++... +. ++.++.+|+++.++++++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~-~~~~~~~D~~~~~~i~~~ 80 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-GG-QALPLVGDVRDEDQVAAA 80 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-CC-ceEEEEecCCCHHHHHHH
Confidence 3678999999999999999999999999999999997542 23334444432 32 688899999999999999
Q ss_pred HHHHHHhcCCccEEEEcccCCC
Q 030706 150 VAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 150 ~~~~~~~~g~id~lVn~AG~~~ 171 (173)
++++.+.+|++|+||||||+..
T Consensus 81 ~~~~~~~~g~id~li~~ag~~~ 102 (273)
T PRK08278 81 VAKAVERFGGIDICVNNASAIN 102 (273)
T ss_pred HHHHHHHhCCCCEEEECCCCcC
Confidence 9999999999999999999854
No 75
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.71 E-value=1.4e-16 Score=123.63 Aligned_cols=86 Identities=37% Similarity=0.608 Sum_probs=77.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
+++||||++|||++++++|+++|++|++++|+++..++..+++... + ++.++.+|++|+++++++++++.+.+|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~--~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY-G--EVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C--CceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 6999999999999999999999999999999988877777776543 2 478899999999999999999999999999
Q ss_pred EEEEcccCC
Q 030706 162 IWVFMSDLH 170 (173)
Q Consensus 162 ~lVn~AG~~ 170 (173)
+||||||+.
T Consensus 79 ~li~naG~~ 87 (259)
T PRK08340 79 ALVWNAGNV 87 (259)
T ss_pred EEEECCCCC
Confidence 999999975
No 76
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.71 E-value=1.4e-16 Score=123.51 Aligned_cols=89 Identities=24% Similarity=0.353 Sum_probs=77.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
+|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++... . ++.++.+|++|+++++++++++.+.+|.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999999999999987766655544321 1 6889999999999999999999999999
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|+||||||+..
T Consensus 79 id~lv~~ag~~~ 90 (257)
T PRK07024 79 PDVVIANAGISV 90 (257)
T ss_pred CCEEEECCCcCC
Confidence 999999999754
No 77
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.71 E-value=1.3e-16 Score=124.21 Aligned_cols=91 Identities=22% Similarity=0.335 Sum_probs=73.6
Q ss_pred CCCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 78 LPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa--~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
+++|+++|||| ++|||+++++.|+++|++|+++++... .++..+++.+..+. ..++.+|++|+++++++++++.+
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~ 80 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGS--DLVFPCDVASDEQIDALFASLGQ 80 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcCC--cceeeccCCCHHHHHHHHHHHHH
Confidence 67899999996 689999999999999999999876422 22333344333332 34678999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
++|++|+||||||+..
T Consensus 81 ~~g~iD~lvnnAG~~~ 96 (260)
T PRK06997 81 HWDGLDGLVHSIGFAP 96 (260)
T ss_pred HhCCCcEEEEccccCC
Confidence 9999999999999864
No 78
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.71 E-value=2.1e-16 Score=121.98 Aligned_cols=89 Identities=26% Similarity=0.405 Sum_probs=78.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
+|+++||||++|||+++++.|+++|++|++++|+.+..++..+++... + .++.++.+|++|+++++++++++.+.+++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-P-GQVLTVQMDVRNPEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 589999999999999999999999999999999987777666666543 2 26889999999999999999999999999
Q ss_pred ccEEEEcccCC
Q 030706 160 VDIWVFMSDLH 170 (173)
Q Consensus 160 id~lVn~AG~~ 170 (173)
+|+||||||..
T Consensus 79 id~lI~~ag~~ 89 (252)
T PRK07677 79 IDALINNAAGN 89 (252)
T ss_pred ccEEEECCCCC
Confidence 99999999964
No 79
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.71 E-value=2.8e-16 Score=120.86 Aligned_cols=91 Identities=26% Similarity=0.423 Sum_probs=80.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|+++||||+|+||.+++++|+++|++|++++|+.+..++..+++. .+ .++.++.+|++|+++++++++++.+.+
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--AG-GRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--cC-CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 678999999999999999999999999999999999877666555554 22 368899999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||...
T Consensus 80 ~~id~vi~~ag~~~ 93 (252)
T PRK06138 80 GRLDVLVNNAGFGC 93 (252)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999999754
No 80
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.71 E-value=3.6e-16 Score=121.77 Aligned_cols=92 Identities=30% Similarity=0.393 Sum_probs=80.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++..... ++.++.+|++|+++++++++++.+.
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGP--EGLGVSADVRDYAAVEAAFAQIADE 83 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC--ceEEEECCCCCHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999998777666666654422 4778899999999999999999999
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
++++|+||||||..
T Consensus 84 ~~~iD~vi~~ag~~ 97 (264)
T PRK07576 84 FGPIDVLVSGAAGN 97 (264)
T ss_pred cCCCCEEEECCCCC
Confidence 99999999999864
No 81
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.70 E-value=3.3e-16 Score=121.12 Aligned_cols=92 Identities=23% Similarity=0.362 Sum_probs=82.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|++||||++|+||+++++.|+++|++|++++|+++..++..+++... + .++.++++|++|.++++++++++.+.+
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA-G-GKAIGVAMDVTNEDAVNAGIDKVAERF 82 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc-C-ceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56899999999999999999999999999999999988777777777543 3 258889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||...
T Consensus 83 ~~~d~vi~~ag~~~ 96 (262)
T PRK13394 83 GSVDILVSNAGIQI 96 (262)
T ss_pred CCCCEEEECCccCC
Confidence 99999999999864
No 82
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.70 E-value=3.3e-16 Score=120.39 Aligned_cols=90 Identities=23% Similarity=0.342 Sum_probs=76.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|+++||||++|||.+++++|+++|++|++++|+.. ++..+.+... + .++.++.+|+++.++++++++++.+.+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL-G-RRFLSLTADLSDIEAIKALVDSAVEEF 78 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc-C-CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999998652 2333334332 2 258889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||+..
T Consensus 79 ~~~d~li~~ag~~~ 92 (248)
T TIGR01832 79 GHIDILVNNAGIIR 92 (248)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999999864
No 83
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.70 E-value=3.4e-16 Score=120.21 Aligned_cols=90 Identities=27% Similarity=0.401 Sum_probs=80.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+|+++||||+|+||.+++++|+++|++|++++|+.+..++....+.. + .++.++.+|++|+++++++++++.+.+
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--G-GRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--C-CeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 6789999999999999999999999999999999998777666665543 2 368899999999999999999999999
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
+++|+||||||..
T Consensus 80 ~~~d~vi~~ag~~ 92 (251)
T PRK07231 80 GSVDILVNNAGTT 92 (251)
T ss_pred CCCCEEEECCCCC
Confidence 9999999999974
No 84
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.70 E-value=4.6e-16 Score=120.34 Aligned_cols=92 Identities=28% Similarity=0.469 Sum_probs=81.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+|+++||||++|||++++++|+++|++|++++|+.+..++...++... +. ++.++.+|++|.++++++++.+.+.+
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GG-QAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999999887777766666543 22 57888999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|++|||||+..
T Consensus 87 ~~~d~li~~ag~~~ 100 (255)
T PRK06113 87 GKVDILVNNAGGGG 100 (255)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999999754
No 85
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.70 E-value=4e-16 Score=120.28 Aligned_cols=93 Identities=26% Similarity=0.387 Sum_probs=82.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
|+++|+++|||++++||.+++++|+++|++|++++|+.+..++...++.... .++.++.+|++|+++++++++++.+.
T Consensus 1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (258)
T PRK12429 1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAG--GKAIGVAMDVTDEEAINAGIDYAVET 78 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999999887777666665432 26888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++.+|+||||||...
T Consensus 79 ~~~~d~vi~~a~~~~ 93 (258)
T PRK12429 79 FGGVDILVNNAGIQH 93 (258)
T ss_pred cCCCCEEEECCCCCC
Confidence 999999999999754
No 86
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.70 E-value=5.4e-16 Score=119.07 Aligned_cols=93 Identities=20% Similarity=0.244 Sum_probs=82.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++|||++|+||+++++.|+++|++|++++|+++..++..++++... .++.++.+|++|+++++++++++.+.
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAG--GRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999999887777766665432 25888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||...
T Consensus 82 ~~~id~vi~~ag~~~ 96 (250)
T PRK12939 82 LGGLDGLVNNAGITN 96 (250)
T ss_pred cCCCCEEEECCCCCC
Confidence 999999999999864
No 87
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.70 E-value=3.7e-16 Score=120.88 Aligned_cols=91 Identities=18% Similarity=0.257 Sum_probs=76.9
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.+|+++|||+++|||++++++|++.|++|+++++... ++..+++... + .++.++++|++|.++++++++++.++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL-G-RRFLSLTADLRKIDGIPALLERAVAE 82 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 477999999999999999999999999999998887542 3334444432 2 25888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|+||||||+..
T Consensus 83 ~~~~D~li~~Ag~~~ 97 (253)
T PRK08993 83 FGHIDILVNNAGLIR 97 (253)
T ss_pred hCCCCEEEECCCCCC
Confidence 999999999999854
No 88
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.70 E-value=3.7e-16 Score=120.17 Aligned_cols=92 Identities=20% Similarity=0.378 Sum_probs=79.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEE-EecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVII-CSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+.+|+++||||++|||++++++|+++|++|++ ..|+.+..++..++++.. + .++.++.+|++|+++++++++++.+.
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-G-RKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-C-CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999876 477777766666666543 2 26888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||...
T Consensus 80 ~~~id~vi~~ag~~~ 94 (250)
T PRK08063 80 FGRLDVFVNNAASGV 94 (250)
T ss_pred cCCCCEEEECCCCCC
Confidence 999999999999753
No 89
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.69 E-value=6.1e-16 Score=120.85 Aligned_cols=93 Identities=24% Similarity=0.292 Sum_probs=81.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|++||||++|+||.+++++|+++|++|++++|+.+..++..+++.......++.++.+|++|+++++++++++.+.+
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999999887776666665543222368888999999999999999999999
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
+++|+||||||..
T Consensus 85 ~~~d~li~~ag~~ 97 (276)
T PRK05875 85 GRLHGVVHCAGGS 97 (276)
T ss_pred CCCCEEEECCCcc
Confidence 9999999999965
No 90
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.69 E-value=5.9e-16 Score=119.91 Aligned_cols=92 Identities=25% Similarity=0.378 Sum_probs=80.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|++|||||+|+||.+++++|+++|++|++++|+.+..+...+++... + .++.++.+|++|+++++++++++.+.
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~-~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL-G-IDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999887766666665443 2 25788999999999999999999999
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
++++|++|||||..
T Consensus 87 ~~~id~vi~~ag~~ 100 (259)
T PRK08213 87 FGHVDILVNNAGAT 100 (259)
T ss_pred hCCCCEEEECCCCC
Confidence 99999999999975
No 91
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.69 E-value=1.5e-15 Score=119.98 Aligned_cols=93 Identities=28% Similarity=0.307 Sum_probs=78.5
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
..+++|++|||||++|||.+++++|+++|++|++++|+.+. .+.....+... + .++.++.+|++|.++++++++++.
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~i~ 119 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE-G-VKCLLIPGDVSDEAFCKDAVEETV 119 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-C-CeEEEEEccCCCHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999997533 33444444322 3 368889999999999999999999
Q ss_pred HhcCCccEEEEcccCC
Q 030706 155 KNLKYVDIWVFMSDLH 170 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~ 170 (173)
+.++++|+||||||..
T Consensus 120 ~~~~~iD~lI~~Ag~~ 135 (290)
T PRK06701 120 RELGRLDILVNNAAFQ 135 (290)
T ss_pred HHcCCCCEEEECCccc
Confidence 9999999999999975
No 92
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.69 E-value=4.1e-16 Score=120.40 Aligned_cols=85 Identities=32% Similarity=0.411 Sum_probs=74.7
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++||||++|||+++++.|+++|++|++++|+.+. . ..+ .++.++.+|++++++++++++++.+.
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~-~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 72 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------T-VDG-RPAEFHAADVRDPDQVAALVDAIVER 72 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------h-hcC-CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999998643 0 112 25788999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||+..
T Consensus 73 ~~~id~vi~~ag~~~ 87 (252)
T PRK07856 73 HGRLDVLVNNAGGSP 87 (252)
T ss_pred cCCCCEEEECCCCCC
Confidence 999999999999754
No 93
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.69 E-value=8.4e-16 Score=117.77 Aligned_cols=93 Identities=22% Similarity=0.349 Sum_probs=78.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
++++|+++||||++|||++++++|+++|++|+++.++.+ ..++..+++... + .++.++.+|++|.++++++++++.+
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA-G-GRAIAVQADVADAAAVTRLFDAAET 79 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999988877543 344444555432 3 3688999999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.++++|+||||||+..
T Consensus 80 ~~~~id~vi~~ag~~~ 95 (245)
T PRK12937 80 AFGRIDVLVNNAGVMP 95 (245)
T ss_pred HcCCCCEEEECCCCCC
Confidence 9999999999999754
No 94
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.69 E-value=6.8e-16 Score=118.27 Aligned_cols=91 Identities=25% Similarity=0.325 Sum_probs=79.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
++|+++||||+++||+.+++.|+++|++|++++|+.+..++..+.+... + .++.++.+|++|++++.++++++.+.++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST-G-VKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC-C-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4589999999999999999999999999999999987776666665543 2 2588899999999999999999999999
Q ss_pred CccEEEEcccCCC
Q 030706 159 YVDIWVFMSDLHS 171 (173)
Q Consensus 159 ~id~lVn~AG~~~ 171 (173)
++|+||||||...
T Consensus 83 ~id~lv~~ag~~~ 95 (241)
T PRK07454 83 CPDVLINNAGMAY 95 (241)
T ss_pred CCCEEEECCCccC
Confidence 9999999999753
No 95
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.69 E-value=5.1e-16 Score=120.13 Aligned_cols=89 Identities=27% Similarity=0.387 Sum_probs=78.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+|+++|||+++|||+++++.|+++|++|++++|+.+..++..+++ . .++.++.+|++|+++++++++++.+.+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI----G-PAAIAVSLDVTRQDSIDRIVAAAVERF 78 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh----C-CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999999887766554443 2 257888999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||...
T Consensus 79 ~~id~li~~ag~~~ 92 (257)
T PRK07067 79 GGIDILFNNAALFD 92 (257)
T ss_pred CCCCEEEECCCcCC
Confidence 99999999999753
No 96
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.69 E-value=7.7e-16 Score=119.43 Aligned_cols=91 Identities=27% Similarity=0.384 Sum_probs=77.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+|+++||||++|||++++++|+++|++|++++|+.. ..+..+++... + .++.++.+|++++++++++++++.+.+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR-G-HRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh-C-CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999999864 33444444332 2 257889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||+..
T Consensus 81 ~~id~vi~~ag~~~ 94 (263)
T PRK08226 81 GRIDILVNNAGVCR 94 (263)
T ss_pred CCCCEEEECCCcCC
Confidence 99999999999753
No 97
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.69 E-value=8.7e-16 Score=119.17 Aligned_cols=93 Identities=27% Similarity=0.418 Sum_probs=79.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+++|+++||||++|||+++++.|+++|++|+++.|+. +..+...+++... + .++.++.+|++|.++++++++++.+.
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~i~~~~~~~~~~ 82 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA-G-GEAIAVKGDVTVESDVVNLIQTAVKE 82 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-C-CeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999988854 3445555555443 2 36888999999999999999999999
Q ss_pred cCCccEEEEcccCCCC
Q 030706 157 LKYVDIWVFMSDLHSS 172 (173)
Q Consensus 157 ~g~id~lVn~AG~~~~ 172 (173)
++++|+||||||+..+
T Consensus 83 ~g~id~lv~~ag~~~~ 98 (261)
T PRK08936 83 FGTLDVMINNAGIENA 98 (261)
T ss_pred cCCCCEEEECCCCCCC
Confidence 9999999999998643
No 98
>PRK06398 aldose dehydrogenase; Validated
Probab=99.69 E-value=3.3e-16 Score=121.64 Aligned_cols=81 Identities=26% Similarity=0.320 Sum_probs=73.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|++|||||++|||++++++|+++|++|++++|+.... .++.++.+|++|+++++++++++.+.+
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-------------~~~~~~~~D~~~~~~i~~~~~~~~~~~ 70 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-------------NDVDYFKVDVSNKEQVIKGIDYVISKY 70 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-------------CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 6789999999999999999999999999999999976431 147788999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||+..
T Consensus 71 ~~id~li~~Ag~~~ 84 (258)
T PRK06398 71 GRIDILVNNAGIES 84 (258)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999999853
No 99
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.68 E-value=5.7e-16 Score=121.25 Aligned_cols=92 Identities=20% Similarity=0.273 Sum_probs=79.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
.+|+++||||+|+||.++++.|+++|++|++++|+.+..++..+++.....+.++.++.+|++|++++++ ++++.+.++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 5789999999999999999999999999999999987776665555443322368899999999999999 999999999
Q ss_pred CccEEEEcccCCC
Q 030706 159 YVDIWVFMSDLHS 171 (173)
Q Consensus 159 ~id~lVn~AG~~~ 171 (173)
++|++|||||...
T Consensus 81 ~id~vv~~ag~~~ 93 (280)
T PRK06914 81 RIDLLVNNAGYAN 93 (280)
T ss_pred CeeEEEECCcccc
Confidence 9999999999765
No 100
>PRK06484 short chain dehydrogenase; Validated
Probab=99.68 E-value=9.6e-16 Score=129.79 Aligned_cols=89 Identities=29% Similarity=0.442 Sum_probs=78.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
...+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +. ++..+.+|++|+++++++++++.+.
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~ 340 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----GD-EHLSVQADITDEAAVESAFAQIQAR 340 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceeEEEccCCCHHHHHHHHHHHHHH
Confidence 457999999999999999999999999999999999887766555433 22 5777899999999999999999999
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
+|++|+||||||+.
T Consensus 341 ~g~id~li~nAg~~ 354 (520)
T PRK06484 341 WGRLDVLVNNAGIA 354 (520)
T ss_pred cCCCCEEEECCCCc
Confidence 99999999999986
No 101
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.68 E-value=6.3e-16 Score=119.86 Aligned_cols=92 Identities=21% Similarity=0.268 Sum_probs=79.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhh-HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
-.+|+++||||++|||++++++|+++| ++|++++|+.+. .++..+++..... .++.++.+|++|+++++++++++.+
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGA-SSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCC-CceEEEEecCCChHHHHHHHHHHHh
Confidence 357899999999999999999999995 899999998875 7777777765433 2688999999999999999999886
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
+|++|++|||+|+..
T Consensus 85 -~g~id~li~~ag~~~ 99 (253)
T PRK07904 85 -GGDVDVAIVAFGLLG 99 (253)
T ss_pred -cCCCCEEEEeeecCC
Confidence 589999999999864
No 102
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.68 E-value=1.1e-15 Score=117.04 Aligned_cols=92 Identities=29% Similarity=0.389 Sum_probs=81.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+++++|||++++||.+++++|+++|++|++++|+.+..++...++... + .++.++.+|++++++++++++++.+.+
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY-G-VKVVIATADVSDYEEVTAAIEQLKNEL 82 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-C-CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999999987777766666433 3 368889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||...
T Consensus 83 ~~id~vi~~ag~~~ 96 (239)
T PRK07666 83 GSIDILINNAGISK 96 (239)
T ss_pred CCccEEEEcCcccc
Confidence 99999999999754
No 103
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.68 E-value=8.3e-16 Score=118.04 Aligned_cols=92 Identities=14% Similarity=0.210 Sum_probs=76.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+++|+++|||+++|||++++++|+++|++|++.. ++....++..+++... + .++.++.+|++|.++++++++++.+.
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL-G-FDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4579999999999999999999999999988854 4444444445555433 2 25778899999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||+..
T Consensus 79 ~~~id~li~~ag~~~ 93 (246)
T PRK12938 79 VGEIDVLVNNAGITR 93 (246)
T ss_pred hCCCCEEEECCCCCC
Confidence 999999999999864
No 104
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.68 E-value=1.5e-15 Score=117.37 Aligned_cols=92 Identities=27% Similarity=0.376 Sum_probs=81.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+|+++||||+||||+++++.|+++|++|++++|+.+..++...++..... ++.++.+|++++++++++++++.+.+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGG--AAHVVSLDVTDYQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 6789999999999999999999999999999999998877777666644322 57889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|++|||||+..
T Consensus 85 ~~~d~li~~ag~~~ 98 (258)
T PRK06949 85 GTIDILVNNSGVST 98 (258)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999999753
No 105
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.68 E-value=1.4e-15 Score=117.82 Aligned_cols=92 Identities=24% Similarity=0.356 Sum_probs=76.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
..+|+++||||++|||++++++|+++|++|+++.+. .+..+....++... + .++.++.+|++|.++++++++++.+.
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL-G-RRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-C-CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999887764 44455555555433 2 25888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|+||||||+..
T Consensus 85 ~~~iD~vi~~ag~~~ 99 (258)
T PRK09134 85 LGPITLLVNNASLFE 99 (258)
T ss_pred cCCCCEEEECCcCCC
Confidence 999999999999754
No 106
>PRK12743 oxidoreductase; Provisional
Probab=99.67 E-value=1.1e-15 Score=118.38 Aligned_cols=90 Identities=21% Similarity=0.196 Sum_probs=77.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
+|+++||||++|||++++++|+++|++|+++++ +.+..+...+++... + .++.++.+|++|.++++++++++.+.++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-G-VRAEIRQLDLSDLPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-C-CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 589999999999999999999999999998865 445555555555543 2 2688899999999999999999999999
Q ss_pred CccEEEEcccCCC
Q 030706 159 YVDIWVFMSDLHS 171 (173)
Q Consensus 159 ~id~lVn~AG~~~ 171 (173)
++|+||||||...
T Consensus 80 ~id~li~~ag~~~ 92 (256)
T PRK12743 80 RIDVLVNNAGAMT 92 (256)
T ss_pred CCCEEEECCCCCC
Confidence 9999999999754
No 107
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.67 E-value=1.2e-15 Score=118.53 Aligned_cols=90 Identities=22% Similarity=0.371 Sum_probs=78.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++++++||||++|||++++++|+++|++|++++|+.+..++...++ . .+ .++.++.+|++|.++++++++.+.+ +
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~~-~~~~~~~~D~~d~~~~~~~~~~~~~-~ 78 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-YP-GRHRWVVADLTSEAGREAVLARARE-M 78 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-cC-CceEEEEccCCCHHHHHHHHHHHHh-c
Confidence 57899999999999999999999999999999999988777766665 2 23 3688899999999999999999876 8
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||+..
T Consensus 79 ~~id~lv~~ag~~~ 92 (263)
T PRK09072 79 GGINVLINNAGVNH 92 (263)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999999754
No 108
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.67 E-value=1.1e-15 Score=133.29 Aligned_cols=95 Identities=22% Similarity=0.310 Sum_probs=83.7
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.+|++|||||++|||++++++|+++|++|++++|+.+..+...+++....+..++..+.+|++|+++++++++++.+.
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA 490 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 36789999999999999999999999999999999998877776666654434335788999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|+||||||+..
T Consensus 491 ~g~iDilV~nAG~~~ 505 (676)
T TIGR02632 491 YGGVDIVVNNAGIAT 505 (676)
T ss_pred cCCCcEEEECCCCCC
Confidence 999999999999864
No 109
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.67 E-value=1.4e-15 Score=116.85 Aligned_cols=92 Identities=20% Similarity=0.325 Sum_probs=81.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++++++|||+++|||.++++.|+++|++|++++|+.+..++..+++... + .++.++.+|+++.++++++++++.+.+
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL-G-TEVRGYAANVTDEEDVEATFAQIAEDF 80 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999999987777766666543 2 258889999999999999999999888
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||+..
T Consensus 81 ~~id~vi~~ag~~~ 94 (253)
T PRK08217 81 GQLNGLINNAGILR 94 (253)
T ss_pred CCCCEEEECCCccC
Confidence 99999999999753
No 110
>PRK07985 oxidoreductase; Provisional
Probab=99.67 E-value=9.8e-16 Score=121.33 Aligned_cols=92 Identities=26% Similarity=0.308 Sum_probs=76.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh--hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA--ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
.+++|++|||||++|||++++++|+++|++|++++++. +..++..+.+... +. ++.++.+|++|+++++++++++.
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~ 123 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC-GR-KAVLLPGDLSDEKFARSLVHEAH 123 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc-CC-eEEEEEccCCCHHHHHHHHHHHH
Confidence 47889999999999999999999999999999988753 2334443333322 32 57889999999999999999999
Q ss_pred HhcCCccEEEEcccCC
Q 030706 155 KNLKYVDIWVFMSDLH 170 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~ 170 (173)
+.+|++|++|||||+.
T Consensus 124 ~~~g~id~lv~~Ag~~ 139 (294)
T PRK07985 124 KALGGLDIMALVAGKQ 139 (294)
T ss_pred HHhCCCCEEEECCCCC
Confidence 9999999999999974
No 111
>PRK05855 short chain dehydrogenase; Validated
Probab=99.67 E-value=9.5e-16 Score=130.64 Aligned_cols=93 Identities=18% Similarity=0.264 Sum_probs=83.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.++++|||||++|||++++++|+++|++|++++|+.+..++..+++...+. ++.++.+|++|.++++++++++.+.
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGA--VAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 46678999999999999999999999999999999998887777777654432 5889999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|+||||||+..
T Consensus 390 ~g~id~lv~~Ag~~~ 404 (582)
T PRK05855 390 HGVPDIVVNNAGIGM 404 (582)
T ss_pred cCCCcEEEECCccCC
Confidence 999999999999864
No 112
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.67 E-value=1e-15 Score=118.41 Aligned_cols=88 Identities=34% Similarity=0.498 Sum_probs=74.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
++.+|+++||||++|||+++++.|+++|++|++++++.+.. .+++... ++.++.+|++|+++++++++++.+.
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK----GVFTIKCDVGNRDQVKKSKEVVEKE 76 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC----CCeEEEecCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999887654322 2223221 3678899999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|+||||||+..
T Consensus 77 ~~~id~li~~ag~~~ 91 (255)
T PRK06463 77 FGRVDVLVNNAGIMY 91 (255)
T ss_pred cCCCCEEEECCCcCC
Confidence 999999999999853
No 113
>PRK06182 short chain dehydrogenase; Validated
Probab=99.67 E-value=7.6e-16 Score=120.31 Aligned_cols=85 Identities=21% Similarity=0.246 Sum_probs=74.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
++|+++|||++||||+++++.|+++|++|++++|+.+.+++.. . . .+.++.+|++|.++++++++++.+.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~--~--~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 73 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S--L--GVHPLSLDVTDEASIKAAVDTIIAEEG 73 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h--C--CCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999999999876654322 1 1 367889999999999999999999999
Q ss_pred CccEEEEcccCCC
Q 030706 159 YVDIWVFMSDLHS 171 (173)
Q Consensus 159 ~id~lVn~AG~~~ 171 (173)
++|+||||||+..
T Consensus 74 ~id~li~~ag~~~ 86 (273)
T PRK06182 74 RIDVLVNNAGYGS 86 (273)
T ss_pred CCCEEEECCCcCC
Confidence 9999999999864
No 114
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.67 E-value=5.5e-16 Score=120.75 Aligned_cols=84 Identities=25% Similarity=0.238 Sum_probs=73.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
.++++++||||+||||++++++|+++|++|++++|+.+..+. ..++.++++|++|+++++++++++.+.+
T Consensus 2 ~~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 71 (270)
T PRK06179 2 SNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARA 71 (270)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhC
Confidence 467899999999999999999999999999999998654321 1247788999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
|++|+||||||+..
T Consensus 72 g~~d~li~~ag~~~ 85 (270)
T PRK06179 72 GRIDVLVNNAGVGL 85 (270)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999999854
No 115
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.67 E-value=1.5e-15 Score=116.61 Aligned_cols=89 Identities=26% Similarity=0.368 Sum_probs=77.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|+++||||+++||.+++++|+++|++|++++|+.+..++..+++ +. ++.++++|++|.+++..+++++.+.+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----GE-SALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh----CC-ceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999999999999876555444333 32 57889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||...
T Consensus 79 ~~id~vi~~ag~~~ 92 (249)
T PRK06500 79 GRLDAVFINAGVAK 92 (249)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999999754
No 116
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.67 E-value=1.3e-15 Score=117.44 Aligned_cols=93 Identities=23% Similarity=0.314 Sum_probs=75.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
|+++|+++||||++|||+++++.|++.|++|++++ ++.+..++...++..... ++..+.+|+++.++++.+++++.+
T Consensus 1 ~~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~ 78 (252)
T PRK12747 1 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGG--SAFSIGANLESLHGVEALYSSLDN 78 (252)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCC--ceEEEecccCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999998875 555666666666654322 477889999999999999988775
Q ss_pred h----cC--CccEEEEcccCCC
Q 030706 156 N----LK--YVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~----~g--~id~lVn~AG~~~ 171 (173)
. +| ++|+||||||+..
T Consensus 79 ~~~~~~g~~~id~lv~~Ag~~~ 100 (252)
T PRK12747 79 ELQNRTGSTKFDILINNAGIGP 100 (252)
T ss_pred HhhhhcCCCCCCEEEECCCcCC
Confidence 3 34 8999999999753
No 117
>PRK09135 pteridine reductase; Provisional
Probab=99.67 E-value=2.1e-15 Score=115.60 Aligned_cols=93 Identities=22% Similarity=0.212 Sum_probs=77.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+.++++|||||+|+||++++++|+++|++|++++|+. +..+.....+....+. .+.++.+|++|.++++++++++.+.
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPG-SAAALQADLLDPDALPELVAACVAA 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCC-ceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999864 3344444444433232 5788899999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||...
T Consensus 83 ~~~~d~vi~~ag~~~ 97 (249)
T PRK09135 83 FGRLDALVNNASSFY 97 (249)
T ss_pred cCCCCEEEECCCCCC
Confidence 999999999999754
No 118
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.67 E-value=9.1e-16 Score=123.01 Aligned_cols=92 Identities=17% Similarity=0.316 Sum_probs=74.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
..|++++||||++|||++++++|+++|++|++++|+++.+++..+++...++..++..+.+|+++ ++.+.++++.+.+
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~ 128 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI 128 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence 34899999999999999999999999999999999999988888888766544468888999985 2334444444444
Q ss_pred C--CccEEEEcccCCC
Q 030706 158 K--YVDIWVFMSDLHS 171 (173)
Q Consensus 158 g--~id~lVn~AG~~~ 171 (173)
+ .+|+||||||+..
T Consensus 129 ~~~didilVnnAG~~~ 144 (320)
T PLN02780 129 EGLDVGVLINNVGVSY 144 (320)
T ss_pred cCCCccEEEEecCcCC
Confidence 4 4669999999864
No 119
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.67 E-value=5.7e-16 Score=123.24 Aligned_cols=94 Identities=19% Similarity=0.206 Sum_probs=74.4
Q ss_pred CCCCCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHH--------hCC---ceEEEEEeeC--
Q 030706 76 PMLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE--------FGE---QHVWGTKCDV-- 140 (173)
Q Consensus 76 ~~~~~k~~lItGa--~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------~~~---~~~~~~~~Dv-- 140 (173)
+.++||++||||+ ++|||+++|+.|++.|++|++ +|+.+.++.....+... ... .....+.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 3488999999999 799999999999999999998 77777776666555421 001 0145678898
Q ss_pred CC------------------HHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706 141 SE------------------GNEVADLVAFAQKNLKYVDIWVFMSDLH 170 (173)
Q Consensus 141 ~~------------------~~~v~~~~~~~~~~~g~id~lVn~AG~~ 170 (173)
++ +++++++++++.+.+|++|+||||||+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~ 131 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANG 131 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCcc
Confidence 43 4489999999999999999999999864
No 120
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.67 E-value=1.4e-15 Score=118.70 Aligned_cols=89 Identities=24% Similarity=0.384 Sum_probs=79.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
|+++||||+||||++++++|+++|++|++++|+.+..++...++..... ++.++.+|++|+++++++++++.+.++++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGG--DGFYQRCDVRDYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--ceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999999999999998887777777765422 58889999999999999999999999999
Q ss_pred cEEEEcccCCC
Q 030706 161 DIWVFMSDLHS 171 (173)
Q Consensus 161 d~lVn~AG~~~ 171 (173)
|+||||||+..
T Consensus 79 d~lI~~ag~~~ 89 (270)
T PRK05650 79 DVIVNNAGVAS 89 (270)
T ss_pred CEEEECCCCCC
Confidence 99999999864
No 121
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.66 E-value=1.5e-15 Score=118.65 Aligned_cols=89 Identities=21% Similarity=0.275 Sum_probs=77.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
|+++||||++|||+++++.|+++|++|++++|+.+..++..+++...... .+.++.+|++|+++++++++++.+.++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGT-VPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC-cceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 47999999999999999999999999999999987777777776654332 35667899999999999999999999999
Q ss_pred cEEEEcccCC
Q 030706 161 DIWVFMSDLH 170 (173)
Q Consensus 161 d~lVn~AG~~ 170 (173)
|+||||||+.
T Consensus 80 d~lv~~ag~~ 89 (272)
T PRK07832 80 DVVMNIAGIS 89 (272)
T ss_pred CEEEECCCCC
Confidence 9999999975
No 122
>PRK06484 short chain dehydrogenase; Validated
Probab=99.66 E-value=1.1e-15 Score=129.49 Aligned_cols=88 Identities=27% Similarity=0.439 Sum_probs=78.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
..+|+++|||+++|||+++++.|+++|++|++++|+.+.+++...++ +. ++.++.+|++|+++++++++++.+.+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----GP-DHHALAMDVSDEAQIREGFEQLHREF 77 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CC-ceeEEEeccCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999999887766555443 22 57789999999999999999999999
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
|++|+||||||+.
T Consensus 78 g~iD~li~nag~~ 90 (520)
T PRK06484 78 GRIDVLVNNAGVT 90 (520)
T ss_pred CCCCEEEECCCcC
Confidence 9999999999984
No 123
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.66 E-value=1.4e-15 Score=119.26 Aligned_cols=87 Identities=31% Similarity=0.415 Sum_probs=74.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
+|+++|||+ +|||++++++|+ +|++|++++|+.+..++..+++... + .++.++.+|++|+++++++++++ +++++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~ 76 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA-G-FDVSTQEVDVSSRESVKALAATA-QTLGP 76 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence 589999998 699999999996 8999999999887777666666543 2 26888999999999999999988 56899
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|+||||||+..
T Consensus 77 id~li~nAG~~~ 88 (275)
T PRK06940 77 VTGLVHTAGVSP 88 (275)
T ss_pred CCEEEECCCcCC
Confidence 999999999863
No 124
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.66 E-value=1.5e-15 Score=119.01 Aligned_cols=89 Identities=25% Similarity=0.232 Sum_probs=76.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+|+++||||+||||++++++|+++|++|++++|+.+..+.... ..+ .++.++.+|++|++++.++++++.+.+
T Consensus 2 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~----~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~ 76 (277)
T PRK06180 2 SSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA----LHP-DRALARLLDVTDFDAIDAVVADAEATF 76 (277)
T ss_pred CCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh----hcC-CCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999999998766543322 222 257888999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||+..
T Consensus 77 ~~~d~vv~~ag~~~ 90 (277)
T PRK06180 77 GPIDVLVNNAGYGH 90 (277)
T ss_pred CCCCEEEECCCccC
Confidence 99999999999854
No 125
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.66 E-value=2.1e-15 Score=115.88 Aligned_cols=92 Identities=25% Similarity=0.407 Sum_probs=80.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|++|||||+++||.+++++|+++|++|++++|+.+..++...++... + .++.++.+|++|.++++++++++.+.+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK-G-GNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999987776666666543 2 258889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|++|||||...
T Consensus 79 ~~~d~vi~~ag~~~ 92 (250)
T TIGR03206 79 GPVDVLVNNAGWDK 92 (250)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999999753
No 126
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.66 E-value=1e-15 Score=117.08 Aligned_cols=84 Identities=23% Similarity=0.285 Sum_probs=72.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
+|++|||||++|||++++++|+++|++|++++|+.+... +.+... .+.++.+|++|+++++++++++.+.+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 74 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDG 74 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence 579999999999999999999999999999999865432 223221 2567899999999999999999999999
Q ss_pred ccEEEEcccCC
Q 030706 160 VDIWVFMSDLH 170 (173)
Q Consensus 160 id~lVn~AG~~ 170 (173)
+|++|||||+.
T Consensus 75 id~lv~~ag~~ 85 (236)
T PRK06483 75 LRAIIHNASDW 85 (236)
T ss_pred ccEEEECCccc
Confidence 99999999975
No 127
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.66 E-value=2e-15 Score=116.86 Aligned_cols=93 Identities=18% Similarity=0.248 Sum_probs=75.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh----hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA----ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF 152 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 152 (173)
.+++|+++|||+++|||+++++.|+++|++|++++++. +..++..+++... + .++.++++|++|++++++++++
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~~~~~~~ 82 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA-G-AKAVAFQADLTTAAAVEKLFDD 82 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh-C-CcEEEEecCcCCHHHHHHHHHH
Confidence 36789999999999999999999999999977766432 2333444444332 2 2588899999999999999999
Q ss_pred HHHhcCCccEEEEcccCCC
Q 030706 153 AQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 153 ~~~~~g~id~lVn~AG~~~ 171 (173)
+.+.++++|+||||||+..
T Consensus 83 ~~~~~~~id~li~~ag~~~ 101 (257)
T PRK12744 83 AKAAFGRPDIAINTVGKVL 101 (257)
T ss_pred HHHhhCCCCEEEECCcccC
Confidence 9999999999999999753
No 128
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.66 E-value=2.2e-15 Score=115.61 Aligned_cols=93 Identities=22% Similarity=0.321 Sum_probs=81.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
++.+|+++||||+|+||.+++++|+++|++|++++|+.+...+....+..... ++.++.+|++|.++++++++++.+.
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGG--KARARQVDVRDRAALKAAVAAGVED 80 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--eEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36689999999999999999999999999999999998776666666654322 5888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++.+|+||||+|...
T Consensus 81 ~~~~d~vi~~ag~~~ 95 (251)
T PRK12826 81 FGRLDILVANAGIFP 95 (251)
T ss_pred hCCCCEEEECCCCCC
Confidence 999999999998765
No 129
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.66 E-value=2.5e-15 Score=116.42 Aligned_cols=89 Identities=30% Similarity=0.357 Sum_probs=77.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|+++|||+++|||+++++.|+++|++|++++|+.+..++..+++....+. ++.++.+|++|++++++++++ +
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~----~ 79 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGV-DVAVHALDLSSPEAREQLAAE----A 79 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEecCCCHHHHHHHHHH----h
Confidence 67899999999999999999999999999999999988777777777654443 688899999999999888754 5
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||+..
T Consensus 80 g~id~lv~~ag~~~ 93 (259)
T PRK06125 80 GDIDILVNNAGAIP 93 (259)
T ss_pred CCCCEEEECCCCCC
Confidence 89999999999864
No 130
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.65 E-value=1.5e-15 Score=118.35 Aligned_cols=90 Identities=17% Similarity=0.228 Sum_probs=72.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHH----HHHHHHHHH
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEV----ADLVAFAQK 155 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v----~~~~~~~~~ 155 (173)
++++||||++|||+++++.|+++|++|+++++ +.+..++..+++....+. ++.++.+|++|++++ +++++++.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~~~ 80 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPN-SAVTCQADLSNSATLFSRCEAIIDACFR 80 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCC-ceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence 58999999999999999999999999999875 455666666666443333 577789999999865 556666677
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.+|++|+||||||+..
T Consensus 81 ~~g~iD~lv~nAG~~~ 96 (267)
T TIGR02685 81 AFGRCDVLVNNASAFY 96 (267)
T ss_pred ccCCceEEEECCccCC
Confidence 8899999999999754
No 131
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.65 E-value=3.4e-15 Score=114.78 Aligned_cols=91 Identities=27% Similarity=0.406 Sum_probs=77.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+++|+++||||+||||+++++.|+++|++|++++|+.+ ..+....++... + .++.++.+|++|+++++++++++.+.
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA-G-GRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc-C-CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 67899999999999999999999999999999998753 344444455433 2 25788999999999999999999999
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
++.+|+||||||..
T Consensus 82 ~~~~d~vi~~ag~~ 95 (248)
T PRK07806 82 FGGLDALVLNASGG 95 (248)
T ss_pred CCCCcEEEECCCCC
Confidence 99999999999864
No 132
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.65 E-value=3.2e-15 Score=114.86 Aligned_cols=92 Identities=30% Similarity=0.433 Sum_probs=77.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+++|+++||||++|||.+++++|+++|++|+++.+ +++..++..+++... + .++.++.+|++|+++++++++++.+.
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE-G-HDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999987654 445555555555432 2 26889999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||...
T Consensus 82 ~~~id~vi~~ag~~~ 96 (247)
T PRK12935 82 FGKVDILVNNAGITR 96 (247)
T ss_pred cCCCCEEEECCCCCC
Confidence 999999999999854
No 133
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.65 E-value=1.7e-15 Score=118.80 Aligned_cols=85 Identities=25% Similarity=0.236 Sum_probs=73.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc-
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL- 157 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 157 (173)
.+|+++||||+||||+++++.|+++|++|++++|+.+.+++. ... .+.++.+|++|.++++++++++.+.+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l----~~~----~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 74 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL----EAE----GLEAFQLDYAEPESIAALVAQVLELSG 74 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHC----CceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999987665433 221 36778999999999999999987766
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
|++|+||||||+..
