Your job contains 1 sequence.
>030707
MGSQVLPQALHWIPRSSTQCIPSKRLGFSTVLSRGPFVSHGVSVSAKPIGWNLGFFVNAQ
VKDSFVVRAEANEEAEANESIEEEQNEAVQAQGDVVVAVEAESEDKVEEEEVKAPRKPRV
KLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLVNAVFDYLYNVLCYSFK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030707
(173 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2129186 - symbol:AT4G17560 species:3702 "Arabi... 168 3.9e-24 2
TAIR|locus:2171609 - symbol:AT5G47190 species:3702 "Arabi... 159 6.6e-21 2
>TAIR|locus:2129186 [details] [associations]
symbol:AT4G17560 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 PROSITE:PS01015
GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
GO:GO:0006412 GO:GO:0009941 GO:GO:0005840 GO:GO:0003735 EMBL:Z97343
GO:GO:0019843 EMBL:AL161546 InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG0335 PANTHER:PTHR15680 EMBL:AY062821 EMBL:AY081625
EMBL:AY086121 IPI:IPI00545108 PIR:C71445 RefSeq:NP_567531.1
UniGene:At.27419 ProteinModelPortal:Q8W463 SMR:Q8W463 STRING:Q8W463
PaxDb:Q8W463 PRIDE:Q8W463 EnsemblPlants:AT4G17560.1 GeneID:827471
KEGG:ath:AT4G17560 TAIR:At4g17560 HOGENOM:HOG000016266
InParanoid:Q8W463 OMA:VHTTIRV PhylomeDB:Q8W463
ProtClustDB:CLSN2689487 Genevestigator:Q8W463 GermOnline:AT4G17560
TIGRFAMs:TIGR01024 Uniprot:Q8W463
Length = 225
Score = 168 (64.2 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 29/41 (70%), Positives = 38/41 (92%)
Query: 116 RKPRVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKL 156
RKPR+KLGD+MGILN++A+E +E RP+P+IRTGD+VEIKL
Sbjct: 105 RKPRIKLGDVMGILNQKAIEVAEKVRPVPEIRTGDIVEIKL 145
Score = 123 (48.4 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 6 LPQALHWIPRSSTQCIPSKRLGFSTVLSRGPFVSHGVSVSAKPI---GWNLGFFVNAQVK 62
LPQALH IPR+ TQ SK LGFS+ LS P + +SVS + G GF ++ +V+
Sbjct: 8 LPQALHMIPRNPTQS--SKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVR 65
Query: 63 DSFVVR 68
+ F+VR
Sbjct: 66 NEFIVR 71
>TAIR|locus:2171609 [details] [associations]
symbol:AT5G47190 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 PROSITE:PS01015
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0016020
GO:GO:0006412 GO:GO:0009941 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 EMBL:AB018117 InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG0335 PANTHER:PTHR15680 HOGENOM:HOG000016266
ProtClustDB:CLSN2689487 TIGRFAMs:TIGR01024 EMBL:AY080626
EMBL:AY117181 EMBL:AY086970 IPI:IPI00525994 RefSeq:NP_568677.1
UniGene:At.29908 ProteinModelPortal:Q8RXX5 SMR:Q8RXX5 STRING:Q8RXX5
PaxDb:Q8RXX5 PRIDE:Q8RXX5 EnsemblPlants:AT5G47190.1 GeneID:834765
KEGG:ath:AT5G47190 GeneFarm:194 TAIR:At5g47190 InParanoid:Q8RXX5
OMA:DIMGLLN PhylomeDB:Q8RXX5 Genevestigator:Q8RXX5
GermOnline:AT5G47190 Uniprot:Q8RXX5
Length = 229
Score = 159 (61.0 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 29/42 (69%), Positives = 37/42 (88%)
Query: 115 PRKPRVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKL 156
P K RVKLGDIMG+LNK+A+E +E+ RP+P +RTGD+VEIKL
Sbjct: 108 PWKTRVKLGDIMGLLNKKAIEVAETVRPVPGLRTGDIVEIKL 149
Score = 101 (40.6 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 3 SQVLPQALHWIPRSSTQCIPSKRLGFSTVLSRGPFVSHGVSVSAKPIGW---NLGFFVNA 59
S +LPQALH IPR T SK LG S++L R V+ +SVS + N GF +++
Sbjct: 5 SHLLPQALHMIPR--TPSFSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFAIDS 62
Query: 60 QVKDSFVVR 68
+ + F+ +
Sbjct: 63 KKRKEFIAK 71
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 173 128 0.00091 102 3 11 22 0.36 31
29 0.41 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 570 (61 KB)
Total size of DFA: 123 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.81u 0.12s 9.93t Elapsed: 00:00:00
Total cpu time: 9.81u 0.12s 9.93t Elapsed: 00:00:00
Start: Thu May 9 17:13:27 2013 End: Thu May 9 17:13:27 2013