T Consensus 75 g~id~li~~Ag~~~ 88 (277)
T PRK05993 75 GRLDALFNNGAYGQ 88 (277)
T ss_pred CCccEEEECCCcCC
Confidence 68999999999764
No 134
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.65 E-value=2.5e-15 Score=115.66 Aligned_cols=94 Identities=19% Similarity=0.277 Sum_probs=80.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC--CHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS--EGNEVADLVAFAQ 154 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~--~~~~v~~~~~~~~ 154 (173)
.+++|+++|||++++||.+++++|++.|++|++++|+.+..++..+++...... ++.++.+|++ ++++++++++.+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGP-QPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCC-CceEEEecccCCCHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999988777777776654332 5667777875 8899999999999
Q ss_pred HhcCCccEEEEcccCCC
Q 030706 155 KNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~~ 171 (173)
+.++++|+||||||...
T Consensus 88 ~~~~~id~vi~~Ag~~~ 104 (247)
T PRK08945 88 EQFGRLDGVLHNAGLLG 104 (247)
T ss_pred HHhCCCCEEEECCcccC
Confidence 99999999999999753
No 135
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.65 E-value=3.3e-15 Score=115.31 Aligned_cols=91 Identities=29% Similarity=0.363 Sum_probs=76.8
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
+++.+|+++||||++|||.++++.|+++|++|++++|+.+. .+...++. + .++.++.+|++++++++++++++.+
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~---~-~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL---G-GNAKGLVCDVSDSQSVEAAVAAVIS 85 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh---C-CceEEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999998653 22222221 2 2567889999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.++++|+||||||+..
T Consensus 86 ~~~~~d~vi~~ag~~~ 101 (255)
T PRK06841 86 AFGRIDILVNSAGVAL 101 (255)
T ss_pred HhCCCCEEEECCCCCC
Confidence 9999999999999854
No 136
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.65 E-value=2.4e-15 Score=116.51 Aligned_cols=87 Identities=20% Similarity=0.200 Sum_probs=75.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh-cCC
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN-LKY 159 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~ 159 (173)
|+++||||++|||++++++|+++|++|++++|+.+..++....+. +.++.++++|++|.++++++++++.+. +++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~ 77 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGGR 77 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 789999999999999999999999999999998877666544432 236889999999999999999998776 789
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|+||||||+..
T Consensus 78 id~vi~~ag~~~ 89 (260)
T PRK08267 78 LDVLFNNAGILR 89 (260)
T ss_pred CCEEEECCCCCC
Confidence 999999999864
No 137
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.65 E-value=1.9e-15 Score=116.86 Aligned_cols=87 Identities=25% Similarity=0.308 Sum_probs=75.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|+++||||++|||.+++++|+++|++|++++|+....++..+++ . ..++++|++|+++++++++++.+.+
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~---~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----G---GLFVPTDVTDEDAVNALFDTAAETY 77 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----C---CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999999999876655444332 1 2467899999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||...
T Consensus 78 ~~id~vi~~ag~~~ 91 (255)
T PRK06057 78 GSVDIAFNNAGISP 91 (255)
T ss_pred CCCCEEEECCCcCC
Confidence 99999999999753
No 138
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.65 E-value=2.6e-15 Score=116.35 Aligned_cols=92 Identities=22% Similarity=0.336 Sum_probs=74.8
Q ss_pred CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecC-----------hhhHHHHHHHHHHHhCCceEEEEEeeCCCHH
Q 030706 78 LPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRS-----------AERVDSAVQSLREEFGEQHVWGTKCDVSEGN 144 (173)
Q Consensus 78 ~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~ 144 (173)
+++|+++||||+ +|||+++|++|+++|++|+++++. .+...+..+++... + .++.++.+|++|.+
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-~~~~~~~~D~~~~~ 81 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN-G-VKVSSMELDLTQND 81 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc-C-CeEEEEEcCCCCHH
Confidence 789999999998 499999999999999999987642 12222333334332 3 36889999999999
Q ss_pred HHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706 145 EVADLVAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 145 ~v~~~~~~~~~~~g~id~lVn~AG~~~ 171 (173)
+++++++++.+.+|++|+||||||+..
T Consensus 82 ~i~~~~~~~~~~~g~id~li~~ag~~~ 108 (256)
T PRK12859 82 APKELLNKVTEQLGYPHILVNNAAYST 108 (256)
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCCC
Confidence 999999999999999999999999754
No 139
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.65 E-value=2.9e-15 Score=115.43 Aligned_cols=89 Identities=22% Similarity=0.332 Sum_probs=78.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
|+++|||++++||.+++++|++.|++|++++|+.+..++..+++... + .++.++.+|++|+++++++++++.+.++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA-G-GKAVAYKLDVSDKDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999999877766666666543 2 268889999999999999999999999999
Q ss_pred cEEEEcccCCC
Q 030706 161 DIWVFMSDLHS 171 (173)
Q Consensus 161 d~lVn~AG~~~ 171 (173)
|+||||||+..
T Consensus 79 d~vi~~ag~~~ 89 (254)
T TIGR02415 79 DVMVNNAGVAP 89 (254)
T ss_pred CEEEECCCcCC
Confidence 99999999854
No 140
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.65 E-value=3e-15 Score=113.98 Aligned_cols=91 Identities=19% Similarity=0.201 Sum_probs=78.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++|||++|+||++++++|+++|++|++++|+.+...+...++... .+.++.+|++|.++++++++++.+.
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD----ALRIGGIDLVDPQAARRAVDEVNRQ 79 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc----CceEEEeecCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999887666655555432 3566789999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+|||++|...
T Consensus 80 ~~~~d~vi~~ag~~~ 94 (239)
T PRK12828 80 FGRLDALVNIAGAFV 94 (239)
T ss_pred hCCcCEEEECCcccC
Confidence 999999999999753
No 141
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.65 E-value=1e-15 Score=110.63 Aligned_cols=90 Identities=23% Similarity=0.285 Sum_probs=81.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+.+|-+.+||||.+|+|++.++.|+++|+.|++.|....+..+..+++ ++ ++.|...|+++++++...+...+.+
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel----g~-~~vf~padvtsekdv~aala~ak~k 80 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL----GG-KVVFTPADVTSEKDVRAALAKAKAK 80 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh----CC-ceEEeccccCcHHHHHHHHHHHHhh
Confidence 356789999999999999999999999999999999877777766665 33 6999999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
||++|.+|||||+..
T Consensus 81 fgrld~~vncagia~ 95 (260)
T KOG1199|consen 81 FGRLDALVNCAGIAY 95 (260)
T ss_pred ccceeeeeeccceee
Confidence 999999999999864
No 142
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.65 E-value=4e-15 Score=113.87 Aligned_cols=89 Identities=28% Similarity=0.359 Sum_probs=77.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|+++||||+|+||++++++|+++|+.|++.+++.+..++....+ +. ++.++.+|++|.++++++++++.+.+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----GE-RVKIFPANLSDRDEVKALGQKAEADL 78 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CC-ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999988876665544332 22 57788999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||...
T Consensus 79 ~~id~vi~~ag~~~ 92 (245)
T PRK12936 79 EGVDILVNNAGITK 92 (245)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999999864
No 143
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.65 E-value=2.5e-15 Score=130.44 Aligned_cols=92 Identities=28% Similarity=0.329 Sum_probs=82.9
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.... .++.++.+|++|.++++++++++.+.
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~ 445 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKG--GTAHAYTCDLTDSAAVDHTVKDILAE 445 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4778999999999999999999999999999999999888777777765432 25888999999999999999999999
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
+|++|+||||||+.
T Consensus 446 ~g~id~li~~Ag~~ 459 (657)
T PRK07201 446 HGHVDYLVNNAGRS 459 (657)
T ss_pred cCCCCEEEECCCCC
Confidence 99999999999975
No 144
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.65 E-value=3e-15 Score=115.83 Aligned_cols=92 Identities=16% Similarity=0.209 Sum_probs=75.1
Q ss_pred CCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEecCh-----------hhHHHHHHHHHHHhCCceEEEEEeeCCCHH
Q 030706 78 LPPYNVLITGSTK--GIGYALAKEFLKAGDNVIICSRSA-----------ERVDSAVQSLREEFGEQHVWGTKCDVSEGN 144 (173)
Q Consensus 78 ~~~k~~lItGa~~--gIG~aia~~l~~~G~~V~~~~r~~-----------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~ 144 (173)
+++|++|||||++ |||.+++++|+++|++|++++|++ ........++.. .+ .++.++.+|+++++
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~ 80 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES-YG-VRCEHMEIDLSQPY 80 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh-cC-CeEEEEECCCCCHH
Confidence 5789999999994 999999999999999999999872 111122333332 23 26889999999999
Q ss_pred HHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706 145 EVADLVAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 145 ~v~~~~~~~~~~~g~id~lVn~AG~~~ 171 (173)
+++++++++.+.++++|+||||||+..
T Consensus 81 ~~~~~~~~~~~~~g~id~vi~~ag~~~ 107 (256)
T PRK12748 81 APNRVFYAVSERLGDPSILINNAAYST 107 (256)
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCcCC
Confidence 999999999999999999999999853
No 145
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.65 E-value=4.7e-15 Score=116.07 Aligned_cols=92 Identities=26% Similarity=0.340 Sum_probs=79.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+|+++||||+++||++++++|+++|++|++++|+.+..++...++... +. ++.++.+|++|+++++++++++.+.+
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD-GG-EAVAFPLDVTDPDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 55689999999999999999999999999999999877666655555433 22 58888999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||||+..
T Consensus 86 ~~id~vi~~Ag~~~ 99 (274)
T PRK07775 86 GEIEVLVSGAGDTY 99 (274)
T ss_pred CCCCEEEECCCcCC
Confidence 99999999999864
No 146
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.65 E-value=3.7e-15 Score=114.48 Aligned_cols=90 Identities=23% Similarity=0.329 Sum_probs=75.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
+|++|||||+++||.+++++|+++|++|+++++ +++..++....+... + .++.++.+|++|.++++++++++.+.++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ-G-GEALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC-C-CcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 578999999999999999999999999988874 444444444445432 2 2578899999999999999999999999
Q ss_pred CccEEEEcccCCC
Q 030706 159 YVDIWVFMSDLHS 171 (173)
Q Consensus 159 ~id~lVn~AG~~~ 171 (173)
++|+||||||...
T Consensus 80 ~id~li~~ag~~~ 92 (248)
T PRK06123 80 RLDALVNNAGILE 92 (248)
T ss_pred CCCEEEECCCCCC
Confidence 9999999999864
No 147
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.5e-15 Score=116.37 Aligned_cols=83 Identities=29% Similarity=0.306 Sum_probs=73.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|++|||||++|||+++++.|+++|++|++++|+.+.. .. .++.++.+|++|+++++++++++.+.
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------LP-EGVEFVAADLTTAEGCAAVARAVLER 74 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------cC-CceeEEecCCCCHHHHHHHHHHHHHH
Confidence 37789999999999999999999999999999999975421 11 25788999999999999999999999
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
++++|+||||||+.
T Consensus 75 ~~~id~vi~~ag~~ 88 (260)
T PRK06523 75 LGGVDILVHVLGGS 88 (260)
T ss_pred cCCCCEEEECCccc
Confidence 99999999999964
No 148
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.64 E-value=3e-15 Score=116.01 Aligned_cols=89 Identities=17% Similarity=0.248 Sum_probs=77.0
Q ss_pred EEEEEcCCchHHHHHHHHHHH----cCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 82 NVLITGSTKGIGYALAKEFLK----AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++||||++|||++++++|++ .|++|++++|+.+.+++..+++....+..++.++.+|++|.++++++++++.+.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 7999999999988888887777653333368889999999999999999998887
Q ss_pred CCc----cEEEEcccCC
Q 030706 158 KYV----DIWVFMSDLH 170 (173)
Q Consensus 158 g~i----d~lVn~AG~~ 170 (173)
|.+ |+||||||+.
T Consensus 82 g~~~~~~~~lv~nAG~~ 98 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTL 98 (256)
T ss_pred ccCCCceEEEEeCCccc
Confidence 653 6999999975
No 149
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.64 E-value=4.8e-15 Score=114.35 Aligned_cols=90 Identities=26% Similarity=0.305 Sum_probs=75.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
.|+++|||+++|||.+++++|+++|++|++++|+. +..++..+.+... + .++.++.+|++|+++++++++++.+.++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL-G-VEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc-C-CceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999999999864 3334444444332 2 2688999999999999999999999999
Q ss_pred CccEEEEcccCCC
Q 030706 159 YVDIWVFMSDLHS 171 (173)
Q Consensus 159 ~id~lVn~AG~~~ 171 (173)
++|++|||||+..
T Consensus 80 ~id~vi~~ag~~~ 92 (256)
T PRK12745 80 RIDCLVNNAGVGV 92 (256)
T ss_pred CCCEEEECCccCC
Confidence 9999999999753
No 150
>PLN00015 protochlorophyllide reductase
Probab=99.64 E-value=1.5e-15 Score=120.92 Aligned_cols=86 Identities=21% Similarity=0.283 Sum_probs=74.8
Q ss_pred EEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706 84 LITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI 162 (173)
Q Consensus 84 lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 162 (173)
|||||++|||+++++.|+++| ++|++++|+.+..++...++... ..++.++.+|++|.++++++++++.+.++++|+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 78 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV 78 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence 699999999999999999999 99999999987776666665422 235888899999999999999999988899999
Q ss_pred EEEcccCCC
Q 030706 163 WVFMSDLHS 171 (173)
Q Consensus 163 lVn~AG~~~ 171 (173)
||||||+..
T Consensus 79 lInnAG~~~ 87 (308)
T PLN00015 79 LVCNAAVYL 87 (308)
T ss_pred EEECCCcCC
Confidence 999999853
No 151
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.64 E-value=3.6e-15 Score=115.41 Aligned_cols=93 Identities=28% Similarity=0.434 Sum_probs=80.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
++++|+++|||++++||..++++|+++|++ |++++|+.+..+....++... + .++.++.+|++++++++++++.+.+
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL-G-AKAVFVQADLSDVEDCRRVVAAADE 80 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc-C-CeEEEEEccCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999998 999999877666665555432 3 2688889999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.++++|+||||||...
T Consensus 81 ~~g~id~li~~ag~~~ 96 (260)
T PRK06198 81 AFGRLDALVNAAGLTD 96 (260)
T ss_pred HhCCCCEEEECCCcCC
Confidence 9999999999999754
No 152
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.64 E-value=2.4e-15 Score=116.94 Aligned_cols=84 Identities=26% Similarity=0.296 Sum_probs=74.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.+|+++|||+++|||++++++|+++|++|++++++....+ ..++.++.+|++|+++++++++++.+.
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIEK 74 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999998765431 125778899999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||+..
T Consensus 75 ~g~id~li~~Ag~~~ 89 (266)
T PRK06171 75 FGRIDGLVNNAGINI 89 (266)
T ss_pred cCCCCEEEECCcccC
Confidence 999999999999753
No 153
>PRK07069 short chain dehydrogenase; Validated
Probab=99.64 E-value=4.4e-15 Score=114.17 Aligned_cols=89 Identities=22% Similarity=0.356 Sum_probs=75.9
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
++||||++|||+++++.|+++|++|++++|+ .+..++..+++....+...+.++.+|++|.++++++++++.+.++++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 7999999999999999999999999999998 555666665555443333466788999999999999999999999999
Q ss_pred EEEEcccCCC
Q 030706 162 IWVFMSDLHS 171 (173)
Q Consensus 162 ~lVn~AG~~~ 171 (173)
+||||||...
T Consensus 82 ~vi~~ag~~~ 91 (251)
T PRK07069 82 VLVNNAGVGS 91 (251)
T ss_pred EEEECCCcCC
Confidence 9999999764
No 154
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.64 E-value=4.5e-15 Score=114.28 Aligned_cols=94 Identities=28% Similarity=0.448 Sum_probs=76.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--VDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFA 153 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~ 153 (173)
++.+|+++|||+++|||+++++.|+++|++|+++.+..+. .+...+... ......+.+..+|+++ .++++.+++.+
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~~~~~~ 80 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEALVAAA 80 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence 4678999999999999999999999999998888877553 333333332 1110257888899998 99999999999
Q ss_pred HHhcCCccEEEEcccCCC
Q 030706 154 QKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 154 ~~~~g~id~lVn~AG~~~ 171 (173)
.+.+|++|+||||||+..
T Consensus 81 ~~~~g~id~lvnnAg~~~ 98 (251)
T COG1028 81 EEEFGRIDILVNNAGIAG 98 (251)
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 999999999999999875
No 155
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.64 E-value=5.4e-15 Score=112.93 Aligned_cols=93 Identities=26% Similarity=0.330 Sum_probs=80.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
++.+|+++|||++|+||..+++.|+++|++|++++|+++..+....++.... .++.++.+|++|++++.++++++.+.
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAG--GEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999877766666555432 25888899999999999999999988
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++.+|++|||||...
T Consensus 80 ~~~id~vi~~ag~~~ 94 (246)
T PRK05653 80 FGALDILVNNAGITR 94 (246)
T ss_pred hCCCCEEEECCCcCC
Confidence 999999999998754
No 156
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.64 E-value=4.4e-15 Score=115.16 Aligned_cols=90 Identities=29% Similarity=0.423 Sum_probs=79.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
+++++||||+||||+++++.|+++|++|++++|+....++..+++... +. ++.++.+|++|.++++++++++.+.+++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH-GG-EALVVPTDVSDAEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999999999987777666666543 32 6888899999999999999999999999
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|+||||||...
T Consensus 79 id~vi~~ag~~~ 90 (263)
T PRK06181 79 IDILVNNAGITM 90 (263)
T ss_pred CCEEEECCCccc
Confidence 999999999754
No 157
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.64 E-value=3.1e-15 Score=117.03 Aligned_cols=88 Identities=23% Similarity=0.301 Sum_probs=76.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
.+|+++||||+||||++++++|+++|++|++++|+.+..++..+.+ +. .+.++++|++|+++++++++++.+.++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----GD-RLLPLALDVTDRAAVFAAVETAVEHFG 76 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----cC-CeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999877655443322 22 578889999999999999999999999
Q ss_pred CccEEEEcccCCC
Q 030706 159 YVDIWVFMSDLHS 171 (173)
Q Consensus 159 ~id~lVn~AG~~~ 171 (173)
++|+||||||+..
T Consensus 77 ~~d~vi~~ag~~~ 89 (275)
T PRK08263 77 RLDIVVNNAGYGL 89 (275)
T ss_pred CCCEEEECCCCcc
Confidence 9999999999864
No 158
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.64 E-value=4.4e-15 Score=114.28 Aligned_cols=89 Identities=21% Similarity=0.398 Sum_probs=73.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
++++|+++||||++|||+++++.|+++|++|+++.+ +.+..+....+ .+ .++.++.+|++|+++++++++++.+
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~----~~-~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADE----LG-DRAIALQADVTDREQVQAMFATATE 76 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH----hC-CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 567899999999999999999999999999988765 34333333222 22 2588899999999999999999999
Q ss_pred hcCC-ccEEEEcccCC
Q 030706 156 NLKY-VDIWVFMSDLH 170 (173)
Q Consensus 156 ~~g~-id~lVn~AG~~ 170 (173)
.+|. +|++|||||+.
T Consensus 77 ~~g~~id~li~~ag~~ 92 (253)
T PRK08642 77 HFGKPITTVVNNALAD 92 (253)
T ss_pred HhCCCCeEEEECCCcc
Confidence 9987 99999999874
No 159
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.64 E-value=5.9e-15 Score=112.61 Aligned_cols=91 Identities=27% Similarity=0.420 Sum_probs=80.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+++++||||+|+||.+++++|+++|++|++++|+++..++..+++... .++.++.+|++|.++++.+++++.+.+
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56799999999999999999999999999999999987777666666533 258889999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|+||||+|...
T Consensus 81 ~~~d~vi~~ag~~~ 94 (237)
T PRK07326 81 GGLDVLIANAGVGH 94 (237)
T ss_pred CCCCEEEECCCCCC
Confidence 99999999998753
No 160
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.63 E-value=5.4e-15 Score=113.24 Aligned_cols=92 Identities=21% Similarity=0.352 Sum_probs=79.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC--HHHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE--GNEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~ 155 (173)
+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++..... ..+.++.+|+++ .++++++++++.+
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGH-PEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCC-CCcceEEeeecccchHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999998887777776654332 246778999975 6788999999998
Q ss_pred hc-CCccEEEEcccCC
Q 030706 156 NL-KYVDIWVFMSDLH 170 (173)
Q Consensus 156 ~~-g~id~lVn~AG~~ 170 (173)
.+ +++|+||||||..
T Consensus 83 ~~~~~id~vi~~ag~~ 98 (239)
T PRK08703 83 ATQGKLDGIVHCAGYF 98 (239)
T ss_pred HhCCCCCEEEEecccc
Confidence 88 8999999999975
No 161
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.63 E-value=6.6e-15 Score=113.15 Aligned_cols=90 Identities=26% Similarity=0.272 Sum_probs=76.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
.|+++||||++|||.++++.|+++|++|+++. ++.+..++...++... + .++.++.+|++|.++++++++++.+.++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA-G-GRACVVAGDVANEADVIAMFDAVQSAFG 79 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-C-CcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999998765 5555555555555443 2 2688999999999999999999999999
Q ss_pred CccEEEEcccCCC
Q 030706 159 YVDIWVFMSDLHS 171 (173)
Q Consensus 159 ~id~lVn~AG~~~ 171 (173)
++|+||||||+..
T Consensus 80 ~id~li~~ag~~~ 92 (248)
T PRK06947 80 RLDALVNNAGIVA 92 (248)
T ss_pred CCCEEEECCccCC
Confidence 9999999999763
No 162
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.63 E-value=7.1e-15 Score=113.38 Aligned_cols=92 Identities=25% Similarity=0.394 Sum_probs=76.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+++++++|||++||||.+++++|+++|++|+++ .|+.+..++....+... + .++.++.+|++|++++.++++++.+.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~d~~~i~~~~~~~~~~ 81 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN-G-GKAFLIEADLNSIDGVKKLVEQLKNE 81 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-C-CcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence 567999999999999999999999999998775 67766666655555432 2 25888999999999999999999887
Q ss_pred c------CCccEEEEcccCCC
Q 030706 157 L------KYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~------g~id~lVn~AG~~~ 171 (173)
+ +++|++|||||...
T Consensus 82 ~~~~~~~~~id~vi~~ag~~~ 102 (254)
T PRK12746 82 LQIRVGTSEIDILVNNAGIGT 102 (254)
T ss_pred hccccCCCCccEEEECCCCCC
Confidence 7 57999999999754
No 163
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.63 E-value=8e-15 Score=112.02 Aligned_cols=89 Identities=25% Similarity=0.259 Sum_probs=75.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSR-SAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
|++||||+++|||++++++|+++|++|+++.| +.+..++...++... + .++.++.+|++|+++++++++++.+.+++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL-G-FDFRVVEGDVSSFESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh-C-CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999888 544444444444332 2 25888999999999999999999999999
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|+||||||...
T Consensus 79 id~vi~~ag~~~ 90 (242)
T TIGR01829 79 IDVLVNNAGITR 90 (242)
T ss_pred CcEEEECCCCCC
Confidence 999999999764
No 164
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.63 E-value=6.8e-15 Score=112.63 Aligned_cols=91 Identities=29% Similarity=0.433 Sum_probs=79.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+.+|+++||||+++||.++++.|++.|++|+++ +|+.+..++....+... + .++.++.+|++|+++++++++++.+.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-G-GDAIAVKADVSSEEDVENLVEQIVEK 80 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999998 89877766666665542 2 36888999999999999999999999
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
++++|+||||+|..
T Consensus 81 ~~~id~vi~~ag~~ 94 (247)
T PRK05565 81 FGKIDILVNNAGIS 94 (247)
T ss_pred hCCCCEEEECCCcC
Confidence 99999999999976
No 165
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.63 E-value=8.7e-15 Score=113.15 Aligned_cols=88 Identities=28% Similarity=0.404 Sum_probs=77.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
+|+++||||+++||++++++|+++|++|++++|+.+..+...+.+. +.++.++.+|+.|.+++.++++++.+.+++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERGP 77 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999998877666555542 225888999999999999999999999999
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|++|||+|...
T Consensus 78 ~d~vi~~ag~~~ 89 (257)
T PRK07074 78 VDVLVANAGAAR 89 (257)
T ss_pred CCEEEECCCCCC
Confidence 999999999864
No 166
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.62 E-value=5e-15 Score=115.73 Aligned_cols=83 Identities=30% Similarity=0.364 Sum_probs=72.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
|++|||||+||||++++++|+++|++|++++|+.+..++. .. . .+.++.+|++|.++++++++++.+.++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~--~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 73 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL----AA--A--GFTAVQLDVNDGAALARLAEELEAEHGGL 73 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH--C--CCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 6899999999999999999999999999999987654432 11 1 35678999999999999999999999999
Q ss_pred cEEEEcccCCC
Q 030706 161 DIWVFMSDLHS 171 (173)
Q Consensus 161 d~lVn~AG~~~ 171 (173)
|+||||||+..
T Consensus 74 d~vi~~ag~~~ 84 (274)
T PRK05693 74 DVLINNAGYGA 84 (274)
T ss_pred CEEEECCCCCC
Confidence 99999999753
No 167
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.62 E-value=1.3e-14 Score=110.91 Aligned_cols=93 Identities=29% Similarity=0.381 Sum_probs=77.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
++.+|+++|||++|+||.+++++|+++|++|+++.++... .+....++... + .++.++.+|+++.+++.++++++.+
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL-G-GKALAVQGDVSDAESVERAVDEAKA 79 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-C-CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999888876543 34444444332 2 3688889999999999999999999
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.++++|+||||||...
T Consensus 80 ~~~~id~vi~~ag~~~ 95 (248)
T PRK05557 80 EFGGVDILVNNAGITR 95 (248)
T ss_pred HcCCCCEEEECCCcCC
Confidence 9999999999999754
No 168
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.62 E-value=8.6e-15 Score=113.32 Aligned_cols=90 Identities=28% Similarity=0.399 Sum_probs=77.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
++++|+++||||+|+||+.++++|+++|++|++++|+.+..++..++.. ..++.++.+|++|+++++.+++++.+.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999998766554443332 225788899999999999999999999
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
++++|+||||||..
T Consensus 84 ~~~~d~vi~~ag~~ 97 (264)
T PRK12829 84 FGGLDVLVNNAGIA 97 (264)
T ss_pred hCCCCEEEECCCCC
Confidence 99999999999986
No 169
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.61 E-value=7.1e-15 Score=114.86 Aligned_cols=89 Identities=29% Similarity=0.396 Sum_probs=76.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc--
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL-- 157 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-- 157 (173)
|+.++||||+.|||++.+++|+++|.+|++++|+.++++...+++.+.++ ..+..+.+|+++.+.+ .+.+.+..
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~---ye~i~~~l~~ 124 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEV---YEKLLEKLAG 124 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchh---HHHHHHHhcC
Confidence 48999999999999999999999999999999999999999999999877 4899999999988763 33333333
Q ss_pred CCccEEEEcccCCCC
Q 030706 158 KYVDIWVFMSDLHSS 172 (173)
Q Consensus 158 g~id~lVn~AG~~~~ 172 (173)
..|-+||||+|..++
T Consensus 125 ~~VgILVNNvG~~~~ 139 (312)
T KOG1014|consen 125 LDVGILVNNVGMSYD 139 (312)
T ss_pred CceEEEEecccccCC
Confidence 257789999999874
No 170
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.61 E-value=1.1e-14 Score=111.60 Aligned_cols=88 Identities=19% Similarity=0.287 Sum_probs=75.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIIC-SRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
|+++||||+|+||++++++|+++|++|+++ .|+.+..++...++... + .++.++.+|++|+++++++++++.+.+++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA-G-GKAFVLQADISDENQVVAMFTAIDQHDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC-C-CeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999999999874 56666666666655443 2 25888999999999999999999999999
Q ss_pred ccEEEEcccCC
Q 030706 160 VDIWVFMSDLH 170 (173)
Q Consensus 160 id~lVn~AG~~ 170 (173)
+|+||||||..
T Consensus 80 id~vi~~ag~~ 90 (247)
T PRK09730 80 LAALVNNAGIL 90 (247)
T ss_pred CCEEEECCCCC
Confidence 99999999975
No 171
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.61 E-value=9.1e-15 Score=114.31 Aligned_cols=87 Identities=24% Similarity=0.411 Sum_probs=75.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
.|++|||||+||||++++++|+++|++|++++|+.+..++..+. .+. ++.++.+|++|.++++++++++.+.+++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~----~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKAR----YGD-RLWVLQLDVTDSAAVRAVVDRAFAALGR 76 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----ccC-ceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999999987665443332 222 5888999999999999999999999999
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|+||||||+..
T Consensus 77 id~vi~~ag~~~ 88 (276)
T PRK06482 77 IDVVVSNAGYGL 88 (276)
T ss_pred CCEEEECCCCCC
Confidence 999999999864
No 172
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.61 E-value=1.5e-14 Score=111.39 Aligned_cols=90 Identities=28% Similarity=0.406 Sum_probs=78.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
+|++||||++|+||++++++|+++|++|++++|+.+..+....++... + .++.++.+|++|.++++++++++.+.+++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA-G-GSVIYLVADVTKEDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999999999999987766666555432 2 26888999999999999999999999999
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|+||||||+..
T Consensus 79 ~d~vi~~a~~~~ 90 (255)
T TIGR01963 79 LDILVNNAGIQH 90 (255)
T ss_pred CCEEEECCCCCC
Confidence 999999999754
No 173
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.61 E-value=2.5e-14 Score=109.97 Aligned_cols=92 Identities=28% Similarity=0.382 Sum_probs=75.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+.++++|||||+++||++++++|+++|++|++..++ .+...+....+... +. ++.++.+|++++++++++++++.+.
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN-GG-EGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc-CC-eeEEEEeccCCHHHHHHHHHHHHHH
Confidence 568999999999999999999999999999887754 33344444444332 22 5778899999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||+..
T Consensus 82 ~~~~d~vi~~ag~~~ 96 (252)
T PRK06077 82 YGVADILVNNAGLGL 96 (252)
T ss_pred cCCCCEEEECCCCCC
Confidence 999999999999744
No 174
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.60 E-value=1.5e-14 Score=111.51 Aligned_cols=85 Identities=26% Similarity=0.479 Sum_probs=74.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
++++||||+||||.++++.|+++|++|++++|+.+.+++....+ + .++.++.+|++|.++++++++++.+.++++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----G-DNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----c-cceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 36899999999999999999999999999999887655544332 2 258889999999999999999999999999
Q ss_pred cEEEEcccCC
Q 030706 161 DIWVFMSDLH 170 (173)
Q Consensus 161 d~lVn~AG~~ 170 (173)
|+||||||+.
T Consensus 76 d~vi~~ag~~ 85 (248)
T PRK10538 76 DVLVNNAGLA 85 (248)
T ss_pred CEEEECCCcc
Confidence 9999999975
No 175
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.59 E-value=2.8e-14 Score=109.34 Aligned_cols=92 Identities=23% Similarity=0.340 Sum_probs=75.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC----hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS----AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA 153 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 153 (173)
+.+++++||||+||||+++++.|+++|++|+++++. .+..++...++... + .++.++.+|++|.++++++++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~ 81 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA-G-GKALGLAFDVRDFAATRAALDAG 81 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc-C-CcEEEEEccCCCHHHHHHHHHHH
Confidence 567899999999999999999999999999987653 33333333444332 2 26888999999999999999999
Q ss_pred HHhcCCccEEEEcccCCC
Q 030706 154 QKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 154 ~~~~g~id~lVn~AG~~~ 171 (173)
.+.++++|+||||||+..
T Consensus 82 ~~~~~~~d~vi~~ag~~~ 99 (249)
T PRK12827 82 VEEFGRLDILVNNAGIAT 99 (249)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 999999999999999865
No 176
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.59 E-value=2.6e-14 Score=109.72 Aligned_cols=87 Identities=22% Similarity=0.286 Sum_probs=74.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
|+++||||++|||+++++.|+++|++|++++|+++..++..+++....+ .++.++.+|++|+++++++++++.+ .+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~---~~ 77 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGA-VAVSTHELDILDTASHAAFLDSLPA---LP 77 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcC-CeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence 6899999999999999999999999999999998877776666655433 3789999999999999999988754 46
Q ss_pred cEEEEcccCCC
Q 030706 161 DIWVFMSDLHS 171 (173)
Q Consensus 161 d~lVn~AG~~~ 171 (173)
|++|||||...
T Consensus 78 d~vv~~ag~~~ 88 (243)
T PRK07102 78 DIVLIAVGTLG 88 (243)
T ss_pred CEEEECCcCCC
Confidence 99999999754
No 177
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.59 E-value=1.1e-14 Score=108.36 Aligned_cols=85 Identities=33% Similarity=0.378 Sum_probs=73.3
Q ss_pred CCCEEEEEcCC-chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH-h
Q 030706 79 PPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK-N 156 (173)
Q Consensus 79 ~~k~~lItGa~-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~-~ 156 (173)
+.|.++|||++ ||||.+++++|.+.|+.|+.+.|..+...++..+ . .+..+.+||++++++..+..++.+ .
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~----~---gl~~~kLDV~~~~~V~~v~~evr~~~ 78 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ----F---GLKPYKLDVSKPEEVVTVSGEVRANP 78 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh----h---CCeeEEeccCChHHHHHHHHHHhhCC
Confidence 45789999865 8999999999999999999999988776554332 1 377889999999999999999988 7
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
+|.+|.|+||||..
T Consensus 79 ~Gkld~L~NNAG~~ 92 (289)
T KOG1209|consen 79 DGKLDLLYNNAGQS 92 (289)
T ss_pred CCceEEEEcCCCCC
Confidence 89999999999975
No 178
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.59 E-value=1.5e-14 Score=107.03 Aligned_cols=88 Identities=26% Similarity=0.423 Sum_probs=68.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh---hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA---ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+||||||.||||..++++|+++| .+|++++|+. ...++..++++.. + .++.++.+|++|+++++++++++.+.+
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~-g-~~v~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA-G-ARVEYVQCDVTDPEAVAAALAQLRQRF 79 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT-T--EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC-C-CceeeeccCccCHHHHHHHHHHHHhcc
Confidence 79999999999999999999998 5899999983 2344567777665 3 379999999999999999999999999
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
++|++|||+||+..
T Consensus 80 ~~i~gVih~ag~~~ 93 (181)
T PF08659_consen 80 GPIDGVIHAAGVLA 93 (181)
T ss_dssp S-EEEEEE------
T ss_pred CCcceeeeeeeeec
Confidence 99999999999864
No 179
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.58 E-value=3.5e-14 Score=108.55 Aligned_cols=87 Identities=21% Similarity=0.280 Sum_probs=74.0
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
++||||++|||+++++.|+++|++|+++++. .+..++..+++... + .++.++.+|++|.++++++++++.+.++++|
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ-G-GNARLLQFDVADRVACRTLLEADIAEHGAYY 78 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-C-CeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999999998865 34455555555543 2 2688999999999999999999999999999
Q ss_pred EEEEcccCCC
Q 030706 162 IWVFMSDLHS 171 (173)
Q Consensus 162 ~lVn~AG~~~ 171 (173)
++|||||+..
T Consensus 79 ~li~~ag~~~ 88 (239)
T TIGR01831 79 GVVLNAGITR 88 (239)
T ss_pred EEEECCCCCC
Confidence 9999999864
No 180
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.58 E-value=3e-14 Score=109.67 Aligned_cols=84 Identities=26% Similarity=0.303 Sum_probs=73.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++|||++++||.+++++|+++|++|++++|+. +.. .+ .++.++++|++|+++++++++++.+.
T Consensus 5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~-~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 73 (252)
T PRK08220 5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ-ED-YPFATFVLDVSDAAAVAQVCQRLLAE 73 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh-cC-CceEEEEecCCCHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999875 111 12 25888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||+..
T Consensus 74 ~~~id~vi~~ag~~~ 88 (252)
T PRK08220 74 TGPLDVLVNAAGILR 88 (252)
T ss_pred cCCCCEEEECCCcCC
Confidence 999999999999754
No 181
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.58 E-value=4.2e-14 Score=108.22 Aligned_cols=89 Identities=28% Similarity=0.312 Sum_probs=73.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
|+++|||++++||++++++|+++|++|++++|+.. ..++....+.. ...++.++.+|++|.++++++++++.+.+++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEGP 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999853 12222222211 1236888999999999999999999999999
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|+||||||...
T Consensus 81 id~vi~~ag~~~ 92 (245)
T PRK12824 81 VDILVNNAGITR 92 (245)
T ss_pred CCEEEECCCCCC
Confidence 999999999753
No 182
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.58 E-value=6.3e-14 Score=107.07 Aligned_cols=92 Identities=26% Similarity=0.413 Sum_probs=74.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+.+|++|||||+|+||.+++++|+++|++|+++.++... .+.....+... + .++.++.+|++|.++++++++++.+.
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-G-RRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-C-CceEEEECCcCCHHHHHHHHHHHHHH
Confidence 456899999999999999999999999998887765443 33333333332 2 25888999999999999999999988
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++.+|++|||||...
T Consensus 82 ~~~id~vi~~ag~~~ 96 (249)
T PRK12825 82 FGRIDILVNNAGIFE 96 (249)
T ss_pred cCCCCEEEECCccCC
Confidence 999999999999654
No 183
>PRK08324 short chain dehydrogenase; Validated
Probab=99.57 E-value=3.8e-14 Score=123.88 Aligned_cols=92 Identities=27% Similarity=0.340 Sum_probs=81.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.||+++||||+||||+++++.|+++|++|++++|+.+..+....++... .++.++.+|++|+++++++++++.+.
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~ 495 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA 495 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999987776666655432 25888999999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+|++|+||||||+..
T Consensus 496 ~g~iDvvI~~AG~~~ 510 (681)
T PRK08324 496 FGGVDIVVSNAGIAI 510 (681)
T ss_pred cCCCCEEEECCCCCC
Confidence 999999999999754
No 184
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.57 E-value=6.3e-14 Score=107.01 Aligned_cols=90 Identities=29% Similarity=0.341 Sum_probs=77.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|+++|||++++||.++++.|+++|++|++++|+++..+...+.+... + ++.++.+|+++.++++++++++.+.+
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-G--NIHYVVGDVSSTESARNVIEKAAKVL 79 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C--CeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999999999999887665554444322 2 47888999999999999999998888
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
+.+|.+|+|+|..
T Consensus 80 ~~id~ii~~ag~~ 92 (238)
T PRK05786 80 NAIDGLVVTVGGY 92 (238)
T ss_pred CCCCEEEEcCCCc
Confidence 9999999999864
No 185
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=99.57 E-value=3.2e-14 Score=108.33 Aligned_cols=94 Identities=18% Similarity=0.218 Sum_probs=85.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcC-----CEEEEEecChhhHHHHHHHHHHHhC--CceEEEEEeeCCCHHHHHHHHH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAG-----DNVIICSRSAERVDSAVQSLREEFG--EQHVWGTKCDVSEGNEVADLVA 151 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G-----~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~~~~v~~~~~ 151 (173)
..|+++|||+++|||+++|.+|++.. .++++++|+.++.++.+..+.+-++ ..++.++.+|+++..++.++..
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 35899999999999999999999864 2578899999999999999998777 4578999999999999999999
Q ss_pred HHHHhcCCccEEEEcccCCCC
Q 030706 152 FAQKNLKYVDIWVFMSDLHSS 172 (173)
Q Consensus 152 ~~~~~~g~id~lVn~AG~~~~ 172 (173)
++.++|.++|.+..|||++..
T Consensus 82 di~~rf~~ld~iylNAg~~~~ 102 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPN 102 (341)
T ss_pred HHHHHhhhccEEEEccccCCC
Confidence 999999999999999998753
No 186
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=99.56 E-value=5.6e-14 Score=113.90 Aligned_cols=92 Identities=18% Similarity=0.228 Sum_probs=72.7
Q ss_pred CCCCEEEEEcCCchHHHH--HHHHHHHcCCEEEEEecChhhHH------------HHHHHHHHHhCCceEEEEEeeCCCH
Q 030706 78 LPPYNVLITGSTKGIGYA--LAKEFLKAGDNVIICSRSAERVD------------SAVQSLREEFGEQHVWGTKCDVSEG 143 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~a--ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~Dv~~~ 143 (173)
..+|++||||+++|||.+ +++.| +.|++|+++++..+..+ ...+.+. ..+. .+..+.+|+++.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~-~a~~i~~DVss~ 115 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGL-YAKSINGDAFSD 115 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCC-ceEEEEcCCCCH
Confidence 346999999999999999 89999 99999888885432211 1222332 2232 477889999999
Q ss_pred HHHHHHHHHHHHhcCCccEEEEcccCCCC
Q 030706 144 NEVADLVAFAQKNLKYVDIWVFMSDLHSS 172 (173)
Q Consensus 144 ~~v~~~~~~~~~~~g~id~lVn~AG~~~~ 172 (173)
++++++++++.+.+|+||+||||+|...+
T Consensus 116 E~v~~lie~I~e~~G~IDiLVnSaA~~~r 144 (398)
T PRK13656 116 EIKQKVIELIKQDLGQVDLVVYSLASPRR 144 (398)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccCCC
Confidence 99999999999999999999999998743
No 187
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.55 E-value=3.9e-14 Score=108.82 Aligned_cols=83 Identities=30% Similarity=0.539 Sum_probs=74.9
Q ss_pred cCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc-CCccEE
Q 030706 87 GST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL-KYVDIW 163 (173)
Q Consensus 87 Ga~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id~l 163 (173)
|++ +|||+++|+.|+++|++|++++|+.+..++..+++.+..+. + ++.+|++++++++++++++.+.+ |+||+|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~-~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l 77 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA-E--VIQCDLSDEESVEALFDEAVERFGGRIDIL 77 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS-E--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC-c--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence 566 99999999999999999999999999887888888877664 4 48999999999999999999999 999999
Q ss_pred EEcccCCCC
Q 030706 164 VFMSDLHSS 172 (173)
Q Consensus 164 Vn~AG~~~~ 172 (173)
|||+|...+
T Consensus 78 V~~a~~~~~ 86 (241)
T PF13561_consen 78 VNNAGISPP 86 (241)
T ss_dssp EEEEESCTG
T ss_pred Eeccccccc
Confidence 999998753
No 188
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.55 E-value=8.6e-14 Score=116.16 Aligned_cols=90 Identities=21% Similarity=0.287 Sum_probs=73.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++|||+++|||++++++|+++|++|+++++.... +...++....+ ..++.+|++|.++++++++++.+.
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~--~~l~~~~~~~~---~~~~~~Dv~~~~~~~~~~~~~~~~ 281 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANRVG---GTALALDITAPDAPARIAEHLAER 281 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHHcC---CeEEEEeCCCHHHHHHHHHHHHHh
Confidence 3678999999999999999999999999999999885321 11222222222 346789999999999999999999
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||+..
T Consensus 282 ~g~id~vi~~AG~~~ 296 (450)
T PRK08261 282 HGGLDIVVHNAGITR 296 (450)
T ss_pred CCCCCEEEECCCcCC
Confidence 999999999999864
No 189
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.52 E-value=3.1e-14 Score=113.12 Aligned_cols=94 Identities=18% Similarity=0.260 Sum_probs=62.5
Q ss_pred CCCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHH---------HHhCC----ceEEEEEeeC
Q 030706 76 PMLPPYNVLITGST--KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR---------EEFGE----QHVWGTKCDV 140 (173)
Q Consensus 76 ~~~~~k~~lItGa~--~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~---------~~~~~----~~~~~~~~Dv 140 (173)
..++||++||||++ +|||+++|+.|+++|++|++.++.+ .++....... ...+. .++..+..|+
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 82 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF 82 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence 34789999999996 9999999999999999999987542 0100000000 00000 0011112233
Q ss_pred CCH------------------HHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706 141 SEG------------------NEVADLVAFAQKNLKYVDIWVFMSDLH 170 (173)
Q Consensus 141 ~~~------------------~~v~~~~~~~~~~~g~id~lVn~AG~~ 170 (173)
++. ++++++++++.+++|++|+||||||+.
T Consensus 83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~ 130 (299)
T PRK06300 83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANS 130 (299)
T ss_pred CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcC
Confidence 222 468999999999999999999999874
No 190
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.52 E-value=2.3e-13 Score=103.62 Aligned_cols=87 Identities=34% Similarity=0.550 Sum_probs=73.2
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
+||||++++||..++++|+++|++|++++|+. +..+.....+... + .++.++.+|++|+++++++++++.+.++++|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY-G-VKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-C-CceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 58999999999999999999999999998875 3444444445433 2 2588899999999999999999999999999
Q ss_pred EEEEcccCCC
Q 030706 162 IWVFMSDLHS 171 (173)
Q Consensus 162 ~lVn~AG~~~ 171 (173)
+||||||...
T Consensus 79 ~vi~~ag~~~ 88 (239)
T TIGR01830 79 ILVNNAGITR 88 (239)
T ss_pred EEEECCCCCC
Confidence 9999999754
No 191
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=99.51 E-value=3.6e-13 Score=101.24 Aligned_cols=93 Identities=24% Similarity=0.391 Sum_probs=82.2
Q ss_pred CCCCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGS--TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 77 ~~~~k~~lItGa--~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
.++||++||+|- ..+|++.||+.|.++|+++.+++.++ ++++.++++.+..+. ...++|||++.++++++|+++.
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s--~~v~~cDV~~d~~i~~~f~~i~ 79 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS--DLVLPCDVTNDESIDALFATIK 79 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC--CeEEecCCCCHHHHHHHHHHHH
Confidence 489999999995 47999999999999999999999887 677777777766554 5678999999999999999999
Q ss_pred HhcCCccEEEEcccCCCC
Q 030706 155 KNLKYVDIWVFMSDLHSS 172 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~~~ 172 (173)
+++|.+|+|||+-|+..+
T Consensus 80 ~~~g~lD~lVHsIaFa~k 97 (259)
T COG0623 80 KKWGKLDGLVHSIAFAPK 97 (259)
T ss_pred HhhCcccEEEEEeccCCh
Confidence 999999999999988763
No 192
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.51 E-value=2.8e-13 Score=104.57 Aligned_cols=84 Identities=23% Similarity=0.284 Sum_probs=68.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
+|++|||||+||||++++++|++.|++|++++|+.+..++........ +. ++.++.+|++|+++++++++ ++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~------~~ 73 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR-GL-ALRVEKLDLTDAIDRAQAAE------WD 73 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC-cceEEEeeCCCHHHHHHHhc------CC
Confidence 578999999999999999999999999999999876665554444332 22 58888999999998877653 37
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|+||||||+..
T Consensus 74 id~vi~~ag~~~ 85 (257)
T PRK09291 74 VDVLLNNAGIGE 85 (257)
T ss_pred CCEEEECCCcCC
Confidence 999999999754
No 193
>PRK12742 oxidoreductase; Provisional
Probab=99.50 E-value=2.9e-13 Score=103.23 Aligned_cols=83 Identities=24% Similarity=0.380 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS-AERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+++|++|||||++|||+++++.|+++|++|+++++. .+..++... .. .+.++.+|++|.+++.++++ .
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~----~~---~~~~~~~D~~~~~~~~~~~~----~ 72 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ----ET---GATAVQTDSADRDAVIDVVR----K 72 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH----Hh---CCeEEecCCCCHHHHHHHHH----H
Confidence 678999999999999999999999999999888764 333333222 21 24567899999998877664 3
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||+..
T Consensus 73 ~~~id~li~~ag~~~ 87 (237)
T PRK12742 73 SGALDILVVNAGIAV 87 (237)
T ss_pred hCCCcEEEECCCCCC
Confidence 578999999999753
No 194
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.50 E-value=4.1e-13 Score=102.80 Aligned_cols=84 Identities=24% Similarity=0.273 Sum_probs=69.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++|||++++||.++++.|+++|++|++++|+.+..++....+ .+.++.+|+++.++++++++.
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~---- 74 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA---- 74 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH----
Confidence 367899999999999999999999999999999999876654433221 245678999999988887765
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||...
T Consensus 75 ~~~~d~vi~~ag~~~ 89 (245)
T PRK07060 75 AGAFDGLVNCAGIAS 89 (245)
T ss_pred hCCCCEEEECCCCCC
Confidence 578999999999754
No 195
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.49 E-value=1.5e-13 Score=106.38 Aligned_cols=81 Identities=21% Similarity=0.251 Sum_probs=62.7
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
..+++|+++||||++|||+++++.|+++|++|++++|+.....+ .. .. .. ..++.+|++|.+++++
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~-~~--~~~~~~D~~~~~~~~~------- 75 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE-SP--NEWIKWECGKEESLDK------- 75 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc-CC--CeEEEeeCCCHHHHHH-------
Confidence 34678999999999999999999999999999999997622111 11 11 11 2567899999987654
Q ss_pred hcCCccEEEEcccCC
Q 030706 156 NLKYVDIWVFMSDLH 170 (173)
Q Consensus 156 ~~g~id~lVn~AG~~ 170 (173)
.++++|+||||||+.
T Consensus 76 ~~~~iDilVnnAG~~ 90 (245)
T PRK12367 76 QLASLDVLILNHGIN 90 (245)
T ss_pred hcCCCCEEEECCccC
Confidence 357899999999975
No 196
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.49 E-value=1.8e-13 Score=105.01 Aligned_cols=81 Identities=27% Similarity=0.435 Sum_probs=67.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
++++||||++|||++++++|+++|++|++++|+.+..++..+ .. .++.++.+|++|.++++++++++.. .+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~D~~~~~~~~~~~~~~~~---~~ 72 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QS--ANIFTLAFDVTDHPGTKAALSQLPF---IP 72 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hc--CCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence 689999999999999999999999999999998766544322 21 2478889999999999999887642 47
Q ss_pred cEEEEcccCC
Q 030706 161 DIWVFMSDLH 170 (173)
Q Consensus 161 d~lVn~AG~~ 170 (173)
|++|||||..
T Consensus 73 d~~i~~ag~~ 82 (240)
T PRK06101 73 ELWIFNAGDC 82 (240)
T ss_pred CEEEEcCccc
Confidence 9999999864
No 197
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.49 E-value=2.3e-13 Score=103.42 Aligned_cols=82 Identities=22% Similarity=0.331 Sum_probs=68.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
|+++|||+++|||.+++++|+++|++|++++|+++..++. .++ . ++.++.+|++|+++++++++++.+ +++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~----~--~~~~~~~D~~d~~~~~~~~~~~~~--~~i 72 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QAL----P--GVHIEKLDMNDPASLDQLLQRLQG--QRF 72 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-Hhc----c--ccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence 6899999999999999999999999999999987654432 111 1 466778999999999999988754 489
Q ss_pred cEEEEcccCCC
Q 030706 161 DIWVFMSDLHS 171 (173)
Q Consensus 161 d~lVn~AG~~~ 171 (173)
|+||||||+..
T Consensus 73 d~vi~~ag~~~ 83 (225)
T PRK08177 73 DLLFVNAGISG 83 (225)
T ss_pred CEEEEcCcccC
Confidence 99999999863
No 198
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.48 E-value=6.4e-13 Score=96.02 Aligned_cols=89 Identities=25% Similarity=0.329 Sum_probs=72.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH---HHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSA---VQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
|+++||||++|||.+++++|+++|+ .|++++|+.+..+.. ..++... + .++.++.+|++++++++++++++.+.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL-G-AEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc-C-CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999996 688888876543322 2333322 2 36888899999999999999999988
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++++|+||||||+..
T Consensus 79 ~~~id~li~~ag~~~ 93 (180)
T smart00822 79 LGPLRGVIHAAGVLD 93 (180)
T ss_pred cCCeeEEEEccccCC
Confidence 999999999999753
No 199
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.48 E-value=3.5e-13 Score=102.63 Aligned_cols=78 Identities=21% Similarity=0.358 Sum_probs=65.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
.++||||++|||+++++.|+++|++|++++|+.+..++..+++ .+.++.+|++|+++++++++++.+ ++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id 71 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLD 71 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence 4899999999999999999999999999999877665544332 245778999999999999887643 699
Q ss_pred EEEEcccC
Q 030706 162 IWVFMSDL 169 (173)
Q Consensus 162 ~lVn~AG~ 169 (173)
+||||||.
T Consensus 72 ~lv~~ag~ 79 (223)
T PRK05884 72 TIVNVPAP 79 (223)
T ss_pred EEEECCCc
Confidence 99999985
No 200
>PRK08264 short chain dehydrogenase; Validated
Probab=99.48 E-value=5e-13 Score=102.11 Aligned_cols=80 Identities=29% Similarity=0.388 Sum_probs=68.2
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
.+.+|+++||||+|+||++++++|+++|+ +|++++|+.+..++ .+ .++.++.+|++|.++++++++.
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~-~~~~~~~~D~~~~~~~~~~~~~--- 70 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LG-PRVVPLQLDVTDPASVAAAAEA--- 70 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cC-CceEEEEecCCCHHHHHHHHHh---
Confidence 36789999999999999999999999998 99999998765432 22 2588899999999998887764
Q ss_pred hcCCccEEEEcccC
Q 030706 156 NLKYVDIWVFMSDL 169 (173)
Q Consensus 156 ~~g~id~lVn~AG~ 169 (173)
++++|+||||||+
T Consensus 71 -~~~id~vi~~ag~ 83 (238)
T PRK08264 71 -ASDVTILVNNAGI 83 (238)
T ss_pred -cCCCCEEEECCCc
Confidence 4689999999998
No 201
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.48 E-value=3.7e-13 Score=100.99 Aligned_cols=92 Identities=26% Similarity=0.395 Sum_probs=71.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHc-CCEEE-EEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKA-GDNVI-ICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~-G~~V~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
..|.++||||++|||+.++++|.+. |-.++ .+.|+++...+..+.+.. ...+++.+++||++.++++.+++++.+-
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~--~d~rvHii~Ldvt~deS~~~~~~~V~~i 79 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSK--SDSRVHIIQLDVTCDESIDNFVQEVEKI 79 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhc--cCCceEEEEEecccHHHHHHHHHHHHhh
Confidence 3467999999999999999999976 55554 455667765222222211 2348999999999999999999999887
Q ss_pred --cCCccEEEEcccCCCC
Q 030706 157 --LKYVDIWVFMSDLHSS 172 (173)
Q Consensus 157 --~g~id~lVn~AG~~~~ 172 (173)
..++|+||||||+..+
T Consensus 80 Vg~~GlnlLinNaGi~~~ 97 (249)
T KOG1611|consen 80 VGSDGLNLLINNAGIALS 97 (249)
T ss_pred cccCCceEEEeccceeee
Confidence 4689999999998753
No 202
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.47 E-value=5.2e-13 Score=102.45 Aligned_cols=83 Identities=20% Similarity=0.267 Sum_probs=67.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH-HHHhc---
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF-AQKNL--- 157 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-~~~~~--- 157 (173)
+++||||+||||++++++|+++|++|++++|+.+.. . ....+ .++.++.+|++|.+++++++++ +.+.+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 75 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAAAG-ERLAEVELDLSDAAAAAAWLAGDLLAAFVDG 75 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhccC-CeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence 799999999999999999999999999999976431 1 11122 3688899999999999998877 55544
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
+++|++|||||+..
T Consensus 76 ~~~~~~v~~ag~~~ 89 (243)
T PRK07023 76 ASRVLLINNAGTVE 89 (243)
T ss_pred CCceEEEEcCcccC
Confidence 47999999999864
No 203
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.47 E-value=5.5e-13 Score=101.36 Aligned_cols=81 Identities=31% Similarity=0.428 Sum_probs=68.2
Q ss_pred EEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccEE
Q 030706 84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIW 163 (173)
Q Consensus 84 lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 163 (173)
+|||+++|||++++++|+++|++|++++|+.+..++...++.. + .++.++.+|++|++++++++++ ++++|+|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~-~~~~~~~~Dl~~~~~~~~~~~~----~~~id~l 73 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG--G-APVRTAALDITDEAAVDAFFAE----AGPFDHV 73 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--C-CceEEEEccCCCHHHHHHHHHh----cCCCCEE
Confidence 6999999999999999999999999999987766665555431 2 3588899999999999888875 4789999
Q ss_pred EEcccCCC
Q 030706 164 VFMSDLHS 171 (173)
Q Consensus 164 Vn~AG~~~ 171 (173)
|||||+..
T Consensus 74 i~~ag~~~ 81 (230)
T PRK07041 74 VITAADTP 81 (230)
T ss_pred EECCCCCC
Confidence 99999854
No 204
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.47 E-value=6.7e-13 Score=103.99 Aligned_cols=91 Identities=24% Similarity=0.248 Sum_probs=77.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
..+|.++|||+.+|+|+.+|++|.+.|.+|++.+..++..+....+.. ..+...+++||+++++++++.+.+.+..
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~l 102 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKHL 102 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence 678999999999999999999999999999999987777666655543 3478888999999999999998888766
Q ss_pred --CCccEEEEcccCCCC
Q 030706 158 --KYVDIWVFMSDLHSS 172 (173)
Q Consensus 158 --g~id~lVn~AG~~~~ 172 (173)
.++.+||||||+...
T Consensus 103 ~~~gLwglVNNAGi~~~ 119 (322)
T KOG1610|consen 103 GEDGLWGLVNNAGISGF 119 (322)
T ss_pred ccccceeEEeccccccc
Confidence 359999999998643
No 205
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.46 E-value=8.8e-13 Score=101.48 Aligned_cols=86 Identities=22% Similarity=0.349 Sum_probs=68.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
|+++||||+||||++++++|+++|++|++++|+. +..++ +....+ .++.++.+|++|.++++++++++.+.++.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTK----LAEQYN-SNLTFHSLDLQDVHELETNFNEILSSIQE 76 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHH----HHhccC-CceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence 6899999999999999999999999999999976 32222 222222 25888999999999999999998877653
Q ss_pred --cc--EEEEcccCCC
Q 030706 160 --VD--IWVFMSDLHS 171 (173)
Q Consensus 160 --id--~lVn~AG~~~ 171 (173)
++ ++|||||...
T Consensus 77 ~~~~~~~~v~~ag~~~ 92 (251)
T PRK06924 77 DNVSSIHLINNAGMVA 92 (251)
T ss_pred ccCCceEEEEcceecc
Confidence 22 8999999753
No 206
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.46 E-value=8.3e-13 Score=100.54 Aligned_cols=79 Identities=32% Similarity=0.307 Sum_probs=68.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
.+|+++||||+++||++++++|+++|++|++++|+.+.. .. ..++.+|++|.++++++++++.+.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------~~---~~~~~~D~~~~~~~~~~~~~~~~~~- 67 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----------FP---GELFACDLADIEQTAATLAQINEIH- 67 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------cC---ceEEEeeCCCHHHHHHHHHHHHHhC-
Confidence 578999999999999999999999999999999976430 11 2367899999999999999988876
Q ss_pred CccEEEEcccCCC
Q 030706 159 YVDIWVFMSDLHS 171 (173)
Q Consensus 159 ~id~lVn~AG~~~ 171 (173)
++|+||||||+..
T Consensus 68 ~~d~vi~~ag~~~ 80 (234)
T PRK07577 68 PVDAIVNNVGIAL 80 (234)
T ss_pred CCcEEEECCCCCC
Confidence 6899999999864
No 207
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.45 E-value=6.9e-13 Score=103.83 Aligned_cols=92 Identities=24% Similarity=0.270 Sum_probs=85.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
+.++||||++|||+++|..+..+|++|.++.|+..++.++.+++........+.+..+|+.|.+++..+++++.+..+.+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 68999999999999999999999999999999999999999999877665458899999999999999999999999999
Q ss_pred cEEEEcccCCCC
Q 030706 161 DIWVFMSDLHSS 172 (173)
Q Consensus 161 d~lVn~AG~~~~ 172 (173)
|.+|+|||+.-+
T Consensus 114 d~l~~cAG~~v~ 125 (331)
T KOG1210|consen 114 DNLFCCAGVAVP 125 (331)
T ss_pred ceEEEecCcccc
Confidence 999999998643
No 208
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.44 E-value=3.2e-13 Score=97.78 Aligned_cols=85 Identities=25% Similarity=0.243 Sum_probs=71.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.|+.+++||+..|||+++++.|++.|++|+.+.|+++.+..++++- +. .+..+..|+++++.+++.+ ..
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~----p~-~I~Pi~~Dls~wea~~~~l----~~ 74 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET----PS-LIIPIVGDLSAWEALFKLL----VP 74 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC----Cc-ceeeeEecccHHHHHHHhh----cc
Confidence 478999999999999999999999999999999999998877766542 32 4888899999877666554 34
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
.+.+|+||||||+.
T Consensus 75 v~pidgLVNNAgvA 88 (245)
T KOG1207|consen 75 VFPIDGLVNNAGVA 88 (245)
T ss_pred cCchhhhhccchhh
Confidence 47899999999985
No 209
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.43 E-value=1.2e-12 Score=107.74 Aligned_cols=82 Identities=24% Similarity=0.379 Sum_probs=65.2
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++|+++||||+||||+++++.|+++|++|++++|+.+..++.. ... . ..+..+.+|++|++++++.
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~-~-~~v~~v~~Dvsd~~~v~~~------- 242 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGE-D-LPVKTLHWQVGQEAALAEL------- 242 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhc-C-CCeEEEEeeCCCHHHHHHH-------
Confidence 467899999999999999999999999999999999876543221 111 1 1366788999999877654
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
++++|+||||||+.
T Consensus 243 l~~IDiLInnAGi~ 256 (406)
T PRK07424 243 LEKVDILIINHGIN 256 (406)
T ss_pred hCCCCEEEECCCcC
Confidence 35899999999975
No 210
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.43 E-value=7.6e-13 Score=100.89 Aligned_cols=76 Identities=26% Similarity=0.303 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+|+++|||+++|||++++++|+++|++|++++|+.... . . .++.++.+|++++ ++++.+.+
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~----~-~~~~~~~~D~~~~------~~~~~~~~ 65 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L----S-GNFHFLQLDLSDD------LEPLFDWV 65 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c----C-CcEEEEECChHHH------HHHHHHhh
Confidence 6789999999999999999999999999999999875321 0 1 2578889999887 45555667
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
+++|+||||||+.
T Consensus 66 ~~id~lv~~ag~~ 78 (235)
T PRK06550 66 PSVDILCNTAGIL 78 (235)
T ss_pred CCCCEEEECCCCC
Confidence 8999999999975
No 211
>PRK08017 oxidoreductase; Provisional
Probab=99.43 E-value=2e-12 Score=99.66 Aligned_cols=83 Identities=20% Similarity=0.190 Sum_probs=69.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc-CC
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL-KY 159 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~ 159 (173)
|+++||||+|+||+++++.|+++|++|++++|+.+..+.. ... .+..+.+|++|.++++.+++.+.+.. +.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~~----~~~~~~~D~~~~~~~~~~~~~i~~~~~~~ 74 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NSL----GFTGILLDLDDPESVERAADEVIALTDNR 74 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----HhC----CCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 6899999999999999999999999999999987665432 111 35678999999999999999887654 78
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|++|||||+..
T Consensus 75 ~~~ii~~ag~~~ 86 (256)
T PRK08017 75 LYGLFNNAGFGV 86 (256)
T ss_pred CeEEEECCCCCC
Confidence 999999999754
No 212
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.42 E-value=1.6e-12 Score=125.12 Aligned_cols=91 Identities=21% Similarity=0.238 Sum_probs=72.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChh-----------------------------------------
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAE----------------------------------------- 115 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~----------------------------------------- 115 (173)
-+++++|||||++|||++++++|+++ |++|++++|+..
T Consensus 1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813 1995 NSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence 46899999999999999999999998 699999999820
Q ss_pred ------hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706 116 ------RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 116 ------~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG~~~ 171 (173)
...+..+.+.. .+ .++.++.+||+|.++++++++++.+. ++||+||||||+..
T Consensus 2075 ~~~~~~ei~~~la~l~~-~G-~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~ 2133 (2582)
T TIGR02813 2075 PVLSSLEIAQALAAFKA-AG-ASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLA 2133 (2582)
T ss_pred ccchhHHHHHHHHHHHh-cC-CcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCC
Confidence 00111222222 23 26889999999999999999999877 68999999999865
No 213
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.40 E-value=3.7e-12 Score=108.09 Aligned_cols=89 Identities=22% Similarity=0.281 Sum_probs=71.6
Q ss_pred CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHh----C---CceEEEEEeeCCCHHHHH
Q 030706 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF----G---EQHVWGTKCDVSEGNEVA 147 (173)
Q Consensus 75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~---~~~~~~~~~Dv~~~~~v~ 147 (173)
..+.+||+++||||+|+||++++++|++.|++|++++|+.+..+....++.... + ..++.++.+|++|.++++
T Consensus 75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~ 154 (576)
T PLN03209 75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG 154 (576)
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH
Confidence 345678999999999999999999999999999999999887766655543210 1 125888999999998876
Q ss_pred HHHHHHHHhcCCccEEEEcccCC
Q 030706 148 DLVAFAQKNLKYVDIWVFMSDLH 170 (173)
Q Consensus 148 ~~~~~~~~~~g~id~lVn~AG~~ 170 (173)
+. ++++|+||||+|..
T Consensus 155 ~a-------LggiDiVVn~AG~~ 170 (576)
T PLN03209 155 PA-------LGNASVVICCIGAS 170 (576)
T ss_pred HH-------hcCCCEEEEccccc
Confidence 53 46899999999975
No 214
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.39 E-value=2.9e-12 Score=97.15 Aligned_cols=80 Identities=24% Similarity=0.324 Sum_probs=66.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
|+++|||++++||++++++|+++|++|++++|+.+..++. ... .+.++.+|+++.++++++++++.. +++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~----~~~----~~~~~~~D~~~~~~v~~~~~~~~~--~~~ 71 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL----QAL----GAEALALDVADPASVAGLAWKLDG--EAL 71 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH----Hhc----cceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence 6899999999999999999999999999999987654432 221 245789999999999998877632 479
Q ss_pred cEEEEcccCC
Q 030706 161 DIWVFMSDLH 170 (173)
Q Consensus 161 d~lVn~AG~~ 170 (173)
|++|||+|..
T Consensus 72 d~vi~~ag~~ 81 (222)
T PRK06953 72 DAAVYVAGVY 81 (222)
T ss_pred CEEEECCCcc
Confidence 9999999986
No 215
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.38 E-value=4.2e-12 Score=101.53 Aligned_cols=85 Identities=13% Similarity=0.030 Sum_probs=66.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
.+|++|||||+|+||.++++.|+++|++|+++.|+....+.....+.......++.++.+|++|.++++++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 76 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID------- 76 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence 4689999999999999999999999999999988876543332222111111358889999999998888774
Q ss_pred CccEEEEcccCC
Q 030706 159 YVDIWVFMSDLH 170 (173)
Q Consensus 159 ~id~lVn~AG~~ 170 (173)
++|+||||||..
T Consensus 77 ~~d~vih~A~~~ 88 (325)
T PLN02989 77 GCETVFHTASPV 88 (325)
T ss_pred CCCEEEEeCCCC
Confidence 589999999964
No 216
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.37 E-value=5.6e-12 Score=95.36 Aligned_cols=81 Identities=25% Similarity=0.377 Sum_probs=66.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
.|+++||||+|+||+++++.|+++ ++|++++|+.+..++..+. .. .+.++.+|++|+++++++++++ ++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~~----~~ 71 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAE----LP--GATPFPVDLTDPEAIAAAVEQL----GR 71 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHH----hc--cceEEecCCCCHHHHHHHHHhc----CC
Confidence 478999999999999999999999 9999999987654433222 12 3678899999999988877653 58
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|+|||+||...
T Consensus 72 id~vi~~ag~~~ 83 (227)
T PRK08219 72 LDVLVHNAGVAD 83 (227)
T ss_pred CCEEEECCCcCC
Confidence 999999999754
No 217
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.36 E-value=5.7e-12 Score=101.15 Aligned_cols=83 Identities=24% Similarity=0.246 Sum_probs=65.7
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
++++|+++||||+|+||.++++.|+++| ++|++++|+..........+ ...++.++.+|++|.+++.++++
T Consensus 1 ~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l~~~~~--- 73 (324)
T TIGR03589 1 MFNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERLTRALR--- 73 (324)
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHh---
Confidence 3578999999999999999999999986 78999998765433322222 12358889999999998887764
Q ss_pred HhcCCccEEEEcccCC
Q 030706 155 KNLKYVDIWVFMSDLH 170 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~ 170 (173)
++|+|||+||..
T Consensus 74 ----~iD~Vih~Ag~~ 85 (324)
T TIGR03589 74 ----GVDYVVHAAALK 85 (324)
T ss_pred ----cCCEEEECcccC
Confidence 589999999974
No 218
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.36 E-value=5.8e-12 Score=96.09 Aligned_cols=77 Identities=25% Similarity=0.343 Sum_probs=60.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
++++||||++|||++++++|+++| ..|++.+|+.... ....++.++++|++|.++++++. +.++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~~~Dls~~~~~~~~~----~~~~ 66 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----------FQHDNVQWHALDVTDEAEIKQLS----EQFT 66 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----------cccCceEEEEecCCCHHHHHHHH----HhcC
Confidence 479999999999999999999985 5676666654321 11236888999999999988753 4568
Q ss_pred CccEEEEcccCCC
Q 030706 159 YVDIWVFMSDLHS 171 (173)
Q Consensus 159 ~id~lVn~AG~~~ 171 (173)
++|+||||||+..
T Consensus 67 ~id~li~~aG~~~ 79 (235)
T PRK09009 67 QLDWLINCVGMLH 79 (235)
T ss_pred CCCEEEECCcccc
Confidence 9999999999874
No 219
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.35 E-value=7.6e-12 Score=101.19 Aligned_cols=85 Identities=18% Similarity=0.113 Sum_probs=67.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+++|++|||||+|+||.++++.|+++|++|++++|+..........+.. . .++.++.+|++|.+++.+++++.
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~-~~~~~~~~Dl~~~~~~~~~~~~~---- 74 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL--A-KKIEDHFGDIRDAAKLRKAIAEF---- 74 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh--c-CCceEEEccCCCHHHHHHHHhhc----
Confidence 5678999999999999999999999999999999876544333222221 1 24677899999999999988764
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
++|+|||+||..
T Consensus 75 -~~d~vih~A~~~ 86 (349)
T TIGR02622 75 -KPEIVFHLAAQP 86 (349)
T ss_pred -CCCEEEECCccc
Confidence 689999999853
No 220
>PLN02240 UDP-glucose 4-epimerase
Probab=99.32 E-value=2.2e-11 Score=98.27 Aligned_cols=89 Identities=19% Similarity=0.244 Sum_probs=67.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHh--CCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF--GEQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
++.+|+++||||+|+||.+++++|+++|++|+++++...........+.... ...++.++.+|++|++++++++++.
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~- 80 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST- 80 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence 5778999999999999999999999999999999875432222222222211 1125778899999999998887653
Q ss_pred HhcCCccEEEEcccCC
Q 030706 155 KNLKYVDIWVFMSDLH 170 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~ 170 (173)
.+|+|||+||..
T Consensus 81 ----~~d~vih~a~~~ 92 (352)
T PLN02240 81 ----RFDAVIHFAGLK 92 (352)
T ss_pred ----CCCEEEEccccC
Confidence 799999999864
No 221
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1e-11 Score=92.59 Aligned_cols=66 Identities=24% Similarity=0.342 Sum_probs=57.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
+++|||+++|||+++++.|+++ ++|++++|+.. .+++|++|++++++++++ ++++|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~----~~~id 57 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK----VGKVD 57 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh----cCCCC
Confidence 6999999999999999999999 99999998642 257899999999988765 47899
Q ss_pred EEEEcccCCC
Q 030706 162 IWVFMSDLHS 171 (173)
Q Consensus 162 ~lVn~AG~~~ 171 (173)
+||||||+..
T Consensus 58 ~lv~~ag~~~ 67 (199)
T PRK07578 58 AVVSAAGKVH 67 (199)
T ss_pred EEEECCCCCC
Confidence 9999999754
No 222
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.31 E-value=1.3e-11 Score=99.50 Aligned_cols=86 Identities=16% Similarity=0.105 Sum_probs=65.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHHHHHHHh---CCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV-DSAVQSLREEF---GEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
|++|||||+|+||.+++++|++.|++|++++|+.+.. ......+.... ...++.++.+|++|.+++.++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI--- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence 5899999999999999999999999999999875421 11111111100 0125788999999999998888764
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
++|+|||+|+...
T Consensus 78 --~~d~ViH~Aa~~~ 90 (343)
T TIGR01472 78 --KPTEIYNLAAQSH 90 (343)
T ss_pred --CCCEEEECCcccc
Confidence 5899999999753
No 223
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.30 E-value=1.4e-11 Score=99.13 Aligned_cols=90 Identities=17% Similarity=0.056 Sum_probs=68.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHHHHHH--HhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV-DSAVQSLRE--EFGEQHVWGTKCDVSEGNEVADLVAFA 153 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 153 (173)
.+++|++|||||+|+||.+++++|+++|++|++++|..... ....+.+.. .....++.++.+|++|.++++++++.+
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 35678999999999999999999999999999998865321 111222211 001125788999999999999988765
Q ss_pred HHhcCCccEEEEcccCCC
Q 030706 154 QKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 154 ~~~~g~id~lVn~AG~~~ 171 (173)
.+|+|||+||...
T Consensus 83 -----~~d~Vih~A~~~~ 95 (340)
T PLN02653 83 -----KPDEVYNLAAQSH 95 (340)
T ss_pred -----CCCEEEECCcccc
Confidence 5999999999753
No 224
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.30 E-value=2.8e-11 Score=96.74 Aligned_cols=86 Identities=16% Similarity=0.043 Sum_probs=66.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
..||+++||||+|+||.+++++|+++|++|+++.|+....+.............++.++.+|++|.++++++++
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------ 76 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence 45789999999999999999999999999999988765443322221111112357889999999998887775
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
.+|+|||+||..
T Consensus 77 -~~d~vih~A~~~ 88 (322)
T PLN02986 77 -GCDAVFHTASPV 88 (322)
T ss_pred -CCCEEEEeCCCc
Confidence 489999999864
No 225
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.29 E-value=8.3e-11 Score=86.78 Aligned_cols=85 Identities=12% Similarity=0.106 Sum_probs=70.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
+++||||+ |+|.++++.|++.|++|++++|+.+..+.....+.. . .++.++.+|++|+++++++++++.+.+|++|
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--~-~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id 77 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT--P-ESITPLPLDYHDDDALKLAIKSTIEKNGPFD 77 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--C-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence 68999998 677789999999999999999987766555443422 2 2588889999999999999999999999999
Q ss_pred EEEEcccCC
Q 030706 162 IWVFMSDLH 170 (173)
Q Consensus 162 ~lVn~AG~~ 170 (173)
++|+.+-+.
T Consensus 78 ~lv~~vh~~ 86 (177)
T PRK08309 78 LAVAWIHSS 86 (177)
T ss_pred EEEEecccc
Confidence 999876443
No 226
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.29 E-value=2.1e-11 Score=102.15 Aligned_cols=90 Identities=29% Similarity=0.335 Sum_probs=80.9
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
.++.||+++||||+|.||.++++++++.+ .++++.++++.+......++...++..++.++-+||.|.+.++.++++.
T Consensus 246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~- 324 (588)
T COG1086 246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH- 324 (588)
T ss_pred hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence 45799999999999999999999999998 6899999999998888888888777668999999999999999998765
Q ss_pred HhcCCccEEEEcccCC
Q 030706 155 KNLKYVDIWVFMSDLH 170 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~ 170 (173)
++|+|+|+|+.=
T Consensus 325 ----kvd~VfHAAA~K 336 (588)
T COG1086 325 ----KVDIVFHAAALK 336 (588)
T ss_pred ----CCceEEEhhhhc
Confidence 799999999863
No 227
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.29 E-value=7.4e-11 Score=97.10 Aligned_cols=90 Identities=19% Similarity=0.210 Sum_probs=68.4
Q ss_pred CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH--HHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS--AVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF 152 (173)
Q Consensus 75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 152 (173)
..+..+++++||||+|+||+++++.|+++|++|++++|+....+. ...++..... ++.++.+|++|.++++++++.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~--~v~~v~~Dl~d~~~l~~~~~~ 132 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELP--GAEVVFGDVTDADSLRKVLFS 132 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcC--CceEEEeeCCCHHHHHHHHHH
Confidence 344677899999999999999999999999999999998654321 1111111112 478889999999999988865
Q ss_pred HHHhcCCccEEEEcccC
Q 030706 153 AQKNLKYVDIWVFMSDL 169 (173)
Q Consensus 153 ~~~~~g~id~lVn~AG~ 169 (173)
. .+++|+||||+|.
T Consensus 133 ~---~~~~D~Vi~~aa~ 146 (390)
T PLN02657 133 E---GDPVDVVVSCLAS 146 (390)
T ss_pred h---CCCCcEEEECCcc
Confidence 3 1279999999874
No 228
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.27 E-value=6.2e-11 Score=99.01 Aligned_cols=88 Identities=17% Similarity=0.150 Sum_probs=65.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh---h----H---------HHHHHHHHHHhCCceEEEEEeeC
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE---R----V---------DSAVQSLREEFGEQHVWGTKCDV 140 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~---~----~---------~~~~~~l~~~~~~~~~~~~~~Dv 140 (173)
.+++|++|||||+|+||.+++++|+++|++|+++++... . . .+....+..... .++.++.+|+
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~v~~v~~Dl 122 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSG-KEIELYVGDI 122 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhC-CcceEEECCC
Confidence 367789999999999999999999999999999874211 0 0 011111111111 2588899999
Q ss_pred CCHHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706 141 SEGNEVADLVAFAQKNLKYVDIWVFMSDLH 170 (173)
Q Consensus 141 ~~~~~v~~~~~~~~~~~g~id~lVn~AG~~ 170 (173)
+|.+.+++++++. ++|+|||+|+..
T Consensus 123 ~d~~~v~~~l~~~-----~~D~ViHlAa~~ 147 (442)
T PLN02572 123 CDFEFLSEAFKSF-----EPDAVVHFGEQR 147 (442)
T ss_pred CCHHHHHHHHHhC-----CCCEEEECCCcc
Confidence 9999999888764 699999999753
No 229
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.26 E-value=4.8e-11 Score=95.08 Aligned_cols=84 Identities=17% Similarity=0.092 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHH-hCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREE-FGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
++|+++||||+|+||.+++++|+++|++|++++|+....... ..+... ....++.++.+|++|.+.++++++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 75 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFDSVVD------ 75 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence 468999999999999999999999999999999876543222 122111 111257889999999988877764
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
.+|+|||+||..
T Consensus 76 -~~d~Vih~A~~~ 87 (322)
T PLN02662 76 -GCEGVFHTASPF 87 (322)
T ss_pred -CCCEEEEeCCcc
Confidence 589999999864
No 230
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.24 E-value=9.3e-11 Score=94.99 Aligned_cols=84 Identities=19% Similarity=0.144 Sum_probs=66.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
..++++|||||+|+||.+++++|+++|++|++++|+.+..+.....+.. ..++.++.+|++|.+.+.++++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~------ 78 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVK------ 78 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHc------
Confidence 4567899999999999999999999999999999876554443333321 2358889999999988877763
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
.+|+|||+||...
T Consensus 79 -~~d~Vih~A~~~~ 91 (353)
T PLN02896 79 -GCDGVFHVAASME 91 (353)
T ss_pred -CCCEEEECCcccc
Confidence 4899999999753
No 231
>PLN02650 dihydroflavonol-4-reductase
Probab=99.20 E-value=1.6e-10 Score=93.53 Aligned_cols=85 Identities=18% Similarity=0.089 Sum_probs=64.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
..|++|||||+|+||.+++++|+++|++|++++|+.+..+.....+.......++.++.+|++|.+.++++++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------- 76 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------- 76 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence 4578999999999999999999999999999998765544332221111111257888999999988887764
Q ss_pred CccEEEEcccCC
Q 030706 159 YVDIWVFMSDLH 170 (173)
Q Consensus 159 ~id~lVn~AG~~ 170 (173)
.+|+|||+|+..
T Consensus 77 ~~d~ViH~A~~~ 88 (351)
T PLN02650 77 GCTGVFHVATPM 88 (351)
T ss_pred CCCEEEEeCCCC
Confidence 489999999864
No 232
>PLN02214 cinnamoyl-CoA reductase
Probab=99.20 E-value=2.2e-10 Score=92.59 Aligned_cols=84 Identities=17% Similarity=0.146 Sum_probs=65.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA-VQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+++|+++||||+|+||.++++.|+++|++|++++|+.+..... ...+.. ...++.++.+|++|.+++.++++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~----- 80 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID----- 80 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh-----
Confidence 4578999999999999999999999999999999976542221 122221 11257888999999998887764
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
++|+|||+||..
T Consensus 81 --~~d~Vih~A~~~ 92 (342)
T PLN02214 81 --GCDGVFHTASPV 92 (342)
T ss_pred --cCCEEEEecCCC
Confidence 589999999864
No 233
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.20 E-value=1.7e-10 Score=92.82 Aligned_cols=85 Identities=16% Similarity=0.093 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+++++||||+|+||.+++++|+++|++|+++.|+.+...... .+.......++.++.+|++|.+++.++++
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 79 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRALQELGDLKIFGADLTDEESFEAPIA------ 79 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHhcCCCCceEEEEcCCCChHHHHHHHh------
Confidence 44789999999999999999999999999998888764432221 11111111247888999999988877664
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
++|+|||+||..
T Consensus 80 -~~d~vih~A~~~ 91 (338)
T PLN00198 80 -GCDLVFHVATPV 91 (338)
T ss_pred -cCCEEEEeCCCC
Confidence 589999999853
No 234
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.19 E-value=1.3e-10 Score=92.28 Aligned_cols=84 Identities=18% Similarity=0.121 Sum_probs=68.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH--HHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA--VQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.++.++||||+|.||..+++.|+++||+|..+.|+++..+.. ..++. ....+...+..|+.|+++++++++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~--~a~~~l~l~~aDL~d~~sf~~ai~----- 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLE--GAKERLKLFKADLLDEGSFDKAID----- 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcc--cCcccceEEeccccccchHHHHHh-----
Confidence 578999999999999999999999999999999998774332 33332 223368899999999999998886
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
+.|+|+|.|....
T Consensus 78 --gcdgVfH~Asp~~ 90 (327)
T KOG1502|consen 78 --GCDGVFHTASPVD 90 (327)
T ss_pred --CCCEEEEeCccCC
Confidence 5899999986543
No 235
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.18 E-value=4.8e-11 Score=93.79 Aligned_cols=82 Identities=24% Similarity=0.381 Sum_probs=61.1
Q ss_pred EEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceE----EEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHV----WGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~----~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+|||||+|.||.+++++|++.+ .+|+++++++..+-+...++....+..++ ..+.+|++|.+.+++++++.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~---- 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY---- 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence 6999999999999999999998 68999999999988888888655443223 34578999999999988765
Q ss_pred CCccEEEEcccC
Q 030706 158 KYVDIWVFMSDL 169 (173)
Q Consensus 158 g~id~lVn~AG~ 169 (173)
++|+|+|.|++
T Consensus 77 -~pdiVfHaAA~ 87 (293)
T PF02719_consen 77 -KPDIVFHAAAL 87 (293)
T ss_dssp -T-SEEEE----
T ss_pred -CCCEEEEChhc
Confidence 89999999986
No 236
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.17 E-value=2.7e-10 Score=91.43 Aligned_cols=84 Identities=19% Similarity=0.287 Sum_probs=63.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
+++||||+|+||.++++.|+++|++|+++++...........+....+ .++.++.+|++|.+++.++++. .++|
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~-----~~~d 75 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGG-KHPTFVEGDIRNEALLTEILHD-----HAID 75 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcC-CCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence 589999999999999999999999999987653332222222222222 2467788999999998887754 3699
Q ss_pred EEEEcccCCC
Q 030706 162 IWVFMSDLHS 171 (173)
Q Consensus 162 ~lVn~AG~~~ 171 (173)
+|||+||...
T Consensus 76 ~vvh~a~~~~ 85 (338)
T PRK10675 76 TVIHFAGLKA 85 (338)
T ss_pred EEEECCcccc
Confidence 9999998753
No 237
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.13 E-value=5.9e-10 Score=90.26 Aligned_cols=88 Identities=20% Similarity=0.183 Sum_probs=65.2
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC---CceEEEEEeeCCCHHHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG---EQHVWGTKCDVSEGNEVADLVAF 152 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~ 152 (173)
..+.+|+++||||+|.||..++++|+++|++|++++|...........+....+ ..++.++.+|+.|.+.+.++++
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~- 89 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK- 89 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence 346778999999999999999999999999999999865332222222211111 1257889999999888777664
Q ss_pred HHHhcCCccEEEEcccCC
Q 030706 153 AQKNLKYVDIWVFMSDLH 170 (173)
Q Consensus 153 ~~~~~g~id~lVn~AG~~ 170 (173)
.+|+|||.|+..
T Consensus 90 ------~~d~ViHlAa~~ 101 (348)
T PRK15181 90 ------NVDYVLHQAALG 101 (348)
T ss_pred ------CCCEEEECcccc
Confidence 489999999864
No 238
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=99.12 E-value=1.9e-10 Score=88.05 Aligned_cols=76 Identities=20% Similarity=0.239 Sum_probs=60.3
Q ss_pred EEEEEcC-CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 82 NVLITGS-TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 82 ~~lItGa-~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
+=.||.. +||||+++|+.|+++|++|+++++... +.. .....+|+++.++++++++++.+.+|++
T Consensus 16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~------~~~~~~Dv~d~~s~~~l~~~v~~~~g~i 81 (227)
T TIGR02114 16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP------EPHPNLSIREIETTKDLLITLKELVQEH 81 (227)
T ss_pred ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc------ccCCcceeecHHHHHHHHHHHHHHcCCC
Confidence 4456664 789999999999999999999876311 100 0013589999999999999999999999
Q ss_pred cEEEEcccCCC
Q 030706 161 DIWVFMSDLHS 171 (173)
Q Consensus 161 d~lVn~AG~~~ 171 (173)
|+||||||+..
T Consensus 82 DiLVnnAgv~d 92 (227)
T TIGR02114 82 DILIHSMAVSD 92 (227)
T ss_pred CEEEECCEecc
Confidence 99999999753
No 239
>PLN02686 cinnamoyl-CoA reductase
Probab=99.11 E-value=9.2e-10 Score=89.89 Aligned_cols=86 Identities=15% Similarity=0.183 Sum_probs=64.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHh----CCceEEEEEeeCCCHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEF----GEQHVWGTKCDVSEGNEVADLVAF 152 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~ 152 (173)
..++|++|||||+|+||.++++.|+++|++|+++.|+.+..+.. .++.... ....+.++.+|++|.+++.++++.
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~ 128 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG 128 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence 36689999999999999999999999999999888876544333 2222111 012477889999999998887753
Q ss_pred HHHhcCCccEEEEcccCC
Q 030706 153 AQKNLKYVDIWVFMSDLH 170 (173)
Q Consensus 153 ~~~~~g~id~lVn~AG~~ 170 (173)
+|.+||.|++.
T Consensus 129 -------~d~V~hlA~~~ 139 (367)
T PLN02686 129 -------CAGVFHTSAFV 139 (367)
T ss_pred -------ccEEEecCeee
Confidence 57777777653
No 240
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.11 E-value=3.8e-10 Score=91.25 Aligned_cols=84 Identities=18% Similarity=0.211 Sum_probs=60.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEE-EEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVI-ICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
|++|||||+|+||.++++.|.++|+.++ ++++.... .. ...+.......++.++.+|++|.+++++++++. +
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~ 74 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GN-LMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----Q 74 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cc-hhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence 5799999999999999999999998744 55554321 11 111111111124778899999999998888752 6
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|+|||+||...
T Consensus 75 ~D~Vih~A~~~~ 86 (355)
T PRK10217 75 PDCVMHLAAESH 86 (355)
T ss_pred CCEEEECCcccC
Confidence 999999999753
No 241
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.07 E-value=9.2e-10 Score=86.85 Aligned_cols=86 Identities=21% Similarity=0.298 Sum_probs=69.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhC-CceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFG-EQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
++++|||||+|.||.+++.+|.+.|+.|+++|.-..........++...+ ..++.+++.|+.|.+.++++|++.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----- 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----- 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence 57899999999999999999999999999998644333333444433322 237999999999999999999886
Q ss_pred CccEEEEcccCC
Q 030706 159 YVDIWVFMSDLH 170 (173)
Q Consensus 159 ~id~lVn~AG~~ 170 (173)
.+|.|+|-|+..
T Consensus 77 ~fd~V~Hfa~~~ 88 (343)
T KOG1371|consen 77 KFDAVMHFAALA 88 (343)
T ss_pred CCceEEeehhhh
Confidence 699999998864
No 242
>PLN02427 UDP-apiose/xylose synthase
Probab=99.07 E-value=9.3e-10 Score=90.19 Aligned_cols=86 Identities=9% Similarity=0.253 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+.++++||||+|.||..+++.|+++ |++|++++|+.+.............. .++.++.+|++|.+.++++++
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~-~~~~~~~~Dl~d~~~l~~~~~----- 85 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWS-GRIQFHRINIKHDSRLEGLIK----- 85 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCC-CCeEEEEcCCCChHHHHHHhh-----
Confidence 44568999999999999999999998 58999999875443222111000011 258889999999988877664
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
.+|+|||+|+...
T Consensus 86 --~~d~ViHlAa~~~ 98 (386)
T PLN02427 86 --MADLTINLAAICT 98 (386)
T ss_pred --cCCEEEEcccccC
Confidence 4799999998643
No 243
>PLN02583 cinnamoyl-CoA reductase
Probab=99.04 E-value=3.1e-09 Score=84.22 Aligned_cols=82 Identities=15% Similarity=0.157 Sum_probs=60.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER--VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
++|+++||||+|+||.+++++|+++|++|+++.|+... ..+....+... + .++.++.+|++|.+++.+++.
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~-~-~~~~~~~~Dl~d~~~~~~~l~----- 77 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE-E-ERLKVFDVDPLDYHSILDALK----- 77 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC-C-CceEEEEecCCCHHHHHHHHc-----
Confidence 46899999999999999999999999999999986422 22222222111 1 257888999999988866553
Q ss_pred cCCccEEEEcccC
Q 030706 157 LKYVDIWVFMSDL 169 (173)
Q Consensus 157 ~g~id~lVn~AG~ 169 (173)
..|+++|.++.
T Consensus 78 --~~d~v~~~~~~ 88 (297)
T PLN02583 78 --GCSGLFCCFDP 88 (297)
T ss_pred --CCCEEEEeCcc
Confidence 57888886653
No 244
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.04 E-value=1.4e-09 Score=86.04 Aligned_cols=82 Identities=18% Similarity=0.183 Sum_probs=60.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhh-HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAER-VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
+++||||+|+||.+++++|++.| ++|+++++.... ..+....+. ...++.++.+|++|++++.++++..
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~----- 72 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---DNPRYRFVKGDIGDRELVSRLFTEH----- 72 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---cCCCcEEEEcCCcCHHHHHHHHhhc-----
Confidence 38999999999999999999987 789888764211 111111221 1125778899999999998887653
Q ss_pred CccEEEEcccCCC
Q 030706 159 YVDIWVFMSDLHS 171 (173)
Q Consensus 159 ~id~lVn~AG~~~ 171 (173)
++|+|||+||...
T Consensus 73 ~~d~vi~~a~~~~ 85 (317)
T TIGR01181 73 QPDAVVHFAAESH 85 (317)
T ss_pred CCCEEEEcccccC
Confidence 6999999998753
No 245
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.04 E-value=1.5e-09 Score=86.15 Aligned_cols=81 Identities=17% Similarity=0.249 Sum_probs=61.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
+++||||+|+||..+++.|+++|++|+++++...........+... + ++.++.+|+++.++++++++. +++|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~D~~~~~~~~~~~~~-----~~~d 72 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-T--RVTFVEGDLRDRELLDRLFEE-----HKID 72 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-c--ceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence 3799999999999999999999999998876433222222222111 1 467788999999999888764 4799
Q ss_pred EEEEcccCC
Q 030706 162 IWVFMSDLH 170 (173)
Q Consensus 162 ~lVn~AG~~ 170 (173)
++|||||..
T Consensus 73 ~vv~~ag~~ 81 (328)
T TIGR01179 73 AVIHFAGLI 81 (328)
T ss_pred EEEECcccc
Confidence 999999975
No 246
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=99.02 E-value=1.6e-09 Score=89.15 Aligned_cols=79 Identities=27% Similarity=0.377 Sum_probs=61.8
Q ss_pred CCCCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeC
Q 030706 77 MLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV 140 (173)
Q Consensus 77 ~~~~k~~lItGa----------------~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv 140 (173)
.+.||++||||| +|++|+++|+.|+++|++|++++++.+ .+ ... . ...+|+
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~~~-~--~~~~dv 251 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------TPA-G--VKRIDV 251 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------CCC-C--cEEEcc
Confidence 478999999999 566999999999999999999988652 11 011 1 236799
Q ss_pred CCHHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706 141 SEGNEVADLVAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 141 ~~~~~v~~~~~~~~~~~g~id~lVn~AG~~~ 171 (173)
++.+++.+.++ +.++.+|++|||||+..
T Consensus 252 ~~~~~~~~~v~---~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 252 ESAQEMLDAVL---AALPQADIFIMAAAVAD 279 (399)
T ss_pred CCHHHHHHHHH---HhcCCCCEEEEcccccc
Confidence 98888776665 55789999999999853
No 247
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.02 E-value=2.5e-09 Score=86.38 Aligned_cols=82 Identities=16% Similarity=0.229 Sum_probs=58.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
++|||||+|+||.+++++|+++|+. |+.+++...... ...+.......++.++.+|++|.+++++++++. ++
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~ 74 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN--LESLADVSDSERYVFEHADICDRAELDRIFAQH-----QP 74 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch--HHHHHhcccCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence 5899999999999999999999975 555554321100 111111111225778899999999999888752 79
Q ss_pred cEEEEcccCC
Q 030706 161 DIWVFMSDLH 170 (173)
Q Consensus 161 d~lVn~AG~~ 170 (173)
|+|||+||..
T Consensus 75 d~vih~A~~~ 84 (352)
T PRK10084 75 DAVMHLAAES 84 (352)
T ss_pred CEEEECCccc
Confidence 9999999975
No 248
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.99 E-value=4.5e-09 Score=81.28 Aligned_cols=81 Identities=17% Similarity=0.303 Sum_probs=59.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~ 156 (173)
..+++++||||+|+||+.+++.|++.|++|+++.|+.+....... . . .++.++.+|++|. +.+ .+.+.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~-~-~~~~~~~~Dl~d~~~~l---~~~~~-- 83 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----Q-D-PSLQIVRADVTEGSDKL---VEAIG-- 83 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----c-C-CceEEEEeeCCCCHHHH---HHHhh--
Confidence 446799999999999999999999999999999998765432211 1 1 2578889999983 322 22220
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
.++|+||+|+|..
T Consensus 84 -~~~d~vi~~~g~~ 96 (251)
T PLN00141 84 -DDSDAVICATGFR 96 (251)
T ss_pred -cCCCEEEECCCCC
Confidence 2699999999874
No 249
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.99 E-value=2.5e-09 Score=83.75 Aligned_cols=77 Identities=19% Similarity=0.230 Sum_probs=63.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
++|||||+|-||.+++.+|++.|++|+++|.-...-.+.+... .+.+++.|+.|.+.++++|++. +||
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~-----~id 69 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEEN-----KID 69 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhc-----CCC
Confidence 6899999999999999999999999999997544333333221 1568899999999999998875 899
Q ss_pred EEEEcccCC
Q 030706 162 IWVFMSDLH 170 (173)
Q Consensus 162 ~lVn~AG~~ 170 (173)
.|||.||..
T Consensus 70 aViHFAa~~ 78 (329)
T COG1087 70 AVVHFAASI 78 (329)
T ss_pred EEEECcccc
Confidence 999999864
No 250
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.98 E-value=6.2e-09 Score=76.45 Aligned_cols=72 Identities=24% Similarity=0.291 Sum_probs=62.2
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI 162 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 162 (173)
++|+||+|.+|+.++++|+++|++|+++.|++++.++ ..++.++.+|+.|++++.+.++ +.|+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~ 63 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADA 63 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcch
Confidence 6899999999999999999999999999999887654 1368999999999988877664 6899
Q ss_pred EEEcccCCC
Q 030706 163 WVFMSDLHS 171 (173)
Q Consensus 163 lVn~AG~~~ 171 (173)
+|+++|...
T Consensus 64 vi~~~~~~~ 72 (183)
T PF13460_consen 64 VIHAAGPPP 72 (183)
T ss_dssp EEECCHSTT
T ss_pred hhhhhhhhc
Confidence 999997543
No 251
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.97 E-value=8.8e-09 Score=78.16 Aligned_cols=76 Identities=30% Similarity=0.435 Sum_probs=63.0
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI 162 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 162 (173)
+|||||+|.||.+++++|.++|+.|+.+.+............ ++.++.+|+.|.+.++++++.. .+|.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-------~~~~~~~dl~~~~~~~~~~~~~-----~~d~ 68 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-------NVEFVIGDLTDKEQLEKLLEKA-----NIDV 68 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-------TEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-------eEEEEEeecccccccccccccc-----CceE
Confidence 699999999999999999999999888887765432222111 4888999999999999999876 7999
Q ss_pred EEEcccCC
Q 030706 163 WVFMSDLH 170 (173)
Q Consensus 163 lVn~AG~~ 170 (173)
|||+||..
T Consensus 69 vi~~a~~~ 76 (236)
T PF01370_consen 69 VIHLAAFS 76 (236)
T ss_dssp EEEEBSSS
T ss_pred EEEeeccc
Confidence 99999875
No 252
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.92 E-value=8.5e-09 Score=81.70 Aligned_cols=82 Identities=16% Similarity=0.244 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecCh---hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSA---ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA 153 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 153 (173)
+++|+++|+|+ ||+|++++..|++.|++ |++++|+. ++.++..+++...++ .+.+..+|+++.++++..++
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~--~~~~~~~d~~~~~~~~~~~~-- 198 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP--ECIVNVYDLNDTEKLKAEIA-- 198 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC--CceeEEechhhhhHHHhhhc--
Confidence 57899999999 69999999999999985 99999986 566666666644333 34555678887776655443
Q ss_pred HHhcCCccEEEEcccC
Q 030706 154 QKNLKYVDIWVFMSDL 169 (173)
Q Consensus 154 ~~~~g~id~lVn~AG~ 169 (173)
..|+||||.-+
T Consensus 199 -----~~DilINaTp~ 209 (289)
T PRK12548 199 -----SSDILVNATLV 209 (289)
T ss_pred -----cCCEEEEeCCC
Confidence 46999998643
No 253
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.91 E-value=8e-09 Score=82.59 Aligned_cols=73 Identities=19% Similarity=0.156 Sum_probs=58.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
+++||||+|.||.+++++|.++|++|.+++|+.+.... +.. ..+.++.+|++|++++.++++ ++|
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~----~~v~~v~~Dl~d~~~l~~al~-------g~d 66 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE----WGAELVYGDLSLPETLPPSFK-------GVT 66 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh----cCCEEEECCCCCHHHHHHHHC-------CCC
Confidence 69999999999999999999999999999998654321 111 147788999999988877664 589
Q ss_pred EEEEcccC
Q 030706 162 IWVFMSDL 169 (173)
Q Consensus 162 ~lVn~AG~ 169 (173)
+|||+++.
T Consensus 67 ~Vi~~~~~ 74 (317)
T CHL00194 67 AIIDASTS 74 (317)
T ss_pred EEEECCCC
Confidence 99998764
No 254
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.91 E-value=3.7e-09 Score=84.10 Aligned_cols=75 Identities=21% Similarity=0.236 Sum_probs=60.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
++++||||+|+||..+++.|+++|++|++++|+.+.... +. ...+.++.+|++|.+++.++++ .+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~----~~~~~~~~~D~~~~~~l~~~~~-------~~ 65 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE----GLDVEIVEGDLRDPASLRKAVA-------GC 65 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc----cCCceEEEeeCCCHHHHHHHHh-------CC
Confidence 368999999999999999999999999999997654321 11 1147788999999998877664 57
Q ss_pred cEEEEcccCC
Q 030706 161 DIWVFMSDLH 170 (173)
Q Consensus 161 d~lVn~AG~~ 170 (173)
|+|||+|+..
T Consensus 66 d~vi~~a~~~ 75 (328)
T TIGR03466 66 RALFHVAADY 75 (328)
T ss_pred CEEEEeceec
Confidence 9999999753
No 255
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.83 E-value=2.6e-08 Score=87.18 Aligned_cols=87 Identities=16% Similarity=0.211 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKA--GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
.++|++|||||+|.||.++++.|+++ |++|+++++.... ... ..+.......++.++.+|++|.+.+.+++..
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~-~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--- 78 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNL-KNLNPSKSSPNFKFVKGDIASADLVNYLLIT--- 78 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chh-hhhhhcccCCCeEEEECCCCChHHHHHHHhh---
Confidence 45689999999999999999999998 5789988874311 111 1111111122588899999999887765532
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.++|+|||+|+...
T Consensus 79 --~~~D~ViHlAa~~~ 92 (668)
T PLN02260 79 --EGIDTIMHFAAQTH 92 (668)
T ss_pred --cCCCEEEECCCccC
Confidence 37999999999754
No 256
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.83 E-value=1.1e-08 Score=81.17 Aligned_cols=65 Identities=25% Similarity=0.302 Sum_probs=54.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
++|||||+|.||.++++.|.++| +|+.++|... .+..|++|.+.+++++++. ++|
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~D 56 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RPD 56 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CCC
Confidence 69999999999999999999999 7888887421 2356999999998887753 689
Q ss_pred EEEEcccCCC
Q 030706 162 IWVFMSDLHS 171 (173)
Q Consensus 162 ~lVn~AG~~~ 171 (173)
+|||+|+...
T Consensus 57 ~Vih~Aa~~~ 66 (299)
T PRK09987 57 VIVNAAAHTA 66 (299)
T ss_pred EEEECCccCC
Confidence 9999999764
No 257
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.82 E-value=2.3e-08 Score=81.78 Aligned_cols=82 Identities=13% Similarity=0.001 Sum_probs=60.8
Q ss_pred CCCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706 74 REPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFA 153 (173)
Q Consensus 74 ~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 153 (173)
..++-.+|+++||||+|.||.++++.|.++|++|++++|..... +... . ..+.++.+|++|.+.+..+++
T Consensus 15 ~~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~-~-~~~~~~~~Dl~d~~~~~~~~~-- 84 (370)
T PLN02695 15 PYWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSED-M-FCHEFHLVDLRVMENCLKVTK-- 84 (370)
T ss_pred CCCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccc-c-ccceEEECCCCCHHHHHHHHh--
Confidence 33445678999999999999999999999999999999864321 0000 0 024567889999887666542
Q ss_pred HHhcCCccEEEEcccCC
Q 030706 154 QKNLKYVDIWVFMSDLH 170 (173)
Q Consensus 154 ~~~~g~id~lVn~AG~~ 170 (173)
.+|+|||+|+..
T Consensus 85 -----~~D~Vih~Aa~~ 96 (370)
T PLN02695 85 -----GVDHVFNLAADM 96 (370)
T ss_pred -----CCCEEEEccccc
Confidence 589999999754
No 258
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.81 E-value=3.8e-08 Score=79.50 Aligned_cols=77 Identities=19% Similarity=0.192 Sum_probs=57.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC-CHHHHHHHHHHHHHhcC
Q 030706 81 YNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS-EGNEVADLVAFAQKNLK 158 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g 158 (173)
++++||||+|.||..++++|++. |++|++++|+..... .+. ....+.++.+|+. +.+.+.++++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~~---~~~~~~~~~~Dl~~~~~~~~~~~~------- 67 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DLV---NHPRMHFFEGDITINKEWIEYHVK------- 67 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----Hhc---cCCCeEEEeCCCCCCHHHHHHHHc-------
Confidence 46999999999999999999986 699999998654322 111 1125888899998 6665544432
Q ss_pred CccEEEEcccCCC
Q 030706 159 YVDIWVFMSDLHS 171 (173)
Q Consensus 159 ~id~lVn~AG~~~ 171 (173)
++|+|||+|+...
T Consensus 68 ~~d~ViH~aa~~~ 80 (347)
T PRK11908 68 KCDVILPLVAIAT 80 (347)
T ss_pred CCCEEEECcccCC
Confidence 5899999998643
No 259
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.79 E-value=1.4e-07 Score=70.42 Aligned_cols=83 Identities=23% Similarity=0.278 Sum_probs=64.9
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
.+++++++|+||+|++|+.+++.|++.|++|++++|+.++.++..+.+....+ .....+|+.+.+++.+.++
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~----- 96 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG---EGVGAVETSDDAARAAAIK----- 96 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC---CcEEEeeCCCHHHHHHHHh-----
Confidence 36789999999999999999999999999999999998887777766654332 2344568888887766653
Q ss_pred cCCccEEEEcccC
Q 030706 157 LKYVDIWVFMSDL 169 (173)
Q Consensus 157 ~g~id~lVn~AG~ 169 (173)
..|+||++...
T Consensus 97 --~~diVi~at~~ 107 (194)
T cd01078 97 --GADVVFAAGAA 107 (194)
T ss_pred --cCCEEEECCCC
Confidence 57888886543
No 260
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.79 E-value=2.2e-08 Score=79.04 Aligned_cols=76 Identities=18% Similarity=0.271 Sum_probs=58.2
Q ss_pred EEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 84 LITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 84 lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
|||||+|.||.+++++|+++| ++|.++++...... ...+... + ...++.+|++|.++++++++ +.|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~-~--~~~~~~~Di~d~~~l~~a~~-------g~d 68 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKS-G--VKEYIQGDITDPESLEEALE-------GVD 68 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhcc-c--ceeEEEeccccHHHHHHHhc-------CCc
Confidence 699999999999999999999 78988887654321 1111111 1 23388999999999988875 579
Q ss_pred EEEEcccCCC
Q 030706 162 IWVFMSDLHS 171 (173)
Q Consensus 162 ~lVn~AG~~~ 171 (173)
+|||.|+...
T Consensus 69 ~V~H~Aa~~~ 78 (280)
T PF01073_consen 69 VVFHTAAPVP 78 (280)
T ss_pred eEEEeCcccc
Confidence 9999998754
No 261
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.76 E-value=4.9e-08 Score=85.47 Aligned_cols=80 Identities=19% Similarity=0.208 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHH-HHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNE-VADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~-v~~~~~~~~~ 155 (173)
..+++++||||+|.||.+++++|+++ |++|++++|....... +. ...++.++.+|++|.+. +++++
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~---~~~~~~~~~gDl~d~~~~l~~~l----- 380 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FL---GHPRFHFVEGDISIHSEWIEYHI----- 380 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hc---CCCceEEEeccccCcHHHHHHHh-----
Confidence 45788999999999999999999986 7999999987643211 11 11257888999998654 33333
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
..+|+|||+||...
T Consensus 381 --~~~D~ViHlAa~~~ 394 (660)
T PRK08125 381 --KKCDVVLPLVAIAT 394 (660)
T ss_pred --cCCCEEEECccccC
Confidence 25899999998754
No 262
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.76 E-value=5.4e-08 Score=79.98 Aligned_cols=79 Identities=25% Similarity=0.294 Sum_probs=60.5
Q ss_pred CCCCCEEEEEcC---------------Cch-HHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeC
Q 030706 77 MLPPYNVLITGS---------------TKG-IGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV 140 (173)
Q Consensus 77 ~~~~k~~lItGa---------------~~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv 140 (173)
.+.||+++|||| ++| +|.++++.|..+|++|+++++..... .+. .+ ..+|+
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~~~-~~--~~~~v 248 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------TPP-GV--KSIKV 248 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------CCC-Cc--EEEEe
Confidence 378999999999 556 99999999999999999988654321 111 12 45799
Q ss_pred CCHHHH-HHHHHHHHHhcCCccEEEEcccCCC
Q 030706 141 SEGNEV-ADLVAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 141 ~~~~~v-~~~~~~~~~~~g~id~lVn~AG~~~ 171 (173)
++.+++ ++++++ .++.+|++|+|||+..
T Consensus 249 ~~~~~~~~~~~~~---~~~~~D~~i~~Aavsd 277 (390)
T TIGR00521 249 STAEEMLEAALNE---LAKDFDIFISAAAVAD 277 (390)
T ss_pred ccHHHHHHHHHHh---hcccCCEEEEcccccc
Confidence 998888 556544 3478999999999863
No 263
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.76 E-value=3.6e-08 Score=78.22 Aligned_cols=76 Identities=13% Similarity=0.131 Sum_probs=52.2
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH--hcCCc
Q 030706 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK--NLKYV 160 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g~i 160 (173)
++||||+|.||.+++++|++.|++++++.++....... . .+..+|+.|..+.+.+++.+.+ .++++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 69 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V-----------NLVDLDIADYMDKEDFLAQIMAGDDFGDI 69 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H-----------hhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence 79999999999999999999998766655543321110 0 1124577776666666655542 34679
Q ss_pred cEEEEcccCC
Q 030706 161 DIWVFMSDLH 170 (173)
Q Consensus 161 d~lVn~AG~~ 170 (173)
|+|||+||..
T Consensus 70 d~Vih~A~~~ 79 (308)
T PRK11150 70 EAIFHEGACS 79 (308)
T ss_pred cEEEECceec
Confidence 9999999854
No 264
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.75 E-value=1.7e-09 Score=81.43 Aligned_cols=92 Identities=17% Similarity=0.226 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
..+|++|+||+++|||..++..+..++-......++....+ .+.+.-.++ ........|+++..-++++++..++++
T Consensus 4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~ 80 (253)
T KOG1204|consen 4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKG 80 (253)
T ss_pred ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcC
Confidence 35789999999999999988888877744333332221111 122222223 234556678999999999999999999
Q ss_pred CCccEEEEcccCCCC
Q 030706 158 KYVDIWVFMSDLHSS 172 (173)
Q Consensus 158 g~id~lVn~AG~~~~ 172 (173)
|..|++|||||..++
T Consensus 81 gkr~iiI~NAG~lgd 95 (253)
T KOG1204|consen 81 GKRDIIIHNAGSLGD 95 (253)
T ss_pred CceeEEEecCCCccc
Confidence 999999999998875
No 265
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.74 E-value=9.3e-08 Score=76.91 Aligned_cols=86 Identities=26% Similarity=0.226 Sum_probs=57.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhH---HHHHHHHHHHh------CCceEEEEEeeCCCHHH-H-HH
Q 030706 82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERV---DSAVQSLREEF------GEQHVWGTKCDVSEGNE-V-AD 148 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~---~~~~~~l~~~~------~~~~~~~~~~Dv~~~~~-v-~~ 148 (173)
+++||||+|+||.++++.|+++| ++|+++.|+.+.. +...+.+.... ...++.++.+|++++.. + ..
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 47999999999999999999998 7899999976422 12222222111 00268889999986531 0 11
Q ss_pred HHHHHHHhcCCccEEEEcccCC
Q 030706 149 LVAFAQKNLKYVDIWVFMSDLH 170 (173)
Q Consensus 149 ~~~~~~~~~g~id~lVn~AG~~ 170 (173)
.+.++ ...+|+||||||..
T Consensus 81 ~~~~~---~~~~d~vih~a~~~ 99 (367)
T TIGR01746 81 EWERL---AENVDTIVHNGALV 99 (367)
T ss_pred HHHHH---HhhCCEEEeCCcEe
Confidence 11222 14699999999864
No 266
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.74 E-value=4.4e-08 Score=76.71 Aligned_cols=82 Identities=17% Similarity=0.184 Sum_probs=62.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecCh--hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSA--ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+.+|||||+|+||.++++.+..+. .+|+.+|.-. ...+. +.......++.|++.||+|.+.+.+++++.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~----l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~--- 73 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLEN----LADVEDSPRYRFVQGDICDRELVDRLFKEY--- 73 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHH----HHhhhcCCCceEEeccccCHHHHHHHHHhc---
Confidence 468999999999999999999876 4577777522 11222 222223357999999999999999988764
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
.+|++||-|+-++
T Consensus 74 --~~D~VvhfAAESH 86 (340)
T COG1088 74 --QPDAVVHFAAESH 86 (340)
T ss_pred --CCCeEEEechhcc
Confidence 7999999987553
No 267
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.73 E-value=4e-08 Score=77.00 Aligned_cols=60 Identities=22% Similarity=0.319 Sum_probs=52.7
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI 162 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 162 (173)
++||||+|+||.+++++|.+.|++|++++|. .+|+.+.++++++++.. .+|+
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d~ 53 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPDA 53 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCCE
Confidence 7999999999999999999999999998874 36999999988887653 6899
Q ss_pred EEEcccCC
Q 030706 163 WVFMSDLH 170 (173)
Q Consensus 163 lVn~AG~~ 170 (173)
|||+||..
T Consensus 54 vi~~a~~~ 61 (287)
T TIGR01214 54 VVNTAAYT 61 (287)
T ss_pred EEECCccc
Confidence 99999864
No 268
>PRK05865 hypothetical protein; Provisional
Probab=98.68 E-value=1.4e-07 Score=84.13 Aligned_cols=71 Identities=15% Similarity=0.213 Sum_probs=58.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
+++||||+|+||.++++.|+++|++|++++|+.... + . .++.++.+|++|.+++.++++ .+|
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~----~-~~v~~v~gDL~D~~~l~~al~-------~vD 63 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W----P-SSADFIAADIRDATAVESAMT-------GAD 63 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c----c-cCceEEEeeCCCHHHHHHHHh-------CCC
Confidence 589999999999999999999999999999874321 1 1 147788999999998887764 489
Q ss_pred EEEEcccCC
Q 030706 162 IWVFMSDLH 170 (173)
Q Consensus 162 ~lVn~AG~~ 170 (173)
+|||+|+..
T Consensus 64 ~VVHlAa~~ 72 (854)
T PRK05865 64 VVAHCAWVR 72 (854)
T ss_pred EEEECCCcc
Confidence 999999864
No 269
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.66 E-value=7e-08 Score=76.23 Aligned_cols=75 Identities=24% Similarity=0.268 Sum_probs=58.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
.+||||++|.||.+++++|.++|++|+.++|......... ..+.++.+|+++.+.+.++++.. . |
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~-----~-d 66 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGV-----P-D 66 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcC-----C-C
Confidence 3899999999999999999999999999999765432221 14678889999885555544321 1 9
Q ss_pred EEEEcccCCC
Q 030706 162 IWVFMSDLHS 171 (173)
Q Consensus 162 ~lVn~AG~~~ 171 (173)
.+||+|+...
T Consensus 67 ~vih~aa~~~ 76 (314)
T COG0451 67 AVIHLAAQSS 76 (314)
T ss_pred EEEEccccCc
Confidence 9999999865
No 270
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.64 E-value=8.8e-08 Score=75.77 Aligned_cols=62 Identities=31% Similarity=0.402 Sum_probs=48.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
++||||++|.||.++.+.|.+.|+.|+.++|. .+|++|.+.+.+++++. ++|
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~pd 53 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KPD 53 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------S
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CCC
Confidence 68999999999999999999999999988775 57999999999998876 699
Q ss_pred EEEEcccCCC
Q 030706 162 IWVFMSDLHS 171 (173)
Q Consensus 162 ~lVn~AG~~~ 171 (173)
+|||+||+..
T Consensus 54 ~Vin~aa~~~ 63 (286)
T PF04321_consen 54 VVINCAAYTN 63 (286)
T ss_dssp EEEE------
T ss_pred eEeccceeec
Confidence 9999999863
No 271
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.61 E-value=2.8e-07 Score=77.20 Aligned_cols=79 Identities=20% Similarity=0.205 Sum_probs=56.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
.+++++|||||+|.||..++++|+++|++|+++++......+. +.......++.++..|+.+.. +
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~~~~~~~~~~i~~D~~~~~-----l------- 181 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMHHFSNPNFELIRHDVVEPI-----L------- 181 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhhhccCCceEEEECCccChh-----h-------
Confidence 3668999999999999999999999999999998753221111 111112235777788886652 1
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
..+|+|||+|+...
T Consensus 182 ~~~D~ViHlAa~~~ 195 (442)
T PLN02206 182 LEVDQIYHLACPAS 195 (442)
T ss_pred cCCCEEEEeeeecc
Confidence 25899999998653
No 272
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.61 E-value=2e-07 Score=73.90 Aligned_cols=76 Identities=12% Similarity=0.130 Sum_probs=54.5
Q ss_pred EEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
+|||||+|.||.++++.|.+.|+ .|+++++..... . ..++ . ...+..|+.+.+.++.+.+. .++.+|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~----~---~~~~~~d~~~~~~~~~~~~~---~~~~~D 68 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNL----A---DLVIADYIDKEDFLDRLEKG---AFGKIE 68 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhh----h---heeeeccCcchhHHHHHHhh---ccCCCC
Confidence 58999999999999999999997 788887754321 1 1111 1 12356788887776665543 346899
Q ss_pred EEEEcccCC
Q 030706 162 IWVFMSDLH 170 (173)
Q Consensus 162 ~lVn~AG~~ 170 (173)
+|||+||..
T Consensus 69 ~vvh~A~~~ 77 (314)
T TIGR02197 69 AIFHQGACS 77 (314)
T ss_pred EEEECcccc
Confidence 999999864
No 273
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.59 E-value=8.3e-07 Score=74.21 Aligned_cols=78 Identities=22% Similarity=0.252 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
..++++||||+|.||..++++|+++|++|+++++......+....+ ....++.++..|+.+.. + .
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~-----~-------~ 183 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL---FGNPRFELIRHDVVEPI-----L-------L 183 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh---ccCCceEEEECcccccc-----c-------c
Confidence 4568999999999999999999999999999998532211111111 12225777788886542 1 2
Q ss_pred CccEEEEcccCCC
Q 030706 159 YVDIWVFMSDLHS 171 (173)
Q Consensus 159 ~id~lVn~AG~~~ 171 (173)
++|+|||+|+...
T Consensus 184 ~~D~ViHlAa~~~ 196 (436)
T PLN02166 184 EVDQIYHLACPAS 196 (436)
T ss_pred CCCEEEECceecc
Confidence 5899999998643
No 274
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.58 E-value=4.1e-07 Score=79.32 Aligned_cols=83 Identities=20% Similarity=0.214 Sum_probs=57.4
Q ss_pred EEEEEcCCchHHHHHHHHHH--HcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHH--HHHHHHHHHhc
Q 030706 82 NVLITGSTKGIGYALAKEFL--KAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEV--ADLVAFAQKNL 157 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v--~~~~~~~~~~~ 157 (173)
++|||||+|.||.++++.|+ ..|++|++++|+... .. ...+....+..++.++.+|++|++.. ...++++
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l---- 75 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SR-LEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL---- 75 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HH-HHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence 69999999999999999999 478999999996432 11 12222222223688899999985310 1122222
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
.++|+|||+||..
T Consensus 76 ~~~D~Vih~Aa~~ 88 (657)
T PRK07201 76 GDIDHVVHLAAIY 88 (657)
T ss_pred cCCCEEEECceee
Confidence 4799999999864
No 275
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.57 E-value=9.6e-08 Score=75.04 Aligned_cols=75 Identities=15% Similarity=0.153 Sum_probs=59.2
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC-cc
Q 030706 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY-VD 161 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~-id 161 (173)
++||||+|.||..++++|.+.|++|.++.|+++.... . .+..+.+|+.|++++..+++.. +.+.. +|
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---------~--~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d 69 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---------P--NEKHVKFDWLDEDTWDNPFSSD-DGMEPEIS 69 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---------C--CCccccccCCCHHHHHHHHhcc-cCcCCcee
Confidence 7999999999999999999999999999998764310 1 2455678999999998888653 33344 89
Q ss_pred EEEEcccC
Q 030706 162 IWVFMSDL 169 (173)
Q Consensus 162 ~lVn~AG~ 169 (173)
.++++++.
T Consensus 70 ~v~~~~~~ 77 (285)
T TIGR03649 70 AVYLVAPP 77 (285)
T ss_pred EEEEeCCC
Confidence 99888764
No 276
>PLN02996 fatty acyl-CoA reductase
Probab=98.56 E-value=5.9e-07 Score=76.17 Aligned_cols=87 Identities=20% Similarity=0.291 Sum_probs=59.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEecChhh---HHHHHHHH---------HHHhC-------CceEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAER---VDSAVQSL---------REEFG-------EQHVWG 135 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G---~~V~~~~r~~~~---~~~~~~~l---------~~~~~-------~~~~~~ 135 (173)
+.+|+++||||+|.||..+++.|++.+ .+|+++.|.... .+....++ ....+ ..++.+
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 789999999999999999999999864 478888886431 11111111 11111 136899
Q ss_pred EEeeCCC-------HHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706 136 TKCDVSE-------GNEVADLVAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 136 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lVn~AG~~~ 171 (173)
+..|+++ .+.++.+++ .+|+|||+|+...
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~ 124 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTN 124 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccC
Confidence 9999984 333444432 5899999998753
No 277
>PLN02778 3,5-epimerase/4-reductase
Probab=98.52 E-value=8.1e-07 Score=70.63 Aligned_cols=60 Identities=17% Similarity=0.062 Sum_probs=45.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
+++|||||+|.||..+++.|.++|++|+... .|+.|.+.+...++.. ++
T Consensus 10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~~-----~~ 58 (298)
T PLN02778 10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDAV-----KP 58 (298)
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHhc-----CC
Confidence 5799999999999999999999999886421 2344555555544432 68
Q ss_pred cEEEEcccCCC
Q 030706 161 DIWVFMSDLHS 171 (173)
Q Consensus 161 d~lVn~AG~~~ 171 (173)
|+|||+||...
T Consensus 59 D~ViH~Aa~~~ 69 (298)
T PLN02778 59 THVFNAAGVTG 69 (298)
T ss_pred CEEEECCcccC
Confidence 99999999764
No 278
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.50 E-value=1.2e-06 Score=75.69 Aligned_cols=87 Identities=20% Similarity=0.286 Sum_probs=59.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEecChhh--H-HHHHHHH---------HHHhC-------CceEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAER--V-DSAVQSL---------REEFG-------EQHVWG 135 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G---~~V~~~~r~~~~--~-~~~~~~l---------~~~~~-------~~~~~~ 135 (173)
+.+|+++||||+|.||..++++|++.+ .+|+++.|.... . +....++ .+..+ ..++.+
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 589999999999999999999999865 378998885422 1 1221121 11112 236889
Q ss_pred EEeeCCCHH------HHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706 136 TKCDVSEGN------EVADLVAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 136 ~~~Dv~~~~------~v~~~~~~~~~~~g~id~lVn~AG~~~ 171 (173)
+..|++++. ..+.+. ..+|+|||+|+...
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~-------~~vDiVIH~AA~v~ 231 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIA-------KEVDVIINSAANTT 231 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHH-------hcCCEEEECccccc
Confidence 999999872 333222 15899999998753
No 279
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.49 E-value=4.1e-07 Score=71.35 Aligned_cols=60 Identities=20% Similarity=0.340 Sum_probs=53.6
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI 162 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 162 (173)
+||||++|-+|.++++.|. .+..|+.+++.. +|++|.+.+.+++.+. ++|+
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~PDv 53 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RPDV 53 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CCCE
Confidence 8999999999999999999 668999887742 7999999999999887 8999
Q ss_pred EEEcccCCC
Q 030706 163 WVFMSDLHS 171 (173)
Q Consensus 163 lVn~AG~~~ 171 (173)
|||+|++..
T Consensus 54 VIn~AAyt~ 62 (281)
T COG1091 54 VINAAAYTA 62 (281)
T ss_pred EEECccccc
Confidence 999999763
No 280
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.49 E-value=1.8e-07 Score=73.84 Aligned_cols=60 Identities=12% Similarity=0.185 Sum_probs=49.5
Q ss_pred EEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccEE
Q 030706 84 LITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIW 163 (173)
Q Consensus 84 lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 163 (173)
|||||+|.||..+++.|.+.|+.|+++.+. ..+|++|.++++++++.. ++|+|
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~-----~~d~V 53 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKE-----KPTYV 53 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence 699999999999999999999887765421 147999999888887653 68999
Q ss_pred EEcccCC
Q 030706 164 VFMSDLH 170 (173)
Q Consensus 164 Vn~AG~~ 170 (173)
||+|+..
T Consensus 54 ih~A~~~ 60 (306)
T PLN02725 54 ILAAAKV 60 (306)
T ss_pred EEeeeee
Confidence 9999864
No 281
>PRK12320 hypothetical protein; Provisional
Probab=98.46 E-value=9.5e-07 Score=77.39 Aligned_cols=70 Identities=14% Similarity=0.238 Sum_probs=54.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
+++||||+|.||..+++.|.++|++|+++++..... ....+.++.+|++|.. +.+++ .++|
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-----------~~~~ve~v~~Dl~d~~-l~~al-------~~~D 62 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-----------LDPRVDYVCASLRNPV-LQELA-------GEAD 62 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-----------ccCCceEEEccCCCHH-HHHHh-------cCCC
Confidence 599999999999999999999999999999864321 0124778899999873 33332 2589
Q ss_pred EEEEcccCC
Q 030706 162 IWVFMSDLH 170 (173)
Q Consensus 162 ~lVn~AG~~ 170 (173)
+|||+|++.
T Consensus 63 ~VIHLAa~~ 71 (699)
T PRK12320 63 AVIHLAPVD 71 (699)
T ss_pred EEEEcCccC
Confidence 999999864
No 282
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.46 E-value=1.4e-06 Score=72.94 Aligned_cols=77 Identities=27% Similarity=0.298 Sum_probs=57.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+.+|+++|+|+++ +|.++++.|++.|++|++++++. +..++...++... .+.++..|..+ +.
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~------------~~ 65 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPE------------EF 65 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcch------------hH
Confidence 6789999999877 99999999999999999999875 3344444444322 24566777765 12
Q ss_pred cCCccEEEEcccCCC
Q 030706 157 LKYVDIWVFMSDLHS 171 (173)
Q Consensus 157 ~g~id~lVn~AG~~~ 171 (173)
.+.+|+||+++|+..
T Consensus 66 ~~~~d~vv~~~g~~~ 80 (450)
T PRK14106 66 LEGVDLVVVSPGVPL 80 (450)
T ss_pred hhcCCEEEECCCCCC
Confidence 357999999999854
No 283
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.43 E-value=1.5e-06 Score=71.46 Aligned_cols=75 Identities=21% Similarity=0.366 Sum_probs=57.4
Q ss_pred EEEEcCCchHHHHHHHHHHHcC-C-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 83 VLITGSTKGIGYALAKEFLKAG-D-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G-~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
|+|.|+ |.+|..+++.|++.+ . +|++.+|+.+++++..+++ ...++.++++|+.|.++++++++ ..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~-------~~ 68 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR-------GC 68 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT-------TS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh-------cC
Confidence 689999 999999999999987 4 8999999998877776654 22369999999999999888764 45
Q ss_pred cEEEEcccC
Q 030706 161 DIWVFMSDL 169 (173)
Q Consensus 161 d~lVn~AG~ 169 (173)
|+|||++|-
T Consensus 69 dvVin~~gp 77 (386)
T PF03435_consen 69 DVVINCAGP 77 (386)
T ss_dssp SEEEE-SSG
T ss_pred CEEEECCcc
Confidence 999999985
No 284
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.43 E-value=1.3e-06 Score=71.50 Aligned_cols=76 Identities=21% Similarity=0.390 Sum_probs=62.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
+++||.|+ |++|+.+|..|+++| .+|++.+|+.++..+..... .. ++...++|+.|.+.+.+++++
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~----~~-~v~~~~vD~~d~~al~~li~~------- 68 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI----GG-KVEALQVDAADVDALVALIKD------- 68 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc----cc-cceeEEecccChHHHHHHHhc-------
Confidence 56889888 999999999999999 89999999987765554332 22 688999999999988888764
Q ss_pred ccEEEEcccC
Q 030706 160 VDIWVFMSDL 169 (173)
Q Consensus 160 id~lVn~AG~ 169 (173)
.|+|||++..
T Consensus 69 ~d~VIn~~p~ 78 (389)
T COG1748 69 FDLVINAAPP 78 (389)
T ss_pred CCEEEEeCCc
Confidence 3999998764
No 285
>PRK09620 hypothetical protein; Provisional
Probab=98.42 E-value=6.9e-07 Score=68.53 Aligned_cols=82 Identities=17% Similarity=0.157 Sum_probs=50.6
Q ss_pred CCCCEEEEEcCC----------------chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC
Q 030706 78 LPPYNVLITGST----------------KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141 (173)
Q Consensus 78 ~~~k~~lItGa~----------------~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~ 141 (173)
+.||.+|||+|. |.||.++|++|+++|++|++++........ .+ .....+..+..|
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~---~~~~~~~~V~s~-- 72 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI---NNQLELHPFEGI-- 72 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc---CCceeEEEEecH--
Confidence 468999999886 999999999999999999988763221100 00 001123333332
Q ss_pred CHHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706 142 EGNEVADLVAFAQKNLKYVDIWVFMSDLH 170 (173)
Q Consensus 142 ~~~~v~~~~~~~~~~~g~id~lVn~AG~~ 170 (173)
.++...+.++.+. ..+|++||+|++.
T Consensus 73 --~d~~~~l~~~~~~-~~~D~VIH~AAvs 98 (229)
T PRK09620 73 --IDLQDKMKSIITH-EKVDAVIMAAAGS 98 (229)
T ss_pred --HHHHHHHHHHhcc-cCCCEEEECcccc
Confidence 2222233333221 2689999999984
No 286
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.41 E-value=4e-07 Score=69.96 Aligned_cols=60 Identities=17% Similarity=0.117 Sum_probs=48.7
Q ss_pred HHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706 96 LAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 96 ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG~~~ 171 (173)
+++.|+++|++|++++|+.+..+ + ..++++|++|.++++++++++. +++|+||||||+..
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~--------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~ 60 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----L--------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG 60 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----h--------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC
Confidence 47889999999999999875431 1 2356899999999999988763 68999999999753
No 287
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.40 E-value=1.6e-06 Score=67.13 Aligned_cols=84 Identities=18% Similarity=0.235 Sum_probs=46.7
Q ss_pred EEcCCchHHHHHHHHHHHcCC--EEEEEecChhh---HHHHHHHHHH-----Hh---CCceEEEEEeeCCCHHH-H-HHH
Q 030706 85 ITGSTKGIGYALAKEFLKAGD--NVIICSRSAER---VDSAVQSLRE-----EF---GEQHVWGTKCDVSEGNE-V-ADL 149 (173)
Q Consensus 85 ItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~---~~~~~~~l~~-----~~---~~~~~~~~~~Dv~~~~~-v-~~~ 149 (173)
|||++|.||..+.++|++.+. +|+++.|.... .+...+.+.. .. ...++.++..|++++.- + +..
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999885 99999997532 2222121111 11 12479999999998641 1 111
Q ss_pred HHHHHHhcCCccEEEEcccCCC
Q 030706 150 VAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 150 ~~~~~~~~g~id~lVn~AG~~~ 171 (173)
++++.+ .+|+|||||+...
T Consensus 81 ~~~L~~---~v~~IiH~Aa~v~ 99 (249)
T PF07993_consen 81 YQELAE---EVDVIIHCAASVN 99 (249)
T ss_dssp HHHHHH---H--EEEE--SS-S
T ss_pred hhcccc---ccceeeecchhhh
Confidence 222222 5899999998653
No 288
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.39 E-value=2.8e-06 Score=64.87 Aligned_cols=75 Identities=21% Similarity=0.259 Sum_probs=57.6
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI 162 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 162 (173)
++|+||+|.+|+.+++.|++.|++|.++.|+... +...+++.. + +..+.+|+.|.+++.++++ ++|.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~-g---~~vv~~d~~~~~~l~~al~-------g~d~ 67 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL-G---AEVVEADYDDPESLVAALK-------GVDA 67 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT-T---TEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc-c---ceEeecccCCHHHHHHHHc-------CCce
Confidence 6899999999999999999999999999998732 233444433 2 4566999999998887774 7899
Q ss_pred EEEcccCC
Q 030706 163 WVFMSDLH 170 (173)
Q Consensus 163 lVn~AG~~ 170 (173)
||.+.+..
T Consensus 68 v~~~~~~~ 75 (233)
T PF05368_consen 68 VFSVTPPS 75 (233)
T ss_dssp EEEESSCS
T ss_pred EEeecCcc
Confidence 99887754
No 289
>PLN00016 RNA-binding protein; Provisional
Probab=98.34 E-value=1.4e-06 Score=71.33 Aligned_cols=82 Identities=28% Similarity=0.241 Sum_probs=55.2
Q ss_pred CCCEEEEE----cCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----HHHHHHhCCceEEEEEeeCCCHHHHHHHH
Q 030706 79 PPYNVLIT----GSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV----QSLREEFGEQHVWGTKCDVSEGNEVADLV 150 (173)
Q Consensus 79 ~~k~~lIt----Ga~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~ 150 (173)
..++++|| ||+|.||..+++.|+++|++|++++|+........ ..+..... ..+.++.+|+.| ++.++
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~v~~v~~D~~d---~~~~~ 126 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS-AGVKTVWGDPAD---VKSKV 126 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh-cCceEEEecHHH---HHhhh
Confidence 34789999 99999999999999999999999999865422110 00111101 136777888765 33332
Q ss_pred HHHHHhcCCccEEEEcccC
Q 030706 151 AFAQKNLKYVDIWVFMSDL 169 (173)
Q Consensus 151 ~~~~~~~g~id~lVn~AG~ 169 (173)
. ...+|+||+++|.
T Consensus 127 ~-----~~~~d~Vi~~~~~ 140 (378)
T PLN00016 127 A-----GAGFDVVYDNNGK 140 (378)
T ss_pred c-----cCCccEEEeCCCC
Confidence 1 1368999998763
No 290
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.32 E-value=5.3e-06 Score=58.48 Aligned_cols=77 Identities=19% Similarity=0.300 Sum_probs=56.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
.+++++++|.|+ ||.|++++..|.+.|++ |+++.|+.++++++.+.+ +...+.++ ++.+.. ...
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~----~~~~~~~~--~~~~~~---~~~----- 73 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF----GGVNIEAI--PLEDLE---EAL----- 73 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH----TGCSEEEE--EGGGHC---HHH-----
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc----Ccccccee--eHHHHH---HHH-----
Confidence 478999999997 89999999999999975 999999998888777766 22134443 333322 222
Q ss_pred hcCCccEEEEcccCC
Q 030706 156 NLKYVDIWVFMSDLH 170 (173)
Q Consensus 156 ~~g~id~lVn~AG~~ 170 (173)
...|++||+.+..
T Consensus 74 --~~~DivI~aT~~~ 86 (135)
T PF01488_consen 74 --QEADIVINATPSG 86 (135)
T ss_dssp --HTESEEEE-SSTT
T ss_pred --hhCCeEEEecCCC
Confidence 2689999997764
No 291
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.29 E-value=1.1e-06 Score=68.80 Aligned_cols=68 Identities=25% Similarity=0.189 Sum_probs=47.1
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccE
Q 030706 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDI 162 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 162 (173)
+|||||+|.||..+++.|++.|++|++++|+........ . .. ..|+.. +. ..+.+..+|+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~--~~--~~~~~~-~~-------~~~~~~~~D~ 60 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------W--EG--YKPWAP-LA-------ESEALEGADA 60 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------c--ee--eecccc-cc-------hhhhcCCCCE
Confidence 589999999999999999999999999999875432110 0 01 112221 11 1233457999
Q ss_pred EEEcccCC
Q 030706 163 WVFMSDLH 170 (173)
Q Consensus 163 lVn~AG~~ 170 (173)
|||+||..
T Consensus 61 Vvh~a~~~ 68 (292)
T TIGR01777 61 VINLAGEP 68 (292)
T ss_pred EEECCCCC
Confidence 99999864
No 292
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.29 E-value=5.3e-06 Score=63.66 Aligned_cols=76 Identities=20% Similarity=0.215 Sum_probs=49.6
Q ss_pred EEEEEcCC-chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 82 NVLITGST-KGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 82 ~~lItGa~-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
+=.||+.+ |+||+++++.|+++|++|+++++..... .... ..+.++.++ ..+++.+.+.+.++.+
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~~~-~~v~~i~v~-----s~~~m~~~l~~~~~~~ 82 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PEPH-PNLSIIEIE-----NVDDLLETLEPLVKDH 82 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CCCC-CCeEEEEEe-----cHHHHHHHHHHHhcCC
Confidence 55777755 5599999999999999999998754210 0001 135555432 2233334444445679
Q ss_pred cEEEEcccCCC
Q 030706 161 DIWVFMSDLHS 171 (173)
Q Consensus 161 d~lVn~AG~~~ 171 (173)
|+||||||+..
T Consensus 83 DivIh~AAvsd 93 (229)
T PRK06732 83 DVLIHSMAVSD 93 (229)
T ss_pred CEEEeCCccCC
Confidence 99999999864
No 293
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.23 E-value=7.5e-06 Score=63.42 Aligned_cols=72 Identities=25% Similarity=0.276 Sum_probs=59.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
.++||||+|.+|.+++++|.++|++|.+..|+++...... ..+.+...|+.+++.+...++ ++|
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~~ 65 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GVD 65 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------ccc
Confidence 5899999999999999999999999999999987765543 147788889999988877664 567
Q ss_pred EEEEcccC
Q 030706 162 IWVFMSDL 169 (173)
Q Consensus 162 ~lVn~AG~ 169 (173)
.+++..+.
T Consensus 66 ~~~~i~~~ 73 (275)
T COG0702 66 GVLLISGL 73 (275)
T ss_pred EEEEEecc
Confidence 77666654
No 294
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=98.19 E-value=6.3e-06 Score=66.91 Aligned_cols=82 Identities=15% Similarity=0.160 Sum_probs=58.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
.++.+++||||+|.+|++++..|.+.+ .+|.+.|...... ....+.... ...++.++++|+.|..++.+.++
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~-~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~---- 75 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQS-NLPAELTGF-RSGRVTVILGDLLDANSISNAFQ---- 75 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcccc-ccchhhhcc-cCCceeEEecchhhhhhhhhhcc----
Confidence 456799999999999999999999998 7899988765311 111111111 12368899999999888877764
Q ss_pred hcCCccEEEEcccC
Q 030706 156 NLKYVDIWVFMSDL 169 (173)
Q Consensus 156 ~~g~id~lVn~AG~ 169 (173)
+. .+||+|+.
T Consensus 76 ---~~-~Vvh~aa~ 85 (361)
T KOG1430|consen 76 ---GA-VVVHCAAS 85 (361)
T ss_pred ---Cc-eEEEeccc
Confidence 44 56666654
No 295
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.17 E-value=2.2e-06 Score=66.70 Aligned_cols=35 Identities=40% Similarity=0.558 Sum_probs=32.4
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~ 117 (173)
++||||+|.||++++..|.+.|+.|+++.|++...
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~ 35 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKA 35 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcch
Confidence 58999999999999999999999999999987653
No 296
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.16 E-value=9.2e-06 Score=71.31 Aligned_cols=61 Identities=18% Similarity=0.057 Sum_probs=48.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
.+++|||||+|.||.++++.|.++|++|.. ...|++|.+.+.+++++. +
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~--------------------------~~~~l~d~~~v~~~i~~~-----~ 428 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY--------------------------GKGRLEDRSSLLADIRNV-----K 428 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEe--------------------------eccccccHHHHHHHHHhh-----C
Confidence 347999999999999999999999987621 123677888877776654 6
Q ss_pred ccEEEEcccCCC
Q 030706 160 VDIWVFMSDLHS 171 (173)
Q Consensus 160 id~lVn~AG~~~ 171 (173)
+|+|||+|+...
T Consensus 429 pd~Vih~Aa~~~ 440 (668)
T PLN02260 429 PTHVFNAAGVTG 440 (668)
T ss_pred CCEEEECCcccC
Confidence 899999999763
No 297
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=98.15 E-value=1.1e-05 Score=64.87 Aligned_cols=82 Identities=13% Similarity=0.201 Sum_probs=68.8
Q ss_pred EEEEEcCCchHHHHHHHHHHH----cCCEEEEEecChhhHHHHHHHHHHHhCC--ceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 82 NVLITGSTKGIGYALAKEFLK----AGDNVIICSRSAERVDSAVQSLREEFGE--QHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~----~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
-++|-||+|.-|..+++++.. .|..+.+.+|+++++++..+.+.+..+. .+...+.+|++|++++.++..+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~--- 83 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ--- 83 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence 479999999999999999998 6789999999999999998888776532 1233778999999999998864
Q ss_pred hcCCccEEEEcccCC
Q 030706 156 NLKYVDIWVFMSDLH 170 (173)
Q Consensus 156 ~~g~id~lVn~AG~~ 170 (173)
-.+||||+|-.
T Consensus 84 ----~~vivN~vGPy 94 (423)
T KOG2733|consen 84 ----ARVIVNCVGPY 94 (423)
T ss_pred ----hEEEEeccccc
Confidence 57899999854
No 298
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.15 E-value=2.2e-05 Score=63.62 Aligned_cols=83 Identities=25% Similarity=0.309 Sum_probs=56.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChh--h-HHHHHHHHH-----HHhCCceEEEEEeeCCCH------HH
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAE--R-VDSAVQSLR-----EEFGEQHVWGTKCDVSEG------NE 145 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~--~-~~~~~~~l~-----~~~~~~~~~~~~~Dv~~~------~~ 145 (173)
+++++|||+|.||..+..+|+.+- ++|++..|-.+ . .+.+.+.+. +.....++..+..|++.+ ..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 479999999999999999888764 79999988443 1 222222222 112235899999999833 33
Q ss_pred HHHHHHHHHHhcCCccEEEEcccCC
Q 030706 146 VADLVAFAQKNLKYVDIWVFMSDLH 170 (173)
Q Consensus 146 v~~~~~~~~~~~g~id~lVn~AG~~ 170 (173)
++.+. +.+|.+||||+..
T Consensus 81 ~~~La-------~~vD~I~H~gA~V 98 (382)
T COG3320 81 WQELA-------ENVDLIIHNAALV 98 (382)
T ss_pred HHHHh-------hhcceEEecchhh
Confidence 33333 3689999999864
No 299
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.13 E-value=5.9e-06 Score=64.64 Aligned_cols=86 Identities=19% Similarity=0.151 Sum_probs=65.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHH--HhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLRE--EFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+|++||||-+|--|..+++.|++.|+.|..+.|.........-.|.. ...+.+++++.+|++|...+.++++++
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---- 77 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---- 77 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence 68999999999999999999999999999998864322111001111 112346889999999999999999987
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
++|-+.|-|+-.
T Consensus 78 -~PdEIYNLaAQS 89 (345)
T COG1089 78 -QPDEIYNLAAQS 89 (345)
T ss_pred -Cchhheeccccc
Confidence 788888877644
No 300
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=98.09 E-value=2.9e-05 Score=57.69 Aligned_cols=77 Identities=25% Similarity=0.289 Sum_probs=46.7
Q ss_pred CCCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC
Q 030706 78 LPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS 141 (173)
Q Consensus 78 ~~~k~~lItGa----------------~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~ 141 (173)
|.||.+|||+| +|-+|.++|+.+..+|++|+++..... ... +. .+..+ ++.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~---------p~-~~~~i--~v~ 67 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP---------PP-GVKVI--RVE 67 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------T-TEEEE--E-S
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc---------cc-cceEE--Eec
Confidence 46888888887 468999999999999999999887632 110 11 34443 455
Q ss_pred CHHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706 142 EGNEVADLVAFAQKNLKYVDIWVFMSDLH 170 (173)
Q Consensus 142 ~~~~v~~~~~~~~~~~g~id~lVn~AG~~ 170 (173)
+.+++.+.+. +.+..-|++|++|++.
T Consensus 68 sa~em~~~~~---~~~~~~Di~I~aAAVs 93 (185)
T PF04127_consen 68 SAEEMLEAVK---ELLPSADIIIMAAAVS 93 (185)
T ss_dssp SHHHHHHHHH---HHGGGGSEEEE-SB--
T ss_pred chhhhhhhhc---cccCcceeEEEecchh
Confidence 5555554444 4444559999999875
No 301
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.07 E-value=2.1e-05 Score=63.66 Aligned_cols=74 Identities=22% Similarity=0.338 Sum_probs=53.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHc-C-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKA-G-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQ 154 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 154 (173)
.+.+|+++||||+|.||..++++|+++ | .++++++|+.+.+.....++. ..|+. +++
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~-----------~~~i~---~l~------- 210 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG-----------GGKIL---SLE------- 210 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc-----------cccHH---hHH-------
Confidence 478999999999999999999999864 5 589999998776655544331 11222 122
Q ss_pred HhcCCccEEEEcccCCC
Q 030706 155 KNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 155 ~~~g~id~lVn~AG~~~ 171 (173)
+.+...|++|+.++...
T Consensus 211 ~~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 211 EALPEADIVVWVASMPK 227 (340)
T ss_pred HHHccCCEEEECCcCCc
Confidence 22346899999998743
No 302
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.04 E-value=1.2e-05 Score=67.17 Aligned_cols=79 Identities=27% Similarity=0.263 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+|+++|||+++ +|.++++.|++.|++|++.+++........+++... + +.++..+ +...+ .+
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~-g---~~~~~~~--~~~~~---~~------ 66 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE-G---IKVICGS--HPLEL---LD------ 66 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc-C---CEEEeCC--CCHHH---hc------
Confidence 5789999999976 999999999999999999998654433344445432 2 2222111 11111 11
Q ss_pred CCccEEEEcccCCCC
Q 030706 158 KYVDIWVFMSDLHSS 172 (173)
Q Consensus 158 g~id~lVn~AG~~~~ 172 (173)
..+|+||+++|+...
T Consensus 67 ~~~d~vV~s~gi~~~ 81 (447)
T PRK02472 67 EDFDLMVKNPGIPYT 81 (447)
T ss_pred CcCCEEEECCCCCCC
Confidence 148999999998654
No 303
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.03 E-value=2.3e-05 Score=61.33 Aligned_cols=65 Identities=22% Similarity=0.245 Sum_probs=46.5
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG 143 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~ 143 (173)
...+++.++||||+|+||.+++..|..+|+.|+++|.....-++....+ .+..++..+.-|+..+
T Consensus 23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~---~~~~~fel~~hdv~~p 87 (350)
T KOG1429|consen 23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHW---IGHPNFELIRHDVVEP 87 (350)
T ss_pred cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchh---ccCcceeEEEeechhH
Confidence 3356789999999999999999999999999999987543322222222 2333566667777654
No 304
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.98 E-value=6.8e-05 Score=53.54 Aligned_cols=75 Identities=23% Similarity=0.327 Sum_probs=53.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+++++++|+|+ |++|.++++.|.+.| .+|++++|+.+..++..+++... .+..+..+.+++
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---------- 78 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-------GIAIAYLDLEEL---------- 78 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-------ccceeecchhhc----------
Confidence 55788999997 899999999999996 78999999987776665554321 012333333322
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
....|+||++....
T Consensus 79 ~~~~Dvvi~~~~~~ 92 (155)
T cd01065 79 LAEADLIINTTPVG 92 (155)
T ss_pred cccCCEEEeCcCCC
Confidence 24789999987653
No 305
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.91 E-value=0.0001 Score=57.85 Aligned_cols=75 Identities=29% Similarity=0.413 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
..+|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++... + .+.....| +. ..
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~-~--~~~~~~~~-----~~---------~~ 176 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY-G--EIQAFSMD-----EL---------PL 176 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc-C--ceEEechh-----hh---------cc
Confidence 45789999998 69999999999999999999999988877776665432 1 12222111 10 12
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
...|+|||+.+..
T Consensus 177 ~~~DivInatp~g 189 (270)
T TIGR00507 177 HRVDLIINATSAG 189 (270)
T ss_pred cCccEEEECCCCC
Confidence 3689999998764
No 306
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=97.89 E-value=4.3e-05 Score=60.03 Aligned_cols=84 Identities=18% Similarity=0.172 Sum_probs=65.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
..+|-++-|-||+|.+|+.++.+|++.|..|++-.|..+.. ...++-.+.-.++.++..|+.|+++++++++.
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~---~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~---- 130 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD---PRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKH---- 130 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccc---hhheeecccccceeeeccCCCCHHHHHHHHHh----
Confidence 36788899999999999999999999999999999865432 12222222223699999999999999998863
Q ss_pred cCCccEEEEcccCC
Q 030706 157 LKYVDIWVFMSDLH 170 (173)
Q Consensus 157 ~g~id~lVn~AG~~ 170 (173)
-++|||--|--
T Consensus 131 ---sNVVINLIGrd 141 (391)
T KOG2865|consen 131 ---SNVVINLIGRD 141 (391)
T ss_pred ---CcEEEEeeccc
Confidence 57888877743
No 307
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.86 E-value=0.00012 Score=57.69 Aligned_cols=48 Identities=25% Similarity=0.387 Sum_probs=41.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLR 125 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~ 125 (173)
.+.+|+++|+|+ ||+|++++..|...| .+|++++|+.++.++..+++.
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~ 168 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG 168 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 367899999997 899999999999999 799999999888777666553
No 308
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=97.83 E-value=5.8e-05 Score=63.15 Aligned_cols=93 Identities=17% Similarity=0.201 Sum_probs=58.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEecChh--hHHH---------HHHHHHHHhCC--ceEEEEEeeCC
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG---DNVIICSRSAE--RVDS---------AVQSLREEFGE--QHVWGTKCDVS 141 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G---~~V~~~~r~~~--~~~~---------~~~~l~~~~~~--~~~~~~~~Dv~ 141 (173)
+.+|+++||||+|++|+-+.++|++.- .+++++-|... ..++ ..+.+.+..+. .++..+..|++
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 689999999999999999999999853 37888877431 1111 12222222222 36788888987
Q ss_pred CHHHHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706 142 EGNEVADLVAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 142 ~~~~v~~~~~~~~~~~g~id~lVn~AG~~~ 171 (173)
+++---.--+.- .-...+|++||+|+-..
T Consensus 90 ~~~LGis~~D~~-~l~~eV~ivih~AAtvr 118 (467)
T KOG1221|consen 90 EPDLGISESDLR-TLADEVNIVIHSAATVR 118 (467)
T ss_pred CcccCCChHHHH-HHHhcCCEEEEeeeeec
Confidence 654211111110 11237999999998643
No 309
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.79 E-value=0.00011 Score=63.12 Aligned_cols=47 Identities=28% Similarity=0.378 Sum_probs=40.2
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 124 (173)
.+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 367899999999 69999999999999999999999887776665543
No 310
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=97.79 E-value=0.00021 Score=67.42 Aligned_cols=88 Identities=19% Similarity=0.242 Sum_probs=57.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcC----CEEEEEecChhhHHHHHHHHHHH---hC------CceEEEEEeeCCCHHHH
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAG----DNVIICSRSAERVDSAVQSLREE---FG------EQHVWGTKCDVSEGNEV 146 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~---~~------~~~~~~~~~Dv~~~~~v 146 (173)
.++++|||++|.||..+++.|++.+ .+|+++.|....... .+.+... ++ ..++.++..|++++.--
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG-LERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH-HHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 5789999999999999999999887 789998887533221 1222110 10 12588899999754210
Q ss_pred --HHHHHHHHHhcCCccEEEEcccCCC
Q 030706 147 --ADLVAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 147 --~~~~~~~~~~~g~id~lVn~AG~~~ 171 (173)
...++++. ..+|++||||+...
T Consensus 1050 l~~~~~~~l~---~~~d~iiH~Aa~~~ 1073 (1389)
T TIGR03443 1050 LSDEKWSDLT---NEVDVIIHNGALVH 1073 (1389)
T ss_pred cCHHHHHHHH---hcCCEEEECCcEec
Confidence 11222222 36899999998643
No 311
>PRK06849 hypothetical protein; Provisional
Probab=97.77 E-value=0.00043 Score=57.01 Aligned_cols=83 Identities=16% Similarity=0.180 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
...|++||||++..+|+.+++.|.+.|++|++++.++.......... . ....+...-.+.+...+.+.++.++.
T Consensus 2 ~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-----d-~~~~~p~p~~d~~~~~~~L~~i~~~~ 75 (389)
T PRK06849 2 NTKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-----D-GFYTIPSPRWDPDAYIQALLSIVQRE 75 (389)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-----h-heEEeCCCCCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999999999998764432111111 1 22222112234444444444455554
Q ss_pred CCccEEEEcc
Q 030706 158 KYVDIWVFMS 167 (173)
Q Consensus 158 g~id~lVn~A 167 (173)
++|+||...
T Consensus 76 -~id~vIP~~ 84 (389)
T PRK06849 76 -NIDLLIPTC 84 (389)
T ss_pred -CCCEEEECC
Confidence 489998754
No 312
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.71 E-value=0.00012 Score=66.69 Aligned_cols=96 Identities=21% Similarity=0.300 Sum_probs=71.7
Q ss_pred CCCCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHH---HHHHHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706 73 KREPMLPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVD---SAVQSLREEFGEQHVWGTKCDVSEGNEVAD 148 (173)
Q Consensus 73 ~~~~~~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~ 148 (173)
.+..+-..|.|+|+||-||.|+.++.+|..+|+ .+++++|+.-+.. ..+..+... + .++..-..||+..+....
T Consensus 1761 ~rt~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~-G-VqV~vsT~nitt~~ga~~ 1838 (2376)
T KOG1202|consen 1761 PRTYCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR-G-VQVQVSTSNITTAEGARG 1838 (2376)
T ss_pred chhhcCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc-C-eEEEEecccchhhhhHHH
Confidence 345566789999999999999999999999997 5888888764322 234444443 2 246666678888888888
Q ss_pred HHHHHHHhcCCccEEEEcccCCC
Q 030706 149 LVAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 149 ~~~~~~~~~g~id~lVn~AG~~~ 171 (173)
++++. .++|.+-+++|-|.+..
T Consensus 1839 Li~~s-~kl~~vGGiFnLA~VLR 1860 (2376)
T KOG1202|consen 1839 LIEES-NKLGPVGGIFNLAAVLR 1860 (2376)
T ss_pred HHHHh-hhcccccchhhHHHHHH
Confidence 88775 45688999999887653
No 313
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.70 E-value=0.00047 Score=54.62 Aligned_cols=50 Identities=24% Similarity=0.337 Sum_probs=42.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEF 128 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~ 128 (173)
+.+|.++|.|+ ||.|++++..|+..|. +|++++|+.++.+...+.+....
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~ 175 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF 175 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence 56789999986 7899999999999996 89999999988888877775543
No 314
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.68 E-value=0.00023 Score=52.55 Aligned_cols=72 Identities=22% Similarity=0.185 Sum_probs=58.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
.+-|.|++|-.|..+.++..++|+.|+.+.|++.+.... ..+..++.||.|++++.+.+ -+.|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l-------~g~D 64 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDL-------AGHD 64 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhh-------cCCc
Confidence 477889999999999999999999999999998764321 14667889999998875544 2689
Q ss_pred EEEEcccCC
Q 030706 162 IWVFMSDLH 170 (173)
Q Consensus 162 ~lVn~AG~~ 170 (173)
+||..-|..
T Consensus 65 aVIsA~~~~ 73 (211)
T COG2910 65 AVISAFGAG 73 (211)
T ss_pred eEEEeccCC
Confidence 999877665
No 315
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=97.55 E-value=0.00073 Score=53.57 Aligned_cols=81 Identities=23% Similarity=0.296 Sum_probs=56.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
..++.++|+|+++++|.+++..+...|++|++++++.+..+.. .. .+. . ..+|..+.+..+.+.+... .
T Consensus 165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~-~~~-~---~~~~~~~~~~~~~~~~~~~--~ 233 (342)
T cd08266 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA----KE-LGA-D---YVIDYRKEDFVREVRELTG--K 233 (342)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-cCC-C---eEEecCChHHHHHHHHHhC--C
Confidence 3578999999999999999999999999999998887654332 11 121 1 1246666655555544332 1
Q ss_pred CCccEEEEcccC
Q 030706 158 KYVDIWVFMSDL 169 (173)
Q Consensus 158 g~id~lVn~AG~ 169 (173)
+++|++|+++|.
T Consensus 234 ~~~d~~i~~~g~ 245 (342)
T cd08266 234 RGVDVVVEHVGA 245 (342)
T ss_pred CCCcEEEECCcH
Confidence 369999999874
No 316
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=97.54 E-value=0.00067 Score=54.48 Aligned_cols=81 Identities=16% Similarity=0.142 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
-.|.+++|+|++|++|..++..+...|++|+.+.+++++.+...+.+ +...+ .|..+.+++.+.+.+.. .
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l----Ga~~v----i~~~~~~~~~~~i~~~~-~- 219 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL----GFDDA----FNYKEEPDLDAALKRYF-P- 219 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc----CCcee----EEcCCcccHHHHHHHhC-C-
Confidence 35789999999999999988877778999999888776544332212 22111 23332223333333322 1
Q ss_pred CCccEEEEccc
Q 030706 158 KYVDIWVFMSD 168 (173)
Q Consensus 158 g~id~lVn~AG 168 (173)
+++|+++++.|
T Consensus 220 ~gvd~v~d~~g 230 (338)
T cd08295 220 NGIDIYFDNVG 230 (338)
T ss_pred CCcEEEEECCC
Confidence 46899988876
No 317
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.53 E-value=0.0016 Score=52.84 Aligned_cols=81 Identities=28% Similarity=0.370 Sum_probs=56.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh---------------------hhHHHHHHHHHHHhCCceEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA---------------------ERVDSAVQSLREEFGEQHVWG 135 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~ 135 (173)
+.+++++|.|+ ||+|..+++.|+..|. ++.++|++. .+.+.+.+.+.+..+..++..
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~ 100 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP 100 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence 67788999986 7899999999999995 899998863 234444566666656556667
Q ss_pred EEeeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 136 TKCDVSEGNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 136 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
+..|++. +.+++++ ...|++|.+.
T Consensus 101 ~~~~~~~-~~~~~~~-------~~~DlVid~~ 124 (338)
T PRK12475 101 VVTDVTV-EELEELV-------KEVDLIIDAT 124 (338)
T ss_pred EeccCCH-HHHHHHh-------cCCCEEEEcC
Confidence 7667653 3333332 3567777664
No 318
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.44 E-value=0.0012 Score=52.37 Aligned_cols=39 Identities=31% Similarity=0.424 Sum_probs=34.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~ 117 (173)
.+.+++|+|+++++|+++++.+...|++|+++.++++..
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~ 200 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKL 200 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHH
Confidence 467899999999999999999999999999988876543
No 319
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=97.43 E-value=0.00059 Score=53.56 Aligned_cols=81 Identities=20% Similarity=0.179 Sum_probs=54.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
..+++++|+|+++++|.++++.+...|.+|++++++.+..+.. . . .+... .+|..+.+..+.+.+.. . .
T Consensus 143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~-~g~~~----~~~~~~~~~~~~~~~~~-~-~ 211 (325)
T cd08253 143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-R---Q-AGADA----VFNYRAEDLADRILAAT-A-G 211 (325)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---H-cCCCE----EEeCCCcCHHHHHHHHc-C-C
Confidence 3578999999999999999999999999999999877554333 1 1 12111 24555554444433222 1 2
Q ss_pred CCccEEEEcccC
Q 030706 158 KYVDIWVFMSDL 169 (173)
Q Consensus 158 g~id~lVn~AG~ 169 (173)
..+|.+++++|.
T Consensus 212 ~~~d~vi~~~~~ 223 (325)
T cd08253 212 QGVDVIIEVLAN 223 (325)
T ss_pred CceEEEEECCch
Confidence 369999998764
No 320
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=97.42 E-value=0.0013 Score=55.46 Aligned_cols=77 Identities=25% Similarity=0.289 Sum_probs=52.6
Q ss_pred CCCCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeC
Q 030706 77 MLPPYNVLITGS----------------TKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDV 140 (173)
Q Consensus 77 ~~~~k~~lItGa----------------~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv 140 (173)
.+.||.+|||+| +|-+|+++|+.+..+|++|+++.-... . . .+. .+.++ ++
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~-------~--~p~-~v~~i--~V 319 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L-------A--DPQ-GVKVI--HV 319 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C-------C--CCC-CceEE--Ee
Confidence 489999999998 367999999999999999998874321 0 0 111 24444 34
Q ss_pred CCHHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706 141 SEGNEVADLVAFAQKNLKYVDIWVFMSDLH 170 (173)
Q Consensus 141 ~~~~~v~~~~~~~~~~~g~id~lVn~AG~~ 170 (173)
... +++.+.+.+.+. .|++|.+|++.
T Consensus 320 ~ta---~eM~~av~~~~~-~Di~I~aAAVa 345 (475)
T PRK13982 320 ESA---RQMLAAVEAALP-ADIAIFAAAVA 345 (475)
T ss_pred cCH---HHHHHHHHhhCC-CCEEEEecccc
Confidence 334 444444444444 69999999875
No 321
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.39 E-value=0.00028 Score=53.03 Aligned_cols=47 Identities=28% Similarity=0.438 Sum_probs=39.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 123 (173)
..+.||+++|+|.+ .+|+.+++.|.+.|++|++.+++.+..++..+.
T Consensus 24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 34789999999985 899999999999999999999987665554443
No 322
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.39 E-value=0.0018 Score=53.55 Aligned_cols=48 Identities=25% Similarity=0.370 Sum_probs=41.4
Q ss_pred CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 030706 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122 (173)
Q Consensus 75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 122 (173)
..+.+..+++|+||+|++|+-+++.|.++|..|.++-|+.+..++...
T Consensus 74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 74 NNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 345667899999999999999999999999999999999877666544
No 323
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.39 E-value=0.0018 Score=51.25 Aligned_cols=47 Identities=17% Similarity=0.290 Sum_probs=40.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLR 125 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~ 125 (173)
+.+|.++|.|+ ||.+++++..|++.|. +|+++.|+.++.+++.+++.
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~ 170 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV 170 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence 56888999976 8999999999999995 79999999888877766553
No 324
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.38 E-value=0.0023 Score=52.63 Aligned_cols=76 Identities=26% Similarity=0.295 Sum_probs=52.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.++.++|.|+ |.+|+..++.+...|++|++++++.+..+.... .++. . +..+..+.+.+.+.+
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~----~~g~-~---v~~~~~~~~~l~~~l------- 228 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDA----EFGG-R---IHTRYSNAYEIEDAV------- 228 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----hcCc-e---eEeccCCHHHHHHHH-------
Confidence 35567888877 789999999999999999999998766544322 2222 1 223445555444333
Q ss_pred CCccEEEEcccC
Q 030706 158 KYVDIWVFMSDL 169 (173)
Q Consensus 158 g~id~lVn~AG~ 169 (173)
...|++|+++++
T Consensus 229 ~~aDvVI~a~~~ 240 (370)
T TIGR00518 229 KRADLLIGAVLI 240 (370)
T ss_pred ccCCEEEEcccc
Confidence 357999998855
No 325
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.37 E-value=0.0028 Score=50.25 Aligned_cols=49 Identities=16% Similarity=0.298 Sum_probs=41.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREE 127 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~ 127 (173)
..+|.++|.|+ ||-+++++..|++.|+ +|++++|+.++.+++.+.+...
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~ 174 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA 174 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc
Confidence 55789999987 7999999999999995 7999999998888877766443
No 326
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.37 E-value=0.0032 Score=47.36 Aligned_cols=81 Identities=28% Similarity=0.336 Sum_probs=52.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+.+++++|.| .||+|..+++.|+..|. ++.++|.+. .+.+...+.+.+..+..++..+.
T Consensus 19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 6778889988 57999999999999995 899998762 23444555665555544455444
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
.++.+ +.+.++ +...|++|.+.
T Consensus 98 ~~i~~-~~~~~~-------~~~~D~Vi~~~ 119 (202)
T TIGR02356 98 ERVTA-ENLELL-------INNVDLVLDCT 119 (202)
T ss_pred hcCCH-HHHHHH-------HhCCCEEEECC
Confidence 44432 222222 23578887765
No 327
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.36 E-value=0.0031 Score=44.73 Aligned_cols=77 Identities=21% Similarity=0.280 Sum_probs=55.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHh--CCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEF--GEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
.+.|+|++|.+|..++..|...+ .+++++|++++..+....++.... ...+..... .+.++ +
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------~ 67 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------L 67 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------G
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------c
Confidence 57899999999999999999987 579999999887777777776532 211222222 33332 2
Q ss_pred CCccEEEEcccCCCC
Q 030706 158 KYVDIWVFMSDLHSS 172 (173)
Q Consensus 158 g~id~lVn~AG~~~~ 172 (173)
..-|++|..||....
T Consensus 68 ~~aDivvitag~~~~ 82 (141)
T PF00056_consen 68 KDADIVVITAGVPRK 82 (141)
T ss_dssp TTESEEEETTSTSSS
T ss_pred ccccEEEEecccccc
Confidence 368999999998643
No 328
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.34 E-value=0.00037 Score=56.28 Aligned_cols=79 Identities=18% Similarity=0.261 Sum_probs=47.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHcC-------CEEEEEecChhh--HHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706 82 NVLITGSTKGIGYALAKEFLKAG-------DNVIICSRSAER--VDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF 152 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G-------~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 152 (173)
.++|||++|.+|..++..|+..+ ..|+++++++.. ++....++.+. ...+..|+....++
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~-----~~~~~~~~~~~~~~------ 72 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC-----AFPLLKSVVATTDP------ 72 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc-----cccccCCceecCCH------
Confidence 58999999999999999999855 489999996531 22111111110 00111133222222
Q ss_pred HHHhcCCccEEEEcccCCCC
Q 030706 153 AQKNLKYVDIWVFMSDLHSS 172 (173)
Q Consensus 153 ~~~~~g~id~lVn~AG~~~~ 172 (173)
.+.+...|+||+.||+..+
T Consensus 73 -~~~l~~aDiVI~tAG~~~~ 91 (325)
T cd01336 73 -EEAFKDVDVAILVGAMPRK 91 (325)
T ss_pred -HHHhCCCCEEEEeCCcCCC
Confidence 2233479999999998653
No 329
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.33 E-value=0.0014 Score=51.83 Aligned_cols=49 Identities=27% Similarity=0.394 Sum_probs=42.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREE 127 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~ 127 (173)
..++.++|.|+ ||-+++++..|++.| .+|+++.|+.++.+++.+.+.+.
T Consensus 124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~ 173 (283)
T COG0169 124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL 173 (283)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc
Confidence 46889999986 689999999999999 58999999999988888777654
No 330
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=97.33 E-value=0.0014 Score=53.12 Aligned_cols=81 Identities=14% Similarity=0.125 Sum_probs=50.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
..|.+++|+|++|++|...+......|++|+.+++++++.+....+ .+... ..|..+.+++.+.+.+.. .
T Consensus 157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~----lGa~~----vi~~~~~~~~~~~i~~~~--~ 226 (348)
T PLN03154 157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK----LGFDE----AFNYKEEPDLDAALKRYF--P 226 (348)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh----cCCCE----EEECCCcccHHHHHHHHC--C
Confidence 3578999999999999998877777899999888877654332212 22211 123332223333333322 1
Q ss_pred CCccEEEEccc
Q 030706 158 KYVDIWVFMSD 168 (173)
Q Consensus 158 g~id~lVn~AG 168 (173)
+++|+++.+.|
T Consensus 227 ~gvD~v~d~vG 237 (348)
T PLN03154 227 EGIDIYFDNVG 237 (348)
T ss_pred CCcEEEEECCC
Confidence 36899998876
No 331
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=97.33 E-value=0.0021 Score=50.31 Aligned_cols=81 Identities=21% Similarity=0.243 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
..+++++|+|+++++|++++..+...|++|++++++.+..+.. .++ +. . ..+|..+.+..+++.+.. . .
T Consensus 138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----g~-~---~~~~~~~~~~~~~~~~~~-~-~ 206 (323)
T cd05276 138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL----GA-D---VAINYRTEDFAEEVKEAT-G-G 206 (323)
T ss_pred CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc----CC-C---EEEeCCchhHHHHHHHHh-C-C
Confidence 3578999999999999999999999999999998876554332 221 21 1 123444443333333221 1 2
Q ss_pred CCccEEEEcccC
Q 030706 158 KYVDIWVFMSDL 169 (173)
Q Consensus 158 g~id~lVn~AG~ 169 (173)
+++|++|+++|.
T Consensus 207 ~~~d~vi~~~g~ 218 (323)
T cd05276 207 RGVDVILDMVGG 218 (323)
T ss_pred CCeEEEEECCch
Confidence 469999998774
No 332
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.33 E-value=0.001 Score=56.37 Aligned_cols=45 Identities=24% Similarity=0.409 Sum_probs=38.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 122 (173)
.+.+++++|+|+ ||+|++++..|++.|++|++++|+.++.++..+
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~ 373 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALAS 373 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 357889999996 799999999999999999999998776655443
No 333
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=97.32 E-value=0.00091 Score=53.60 Aligned_cols=76 Identities=17% Similarity=0.190 Sum_probs=58.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
..++|-|++|.-|.-++++|+.+|.+..+.+|+..+++.....|-. ....+.+++ ++.+++.. .+.
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~-----~~~~~p~~~--p~~~~~~~-------~~~ 72 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP-----EAAVFPLGV--PAALEAMA-------SRT 72 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc-----cccccCCCC--HHHHHHHH-------hcc
Confidence 5689999999999999999999999999999999988877776632 233344443 55555444 368
Q ss_pred cEEEEcccCC
Q 030706 161 DIWVFMSDLH 170 (173)
Q Consensus 161 d~lVn~AG~~ 170 (173)
++|+||+|-.
T Consensus 73 ~VVlncvGPy 82 (382)
T COG3268 73 QVVLNCVGPY 82 (382)
T ss_pred eEEEeccccc
Confidence 9999999954
No 334
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.32 E-value=0.001 Score=53.05 Aligned_cols=79 Identities=13% Similarity=0.100 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
.|.+++|+|++|++|..++..+...|++|+.+.+++++.+.. .+ .+... ..|..+.+.+.+.+.+.. .+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~----lGa~~----vi~~~~~~~~~~~~~~~~--~~ 206 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KK----LGFDV----AFNYKTVKSLEETLKKAS--PD 206 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH----cCCCE----EEeccccccHHHHHHHhC--CC
Confidence 578999999999999998877777899999998877654333 22 22211 123333333444443332 13
Q ss_pred CccEEEEccc
Q 030706 159 YVDIWVFMSD 168 (173)
Q Consensus 159 ~id~lVn~AG 168 (173)
++|+++.+.|
T Consensus 207 gvdvv~d~~G 216 (325)
T TIGR02825 207 GYDCYFDNVG 216 (325)
T ss_pred CeEEEEECCC
Confidence 6899998876
No 335
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=97.32 E-value=0.0016 Score=52.54 Aligned_cols=76 Identities=22% Similarity=0.274 Sum_probs=47.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc-C
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL-K 158 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 158 (173)
|.++||+||+||+|...+......|++++++..+.++.+ .+. +.+.. .+ .|..+.+ +.+++.+.. |
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~---~lGAd-~v----i~y~~~~----~~~~v~~~t~g 209 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLK---ELGAD-HV----INYREED----FVEQVRELTGG 209 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHH---hcCCC-EE----EcCCccc----HHHHHHHHcCC
Confidence 899999999999998877777777877666666554433 322 22222 22 2344433 333333333 2
Q ss_pred -CccEEEEccc
Q 030706 159 -YVDIWVFMSD 168 (173)
Q Consensus 159 -~id~lVn~AG 168 (173)
++|+++...|
T Consensus 210 ~gvDvv~D~vG 220 (326)
T COG0604 210 KGVDVVLDTVG 220 (326)
T ss_pred CCceEEEECCC
Confidence 5899998776
No 336
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.28 E-value=0.0019 Score=53.82 Aligned_cols=76 Identities=17% Similarity=0.253 Sum_probs=53.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
.+.+++++|.|+ ||+|..+++.|...| .+++++.|+.++.+....++ +. ... ...+++ .+
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~----~~--~~~-----~~~~~l-------~~ 238 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF----RN--ASA-----HYLSEL-------PQ 238 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh----cC--CeE-----ecHHHH-------HH
Confidence 377899999997 899999999999999 47999999987766655443 21 111 111222 22
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.....|+|||+.+-..
T Consensus 239 ~l~~aDiVI~aT~a~~ 254 (414)
T PRK13940 239 LIKKADIIIAAVNVLE 254 (414)
T ss_pred HhccCCEEEECcCCCC
Confidence 3346899999987644
No 337
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.27 E-value=0.005 Score=50.03 Aligned_cols=81 Identities=30% Similarity=0.348 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh---------------------hhHHHHHHHHHHHhCCceEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA---------------------ERVDSAVQSLREEFGEQHVWG 135 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~ 135 (173)
+..++++|.|+ ||+|..+++.|+..|. ++.++|.+. .+.+...+.+.+..+..++..
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 66778999987 7999999999999995 899998862 223333455555445445666
Q ss_pred EEeeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 136 TKCDVSEGNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 136 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
+..|++. +.+..++ ...|++|.+.
T Consensus 101 ~~~~~~~-~~~~~~~-------~~~DlVid~~ 124 (339)
T PRK07688 101 IVQDVTA-EELEELV-------TGVDLIIDAT 124 (339)
T ss_pred EeccCCH-HHHHHHH-------cCCCEEEEcC
Confidence 6666643 2333332 2467777654
No 338
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.26 E-value=0.0012 Score=51.63 Aligned_cols=72 Identities=18% Similarity=0.233 Sum_probs=51.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
.++|+||++- |+.+++.|.+.|++|+.+.+++...+... . .+ ...+..+.-|.+++.+++.+. ++|
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~-~g---~~~v~~g~l~~~~l~~~l~~~-----~i~ 67 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----I-HQ---ALTVHTGALDPQELREFLKRH-----SID 67 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----c-cC---CceEEECCCCHHHHHHHHHhc-----CCC
Confidence 6899999998 99999999999999999888775432211 1 11 123445666777776666542 799
Q ss_pred EEEEcc
Q 030706 162 IWVFMS 167 (173)
Q Consensus 162 ~lVn~A 167 (173)
+||+.+
T Consensus 68 ~VIDAt 73 (256)
T TIGR00715 68 ILVDAT 73 (256)
T ss_pred EEEEcC
Confidence 999865
No 339
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.24 E-value=0.0046 Score=50.90 Aligned_cols=82 Identities=29% Similarity=0.307 Sum_probs=54.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecC-------------------hhhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+.+++++|.|+ ||+|..+++.|+..|. ++.++|.+ ..+.+...+.+.+..+..++..+.
T Consensus 133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 56777888865 7999999999999995 89999886 344555666666655544455554
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMSD 168 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG 168 (173)
..+.+ +.+..++ ...|+||++..
T Consensus 212 ~~~~~-~~~~~~~-------~~~D~Vv~~~d 234 (376)
T PRK08762 212 ERVTS-DNVEALL-------QDVDVVVDGAD 234 (376)
T ss_pred ccCCh-HHHHHHH-------hCCCEEEECCC
Confidence 44432 2333322 25788887753
No 340
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=97.24 E-value=0.0016 Score=52.24 Aligned_cols=78 Identities=15% Similarity=0.098 Sum_probs=49.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
.+++|+|++|++|.+++......|+ +|+.+++++++.+...+++ +...+ .|..+ +++.+.+.++.. ++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l----Ga~~v----i~~~~-~~~~~~i~~~~~--~g 224 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL----GFDAA----INYKT-DNVAERLRELCP--EG 224 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc----CCcEE----EECCC-CCHHHHHHHHCC--CC
Confidence 7999999999999998877777898 7999988776544333222 32121 23333 223333333321 46
Q ss_pred ccEEEEcccC
Q 030706 160 VDIWVFMSDL 169 (173)
Q Consensus 160 id~lVn~AG~ 169 (173)
+|++|++.|.
T Consensus 225 vd~vid~~g~ 234 (345)
T cd08293 225 VDVYFDNVGG 234 (345)
T ss_pred ceEEEECCCc
Confidence 8999988763
No 341
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.20 E-value=0.0075 Score=46.17 Aligned_cols=82 Identities=18% Similarity=0.272 Sum_probs=54.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecC-------------------hhhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+..++++|.| .||+|..+++.|+..| .++.++|.+ ..+.+...+.+.+..+..++..+.
T Consensus 19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 6677899988 5799999999999999 478887542 123445566666665655666666
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMSD 168 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG 168 (173)
.+++ .+.+.+++ ...|++|.+..
T Consensus 98 ~~i~-~~~~~~~~-------~~~DvVi~~~d 120 (228)
T cd00757 98 ERLD-AENAEELI-------AGYDLVLDCTD 120 (228)
T ss_pred ceeC-HHHHHHHH-------hCCCEEEEcCC
Confidence 6663 33333332 35788887754
No 342
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.17 E-value=0.0038 Score=49.91 Aligned_cols=75 Identities=19% Similarity=0.316 Sum_probs=52.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhC--CceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFG--EQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
.+.|.|+ |++|.+++..|+..| .+|++++++++..+....++.+... ........ .+.++ .
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~-----------l 66 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD-----------C 66 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH-----------h
Confidence 5778886 899999999999999 5899999998888777777755421 11122211 22221 1
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
...|++|+++|...
T Consensus 67 ~~aDIVIitag~~~ 80 (306)
T cd05291 67 KDADIVVITAGAPQ 80 (306)
T ss_pred CCCCEEEEccCCCC
Confidence 37899999999854
No 343
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=97.16 E-value=0.0062 Score=52.00 Aligned_cols=85 Identities=22% Similarity=0.204 Sum_probs=54.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-------------H
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-------------N 144 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-------------~ 144 (173)
..+.+++|.|+ |.+|+..+..+...|++|+++|+++++.+... ++ +. .++..|..+. +
T Consensus 163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-sl----GA---~~v~i~~~e~~~~~~gya~~~s~~ 233 (509)
T PRK09424 163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SM----GA---EFLELDFEEEGGSGDGYAKVMSEE 233 (509)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc----CC---eEEEeccccccccccchhhhcchh
Confidence 45788999986 68999999999899999999999887654332 22 32 2223333221 1
Q ss_pred HHHHHHHHHHHhcCCccEEEEcccCCC
Q 030706 145 EVADLVAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 145 ~v~~~~~~~~~~~g~id~lVn~AG~~~ 171 (173)
..++..+.+.+..+..|++|+++|+-.
T Consensus 234 ~~~~~~~~~~~~~~gaDVVIetag~pg 260 (509)
T PRK09424 234 FIKAEMALFAEQAKEVDIIITTALIPG 260 (509)
T ss_pred HHHHHHHHHHhccCCCCEEEECCCCCc
Confidence 122222222333357999999999743
No 344
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=97.16 E-value=0.0051 Score=50.14 Aligned_cols=80 Identities=23% Similarity=0.250 Sum_probs=50.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
-.|+.+||.||+||+|.+.+.-....|+..+++.++.+.. ++.++ .+... .+|..+++-++.+-+.. .
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~----lGAd~----vvdy~~~~~~e~~kk~~---~ 223 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKK----LGADE----VVDYKDENVVELIKKYT---G 223 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHH----cCCcE----eecCCCHHHHHHHHhhc---C
Confidence 4678999999999999988776666785555555554443 22222 23312 34777744333332211 5
Q ss_pred CCccEEEEcccC
Q 030706 158 KYVDIWVFMSDL 169 (173)
Q Consensus 158 g~id~lVn~AG~ 169 (173)
+++|+|+-|.|-
T Consensus 224 ~~~DvVlD~vg~ 235 (347)
T KOG1198|consen 224 KGVDVVLDCVGG 235 (347)
T ss_pred CCccEEEECCCC
Confidence 689999999886
No 345
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.15 E-value=0.011 Score=45.89 Aligned_cols=82 Identities=21% Similarity=0.268 Sum_probs=53.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEE
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGT 136 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 136 (173)
.+..++++|.|+ ||+|..+++.|+..| .++.++|.+. .+.+...+.+.+..+..++..+
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~ 107 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI 107 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 367788999988 899999999999999 5788887532 2333445556655555455555
Q ss_pred EeeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 137 KCDVSEGNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 137 ~~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
...+++ +.+..++ ...|+||.+.
T Consensus 108 ~~~i~~-~~~~~~~-------~~~DiVi~~~ 130 (245)
T PRK05690 108 NARLDD-DELAALI-------AGHDLVLDCT 130 (245)
T ss_pred eccCCH-HHHHHHH-------hcCCEEEecC
Confidence 554542 2222222 3567777664
No 346
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=97.14 E-value=0.0028 Score=48.51 Aligned_cols=79 Identities=27% Similarity=0.286 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
..+.+++|+|+++ +|++++..+...|.+|++++++++..+.. ... +... .+|..+.+..+.+. ....
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~-g~~~----~~~~~~~~~~~~~~---~~~~ 199 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA----KEL-GADH----VIDYKEEDLEEELR---LTGG 199 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH----HHh-CCce----eccCCcCCHHHHHH---HhcC
Confidence 4578999999988 99999988888899999999886553332 222 2111 12443333333333 2233
Q ss_pred CCccEEEEcccC
Q 030706 158 KYVDIWVFMSDL 169 (173)
Q Consensus 158 g~id~lVn~AG~ 169 (173)
+.+|++|+++|.
T Consensus 200 ~~~d~vi~~~~~ 211 (271)
T cd05188 200 GGADVVIDAVGG 211 (271)
T ss_pred CCCCEEEECCCC
Confidence 579999999875
No 347
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.12 E-value=0.004 Score=49.41 Aligned_cols=41 Identities=24% Similarity=0.387 Sum_probs=36.1
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~ 117 (173)
..+.|++++|.|. |++|+++++.|...|++|++.+|+.+..
T Consensus 147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~ 187 (287)
T TIGR02853 147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADL 187 (287)
T ss_pred CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 3578999999998 6799999999999999999999987654
No 348
>PTZ00325 malate dehydrogenase; Provisional
Probab=97.11 E-value=0.0022 Score=51.70 Aligned_cols=81 Identities=12% Similarity=0.174 Sum_probs=52.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
++.+.+.|+|++|.||..++..|+..+ .+++++|+.. .+....++..... . ....+.+|..++.+.+
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~--~--~~v~~~td~~~~~~~l----- 74 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT--P--AKVTGYADGELWEKAL----- 74 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc--C--ceEEEecCCCchHHHh-----
Confidence 455689999999999999999999766 5899999932 2222223332211 1 1233555544322222
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
...|+||++||...
T Consensus 75 --~gaDvVVitaG~~~ 88 (321)
T PTZ00325 75 --RGADLVLICAGVPR 88 (321)
T ss_pred --CCCCEEEECCCCCC
Confidence 37899999999854
No 349
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=97.08 E-value=0.0064 Score=52.59 Aligned_cols=80 Identities=19% Similarity=0.274 Sum_probs=59.2
Q ss_pred CCCCCEEEEEcCC-chHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHHHHh--CCceEEEEEeeCCCHHHHHHHHHH
Q 030706 77 MLPPYNVLITGST-KGIGYALAKEFLKAGDNVIICSRSA-ERVDSAVQSLREEF--GEQHVWGTKCDVSEGNEVADLVAF 152 (173)
Q Consensus 77 ~~~~k~~lItGa~-~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~l~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~ 152 (173)
...++++||||++ +.||.+++..|+..|++|+++..+- +.-.+..+.|-..+ .+..++.+..+..+..+|+++++-
T Consensus 393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew 472 (866)
T COG4982 393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW 472 (866)
T ss_pred CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence 4678999999987 6799999999999999999886543 22233333333322 223578888999999999999988
Q ss_pred HHHh
Q 030706 153 AQKN 156 (173)
Q Consensus 153 ~~~~ 156 (173)
|..+
T Consensus 473 Ig~e 476 (866)
T COG4982 473 IGDE 476 (866)
T ss_pred hccc
Confidence 7643
No 350
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.08 E-value=0.012 Score=44.70 Aligned_cols=80 Identities=23% Similarity=0.278 Sum_probs=51.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh------------------hhHHHHHHHHHHHhCCceEEEEEe
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSA------------------ERVDSAVQSLREEFGEQHVWGTKC 138 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~ 138 (173)
+..++++|.|+ ||+|..+++.|+..|. +++++|.+. .+.+...+.+.+..+..++..+..
T Consensus 26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~ 104 (212)
T PRK08644 26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE 104 (212)
T ss_pred HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence 56778899885 7999999999999995 698988762 234444555555555445555555
Q ss_pred eCCCHHHHHHHHHHHHHhcCCccEEEEc
Q 030706 139 DVSEGNEVADLVAFAQKNLKYVDIWVFM 166 (173)
Q Consensus 139 Dv~~~~~v~~~~~~~~~~~g~id~lVn~ 166 (173)
.+++ +.+.+++ ...|++|.+
T Consensus 105 ~i~~-~~~~~~~-------~~~DvVI~a 124 (212)
T PRK08644 105 KIDE-DNIEELF-------KDCDIVVEA 124 (212)
T ss_pred ecCH-HHHHHHH-------cCCCEEEEC
Confidence 5543 2222222 356777765
No 351
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.08 E-value=0.0046 Score=49.09 Aligned_cols=47 Identities=15% Similarity=0.220 Sum_probs=37.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChh---hHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAE---RVDSAVQSLR 125 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~---~~~~~~~~l~ 125 (173)
+.+|+++|.|+ ||-+++++..|+..|. +|+++.|+.+ +.+++.+.+.
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~ 172 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN 172 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence 57889999997 5669999999999995 8999999853 5555555543
No 352
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.06 E-value=0.0034 Score=49.74 Aligned_cols=40 Identities=23% Similarity=0.371 Sum_probs=35.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~ 115 (173)
..+.||.++|.|.++-.|+.++..|.+.|++|+++.+...
T Consensus 155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~ 194 (283)
T PRK14192 155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ 194 (283)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch
Confidence 3578999999999888999999999999999999988443
No 353
>PLN00106 malate dehydrogenase
Probab=97.01 E-value=0.002 Score=51.98 Aligned_cols=81 Identities=14% Similarity=0.197 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
..+++.|+|++|.+|..++..|+..+ .+++++|.++ .+....++...... . ...++++.+++.+.
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~--~--~i~~~~~~~d~~~~------- 83 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTP--A--QVRGFLGDDQLGDA------- 83 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcC--c--eEEEEeCCCCHHHH-------
Confidence 34689999999999999999999776 4799999877 22212233322111 1 12244333333332
Q ss_pred cCCccEEEEcccCCCC
Q 030706 157 LKYVDIWVFMSDLHSS 172 (173)
Q Consensus 157 ~g~id~lVn~AG~~~~ 172 (173)
+...|++|+.||+..+
T Consensus 84 l~~aDiVVitAG~~~~ 99 (323)
T PLN00106 84 LKGADLVIIPAGVPRK 99 (323)
T ss_pred cCCCCEEEEeCCCCCC
Confidence 3479999999998654
No 354
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.01 E-value=0.027 Score=39.36 Aligned_cols=80 Identities=23% Similarity=0.361 Sum_probs=55.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecC-------------------hhhHHHHHHHHHHHhCCceEEEEEee
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS-------------------AERVDSAVQSLREEFGEQHVWGTKCD 139 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D 139 (173)
.++++|.|+ |++|..+++.|+..|. ++.++|.+ ..+.+...+.+.+..+..++..+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 356788775 6999999999999995 78888763 12345556666666666678887777
Q ss_pred CCCHHHHHHHHHHHHHhcCCccEEEEccc
Q 030706 140 VSEGNEVADLVAFAQKNLKYVDIWVFMSD 168 (173)
Q Consensus 140 v~~~~~v~~~~~~~~~~~g~id~lVn~AG 168 (173)
+ +.+...+++ ...|++|.+..
T Consensus 81 ~-~~~~~~~~~-------~~~d~vi~~~d 101 (135)
T PF00899_consen 81 I-DEENIEELL-------KDYDIVIDCVD 101 (135)
T ss_dssp C-SHHHHHHHH-------HTSSEEEEESS
T ss_pred c-ccccccccc-------cCCCEEEEecC
Confidence 7 334444444 25788887643
No 355
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.98 E-value=0.0062 Score=50.90 Aligned_cols=45 Identities=24% Similarity=0.448 Sum_probs=37.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQS 123 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~ 123 (173)
+.+++++|.|+ |.+|..+++.|...|+ +|++++|+.+..+....+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~ 225 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE 225 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence 67899999986 8999999999999996 899999988776555443
No 356
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.98 E-value=0.015 Score=47.63 Aligned_cols=81 Identities=17% Similarity=0.156 Sum_probs=56.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+.+++++|.|+ ||+|..+++.|+..| .++.++|.+. .+.+...+.+.+..+..++..+.
T Consensus 26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 66788999987 799999999999999 5888887642 24455666677666665666666
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
..++.. ....++ ...|+||.+.
T Consensus 105 ~~i~~~-~~~~~~-------~~~DvVvd~~ 126 (355)
T PRK05597 105 RRLTWS-NALDEL-------RDADVILDGS 126 (355)
T ss_pred eecCHH-HHHHHH-------hCCCEEEECC
Confidence 666532 222222 2578888765
No 357
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.95 E-value=0.017 Score=42.41 Aligned_cols=75 Identities=24% Similarity=0.287 Sum_probs=47.4
Q ss_pred EEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh------------------hhHHHHHHHHHHHhCCceEEEEEeeCCCH
Q 030706 83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRSA------------------ERVDSAVQSLREEFGEQHVWGTKCDVSEG 143 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~ 143 (173)
++|.|+ ||+|..+++.|+..|. +++++|.+. .+.+...+.+.+..+..++..+...+..
T Consensus 2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~- 79 (174)
T cd01487 2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE- 79 (174)
T ss_pred EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh-
Confidence 567774 8999999999999995 699998764 2233344555555555456555555533
Q ss_pred HHHHHHHHHHHHhcCCccEEEEc
Q 030706 144 NEVADLVAFAQKNLKYVDIWVFM 166 (173)
Q Consensus 144 ~~v~~~~~~~~~~~g~id~lVn~ 166 (173)
+.+.+++ ...|++|.+
T Consensus 80 ~~~~~~l-------~~~DlVi~~ 95 (174)
T cd01487 80 NNLEGLF-------GDCDIVVEA 95 (174)
T ss_pred hhHHHHh-------cCCCEEEEC
Confidence 2222222 356777765
No 358
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=96.94 E-value=0.0071 Score=47.46 Aligned_cols=81 Identities=22% Similarity=0.209 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
..+++++|+|+++++|.+++..+...|++|+++.++.+..+.. .+ .+. .. ..+..+.+..+.+.+. .. .
T Consensus 138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~----~g~-~~---~~~~~~~~~~~~~~~~-~~-~ 206 (325)
T TIGR02824 138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EA----LGA-DI---AINYREEDFVEVVKAE-TG-G 206 (325)
T ss_pred CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH----cCC-cE---EEecCchhHHHHHHHH-cC-C
Confidence 3578999999999999999998888999999998876554322 21 221 11 1233333333332222 11 1
Q ss_pred CCccEEEEcccC
Q 030706 158 KYVDIWVFMSDL 169 (173)
Q Consensus 158 g~id~lVn~AG~ 169 (173)
+++|++|+++|.
T Consensus 207 ~~~d~~i~~~~~ 218 (325)
T TIGR02824 207 KGVDVILDIVGG 218 (325)
T ss_pred CCeEEEEECCch
Confidence 359999998763
No 359
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.94 E-value=0.0072 Score=50.44 Aligned_cols=44 Identities=27% Similarity=0.521 Sum_probs=37.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQ 122 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~ 122 (173)
+.+++++|.|+ |.+|..+++.|...| .+|++++|+.+..++...
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~ 222 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAK 222 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence 67899999997 999999999999999 789999998876554444
No 360
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=96.93 E-value=0.007 Score=49.01 Aligned_cols=74 Identities=22% Similarity=0.291 Sum_probs=48.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
-.|+.++|+|.+ |+|...++.....|++|+.+++++++.+...+ + +.. . ..|-+|.+.++.+-+
T Consensus 165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l----GAd--~--~i~~~~~~~~~~~~~------ 228 (339)
T COG1064 165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L----GAD--H--VINSSDSDALEAVKE------ 228 (339)
T ss_pred CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h----CCc--E--EEEcCCchhhHHhHh------
Confidence 468999999998 99976666555589999999999887654332 2 221 1 123334444444332
Q ss_pred CCccEEEEccc
Q 030706 158 KYVDIWVFMSD 168 (173)
Q Consensus 158 g~id~lVn~AG 168 (173)
.+|++|++++
T Consensus 229 -~~d~ii~tv~ 238 (339)
T COG1064 229 -IADAIIDTVG 238 (339)
T ss_pred -hCcEEEECCC
Confidence 1788888776
No 361
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.93 E-value=0.023 Score=40.07 Aligned_cols=77 Identities=23% Similarity=0.284 Sum_probs=49.9
Q ss_pred EEEEcCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706 83 VLITGSTKGIGYALAKEFLKAGD-NVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTKCDVSE 142 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~ 142 (173)
++|.|+ ||+|..+++.|+..|. ++.++|.+. .+.+...+.+.+..+..++..+..++.+
T Consensus 2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~ 80 (143)
T cd01483 2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE 80 (143)
T ss_pred EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence 677776 8999999999999995 788887541 2334445556655555456666555543
Q ss_pred HHHHHHHHHHHHHhcCCccEEEEccc
Q 030706 143 GNEVADLVAFAQKNLKYVDIWVFMSD 168 (173)
Q Consensus 143 ~~~v~~~~~~~~~~~g~id~lVn~AG 168 (173)
... .+.+...|++|.+..
T Consensus 81 ~~~--------~~~~~~~diVi~~~d 98 (143)
T cd01483 81 DNL--------DDFLDGVDLVIDAID 98 (143)
T ss_pred hhH--------HHHhcCCCEEEECCC
Confidence 321 222346788887654
No 362
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.92 E-value=0.0062 Score=46.60 Aligned_cols=74 Identities=22% Similarity=0.387 Sum_probs=52.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCcc
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVD 161 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 161 (173)
.++|.|+ |-+|+.+|+.|.+.|++|++++++++..++.... . .....+.+|-+|++.++++ .....|
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---~---~~~~~v~gd~t~~~~L~~a------gi~~aD 68 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---E---LDTHVVIGDATDEDVLEEA------GIDDAD 68 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---h---cceEEEEecCCCHHHHHhc------CCCcCC
Confidence 4566665 6899999999999999999999998876553321 1 1367778898888876654 112567
Q ss_pred EEEEccc
Q 030706 162 IWVFMSD 168 (173)
Q Consensus 162 ~lVn~AG 168 (173)
++|...|
T Consensus 69 ~vva~t~ 75 (225)
T COG0569 69 AVVAATG 75 (225)
T ss_pred EEEEeeC
Confidence 7765544
No 363
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=96.91 E-value=0.0083 Score=47.62 Aligned_cols=41 Identities=22% Similarity=0.333 Sum_probs=34.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 118 (173)
..|.+++|+|++|++|.+++......|++|+.+.+++++.+
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~ 182 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVA 182 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 35789999999999999988877778999999888776543
No 364
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=96.91 E-value=0.01 Score=47.15 Aligned_cols=79 Identities=15% Similarity=0.164 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
.+.+++|.|+++++|.+++..+...|++|+.+.++.+..+...+. .+... ..|..+.+..+++. +.. . +
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~----~g~~~----~~~~~~~~~~~~v~-~~~-~-~ 213 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEE----LGFDA----AINYKTPDLAEALK-EAA-P-D 213 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhh----cCCce----EEecCChhHHHHHH-Hhc-c-C
Confidence 578999999999999999988888999999998877554332211 12111 12333333223222 222 1 4
Q ss_pred CccEEEEccc
Q 030706 159 YVDIWVFMSD 168 (173)
Q Consensus 159 ~id~lVn~AG 168 (173)
.+|++|+++|
T Consensus 214 ~~d~vi~~~g 223 (329)
T cd05288 214 GIDVYFDNVG 223 (329)
T ss_pred CceEEEEcch
Confidence 6899998876
No 365
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.91 E-value=0.0041 Score=50.21 Aligned_cols=75 Identities=17% Similarity=0.226 Sum_probs=48.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHcC-C------EEEEEecCh--hhHHHHHHHHHHHhCCceEEEEEeeCCCHH--HHH--H
Q 030706 82 NVLITGSTKGIGYALAKEFLKAG-D------NVIICSRSA--ERVDSAVQSLREEFGEQHVWGTKCDVSEGN--EVA--D 148 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G-~------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~--~v~--~ 148 (173)
.+.|+|++|.+|..++..|+..| + .++++|+++ +.. .....|+.|.. ... .
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~----------------~g~~~Dl~d~~~~~~~~~~ 65 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL----------------EGVVMELQDCAFPLLKGVV 65 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc----------------ceeeeehhhhcccccCCcE
Confidence 57899999999999999999876 2 499999876 322 22234444431 000 0
Q ss_pred HHHHHHHhcCCccEEEEcccCCCC
Q 030706 149 LVAFAQKNLKYVDIWVFMSDLHSS 172 (173)
Q Consensus 149 ~~~~~~~~~g~id~lVn~AG~~~~ 172 (173)
+.....+.+...|++|+.||...+
T Consensus 66 i~~~~~~~~~~aDiVVitAG~~~~ 89 (323)
T cd00704 66 ITTDPEEAFKDVDVAILVGAFPRK 89 (323)
T ss_pred EecChHHHhCCCCEEEEeCCCCCC
Confidence 001223344579999999998653
No 366
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.88 E-value=0.0069 Score=50.69 Aligned_cols=59 Identities=20% Similarity=0.369 Sum_probs=42.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVAD 148 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~ 148 (173)
.++|.|+ |.+|+.+++.|.+.|..|++++++++..+...+.. .+.++..|.++.+.+++
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~-------~~~~~~gd~~~~~~l~~ 60 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL-------DVRTVVGNGSSPDVLRE 60 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc-------CEEEEEeCCCCHHHHHH
Confidence 5788887 89999999999999999999999887655433211 24455566666554443
No 367
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=96.88 E-value=0.0055 Score=49.44 Aligned_cols=76 Identities=14% Similarity=0.251 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
.+++++|+|+ |++|...+..+...|+ +|+++++++++.+.. .+ .+... ..|..+. ++.+ +.+..
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~----lGa~~----vi~~~~~-~~~~----~~~~~ 233 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-RE----MGADK----LVNPQND-DLDH----YKAEK 233 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HH----cCCcE----EecCCcc-cHHH----HhccC
Confidence 5789999986 8999998887777897 688899887665432 22 23211 1243332 2222 22233
Q ss_pred CCccEEEEcccC
Q 030706 158 KYVDIWVFMSDL 169 (173)
Q Consensus 158 g~id~lVn~AG~ 169 (173)
|.+|++|.++|.
T Consensus 234 g~~D~vid~~G~ 245 (343)
T PRK09880 234 GYFDVSFEVSGH 245 (343)
T ss_pred CCCCEEEECCCC
Confidence 569999999884
No 368
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=96.88 E-value=0.0062 Score=56.02 Aligned_cols=77 Identities=21% Similarity=0.241 Sum_probs=57.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcC-CE-------------EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAG-DN-------------VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGN 144 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G-~~-------------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~ 144 (173)
..|.++|.|+ |.||...++.|++.. +. |++++++.+..++..+.+ . ++..+++|++|.+
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~--~~~~v~lDv~D~e 640 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----E--NAEAVQLDVSDSE 640 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----C--CCceEEeecCCHH
Confidence 3678999996 899999999998863 33 788888876665544432 2 3567899999998
Q ss_pred HHHHHHHHHHHhcCCccEEEEcccC
Q 030706 145 EVADLVAFAQKNLKYVDIWVFMSDL 169 (173)
Q Consensus 145 ~v~~~~~~~~~~~g~id~lVn~AG~ 169 (173)
++.++++ .+|+||++...
T Consensus 641 ~L~~~v~-------~~DaVIsalP~ 658 (1042)
T PLN02819 641 SLLKYVS-------QVDVVISLLPA 658 (1042)
T ss_pred HHHHhhc-------CCCEEEECCCc
Confidence 8776654 48999998653
No 369
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.86 E-value=0.0034 Score=48.03 Aligned_cols=62 Identities=18% Similarity=0.232 Sum_probs=45.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGD---NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.++|||++|-+|.+|.+.+.++|. +.++.+. -.+|+++.++++++|+..
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-----------------------kd~DLt~~a~t~~lF~~e---- 54 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-----------------------KDADLTNLADTRALFESE---- 54 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-----------------------ccccccchHHHHHHHhcc----
Confidence 6799999999999999999998874 2222211 157899999999998775
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
++-.||+.|+..
T Consensus 55 -kPthVIhlAAmV 66 (315)
T KOG1431|consen 55 -KPTHVIHLAAMV 66 (315)
T ss_pred -CCceeeehHhhh
Confidence 455566666543
No 370
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.83 E-value=0.024 Score=42.60 Aligned_cols=35 Identities=29% Similarity=0.414 Sum_probs=30.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecC
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRS 113 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~ 113 (173)
+..++++|.|+ ||+|..++..|+..|. +++++|.+
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 56778999987 7899999999999996 79999876
No 371
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.83 E-value=0.0095 Score=46.79 Aligned_cols=41 Identities=34% Similarity=0.454 Sum_probs=35.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 118 (173)
..+++++|+|+++++|.+++..+...|++|++++++.+..+
T Consensus 143 ~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~ 183 (328)
T cd08268 143 RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRD 183 (328)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 35789999999999999999999999999999988765544
No 372
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.78 E-value=0.012 Score=47.20 Aligned_cols=45 Identities=27% Similarity=0.425 Sum_probs=37.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQS 123 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~ 123 (173)
+.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++...+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~ 221 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE 221 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence 57889999987 899999999999877 5799999988776555444
No 373
>PLN00203 glutamyl-tRNA reductase
Probab=96.78 E-value=0.011 Score=50.63 Aligned_cols=46 Identities=26% Similarity=0.452 Sum_probs=39.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL 124 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l 124 (173)
+.++.++|.|+ |.+|..+++.|...|. +|+++.|+.+..+....++
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~ 310 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF 310 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence 67899999998 9999999999999996 7999999987776655443
No 374
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.78 E-value=0.028 Score=46.23 Aligned_cols=81 Identities=21% Similarity=0.318 Sum_probs=53.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecC-------------------hhhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS-------------------AERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+.+.+++|.|+ ||+|..+++.|+..| .+++++|.+ ..+.+...+.+.+..+..++..+.
T Consensus 39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 117 (370)
T PRK05600 39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR 117 (370)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence 66778888876 699999999999999 589998875 123444555566555554566665
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
..++ .+.+.+++ ...|+||.+.
T Consensus 118 ~~i~-~~~~~~~~-------~~~DlVid~~ 139 (370)
T PRK05600 118 ERLT-AENAVELL-------NGVDLVLDGS 139 (370)
T ss_pred eecC-HHHHHHHH-------hCCCEEEECC
Confidence 5554 22333332 2578887764
No 375
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=96.77 E-value=0.0073 Score=46.84 Aligned_cols=74 Identities=24% Similarity=0.245 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HHHH----HHHhCCceEEEEEeeCCCHHHHHHHHHHH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA-VQSL----REEFGEQHVWGTKCDVSEGNEVADLVAFA 153 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~l----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 153 (173)
..|++||||-+|-=|..+++.|+..|+.|-.+-|........ ++.+ ....+ ......-.|++|...+.++++.+
T Consensus 27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~-~~mkLHYgDmTDss~L~k~I~~i 105 (376)
T KOG1372|consen 27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNG-ASMKLHYGDMTDSSCLIKLISTI 105 (376)
T ss_pred cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhccc-ceeEEeeccccchHHHHHHHhcc
Confidence 347999999999999999999999999998776654333211 1222 11112 35667778999999999999887
No 376
>PRK08223 hypothetical protein; Validated
Probab=96.75 E-value=0.02 Score=45.37 Aligned_cols=81 Identities=16% Similarity=0.190 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+....++|.|+ ||+|..+++.|+..| .++.++|.+. .+.+...+.+.+..+..++..+.
T Consensus 25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~ 103 (287)
T PRK08223 25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP 103 (287)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 56778888876 699999999999999 5888887641 23344455666655655666666
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
..++.. .+.+++ ...|+||.+.
T Consensus 104 ~~l~~~-n~~~ll-------~~~DlVvD~~ 125 (287)
T PRK08223 104 EGIGKE-NADAFL-------DGVDVYVDGL 125 (287)
T ss_pred cccCcc-CHHHHH-------hCCCEEEECC
Confidence 566532 233333 2568877654
No 377
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.75 E-value=0.043 Score=41.61 Aligned_cols=42 Identities=33% Similarity=0.507 Sum_probs=36.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS 123 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 123 (173)
++.|.||+|.+|.+++..|++.|++|++.+|+++..+.....
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 478999999999999999999999999999988776655443
No 378
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=96.73 E-value=0.029 Score=47.93 Aligned_cols=81 Identities=22% Similarity=0.203 Sum_probs=54.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC-------------CHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS-------------EGN 144 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-------------~~~ 144 (173)
..+.+++|.|+ |.+|...+..+...|+.|++++++.+..+... .+ + ..++..|.. ..+
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~l----G---a~~v~v~~~e~g~~~~gYa~~~s~~ 232 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SM----G---AEFLELDFKEEGGSGDGYAKVMSEE 232 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc----C---CeEEeccccccccccccceeecCHH
Confidence 44578999985 89999999999999999999999887543322 12 2 223344432 133
Q ss_pred HHHHHHHHHHHhcCCccEEEEcc
Q 030706 145 EVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 145 ~v~~~~~~~~~~~g~id~lVn~A 167 (173)
..++..+.+.+.....|++|+++
T Consensus 233 ~~~~~~~~~~e~~~~~DIVI~Ta 255 (511)
T TIGR00561 233 FIAAEMELFAAQAKEVDIIITTA 255 (511)
T ss_pred HHHHHHHHHHHHhCCCCEEEECc
Confidence 44444455555567899999999
No 379
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.72 E-value=0.034 Score=43.03 Aligned_cols=81 Identities=26% Similarity=0.313 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+.+.+++|.|+ ||+|..+++.|+..| .+++++|.+. .+.+...+.+.+..+..++..+.
T Consensus 22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~ 100 (240)
T TIGR02355 22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN 100 (240)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 66778888875 699999999999999 5888887642 12344455566555554555554
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
..+++ +.+.+++ ...|++|.+.
T Consensus 101 ~~i~~-~~~~~~~-------~~~DlVvd~~ 122 (240)
T TIGR02355 101 AKLDD-AELAALI-------AEHDIVVDCT 122 (240)
T ss_pred ccCCH-HHHHHHh-------hcCCEEEEcC
Confidence 33432 2233322 3567777654
No 380
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.72 E-value=0.0092 Score=40.30 Aligned_cols=58 Identities=24% Similarity=0.340 Sum_probs=40.8
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHH
Q 030706 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADL 149 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~ 149 (173)
++|.|. |.+|+.+++.|.+.+.+|++++.+++..+...+. .+.++.+|.++++.++++
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~--------~~~~i~gd~~~~~~l~~a 58 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE--------GVEVIYGDATDPEVLERA 58 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT--------TSEEEES-TTSHHHHHHT
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc--------ccccccccchhhhHHhhc
Confidence 467776 5799999999999777999999998765444321 144666777777766543
No 381
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.71 E-value=0.012 Score=46.84 Aligned_cols=39 Identities=28% Similarity=0.408 Sum_probs=34.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~ 116 (173)
.+.+++++|.|. |++|+.++..|...|++|++++|+.+.
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~ 187 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH 187 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 357899999997 679999999999999999999998654
No 382
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=96.68 E-value=0.026 Score=45.40 Aligned_cols=78 Identities=14% Similarity=0.184 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHHHHhCC-ceEEEEEeeCCCHHHHHHHHHHHHH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGD--NVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVSEGNEVADLVAFAQK 155 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~ 155 (173)
.++.+.|+|+ |.+|..++..|+..|. .++++|++++.++....++.....- .++... . .+.+
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~----------- 69 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYS----------- 69 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHH-----------
Confidence 3568999998 9999999999999884 7999999888877777777654221 122221 1 2222
Q ss_pred hcCCccEEEEcccCCC
Q 030706 156 NLKYVDIWVFMSDLHS 171 (173)
Q Consensus 156 ~~g~id~lVn~AG~~~ 171 (173)
.+..-|++|..||...
T Consensus 70 ~~~~adivIitag~~~ 85 (315)
T PRK00066 70 DCKDADLVVITAGAPQ 85 (315)
T ss_pred HhCCCCEEEEecCCCC
Confidence 1236899999998854
No 383
>PRK08328 hypothetical protein; Provisional
Probab=96.68 E-value=0.041 Score=42.23 Aligned_cols=35 Identities=23% Similarity=0.415 Sum_probs=29.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecC
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRS 113 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~ 113 (173)
+.+++++|.|+ ||+|.++++.|+..| .+++++|.+
T Consensus 25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 56778888875 699999999999999 578888754
No 384
>PRK05086 malate dehydrogenase; Provisional
Probab=96.67 E-value=0.0026 Score=51.10 Aligned_cols=35 Identities=26% Similarity=0.362 Sum_probs=28.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHH-c--CCEEEEEecChh
Q 030706 81 YNVLITGSTKGIGYALAKEFLK-A--GDNVIICSRSAE 115 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~-~--G~~V~~~~r~~~ 115 (173)
+.++|.|++|++|.+++..|.. . +..+++.++++.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~ 38 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV 38 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence 3689999999999999998855 2 357888888743
No 385
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.65 E-value=0.0084 Score=43.87 Aligned_cols=43 Identities=21% Similarity=0.393 Sum_probs=36.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 119 (173)
.+.+|+++|.|++.-+|..+++.|.++|++|+++.|+.+.+.+
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~ 83 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE 83 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH
Confidence 4889999999996667999999999999999999998654433
No 386
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.64 E-value=0.026 Score=47.82 Aligned_cols=77 Identities=17% Similarity=0.155 Sum_probs=50.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE-RVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
+.++.++|.|+ |++|.++|+.|.+.|++|+++++... ......+.+++. + +.++..+-.. .
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~-g---v~~~~~~~~~-------------~ 75 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL-G---ATVRLGPGPT-------------L 75 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc-C---CEEEECCCcc-------------c
Confidence 56789999986 77999999999999999999986543 222333444432 1 3333222111 0
Q ss_pred cCCccEEEEcccCCCC
Q 030706 157 LKYVDIWVFMSDLHSS 172 (173)
Q Consensus 157 ~g~id~lVn~AG~~~~ 172 (173)
....|.||...|+.+.
T Consensus 76 ~~~~D~Vv~s~Gi~~~ 91 (480)
T PRK01438 76 PEDTDLVVTSPGWRPD 91 (480)
T ss_pred cCCCCEEEECCCcCCC
Confidence 1257899998888653
No 387
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.63 E-value=0.025 Score=45.46 Aligned_cols=77 Identities=17% Similarity=0.269 Sum_probs=49.9
Q ss_pred EEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706 83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTKCDVSE 142 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~ 142 (173)
++|.|+ ||+|-++++.|+..| .++.++|.+. .+.+...+.+.+..+..++..+..++.+
T Consensus 2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~ 80 (312)
T cd01489 2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD 80 (312)
T ss_pred EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence 677775 899999999999999 5788887531 2333445555555555566666667765
Q ss_pred HHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 143 GNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 143 ~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
.....++ +...|+||++.
T Consensus 81 ~~~~~~f-------~~~~DvVv~a~ 98 (312)
T cd01489 81 PDFNVEF-------FKQFDLVFNAL 98 (312)
T ss_pred ccchHHH-------HhcCCEEEECC
Confidence 3211222 23678888764
No 388
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.61 E-value=0.032 Score=42.92 Aligned_cols=82 Identities=18% Similarity=0.204 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+.+.+++|.|. ||+|..+++.|+..| .+++++|.+. .+.+.+.+.+.+..+..++..+.
T Consensus 9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~ 87 (231)
T cd00755 9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE 87 (231)
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence 55677888875 699999999999999 5888887542 13344455555555554566555
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
..++ ++....++. ...|++|.+.
T Consensus 88 ~~i~-~~~~~~l~~------~~~D~Vvdai 110 (231)
T cd00755 88 EFLT-PDNSEDLLG------GDPDFVVDAI 110 (231)
T ss_pred eecC-HhHHHHHhc------CCCCEEEEcC
Confidence 5554 233333331 2578888764
No 389
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.61 E-value=0.038 Score=43.44 Aligned_cols=83 Identities=14% Similarity=0.208 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+.+..++|.|+ ||+|..+++.|+..| .++.++|.+. .+.+.+.+.+....+..++..+.
T Consensus 28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~ 106 (268)
T PRK15116 28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD 106 (268)
T ss_pred hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence 56778888875 699999999999999 6888887641 11223344444444544454442
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMSD 168 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG 168 (173)
+.-+++.+..++. ...|+||.+.+
T Consensus 107 -~~i~~e~~~~ll~------~~~D~VIdaiD 130 (268)
T PRK15116 107 -DFITPDNVAEYMS------AGFSYVIDAID 130 (268)
T ss_pred -cccChhhHHHHhc------CCCCEEEEcCC
Confidence 2223444444331 25788887754
No 390
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.60 E-value=0.038 Score=39.92 Aligned_cols=85 Identities=21% Similarity=0.222 Sum_probs=55.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH-------HHHhCCceEEEEEeeCCCHHHHHHHHHH--
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL-------REEFGEQHVWGTKCDVSEGNEVADLVAF-- 152 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l-------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-- 152 (173)
++-+.|- |-+|..+++.|++.|++|++.+|++++.++..+.- .+... ....+..=+.+.+++++++..
T Consensus 3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~--~~dvvi~~v~~~~~v~~v~~~~~ 79 (163)
T PF03446_consen 3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAE--QADVVILCVPDDDAVEAVLFGEN 79 (163)
T ss_dssp EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHH--HBSEEEE-SSSHHHHHHHHHCTT
T ss_pred EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhh--cccceEeecccchhhhhhhhhhH
Confidence 5666665 78999999999999999999999987776654321 10000 123334457888888888887
Q ss_pred HHHhcCCccEEEEcccC
Q 030706 153 AQKNLKYVDIWVFMSDL 169 (173)
Q Consensus 153 ~~~~~g~id~lVn~AG~ 169 (173)
+......=.++|++.-+
T Consensus 80 i~~~l~~g~iiid~sT~ 96 (163)
T PF03446_consen 80 ILAGLRPGKIIIDMSTI 96 (163)
T ss_dssp HGGGS-TTEEEEE-SS-
T ss_pred HhhccccceEEEecCCc
Confidence 66665555667765543
No 391
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=96.52 E-value=0.0023 Score=50.32 Aligned_cols=84 Identities=15% Similarity=0.127 Sum_probs=59.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
.|.++||||.|.||...+..++..- .+.+.++.-.-... ...++..-...+..+++.|+.+...+..++..
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~----- 78 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPVRNSPNYKFVEGDIADADLVLYLFET----- 78 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhhccCCCceEeeccccchHHHHhhhcc-----
Confidence 3889999999999999999998863 56666554211111 22222222345799999999999988877654
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
..+|.|||-|+..
T Consensus 79 ~~id~vihfaa~t 91 (331)
T KOG0747|consen 79 EEIDTVIHFAAQT 91 (331)
T ss_pred CchhhhhhhHhhh
Confidence 3799999988754
No 392
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=96.51 E-value=0.0051 Score=38.72 Aligned_cols=33 Identities=30% Similarity=0.335 Sum_probs=21.6
Q ss_pred CEEEEEcCCchHHHHHHHHHH-HcCCEEEEEecC
Q 030706 81 YNVLITGSTKGIGYALAKEFL-KAGDNVIICSRS 113 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~-~~G~~V~~~~r~ 113 (173)
|++||+|+++|.|++..-.++ ..|++.+.+...
T Consensus 40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE 73 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE 73 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred ceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence 899999999999999444444 457777766643
No 393
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=96.50 E-value=0.02 Score=45.19 Aligned_cols=79 Identities=18% Similarity=0.161 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
.+..++|+|+++++|.+++..+...|++|+.++++.+..+.. .+ .+. .. ..|..+.+..+.+.+. . ...
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~----~g~-~~---~~~~~~~~~~~~~~~~-~-~~~ 210 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RA----LGA-DV---AVDYTRPDWPDQVREA-L-GGG 210 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH----cCC-CE---EEecCCccHHHHHHHH-c-CCC
Confidence 467899999999999999888888899999998877654332 22 221 11 1244443333332221 1 112
Q ss_pred CccEEEEccc
Q 030706 159 YVDIWVFMSD 168 (173)
Q Consensus 159 ~id~lVn~AG 168 (173)
.+|+++++.|
T Consensus 211 ~~d~vl~~~g 220 (324)
T cd08244 211 GVTVVLDGVG 220 (324)
T ss_pred CceEEEECCC
Confidence 5899998865
No 394
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=96.50 E-value=0.025 Score=46.90 Aligned_cols=42 Identities=19% Similarity=0.226 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRSAERVDSA 120 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~ 120 (173)
.|.+++|.|++|++|...+..+...|+ +|+++++++++.+..
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a 219 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA 219 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence 467899999999999987776555543 799999988765543
No 395
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=96.44 E-value=0.031 Score=45.59 Aligned_cols=80 Identities=15% Similarity=0.149 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCC-HHHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSE-GNEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 155 (173)
..|.+++|+|+ |+||...+..+...|+ +|+++++++++.+.. .++ +... ..|..+ .+++.+.+.++..
T Consensus 184 ~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~----Ga~~----~i~~~~~~~~~~~~v~~~~~ 253 (368)
T TIGR02818 184 EEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL----GATD----CVNPNDYDKPIQEVIVEITD 253 (368)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh----CCCe----EEcccccchhHHHHHHHHhC
Confidence 35789999975 8999998887777898 799998887664433 222 2211 224332 2233333333322
Q ss_pred hcCCccEEEEcccC
Q 030706 156 NLKYVDIWVFMSDL 169 (173)
Q Consensus 156 ~~g~id~lVn~AG~ 169 (173)
+.+|++|.++|.
T Consensus 254 --~g~d~vid~~G~ 265 (368)
T TIGR02818 254 --GGVDYSFECIGN 265 (368)
T ss_pred --CCCCEEEECCCC
Confidence 368999998874
No 396
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.43 E-value=0.06 Score=45.27 Aligned_cols=38 Identities=26% Similarity=0.422 Sum_probs=33.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 119 (173)
++.|.||.|+||.++++.|.+.|++|++.+|+++...+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~ 39 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE 39 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH
Confidence 58899999999999999999999999999998765433
No 397
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=96.42 E-value=0.016 Score=46.42 Aligned_cols=79 Identities=20% Similarity=0.200 Sum_probs=49.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
..|.+++|+|+ |++|..++..+...|++ |+++++++++.+.. .++ +... .+|..+.+ .+++.+ ...
T Consensus 162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~----ga~~----~i~~~~~~-~~~~~~-~~~- 228 (339)
T cd08239 162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL----GADF----VINSGQDD-VQEIRE-LTS- 228 (339)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh----CCCE----EEcCCcch-HHHHHH-HhC-
Confidence 35789999986 89999998888888988 99988877654332 222 2211 23444433 333322 111
Q ss_pred cCCccEEEEcccC
Q 030706 157 LKYVDIWVFMSDL 169 (173)
Q Consensus 157 ~g~id~lVn~AG~ 169 (173)
...+|++|.+.|.
T Consensus 229 ~~~~d~vid~~g~ 241 (339)
T cd08239 229 GAGADVAIECSGN 241 (339)
T ss_pred CCCCCEEEECCCC
Confidence 1268999988764
No 398
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=96.42 E-value=0.058 Score=41.58 Aligned_cols=78 Identities=19% Similarity=0.269 Sum_probs=49.6
Q ss_pred EEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706 83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTKCDVSE 142 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~ 142 (173)
++|.| .||+|-++++.|+..| .++.++|.+. .+.+.+.+.+.+..+..++..+..++.+
T Consensus 2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~ 80 (234)
T cd01484 2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP 80 (234)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence 56666 6799999999999999 5788887642 1233334455555555567777767754
Q ss_pred HHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 143 GNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 143 ~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
.+.... +-+.++|++|++.
T Consensus 81 ~~~~~~------~f~~~~DvVi~a~ 99 (234)
T cd01484 81 EQDFND------TFFEQFHIIVNAL 99 (234)
T ss_pred hhhchH------HHHhCCCEEEECC
Confidence 332211 1234689888763
No 399
>PRK04148 hypothetical protein; Provisional
Probab=96.41 E-value=0.012 Score=41.45 Aligned_cols=56 Identities=18% Similarity=0.186 Sum_probs=40.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGN 144 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~ 144 (173)
+++.+++.|.+ .|.+++..|.+.|++|+++|.++...+...+. .+.++..|+.+++
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~--------~~~~v~dDlf~p~ 71 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL--------GLNAFVDDLFNPN 71 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--------CCeEEECcCCCCC
Confidence 34678999976 67788999999999999999998765444222 2455566665543
No 400
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=96.39 E-value=0.029 Score=36.13 Aligned_cols=35 Identities=29% Similarity=0.577 Sum_probs=30.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEec
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKA-GDNVIICSR 112 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~-G~~V~~~~r 112 (173)
.+.+|+++|.|. |+.|+.++..|.+. +.+|.+.+|
T Consensus 20 ~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 20 SLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 377899999998 99999999999998 578888877
No 401
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.39 E-value=0.075 Score=39.84 Aligned_cols=81 Identities=20% Similarity=0.287 Sum_probs=50.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh---------------------hhHHHHHHHHHHHhCCceEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA---------------------ERVDSAVQSLREEFGEQHVWG 135 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~ 135 (173)
+...+++|.|++ |+|..+++.|+..| .++.++|.+. .+.+...+.+++..+..++..
T Consensus 17 L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~ 95 (198)
T cd01485 17 LRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI 95 (198)
T ss_pred HhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence 556778888765 69999999999999 4788887541 122334455666556555665
Q ss_pred EEeeCCC-HHHHHHHHHHHHHhcCCccEEEEc
Q 030706 136 TKCDVSE-GNEVADLVAFAQKNLKYVDIWVFM 166 (173)
Q Consensus 136 ~~~Dv~~-~~~v~~~~~~~~~~~g~id~lVn~ 166 (173)
+..++.+ .+...+++ ...|++|.+
T Consensus 96 ~~~~~~~~~~~~~~~~-------~~~dvVi~~ 120 (198)
T cd01485 96 VEEDSLSNDSNIEEYL-------QKFTLVIAT 120 (198)
T ss_pred EecccccchhhHHHHH-------hCCCEEEEC
Confidence 5555542 22222222 357888765
No 402
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.36 E-value=0.053 Score=37.46 Aligned_cols=81 Identities=23% Similarity=0.353 Sum_probs=53.4
Q ss_pred EEEEEcCCchHHHHHHHHHHH-cCCEEE-EEecChh-hH----H-------------HHHHHHHHHhCCceEEEEEeeCC
Q 030706 82 NVLITGSTKGIGYALAKEFLK-AGDNVI-ICSRSAE-RV----D-------------SAVQSLREEFGEQHVWGTKCDVS 141 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~-~G~~V~-~~~r~~~-~~----~-------------~~~~~l~~~~~~~~~~~~~~Dv~ 141 (173)
.+.|.|++|-+|+.+++.+.+ .+.+++ .++++.+ .. . ...+++... . . +.+|++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-~--D---VvIDfT 75 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-A--D---VVIDFT 75 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH----S---EEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-C--C---EEEEcC
Confidence 588999999999999999999 577755 4566551 00 0 011222111 1 1 456999
Q ss_pred CHHHHHHHHHHHHHhcCCccEEEEcccCC
Q 030706 142 EGNEVADLVAFAQKNLKYVDIWVFMSDLH 170 (173)
Q Consensus 142 ~~~~v~~~~~~~~~~~g~id~lVn~AG~~ 170 (173)
.++.+...++.+.+. ++.+|+-..|..
T Consensus 76 ~p~~~~~~~~~~~~~--g~~~ViGTTG~~ 102 (124)
T PF01113_consen 76 NPDAVYDNLEYALKH--GVPLVIGTTGFS 102 (124)
T ss_dssp -HHHHHHHHHHHHHH--T-EEEEE-SSSH
T ss_pred ChHHhHHHHHHHHhC--CCCEEEECCCCC
Confidence 999999999888877 788888777763
No 403
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.33 E-value=0.043 Score=46.04 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+|+++|+|.+ ++|.++++.|+++|+.|++.+...... ...+++.... .+.++..+.. .. .+
T Consensus 3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~--gi~~~~g~~~-~~----~~------- 65 (445)
T PRK04308 3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFD--GLVFYTGRLK-DA----LD------- 65 (445)
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccC--CcEEEeCCCC-HH----HH-------
Confidence 457899999975 899999999999999999998765431 1223332111 2333322211 11 11
Q ss_pred CCccEEEEcccCCCC
Q 030706 158 KYVDIWVFMSDLHSS 172 (173)
Q Consensus 158 g~id~lVn~AG~~~~ 172 (173)
...|.||...|+...
T Consensus 66 ~~~d~vv~spgi~~~ 80 (445)
T PRK04308 66 NGFDILALSPGISER 80 (445)
T ss_pred hCCCEEEECCCCCCC
Confidence 257999999998754
No 404
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.31 E-value=0.041 Score=43.17 Aligned_cols=40 Identities=35% Similarity=0.428 Sum_probs=34.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~ 117 (173)
..+.+++|.|+++++|.+++......|++|+.+..+++..
T Consensus 141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~ 180 (320)
T cd08243 141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA 180 (320)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 3578999999999999999888888899999888876553
No 405
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.31 E-value=0.059 Score=40.37 Aligned_cols=80 Identities=24% Similarity=0.371 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+..++++|.|+ ||+|..+++.|+..| .++.++|.+. .+.+...+.+++..+..++..+.
T Consensus 19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~ 97 (197)
T cd01492 19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT 97 (197)
T ss_pred HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence 56678888875 669999999999999 4788887541 12344455566666654555554
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
..+.+ ...++ +.+.|++|.+.
T Consensus 98 ~~~~~--~~~~~-------~~~~dvVi~~~ 118 (197)
T cd01492 98 DDISE--KPEEF-------FSQFDVVVATE 118 (197)
T ss_pred cCccc--cHHHH-------HhCCCEEEECC
Confidence 44431 11122 23578887654
No 406
>PLN02740 Alcohol dehydrogenase-like
Probab=96.29 E-value=0.035 Score=45.48 Aligned_cols=80 Identities=16% Similarity=0.141 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~ 155 (173)
..|.+++|.|+ |+||...+..+...|+ +|+++++++++.+.. .+ .+... .+|..+. +++.+.+.++..
T Consensus 197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~----~Ga~~----~i~~~~~~~~~~~~v~~~~~ 266 (381)
T PLN02740 197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KE----MGITD----FINPKDSDKPVHERIREMTG 266 (381)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HH----cCCcE----EEecccccchHHHHHHHHhC
Confidence 45789999985 8999998888778898 699998887664433 22 22211 1243332 123333333322
Q ss_pred hcCCccEEEEcccC
Q 030706 156 NLKYVDIWVFMSDL 169 (173)
Q Consensus 156 ~~g~id~lVn~AG~ 169 (173)
+.+|++|.++|.
T Consensus 267 --~g~dvvid~~G~ 278 (381)
T PLN02740 267 --GGVDYSFECAGN 278 (381)
T ss_pred --CCCCEEEECCCC
Confidence 269999999884
No 407
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.28 E-value=0.025 Score=47.31 Aligned_cols=63 Identities=27% Similarity=0.365 Sum_probs=46.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVA 147 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~ 147 (173)
...+.++|.|+ |.+|+.+++.|.+.|.+|++++++++..+...++ +. .+.++..|.++.+.++
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~--~~~~i~gd~~~~~~L~ 291 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LP--NTLVLHGDGTDQELLE 291 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CC--CCeEEECCCCCHHHHH
Confidence 44678999998 8999999999999999999999988765544332 11 2445566777666544
No 408
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.27 E-value=0.021 Score=42.15 Aligned_cols=43 Identities=28% Similarity=0.477 Sum_probs=33.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHH
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLR 125 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 125 (173)
++.|.|+ |-+|..++..++..|++|.+.+++++.++...+.+.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~ 43 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE 43 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence 3567776 899999999999999999999999887766555444
No 409
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.25 E-value=0.032 Score=46.66 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=35.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~ 117 (173)
.+.|++++|.|. |.||+.++..+...|++|+++++++...
T Consensus 209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra 248 (425)
T PRK05476 209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA 248 (425)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence 478999999996 6899999999999999999999887553
No 410
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.25 E-value=0.03 Score=44.49 Aligned_cols=41 Identities=27% Similarity=0.234 Sum_probs=34.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 118 (173)
..+..++|.|+++++|.+++......|++|+.+.++++..+
T Consensus 138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (329)
T cd08250 138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE 178 (329)
T ss_pred CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence 45789999999999999988888888999999888765543
No 411
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=96.23 E-value=0.028 Score=45.81 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=51.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~ 155 (173)
..|.+++|.|+ |++|...+..+...|+ +|+++++++++.+.. .+ .+... ..|..+. +++.+.+.++..
T Consensus 185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~----lGa~~----~i~~~~~~~~~~~~v~~~~~ 254 (368)
T cd08300 185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KK----FGATD----CVNPKDHDKPIQQVLVEMTD 254 (368)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HH----cCCCE----EEcccccchHHHHHHHHHhC
Confidence 35789999975 8999998888888898 699999887765432 22 22211 1243332 234444444332
Q ss_pred hcCCccEEEEcccC
Q 030706 156 NLKYVDIWVFMSDL 169 (173)
Q Consensus 156 ~~g~id~lVn~AG~ 169 (173)
+++|++|.+.|-
T Consensus 255 --~g~d~vid~~g~ 266 (368)
T cd08300 255 --GGVDYTFECIGN 266 (368)
T ss_pred --CCCcEEEECCCC
Confidence 369999998773
No 412
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.21 E-value=0.034 Score=43.41 Aligned_cols=45 Identities=16% Similarity=0.324 Sum_probs=37.5
Q ss_pred EEEEcCCchHHHHHHHHHHHcC----CEEEEEecChhhHHHHHHHHHHH
Q 030706 83 VLITGSTKGIGYALAKEFLKAG----DNVIICSRSAERVDSAVQSLREE 127 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G----~~V~~~~r~~~~~~~~~~~l~~~ 127 (173)
+.|.|++|.+|..++..|+..| .+|++.|.+++.++....++...
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~ 49 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDA 49 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHh
Confidence 3688998899999999999988 68999999887777766666543
No 413
>PRK14851 hypothetical protein; Provisional
Probab=96.20 E-value=0.072 Score=47.24 Aligned_cols=81 Identities=12% Similarity=0.105 Sum_probs=55.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+.+.+++|.| .||+|..+++.|+..| .++.++|.+. .+.+...+.+.+..+..++..+.
T Consensus 41 L~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~ 119 (679)
T PRK14851 41 LAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFP 119 (679)
T ss_pred HhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence 6778899998 5799999999999999 5788876531 22333445555555655677777
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
..++ .+.+..+++ ++|+||.+.
T Consensus 120 ~~i~-~~n~~~~l~-------~~DvVid~~ 141 (679)
T PRK14851 120 AGIN-ADNMDAFLD-------GVDVVLDGL 141 (679)
T ss_pred cCCC-hHHHHHHHh-------CCCEEEECC
Confidence 7775 344444443 578888765
No 414
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=96.19 E-value=0.018 Score=46.58 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=48.6
Q ss_pred EEEEcCCchHHHHHHHHHHHcC-C------EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHH--HHH--H
Q 030706 83 VLITGSTKGIGYALAKEFLKAG-D------NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVA--DLV--A 151 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G-~------~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~--~~~--~ 151 (173)
+.|+|++|.+|..++..|+..| + .++++|+++... .......|+.|..... ... .
T Consensus 2 V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~--------------~a~g~~~Dl~d~~~~~~~~~~~~~ 67 (324)
T TIGR01758 2 VVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK--------------VLEGVVMELMDCAFPLLDGVVPTH 67 (324)
T ss_pred EEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc--------------ccceeEeehhcccchhcCceeccC
Confidence 7899999999999999999866 2 599999865320 1222344555444110 000 0
Q ss_pred HHHHhcCCccEEEEcccCCCC
Q 030706 152 FAQKNLKYVDIWVFMSDLHSS 172 (173)
Q Consensus 152 ~~~~~~g~id~lVn~AG~~~~ 172 (173)
...+.+...|++|+.||...+
T Consensus 68 ~~~~~~~~aDiVVitAG~~~~ 88 (324)
T TIGR01758 68 DPAVAFTDVDVAILVGAFPRK 88 (324)
T ss_pred ChHHHhCCCCEEEEcCCCCCC
Confidence 113444679999999998643
No 415
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=96.18 E-value=0.037 Score=44.78 Aligned_cols=35 Identities=26% Similarity=0.296 Sum_probs=29.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~ 113 (173)
..+++++|+|+ |++|...+..+...|++|++++++
T Consensus 171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~ 205 (355)
T cd08230 171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR 205 (355)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence 36789999985 999999887777779999999984
No 416
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=96.17 E-value=0.072 Score=43.02 Aligned_cols=40 Identities=18% Similarity=0.288 Sum_probs=33.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 118 (173)
..|.+++|.|+ |++|...+..+...|++|+++++++++.+
T Consensus 165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~ 204 (349)
T TIGR03201 165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLE 204 (349)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence 35789999999 99999988888888999999988876654
No 417
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=96.17 E-value=0.084 Score=42.60 Aligned_cols=40 Identities=15% Similarity=0.228 Sum_probs=33.2
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERV 117 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~ 117 (173)
|...+.+.|.| +|.+|..++..++..| ..|+++|.+++..
T Consensus 3 ~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~ 43 (321)
T PTZ00082 3 MIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIP 43 (321)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchh
Confidence 34557889999 5889999999999999 4899999988754
No 418
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p. This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.
Probab=96.16 E-value=0.054 Score=47.42 Aligned_cols=89 Identities=17% Similarity=0.300 Sum_probs=54.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh----------------------hhHHHHHHHHHHHhCCceEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA----------------------ERVDSAVQSLREEFGEQHVW 134 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~----------------------~~~~~~~~~l~~~~~~~~~~ 134 (173)
+...+++|.|+ ||+|-.+++.|+..| .+++++|.+. .+.+.+.+.+.+..+..++.
T Consensus 336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~ 414 (664)
T TIGR01381 336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQAT 414 (664)
T ss_pred HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEE
Confidence 35678888886 699999999999999 5788887521 12334455666666665666
Q ss_pred EEEeeC------CCHH---HHHHHHHHHHHhcCCccEEEEcc
Q 030706 135 GTKCDV------SEGN---EVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 135 ~~~~Dv------~~~~---~v~~~~~~~~~~~g~id~lVn~A 167 (173)
.+...| -+++ .+.+-++.+.+.+...|+||.+.
T Consensus 415 ~~~~~Ipm~Gh~i~~~~~~~~~~d~~~l~~Li~~~DvV~d~t 456 (664)
T TIGR01381 415 GHRLTVPMPGHPIDEKDVPELEKDIARLEQLIKDHDVVFLLL 456 (664)
T ss_pred EeeeeeccccccCCchhhhhccccHHHHHHHHhhCCEEEECC
Confidence 666553 1222 22222222333334568887764
No 419
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=96.14 E-value=0.044 Score=43.77 Aligned_cols=38 Identities=21% Similarity=0.194 Sum_probs=32.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~ 115 (173)
..+++++|.|+++++|.+++......|++|+++.++.+
T Consensus 145 ~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (341)
T cd08290 145 QPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP 182 (341)
T ss_pred CCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence 35789999999999999998888888999888877653
No 420
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=96.14 E-value=0.057 Score=42.74 Aligned_cols=41 Identities=29% Similarity=0.386 Sum_probs=34.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 119 (173)
.+.+++|.|+++++|.+++......|++|+++.+++++.+.
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 186 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADY 186 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHH
Confidence 35799999999999999988888889999999888765433
No 421
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=96.13 E-value=0.058 Score=43.09 Aligned_cols=57 Identities=19% Similarity=0.380 Sum_probs=38.0
Q ss_pred EEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh---------------------hhHHHHHHHHHHHhCCceEEEEEeeC
Q 030706 83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSA---------------------ERVDSAVQSLREEFGEQHVWGTKCDV 140 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv 140 (173)
++|.|+ ||+|-.+++.|+..| .+++++|.+. .+.+.+.+.+.+..+..++..+...|
T Consensus 2 VLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~~I 80 (307)
T cd01486 2 CLLLGA-GTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVLSI 80 (307)
T ss_pred EEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeeeec
Confidence 566665 699999999999999 5788876421 12334555666666655666665444
No 422
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.13 E-value=0.027 Score=41.38 Aligned_cols=41 Identities=32% Similarity=0.246 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~ 117 (173)
..+.|+++.|.|. |.||+++++.+...|.+|+..++.....
T Consensus 32 ~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~ 72 (178)
T PF02826_consen 32 RELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPE 72 (178)
T ss_dssp S-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHH
T ss_pred cccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChh
Confidence 3488999999985 7999999999999999999999987653
No 423
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=96.11 E-value=0.046 Score=42.57 Aligned_cols=41 Identities=27% Similarity=0.352 Sum_probs=34.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 118 (173)
..+.+++|.|+++++|.+++......|++|++++++++..+
T Consensus 135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 175 (320)
T cd05286 135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAE 175 (320)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 35789999999999999999888888999999887766543
No 424
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=96.11 E-value=0.046 Score=43.21 Aligned_cols=40 Identities=23% Similarity=0.174 Sum_probs=34.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 118 (173)
.|.+++|.|+++++|.+++......|++|+++..+.+..+
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~ 178 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVA 178 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHH
Confidence 5789999999999999998888888999998887765533
No 425
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=96.10 E-value=0.041 Score=43.02 Aligned_cols=41 Identities=29% Similarity=0.436 Sum_probs=34.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 118 (173)
..+..++|+|+++++|.+++..+...|+.|+.++++.+..+
T Consensus 138 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (323)
T cd08241 138 QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA 178 (323)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence 35789999999999999999988889999999988765433
No 426
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=96.08 E-value=0.049 Score=44.34 Aligned_cols=38 Identities=24% Similarity=0.248 Sum_probs=30.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~ 117 (173)
.|++++|.|+ |++|..++..+...|++|++++.+.++.
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~ 220 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKE 220 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchh
Confidence 5788999765 8999998887777899988887765543
No 427
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=96.07 E-value=0.075 Score=42.29 Aligned_cols=77 Identities=19% Similarity=0.164 Sum_probs=45.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYV 160 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 160 (173)
.+++++||+|++|...+......|++|+++++++++.+... + .+... + .|..+.+..++ +.+.... .++
T Consensus 145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~----~-~g~~~--~--i~~~~~~~~~~-v~~~~~~-~~~ 213 (324)
T cd08291 145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK----K-IGAEY--V--LNSSDPDFLED-LKELIAK-LNA 213 (324)
T ss_pred cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----H-cCCcE--E--EECCCccHHHH-HHHHhCC-CCC
Confidence 44555699999999988766667999999988776543332 1 23211 1 23333322222 2222111 258
Q ss_pred cEEEEccc
Q 030706 161 DIWVFMSD 168 (173)
Q Consensus 161 d~lVn~AG 168 (173)
|++|++.|
T Consensus 214 d~vid~~g 221 (324)
T cd08291 214 TIFFDAVG 221 (324)
T ss_pred cEEEECCC
Confidence 99998876
No 428
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=96.06 E-value=0.075 Score=42.04 Aligned_cols=40 Identities=38% Similarity=0.449 Sum_probs=33.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 118 (173)
.+..++|.|+++++|.+++..+...|++++++.++++..+
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 179 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVD 179 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 5789999999999999999988889999888887765433
No 429
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.04 E-value=0.042 Score=45.73 Aligned_cols=46 Identities=28% Similarity=0.496 Sum_probs=40.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVDSAVQSL 124 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l 124 (173)
+.+++++|.|+ |-+|.-++++|.++| .+|+++.|+.++.+++..++
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~ 222 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL 222 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh
Confidence 78999999997 579999999999999 68999999998888777665
No 430
>PTZ00117 malate dehydrogenase; Provisional
Probab=95.98 E-value=0.087 Score=42.45 Aligned_cols=39 Identities=15% Similarity=0.211 Sum_probs=32.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecChhhHH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSAERVD 118 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~~~~~ 118 (173)
..+.+.|.|+ |.+|..++..++..| ..|+++|.+++..+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~ 43 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQ 43 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccch
Confidence 4567899997 889999999999988 78999999876544
No 431
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.98 E-value=0.043 Score=43.80 Aligned_cols=43 Identities=16% Similarity=0.221 Sum_probs=37.5
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 118 (173)
..+.||++.|.|.++-+|+.++..|.++|++|.++++.....+
T Consensus 155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~ 197 (301)
T PRK14194 155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK 197 (301)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence 3578999999999999999999999999999999987655433
No 432
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=95.98 E-value=0.068 Score=43.49 Aligned_cols=80 Identities=19% Similarity=0.175 Sum_probs=49.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~ 155 (173)
..|.+++|.|+ |++|...+..+...|+ +|+++++++++.+.+ ++ .+... ..|..+. +.+.+.+.++..
T Consensus 186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~----~Ga~~----~i~~~~~~~~~~~~v~~~~~ 255 (369)
T cd08301 186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KK----FGVTE----FVNPKDHDKPVQEVIAEMTG 255 (369)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH----cCCce----EEcccccchhHHHHHHHHhC
Confidence 35789999985 8999998887777898 799998887654432 22 23211 1233321 234444444332
Q ss_pred hcCCccEEEEcccC
Q 030706 156 NLKYVDIWVFMSDL 169 (173)
Q Consensus 156 ~~g~id~lVn~AG~ 169 (173)
+.+|++|.+.|.
T Consensus 256 --~~~d~vid~~G~ 267 (369)
T cd08301 256 --GGVDYSFECTGN 267 (369)
T ss_pred --CCCCEEEECCCC
Confidence 368999998764
No 433
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=95.98 E-value=0.072 Score=43.56 Aligned_cols=79 Identities=15% Similarity=0.207 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHHh
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQKN 156 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~ 156 (173)
.+.+++|.| .+++|.+++..+...|+ +|++++++.++.+.. .++ +... ..+..+. ++....+.+...
T Consensus 190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~l----Ga~~----~i~~~~~~~~~~~~v~~~~~- 258 (373)
T cd08299 190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KEL----GATE----CINPQDYKKPIQEVLTEMTD- 258 (373)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc----CCce----EecccccchhHHHHHHHHhC-
Confidence 467899996 58999999888888898 799998877654433 222 2111 1222221 122333333322
Q ss_pred cCCccEEEEcccC
Q 030706 157 LKYVDIWVFMSDL 169 (173)
Q Consensus 157 ~g~id~lVn~AG~ 169 (173)
+.+|++|++.|.
T Consensus 259 -~~~d~vld~~g~ 270 (373)
T cd08299 259 -GGVDFSFEVIGR 270 (373)
T ss_pred -CCCeEEEECCCC
Confidence 469999998773
No 434
>PLN02827 Alcohol dehydrogenase-like
Probab=95.97 E-value=0.069 Score=43.81 Aligned_cols=80 Identities=15% Similarity=0.154 Sum_probs=49.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~ 155 (173)
..|.+++|.|+ |++|..++......|+ .|+++++++++.+.. .+ .+...+ .|..+. +++.+.+.++..
T Consensus 192 ~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~----lGa~~~----i~~~~~~~~~~~~v~~~~~ 261 (378)
T PLN02827 192 SKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KT----FGVTDF----INPNDLSEPIQQVIKRMTG 261 (378)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HH----cCCcEE----EcccccchHHHHHHHHHhC
Confidence 45889999985 8999998887777897 477777776554322 22 232111 233321 234444443322
Q ss_pred hcCCccEEEEcccC
Q 030706 156 NLKYVDIWVFMSDL 169 (173)
Q Consensus 156 ~~g~id~lVn~AG~ 169 (173)
+.+|++|.++|.
T Consensus 262 --~g~d~vid~~G~ 273 (378)
T PLN02827 262 --GGADYSFECVGD 273 (378)
T ss_pred --CCCCEEEECCCC
Confidence 369999999884
No 435
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=95.97 E-value=0.069 Score=43.84 Aligned_cols=37 Identities=27% Similarity=0.254 Sum_probs=30.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~ 116 (173)
.|.+++|.|+ |++|...+......|++|++++.+.+.
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~ 214 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEK 214 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHH
Confidence 5788999876 899999888777789999988876543
No 436
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.97 E-value=0.033 Score=39.51 Aligned_cols=43 Identities=23% Similarity=0.333 Sum_probs=37.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 119 (173)
.++||.++|.|.+.-+|+.++..|.++|++|.+++++...+++
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~ 67 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS 67 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 4889999999999999999999999999999999875544443
No 437
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.96 E-value=0.048 Score=41.77 Aligned_cols=36 Identities=25% Similarity=0.528 Sum_probs=32.2
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEecC
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGD---NVIICSRS 113 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~---~V~~~~r~ 113 (173)
.+++++++|.|+ |+.|.+++..|.+.|. +|++++|+
T Consensus 22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 377889999997 8999999999999995 59999998
No 438
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=95.94 E-value=0.061 Score=42.42 Aligned_cols=40 Identities=23% Similarity=0.185 Sum_probs=34.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~ 117 (173)
..+.+++|.|+++++|.+++..+...|++|+++.++.+..
T Consensus 137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~ 176 (323)
T cd05282 137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQV 176 (323)
T ss_pred CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHH
Confidence 3577999999999999999998888999999888876553
No 439
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=95.92 E-value=0.13 Score=37.61 Aligned_cols=79 Identities=14% Similarity=0.072 Sum_probs=55.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc--
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL-- 157 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-- 157 (173)
...++|-||-|.+|.++++.|-.+++-|.-+|..+... .. .-+.+..|-+=.|+-+.+++++.+.+
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~-----------Ad-~sI~V~~~~swtEQe~~v~~~vg~sL~g 70 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ-----------AD-SSILVDGNKSWTEQEQSVLEQVGSSLQG 70 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc-----------cc-ceEEecCCcchhHHHHHHHHHHHHhhcc
Confidence 35689999999999999999999999998887654321 11 12233444443455566777776665
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
.++|.+++-||-.
T Consensus 71 ekvDav~CVAGGW 83 (236)
T KOG4022|consen 71 EKVDAVFCVAGGW 83 (236)
T ss_pred cccceEEEeeccc
Confidence 3799999988754
No 440
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.91 E-value=0.12 Score=41.49 Aligned_cols=78 Identities=12% Similarity=0.141 Sum_probs=52.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCc-eEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQ-HVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
..+.|+|+ |.+|..++..|+..| ..++++|.+.+.++....++....+-. ...... -.|.++ +
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~--~~dy~~-----------~ 69 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA--DKDYSV-----------T 69 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE--CCCHHH-----------h
Confidence 36888996 999999999999887 479999998877766666666543110 011111 122221 2
Q ss_pred CCccEEEEcccCCCC
Q 030706 158 KYVDIWVFMSDLHSS 172 (173)
Q Consensus 158 g~id~lVn~AG~~~~ 172 (173)
..-|++|.+||....
T Consensus 70 ~~adivvitaG~~~k 84 (312)
T cd05293 70 ANSKVVIVTAGARQN 84 (312)
T ss_pred CCCCEEEECCCCCCC
Confidence 368999999998653
No 441
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=95.89 E-value=0.046 Score=44.57 Aligned_cols=79 Identities=20% Similarity=0.244 Sum_probs=48.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
..+.+++|.|+ |++|...+..+...|+ +|+++++++++.+-. .+ .+... .+|..+.+..++ +.+..
T Consensus 190 ~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~----~Ga~~----~i~~~~~~~~~~-i~~~~-- 256 (371)
T cd08281 190 RPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RE----LGATA----TVNAGDPNAVEQ-VRELT-- 256 (371)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HH----cCCce----EeCCCchhHHHH-HHHHh--
Confidence 35789999985 8999988877777898 688888877654322 22 22211 224333332222 22221
Q ss_pred cCCccEEEEcccC
Q 030706 157 LKYVDIWVFMSDL 169 (173)
Q Consensus 157 ~g~id~lVn~AG~ 169 (173)
.+.+|++|.+.|.
T Consensus 257 ~~g~d~vid~~G~ 269 (371)
T cd08281 257 GGGVDYAFEMAGS 269 (371)
T ss_pred CCCCCEEEECCCC
Confidence 1368999988763
No 442
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.87 E-value=0.19 Score=37.82 Aligned_cols=36 Identities=25% Similarity=0.332 Sum_probs=32.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~ 114 (173)
+++|.++|.|| |.+|...++.|.+.|++|+++++..
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 78999999998 7899999999999999999998653
No 443
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=95.87 E-value=0.11 Score=41.66 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~ 113 (173)
.|.+++|+|+++++|.+++......|++|+++.++
T Consensus 162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~ 196 (350)
T cd08248 162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST 196 (350)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence 38899999999999999998888889998887754
No 444
>PRK07877 hypothetical protein; Provisional
Probab=95.86 E-value=0.093 Score=46.82 Aligned_cols=80 Identities=15% Similarity=0.132 Sum_probs=56.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecCh------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSA------------------ERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+..++|+|.|. | +|..++..|+..| .+++++|.+. .+.+...+.+.+..+..++..+.
T Consensus 105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~ 182 (722)
T PRK07877 105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT 182 (722)
T ss_pred HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence 57789999999 4 9999999999998 4888887631 23344455566655665777777
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
..++ .+.++++++ +.|+||.|.
T Consensus 183 ~~i~-~~n~~~~l~-------~~DlVvD~~ 204 (722)
T PRK07877 183 DGLT-EDNVDAFLD-------GLDVVVEEC 204 (722)
T ss_pred ccCC-HHHHHHHhc-------CCCEEEECC
Confidence 7776 455555543 578888764
No 445
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=95.85 E-value=0.094 Score=41.75 Aligned_cols=41 Identities=24% Similarity=0.322 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 119 (173)
.+.+++|.|+++.+|.+++..+...|++|+.++++.+..+.
T Consensus 162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~ 202 (334)
T PRK13771 162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKI 202 (334)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 46789999999999999998888889999998887766543
No 446
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.82 E-value=0.094 Score=42.53 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~ 115 (173)
.+.||++.|.|. |.||+.+++.|...|.+|+..+++..
T Consensus 147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~ 184 (333)
T PRK13243 147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK 184 (333)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 488999999997 89999999999999999999998653
No 447
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.80 E-value=0.037 Score=43.92 Aligned_cols=41 Identities=20% Similarity=0.302 Sum_probs=36.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~ 117 (173)
.+.||+++|.|.+.-+|+.++..|..+|++|+++.+....+
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l 195 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDM 195 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH
Confidence 48899999999999999999999999999999998865433
No 448
>PRK07411 hypothetical protein; Validated
Probab=95.79 E-value=0.15 Score=42.34 Aligned_cols=82 Identities=23% Similarity=0.201 Sum_probs=54.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+...+++|.|+ ||+|..+++.|+..| .++.++|.+. .+.+...+.+.+..+..++..+.
T Consensus 36 L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~ 114 (390)
T PRK07411 36 LKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE 114 (390)
T ss_pred HhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 56678888876 699999999999999 5788887531 23344556666666655666666
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMSD 168 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG 168 (173)
..++.. ...+++ ...|+||.+..
T Consensus 115 ~~~~~~-~~~~~~-------~~~D~Vvd~~d 137 (390)
T PRK07411 115 TRLSSE-NALDIL-------APYDVVVDGTD 137 (390)
T ss_pred cccCHH-hHHHHH-------hCCCEEEECCC
Confidence 556543 222222 35788887753
No 449
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=95.79 E-value=0.044 Score=44.46 Aligned_cols=80 Identities=19% Similarity=0.191 Sum_probs=47.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKN 156 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 156 (173)
..+.+++|.|+ |++|...+......|++ |+++++++++.+.. ++ .+... ..|..+.+..+.+ .+...
T Consensus 175 ~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~----~Ga~~----~i~~~~~~~~~~i-~~~~~- 242 (358)
T TIGR03451 175 KRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-RE----FGATH----TVNSSGTDPVEAI-RALTG- 242 (358)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH----cCCce----EEcCCCcCHHHHH-HHHhC-
Confidence 35789999975 99999988877778984 88888877654332 22 22211 1243333222222 22211
Q ss_pred cCCccEEEEcccC
Q 030706 157 LKYVDIWVFMSDL 169 (173)
Q Consensus 157 ~g~id~lVn~AG~ 169 (173)
...+|++|.+.|.
T Consensus 243 ~~g~d~vid~~g~ 255 (358)
T TIGR03451 243 GFGADVVIDAVGR 255 (358)
T ss_pred CCCCCEEEECCCC
Confidence 1258999998874
No 450
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.79 E-value=0.091 Score=42.27 Aligned_cols=80 Identities=23% Similarity=0.265 Sum_probs=52.8
Q ss_pred CCCCCCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCC-CHHHHHHHHH
Q 030706 74 REPMLPPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVS-EGNEVADLVA 151 (173)
Q Consensus 74 ~~~~~~~k~~lItGa~~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-~~~~v~~~~~ 151 (173)
...+..|+.+-|+|+.| ||. ++-++++ .|++|+++++...+-++..+.| +.. . -+|.+ |++.++++.+
T Consensus 176 ~~g~~pG~~vgI~GlGG-LGh-~aVq~AKAMG~rV~vis~~~~kkeea~~~L----GAd--~--fv~~~~d~d~~~~~~~ 245 (360)
T KOG0023|consen 176 RSGLGPGKWVGIVGLGG-LGH-MAVQYAKAMGMRVTVISTSSKKKEEAIKSL----GAD--V--FVDSTEDPDIMKAIMK 245 (360)
T ss_pred HcCCCCCcEEEEecCcc-cch-HHHHHHHHhCcEEEEEeCCchhHHHHHHhc----Ccc--e--eEEecCCHHHHHHHHH
Confidence 33445899999999887 995 4555554 5999999999876666665554 221 1 23666 7777666654
Q ss_pred HHHHhcCCccEEEEc
Q 030706 152 FAQKNLKYVDIWVFM 166 (173)
Q Consensus 152 ~~~~~~g~id~lVn~ 166 (173)
.. .+.+|.++|-
T Consensus 246 ~~---dg~~~~v~~~ 257 (360)
T KOG0023|consen 246 TT---DGGIDTVSNL 257 (360)
T ss_pred hh---cCcceeeeec
Confidence 33 2566777654
No 451
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=95.76 E-value=0.094 Score=41.04 Aligned_cols=38 Identities=26% Similarity=0.343 Sum_probs=30.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEecChhhH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDN-VIICSRSAERV 117 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~-V~~~~r~~~~~ 117 (173)
.+++++|.|+ |+||...+..+...|++ |+++++++++.
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 6789999986 89999988877778986 88887776554
No 452
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=95.76 E-value=0.091 Score=42.73 Aligned_cols=80 Identities=15% Similarity=0.182 Sum_probs=48.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCH-HHHHHHHHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEG-NEVADLVAFAQK 155 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~ 155 (173)
..|.+++|.| .|++|...+......|+ +|+.+++++++.+.. .++ +...+ .|..+. +.+.+.+.+...
T Consensus 183 ~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~----ga~~~----i~~~~~~~~~~~~~~~~~~ 252 (365)
T cd08277 183 EPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEF----GATDF----INPKDSDKPVSEVIREMTG 252 (365)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc----CCCcE----eccccccchHHHHHHHHhC
Confidence 4578999997 58999998887777898 798898876654332 222 22111 122221 122233333322
Q ss_pred hcCCccEEEEcccC
Q 030706 156 NLKYVDIWVFMSDL 169 (173)
Q Consensus 156 ~~g~id~lVn~AG~ 169 (173)
+.+|++|.+.|.
T Consensus 253 --~g~d~vid~~g~ 264 (365)
T cd08277 253 --GGVDYSFECTGN 264 (365)
T ss_pred --CCCCEEEECCCC
Confidence 468999998773
No 453
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=95.75 E-value=0.042 Score=37.62 Aligned_cols=66 Identities=24% Similarity=0.271 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcC--CccEEEEccc
Q 030706 91 GIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLK--YVDIWVFMSD 168 (173)
Q Consensus 91 gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id~lVn~AG 168 (173)
|||...+..+...|++|+++++++++.+.. ++ .+. .. .+|..+.+ +.+++.+..+ ++|++|.++|
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~----~~-~Ga---~~-~~~~~~~~----~~~~i~~~~~~~~~d~vid~~g 67 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELA----KE-LGA---DH-VIDYSDDD----FVEQIRELTGGRGVDVVIDCVG 67 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHH----HH-TTE---SE-EEETTTSS----HHHHHHHHTTTSSEEEEEESSS
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHH----Hh-hcc---cc-cccccccc----cccccccccccccceEEEEecC
Confidence 689888888888899999999988764332 22 232 11 24555544 3334444333 6999999998
Q ss_pred C
Q 030706 169 L 169 (173)
Q Consensus 169 ~ 169 (173)
.
T Consensus 68 ~ 68 (130)
T PF00107_consen 68 S 68 (130)
T ss_dssp S
T ss_pred c
Confidence 3
No 454
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.75 E-value=0.07 Score=41.11 Aligned_cols=41 Identities=27% Similarity=0.364 Sum_probs=35.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV 121 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~ 121 (173)
+.|+.+|=.|++|| .+++.|++.|++|+.+|-+++..+...
T Consensus 58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak 98 (243)
T COG2227 58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAK 98 (243)
T ss_pred CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHH
Confidence 78999999999998 588999999999999999887765543
No 455
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.74 E-value=0.13 Score=38.87 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=31.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~ 114 (173)
++||.++|.|| |.+|..-++.|++.|++|++++...
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~ 42 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEEL 42 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 67899999986 5789999999999999999998754
No 456
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=95.72 E-value=0.096 Score=41.87 Aligned_cols=40 Identities=25% Similarity=0.295 Sum_probs=34.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 118 (173)
.+.+++|.|+++++|.+++..+...|.+|+++.++++..+
T Consensus 165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 204 (341)
T cd08297 165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE 204 (341)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 5789999999999999999988889999999988876543
No 457
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=95.71 E-value=0.17 Score=42.01 Aligned_cols=81 Identities=20% Similarity=0.176 Sum_probs=52.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+...+++|.|+ ||+|..+++.|+..| .++.++|.+. .+.+...+.+.+..+..++..+.
T Consensus 40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~ 118 (392)
T PRK07878 40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE 118 (392)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence 56678888875 699999999999999 4788887531 12333455555555554565555
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
..++.. ...+++ ...|+||.+.
T Consensus 119 ~~i~~~-~~~~~~-------~~~D~Vvd~~ 140 (392)
T PRK07878 119 FRLDPS-NAVELF-------SQYDLILDGT 140 (392)
T ss_pred ccCChh-HHHHHH-------hcCCEEEECC
Confidence 555432 222222 3578888764
No 458
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=95.70 E-value=0.2 Score=40.58 Aligned_cols=88 Identities=16% Similarity=0.169 Sum_probs=53.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH---HHHHHHhCCceEEEEEeeCCCHHHHHHHH-HH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAV---QSLREEFGEQHVWGTKCDVSEGNEVADLV-AF 152 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~-~~ 152 (173)
.+.|+++.|.|. |.||+++++.|...|.+|++.+++........ ..+........+..+.+-.+. +...++ ++
T Consensus 143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~--~t~~li~~~ 219 (330)
T PRK12480 143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK--ESYHLFDKA 219 (330)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH--HHHHHHhHH
Confidence 478999999975 68999999999999999999998764332211 122222233346665555443 233444 33
Q ss_pred HHHhcCCccEEEEccc
Q 030706 153 AQKNLKYVDIWVFMSD 168 (173)
Q Consensus 153 ~~~~~g~id~lVn~AG 168 (173)
..+.+. -+.++.|+|
T Consensus 220 ~l~~mk-~gavlIN~a 234 (330)
T PRK12480 220 MFDHVK-KGAILVNAA 234 (330)
T ss_pred HHhcCC-CCcEEEEcC
Confidence 444433 344554544
No 459
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=95.70 E-value=0.055 Score=43.59 Aligned_cols=78 Identities=23% Similarity=0.236 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
.+++++|+|+ +++|..++..+...|+ +|+++++++++.+.. .+ .+... ..|..+.+..+.+. +.. ..
T Consensus 172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~----~ga~~----~i~~~~~~~~~~l~-~~~-~~ 239 (351)
T cd08233 172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EE----LGATI----VLDPTEVDVVAEVR-KLT-GG 239 (351)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH----hCCCE----EECCCccCHHHHHH-HHh-CC
Confidence 5789999985 8999999888888898 788888877654322 22 22211 22444433222222 111 11
Q ss_pred CCccEEEEccc
Q 030706 158 KYVDIWVFMSD 168 (173)
Q Consensus 158 g~id~lVn~AG 168 (173)
+.+|++|++.|
T Consensus 240 ~~~d~vid~~g 250 (351)
T cd08233 240 GGVDVSFDCAG 250 (351)
T ss_pred CCCCEEEECCC
Confidence 24999999886
No 460
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.69 E-value=0.037 Score=43.63 Aligned_cols=43 Identities=23% Similarity=0.272 Sum_probs=35.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHH
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQS 123 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~ 123 (173)
++.++|.|+ ||-+++++..|.+.|+ +|++++|+.++.++..+.
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~ 165 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL 165 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 467888885 8999999999999996 699999998877665543
No 461
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=95.68 E-value=0.049 Score=43.70 Aligned_cols=78 Identities=19% Similarity=0.261 Sum_probs=50.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHcC-C-EEEEEecChhhHHHHHHHHHHHhCC-ceEEEEEeeCCCHHHHHHHHHHHHHhcC
Q 030706 82 NVLITGSTKGIGYALAKEFLKAG-D-NVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVSEGNEVADLVAFAQKNLK 158 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G-~-~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 158 (173)
.+.|+|+ |++|.+++..|+.++ . .++++|..++..+-...++...... ..-..+..| .+.+ .+.
T Consensus 2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~-----------~~~ 68 (313)
T COG0039 2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYE-----------DLK 68 (313)
T ss_pred eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChh-----------hhc
Confidence 5788999 999999999998876 4 8999999866655555555432111 001111222 1122 123
Q ss_pred CccEEEEcccCCCC
Q 030706 159 YVDIWVFMSDLHSS 172 (173)
Q Consensus 159 ~id~lVn~AG~~~~ 172 (173)
.-|++|..||+..+
T Consensus 69 ~aDiVvitAG~prK 82 (313)
T COG0039 69 GADIVVITAGVPRK 82 (313)
T ss_pred CCCEEEEeCCCCCC
Confidence 68999999998765
No 462
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=95.66 E-value=0.017 Score=42.61 Aligned_cols=81 Identities=17% Similarity=0.077 Sum_probs=55.1
Q ss_pred CCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHH
Q 030706 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAF 152 (173)
Q Consensus 75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 152 (173)
.+.++.+..+|.|++|-.|..+.+++++.+ .+|+++.|.+...... . ..+....+|....+ +..
T Consensus 13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at--------~-k~v~q~~vDf~Kl~---~~a-- 78 (238)
T KOG4039|consen 13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT--------D-KVVAQVEVDFSKLS---QLA-- 78 (238)
T ss_pred HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc--------c-ceeeeEEechHHHH---HHH--
Confidence 355778899999999999999999999998 5899999875322111 1 13555556654333 322
Q ss_pred HHHhcCCccEEEEcccCCC
Q 030706 153 AQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 153 ~~~~~g~id~lVn~AG~~~ 171 (173)
..+-+.|+++.+-|.+.
T Consensus 79 --~~~qg~dV~FcaLgTTR 95 (238)
T KOG4039|consen 79 --TNEQGPDVLFCALGTTR 95 (238)
T ss_pred --hhhcCCceEEEeecccc
Confidence 23347899998876553
No 463
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3. UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=95.66 E-value=0.17 Score=40.28 Aligned_cols=75 Identities=15% Similarity=0.271 Sum_probs=49.1
Q ss_pred EEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEEeeCCC
Q 030706 83 VLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTKCDVSE 142 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~ 142 (173)
++|.| .||+|-++++.|+..| .++.++|.+. .+.+.+.+.+.+..+..++..+..++.+
T Consensus 2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~ 80 (291)
T cd01488 2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD 80 (291)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence 56776 5799999999999999 5788876531 2334445555555565567777777764
Q ss_pred HHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 143 GNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 143 ~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
.+ .. -+...|++|.+.
T Consensus 81 ~~--~~-------f~~~fdvVi~al 96 (291)
T cd01488 81 KD--EE-------FYRQFNIIICGL 96 (291)
T ss_pred hh--HH-------HhcCCCEEEECC
Confidence 32 11 234688888753
No 464
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=95.63 E-value=0.053 Score=43.49 Aligned_cols=33 Identities=27% Similarity=0.305 Sum_probs=29.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCC--EEEEEecCh
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGD--NVIICSRSA 114 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~--~V~~~~r~~ 114 (173)
++.|+|++|.+|..++..|+..|. .|++++++.
T Consensus 2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 588999999999999999999985 599999954
No 465
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=95.60 E-value=0.15 Score=41.18 Aligned_cols=38 Identities=26% Similarity=0.343 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERV 117 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~ 117 (173)
.+.+++|+| +|++|.+++..+...|+ +|++++++++..
T Consensus 177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~ 215 (361)
T cd08231 177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERL 215 (361)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 678999997 59999999887778898 899888876553
No 466
>PRK14852 hypothetical protein; Provisional
Probab=95.58 E-value=0.15 Score=46.70 Aligned_cols=81 Identities=17% Similarity=0.145 Sum_probs=54.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEecCh-------------------hhHHHHHHHHHHHhCCceEEEEE
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAG-DNVIICSRSA-------------------ERVDSAVQSLREEFGEQHVWGTK 137 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G-~~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~ 137 (173)
+...+|+|.| .||+|..+++.|+..| .++.++|-+. .+.+...+.+.+..+..++..+.
T Consensus 330 L~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~ 408 (989)
T PRK14852 330 LLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP 408 (989)
T ss_pred HhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence 5667889988 5799999999999999 5788876531 23344455566555655677666
Q ss_pred eeCCCHHHHHHHHHHHHHhcCCccEEEEcc
Q 030706 138 CDVSEGNEVADLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 138 ~Dv~~~~~v~~~~~~~~~~~g~id~lVn~A 167 (173)
..++ .+.++++++ .+|+||.+.
T Consensus 409 ~~I~-~en~~~fl~-------~~DiVVDa~ 430 (989)
T PRK14852 409 EGVA-AETIDAFLK-------DVDLLVDGI 430 (989)
T ss_pred cCCC-HHHHHHHhh-------CCCEEEECC
Confidence 6663 344444442 578888754
No 467
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=95.57 E-value=0.093 Score=40.19 Aligned_cols=41 Identities=29% Similarity=0.370 Sum_probs=34.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 118 (173)
..+.+++|.|+++++|..++......|++|+.++++++..+
T Consensus 103 ~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 143 (288)
T smart00829 103 RPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRD 143 (288)
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 35778999999999999998877778999999988776544
No 468
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=95.55 E-value=0.04 Score=39.65 Aligned_cols=40 Identities=30% Similarity=0.432 Sum_probs=32.6
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 030706 83 VLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSL 124 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 124 (173)
++++|+.+-+|+++|..|.++|.+|+++ +.+..+.+..++
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~ 40 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEA 40 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHc
Confidence 5789999999999999999999999998 444555555444
No 469
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=95.54 E-value=0.14 Score=42.20 Aligned_cols=39 Identities=31% Similarity=0.379 Sum_probs=32.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~ 116 (173)
..+.+++|+|+++++|.+++..+...|++++++.++.+.
T Consensus 188 ~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~ 226 (398)
T TIGR01751 188 KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEK 226 (398)
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHH
Confidence 356899999999999999988888889998888776654
No 470
>PLN02602 lactate dehydrogenase
Probab=95.53 E-value=0.17 Score=41.30 Aligned_cols=77 Identities=12% Similarity=0.191 Sum_probs=52.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhCC-ceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFGE-QHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.+.|+|+ |.+|..++..|+..| ..++++|.+++.++....++.....- .... +.. -.|.++ +
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~-~~dy~~-----------~ 103 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILA-STDYAV-----------T 103 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEe-CCCHHH-----------h
Confidence 58899996 899999999999887 47999999887776666666653211 0111 111 112221 2
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
..-|++|..||...
T Consensus 104 ~daDiVVitAG~~~ 117 (350)
T PLN02602 104 AGSDLCIVTAGARQ 117 (350)
T ss_pred CCCCEEEECCCCCC
Confidence 36899999999854
No 471
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=95.52 E-value=0.059 Score=39.13 Aligned_cols=42 Identities=21% Similarity=0.321 Sum_probs=31.5
Q ss_pred CCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706 75 EPMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (173)
Q Consensus 75 ~~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~ 117 (173)
..++.||+++|.|- |.+|+.+|+.|...|++|++++.++-..
T Consensus 18 ~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~a 59 (162)
T PF00670_consen 18 NLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRA 59 (162)
T ss_dssp -S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH
T ss_pred ceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHH
Confidence 35689999999984 6899999999999999999999987543
No 472
>PRK06487 glycerate dehydrogenase; Provisional
Probab=95.50 E-value=0.06 Score=43.36 Aligned_cols=36 Identities=22% Similarity=0.153 Sum_probs=32.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~ 113 (173)
.+.||++.|.|- |.||+++++.+...|.+|+..++.
T Consensus 145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~ 180 (317)
T PRK06487 145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP 180 (317)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence 488999999986 799999999999999999988875
No 473
>PLN03139 formate dehydrogenase; Provisional
Probab=95.49 E-value=0.17 Score=41.90 Aligned_cols=88 Identities=14% Similarity=0.005 Sum_probs=53.1
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-------HHHHHHHhCCceEEEEEeeCCCHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSA-------VQSLREEFGEQHVWGTKCDVSEGNEVAD 148 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-------~~~l~~~~~~~~~~~~~~Dv~~~~~v~~ 148 (173)
..+.||++.|.| .|.||+.+++.|...|.+|+..++.....+.. ...+.+......+..+.+ -..++.+.
T Consensus 195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~l--Plt~~T~~ 271 (386)
T PLN03139 195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINT--PLTEKTRG 271 (386)
T ss_pred cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeC--CCCHHHHH
Confidence 458999999999 57899999999999999999988764211110 112222222223444443 44445666
Q ss_pred HHHH-HHHhcCCccEEEEc
Q 030706 149 LVAF-AQKNLKYVDIWVFM 166 (173)
Q Consensus 149 ~~~~-~~~~~g~id~lVn~ 166 (173)
++++ ..+.+.+=-+|||.
T Consensus 272 li~~~~l~~mk~ga~lIN~ 290 (386)
T PLN03139 272 MFNKERIAKMKKGVLIVNN 290 (386)
T ss_pred HhCHHHHhhCCCCeEEEEC
Confidence 6643 44444433445554
No 474
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.49 E-value=0.092 Score=41.90 Aligned_cols=38 Identities=26% Similarity=0.399 Sum_probs=34.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-cCh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICS-RSA 114 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~-r~~ 114 (173)
.+.||+++|.|.++-+|+.++..|.+.|++|++++ |+.
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 47899999999999999999999999999999995 654
No 475
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=95.48 E-value=0.16 Score=41.62 Aligned_cols=41 Identities=32% Similarity=0.401 Sum_probs=34.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 118 (173)
..+.+++|+|++|++|.+++..+...|++++++++++++.+
T Consensus 192 ~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~ 232 (393)
T cd08246 192 KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAE 232 (393)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence 34779999999999999998888788999888887766543
No 476
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=95.47 E-value=0.14 Score=40.86 Aligned_cols=39 Identities=26% Similarity=0.359 Sum_probs=32.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD 118 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 118 (173)
.+.+++|.| ++++|.+++..+...|++|+++++++++.+
T Consensus 163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~ 201 (333)
T cd08296 163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKAD 201 (333)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence 578999999 799999988888888999999988766543
No 477
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.43 E-value=0.085 Score=41.73 Aligned_cols=42 Identities=24% Similarity=0.359 Sum_probs=34.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 122 (173)
-+.+.|.|+ |.+|..++..|+..|++|++.+++++..+...+
T Consensus 4 ~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 45 (292)
T PRK07530 4 IKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLA 45 (292)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 356777775 789999999999999999999999877665443
No 478
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.42 E-value=0.036 Score=40.20 Aligned_cols=43 Identities=26% Similarity=0.438 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 119 (173)
.+.||+++|.|.+.-+|+-++..|.++|++|.++......+++
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~ 75 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE 75 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence 3889999999999999999999999999999999876555443
No 479
>PRK06223 malate dehydrogenase; Reviewed
Probab=95.42 E-value=0.18 Score=40.13 Aligned_cols=43 Identities=14% Similarity=0.171 Sum_probs=33.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHH
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGD-NVIICSRSAERVDSAVQSL 124 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l 124 (173)
+.+.|.|+ |.+|..++..++..|. +|+++|++++..+....++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl 46 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDI 46 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHH
Confidence 46888898 8899999999998874 9999999877655443333
No 480
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.42 E-value=0.21 Score=40.02 Aligned_cols=74 Identities=11% Similarity=0.162 Sum_probs=51.2
Q ss_pred EEEEcCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHHHHhC---CceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 83 VLITGSTKGIGYALAKEFLKAG--DNVIICSRSAERVDSAVQSLREEFG---EQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 83 ~lItGa~~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
+.|.|+ |.+|..+|..|+..| .+++++|.+++..+....+|..... ..++.... .|.+ .+
T Consensus 2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~-----------~~ 66 (307)
T cd05290 2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYD-----------DC 66 (307)
T ss_pred EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHH-----------Hh
Confidence 567787 999999999999887 3799999988777666666665322 11233322 2322 22
Q ss_pred CCccEEEEcccCCC
Q 030706 158 KYVDIWVFMSDLHS 171 (173)
Q Consensus 158 g~id~lVn~AG~~~ 171 (173)
..-|++|..||...
T Consensus 67 ~~aDivvitaG~~~ 80 (307)
T cd05290 67 ADADIIVITAGPSI 80 (307)
T ss_pred CCCCEEEECCCCCC
Confidence 37899999999854
No 481
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=95.40 E-value=0.056 Score=43.09 Aligned_cols=78 Identities=18% Similarity=0.225 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLK-AGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
.|.+++|++|+|..|. ++-++++ .|++|+.+.-.+++.+-..+++ +.+. -.|...+ ++.+. +.+..
T Consensus 150 ~GetvvVSaAaGaVGs-vvgQiAKlkG~rVVGiaGg~eK~~~l~~~l----GfD~----~idyk~~-d~~~~---L~~a~ 216 (340)
T COG2130 150 AGETVVVSAAAGAVGS-VVGQIAKLKGCRVVGIAGGAEKCDFLTEEL----GFDA----GIDYKAE-DFAQA---LKEAC 216 (340)
T ss_pred CCCEEEEEecccccch-HHHHHHHhhCCeEEEecCCHHHHHHHHHhc----CCce----eeecCcc-cHHHH---HHHHC
Confidence 5899999999999995 6667776 5899999888776654433332 3211 2355444 23333 33333
Q ss_pred -CCccEEEEcccC
Q 030706 158 -KYVDIWVFMSDL 169 (173)
Q Consensus 158 -g~id~lVn~AG~ 169 (173)
..||+.+-|.|-
T Consensus 217 P~GIDvyfeNVGg 229 (340)
T COG2130 217 PKGIDVYFENVGG 229 (340)
T ss_pred CCCeEEEEEcCCc
Confidence 479999998873
No 482
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.40 E-value=0.024 Score=37.86 Aligned_cols=37 Identities=27% Similarity=0.317 Sum_probs=31.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecCh
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSA 114 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~ 114 (173)
.+++|.++|.|| |.+|..-++.|++.|++|++++...
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 378999999998 7899999999999999999999874
No 483
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=95.40 E-value=0.13 Score=41.18 Aligned_cols=36 Identities=31% Similarity=0.388 Sum_probs=31.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~ 113 (173)
..+.+++|.|+++++|.+++..+...|++|+.+..+
T Consensus 176 ~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~ 211 (350)
T cd08274 176 GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGA 211 (350)
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCc
Confidence 357899999999999999988888889998888754
No 484
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.38 E-value=0.068 Score=34.74 Aligned_cols=40 Identities=35% Similarity=0.497 Sum_probs=32.0
Q ss_pred EEEcCCchHHHHHHHHHHHcC---CEEEEE-ecChhhHHHHHHHH
Q 030706 84 LITGSTKGIGYALAKEFLKAG---DNVIIC-SRSAERVDSAVQSL 124 (173)
Q Consensus 84 lItGa~~gIG~aia~~l~~~G---~~V~~~-~r~~~~~~~~~~~l 124 (173)
.|. |.|.+|.++++.|.+.| .+|++. +|++++.++..+++
T Consensus 3 ~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~ 46 (96)
T PF03807_consen 3 GII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY 46 (96)
T ss_dssp EEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred EEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence 344 67899999999999999 899955 89988877665543
No 485
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.36 E-value=0.068 Score=43.17 Aligned_cols=77 Identities=13% Similarity=0.094 Sum_probs=48.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCC-------EEEEEecChhh--HHHHHHHHHHHh-CC-ceEEEEEeeCCCHHHHHHH
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGD-------NVIICSRSAER--VDSAVQSLREEF-GE-QHVWGTKCDVSEGNEVADL 149 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~-------~V~~~~r~~~~--~~~~~~~l~~~~-~~-~~~~~~~~Dv~~~~~v~~~ 149 (173)
+.+.|+|++|.+|..++..|+..|. .++++|.++.. ++....++.... .. .++.. .-.+
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i---~~~~------- 72 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI---TDDP------- 72 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE---ecCc-------
Confidence 4789999999999999999998873 69999985432 333333443321 00 01111 1111
Q ss_pred HHHHHHhcCCccEEEEcccCCC
Q 030706 150 VAFAQKNLKYVDIWVFMSDLHS 171 (173)
Q Consensus 150 ~~~~~~~~g~id~lVn~AG~~~ 171 (173)
.+.+..-|++|..||...
T Consensus 73 ----~~~~~daDivvitaG~~~ 90 (322)
T cd01338 73 ----NVAFKDADWALLVGAKPR 90 (322)
T ss_pred ----HHHhCCCCEEEEeCCCCC
Confidence 122347899999999854
No 486
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.35 E-value=0.17 Score=40.64 Aligned_cols=89 Identities=15% Similarity=0.088 Sum_probs=52.9
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHH---HH--HHHHHHHhCCceEEEEEeeCCCHHHHHHHH
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVD---SA--VQSLREEFGEQHVWGTKCDVSEGNEVADLV 150 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~--~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~ 150 (173)
..+.||++.|.| .|.||+.+++.|...|.+|+..++..+... .. ..++.+......+..+.+-.+ ++.+.++
T Consensus 132 ~~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt--~~T~~li 208 (312)
T PRK15469 132 YHREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNT--PETVGII 208 (312)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCC--HHHHHHh
Confidence 347899999997 478999999999999999999987643211 00 112322223234555544443 3456665
Q ss_pred HH-HHHhcCCccEEEEccc
Q 030706 151 AF-AQKNLKYVDIWVFMSD 168 (173)
Q Consensus 151 ~~-~~~~~g~id~lVn~AG 168 (173)
.+ ..+.+.+ +.++.|.|
T Consensus 209 ~~~~l~~mk~-ga~lIN~a 226 (312)
T PRK15469 209 NQQLLEQLPD-GAYLLNLA 226 (312)
T ss_pred HHHHHhcCCC-CcEEEECC
Confidence 43 4444433 44444444
No 487
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.32 E-value=0.17 Score=42.97 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=33.1
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChh
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAE 115 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~ 115 (173)
..+.+|.++|.| .||.|+++++.|.+.|+.|.+.+++..
T Consensus 11 ~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~ 49 (473)
T PRK00141 11 PQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNET 49 (473)
T ss_pred ccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChH
Confidence 346678899998 678999999999999999999997654
No 488
>PRK14968 putative methyltransferase; Provisional
Probab=95.28 E-value=0.16 Score=36.95 Aligned_cols=78 Identities=21% Similarity=0.146 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCce-EEEEEeeCCCHHHHHHHHHHHHHhc
Q 030706 79 PPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQH-VWGTKCDVSEGNEVADLVAFAQKNL 157 (173)
Q Consensus 79 ~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~~ 157 (173)
.++.+|-.|++.|. ++..++..+.+|+.++.+++..+...+.+.......+ +.++.+|+.+. ..+
T Consensus 23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~-- 88 (188)
T PRK14968 23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG-- 88 (188)
T ss_pred CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc--
Confidence 56778888866554 3444455588999999998777666555544322212 77777776432 111
Q ss_pred CCccEEEEcccCC
Q 030706 158 KYVDIWVFMSDLH 170 (173)
Q Consensus 158 g~id~lVn~AG~~ 170 (173)
+.+|.++.|..+.
T Consensus 89 ~~~d~vi~n~p~~ 101 (188)
T PRK14968 89 DKFDVILFNPPYL 101 (188)
T ss_pred cCceEEEECCCcC
Confidence 2689999886543
No 489
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=95.27 E-value=0.19 Score=41.37 Aligned_cols=71 Identities=21% Similarity=0.242 Sum_probs=48.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCC
Q 030706 80 PYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKY 159 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 159 (173)
.|+++|+|++ .+|+.+++.+.+.|++|++++.++...... + .. .++..|..|.+.+.+++++ ..
T Consensus 12 ~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~----ad---~~~~~~~~d~~~l~~~~~~-----~~ 75 (395)
T PRK09288 12 ATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---V----AH---RSHVIDMLDGDALRAVIER-----EK 75 (395)
T ss_pred CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---h----hh---heEECCCCCHHHHHHHHHH-----hC
Confidence 4689999875 689999999999999999999876432111 1 11 1345677787776666543 25
Q ss_pred ccEEEEc
Q 030706 160 VDIWVFM 166 (173)
Q Consensus 160 id~lVn~ 166 (173)
+|+++..
T Consensus 76 id~vi~~ 82 (395)
T PRK09288 76 PDYIVPE 82 (395)
T ss_pred CCEEEEe
Confidence 8887753
No 490
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=95.26 E-value=0.14 Score=40.70 Aligned_cols=87 Identities=18% Similarity=0.244 Sum_probs=53.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEe--cChhh---------HHHHHHHHHHHhCCceEEEEEeeCCCHHHHH
Q 030706 80 PYNVLITGSTKGIGYALAKEFLK-AGDNVIICS--RSAER---------VDSAVQSLREEFGEQHVWGTKCDVSEGNEVA 147 (173)
Q Consensus 80 ~k~~lItGa~~gIG~aia~~l~~-~G~~V~~~~--r~~~~---------~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~ 147 (173)
.|.+||.|+++|.|++.--..+= .|+.-+.+. |.... -.....+..+..+- -..-+..|.-+.+.-+
T Consensus 41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGl-yAksingDaFS~e~k~ 119 (398)
T COG3007 41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGL-YAKSINGDAFSDEMKQ 119 (398)
T ss_pred CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCc-eeeecccchhhHHHHH
Confidence 48899999999999875333322 345444332 21110 01122223222221 3445677887777778
Q ss_pred HHHHHHHHhcCCccEEEEcc
Q 030706 148 DLVAFAQKNLKYVDIWVFMS 167 (173)
Q Consensus 148 ~~~~~~~~~~g~id~lVn~A 167 (173)
.+++.+++.+|.+|.+|+.-
T Consensus 120 kvIe~Ik~~~g~vDlvvYSl 139 (398)
T COG3007 120 KVIEAIKQDFGKVDLVVYSL 139 (398)
T ss_pred HHHHHHHHhhccccEEEEec
Confidence 89999999999999999863
No 491
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=95.20 E-value=0.62 Score=37.04 Aligned_cols=85 Identities=15% Similarity=0.182 Sum_probs=54.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH----------HHHHhCCceEEEEEeeCCCHHHHHHHHH
Q 030706 82 NVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQS----------LREEFGEQHVWGTKCDVSEGNEVADLVA 151 (173)
Q Consensus 82 ~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----------l~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 151 (173)
++-|.| .|-+|.++++.|++.|++|++.+|+++..+...+. +.......++.++ =+.+. .++.+++
T Consensus 2 ~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~--~vp~~-~~~~v~~ 77 (298)
T TIGR00872 2 QLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWV--MVPHG-IVDAVLE 77 (298)
T ss_pred EEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEE--EcCch-HHHHHHH
Confidence 355666 57899999999999999999999998776554331 1111111123333 24444 7788888
Q ss_pred HHHHhcCCccEEEEcccCC
Q 030706 152 FAQKNLKYVDIWVFMSDLH 170 (173)
Q Consensus 152 ~~~~~~g~id~lVn~AG~~ 170 (173)
++.....+=+++|++....
T Consensus 78 ~l~~~l~~g~ivid~st~~ 96 (298)
T TIGR00872 78 ELAPTLEKGDIVIDGGNSY 96 (298)
T ss_pred HHHhhCCCCCEEEECCCCC
Confidence 8776654447788765543
No 492
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=95.18 E-value=0.11 Score=41.81 Aligned_cols=66 Identities=21% Similarity=0.170 Sum_probs=44.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH--HHHHHHHHhCCceEEEEEeeCCCH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS--AVQSLREEFGEQHVWGTKCDVSEG 143 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dv~~~ 143 (173)
.+.||++.|.|- |.||+++|+.+...|.+|+..++.....+. ....+.+......+..+.+-++++
T Consensus 142 ~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~ 209 (311)
T PRK08410 142 EIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEK 209 (311)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCch
Confidence 588999999985 799999999999999999999875321110 011222222223566666666654
No 493
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=95.18 E-value=0.21 Score=38.12 Aligned_cols=40 Identities=25% Similarity=0.257 Sum_probs=33.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~ 117 (173)
..|.+++|.|+++++|..++......|.+|+.+.++.+..
T Consensus 107 ~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~ 146 (293)
T cd05195 107 QKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKR 146 (293)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 3578999999999999998887777899999988876543
No 494
>PLN02494 adenosylhomocysteinase
Probab=95.17 E-value=0.18 Score=42.81 Aligned_cols=40 Identities=23% Similarity=0.245 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 030706 76 PMLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAER 116 (173)
Q Consensus 76 ~~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~ 116 (173)
.++.||+++|.|.+ .||+.+++.+...|++|+++++++..
T Consensus 250 i~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r 289 (477)
T PLN02494 250 VMIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPIC 289 (477)
T ss_pred CccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 34789999999864 89999999999999999999987654
No 495
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=95.16 E-value=0.14 Score=40.65 Aligned_cols=40 Identities=20% Similarity=0.249 Sum_probs=33.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~ 117 (173)
..+.+++|.|+.+.+|.+++......|++|+.+.++.++.
T Consensus 139 ~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~ 178 (327)
T PRK10754 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKA 178 (327)
T ss_pred CCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 3578999999999999999887778899999888776553
No 496
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.14 E-value=0.095 Score=41.56 Aligned_cols=41 Identities=27% Similarity=0.438 Sum_probs=35.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERV 117 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~ 117 (173)
.+.||+++|.|.+.-+|+-++..|..+|++|.++......+
T Consensus 154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l 194 (285)
T PRK14191 154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDL 194 (285)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHH
Confidence 47899999999999999999999999999999887654433
No 497
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.13 E-value=0.68 Score=36.54 Aligned_cols=41 Identities=27% Similarity=0.284 Sum_probs=33.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 030706 81 YNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDSAVQ 122 (173)
Q Consensus 81 k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 122 (173)
+++.|.|+ |-+|.+++..|+..|++|++.+++++..++..+
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKE 44 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 45677775 789999999999999999999999876655543
No 498
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=95.13 E-value=0.39 Score=35.09 Aligned_cols=73 Identities=15% Similarity=0.166 Sum_probs=45.9
Q ss_pred HHHHHHHHHcCCEEEEEecChhhHHHHHHHHHHHhCCceEEEEEeeCCCHHHHHHHHHHHHHhcCCccEEEEccc
Q 030706 94 YALAKEFLKAGDNVIICSRSAERVDSAVQSLREEFGEQHVWGTKCDVSEGNEVADLVAFAQKNLKYVDIWVFMSD 168 (173)
Q Consensus 94 ~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lVn~AG 168 (173)
..+.....+.+.+|++++-+++..++..+.+.+.+++-++.....-.-++++.+++++.+.+. +.|+|+.+-|
T Consensus 38 ~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~--~pdiv~vglG 110 (172)
T PF03808_consen 38 PDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINAS--GPDIVFVGLG 110 (172)
T ss_pred HHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHc--CCCEEEEECC
Confidence 344445555677888888777777777777777776644443222112666667777776654 5677776544
No 499
>PLN02928 oxidoreductase family protein
Probab=95.13 E-value=0.13 Score=41.87 Aligned_cols=36 Identities=33% Similarity=0.371 Sum_probs=33.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecC
Q 030706 77 MLPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRS 113 (173)
Q Consensus 77 ~~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~ 113 (173)
.+.||++.|.|. |.||+.+++.|...|.+|+..+|+
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~ 191 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRS 191 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence 488999999986 799999999999999999999886
No 500
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=95.11 E-value=0.17 Score=40.47 Aligned_cols=41 Identities=20% Similarity=0.271 Sum_probs=33.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 030706 78 LPPYNVLITGSTKGIGYALAKEFLKAGDNVIICSRSAERVDS 119 (173)
Q Consensus 78 ~~~k~~lItGa~~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 119 (173)
..+++++|.| .+++|..++..+...|.+|+++.++.+..+.
T Consensus 164 ~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~ 204 (345)
T cd08260 164 KPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLEL 204 (345)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence 3578999999 6899999988888889999999887665433
Done!