BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030710
(173 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6Q2C2|HYES_PIG Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1
Length = 555
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 11 LQEPGVAEEDFAQIDTARLIKKFLGGRSPK--PPCVPKEIG--FRGLPDLRTLPSWLSEE 66
QEPGVAE + Q + R K F +E+G F G P+ +L ++EE
Sbjct: 387 FQEPGVAEAELEQ-NLDRTFKNFFRAHDETFLTTNRVRELGGLFVGTPEEPSLSRLVTEE 445
Query: 67 DVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIR 126
D+ +Y +F + GF G LN+YR ++ NW+ +G +I IP + + D+ H P +
Sbjct: 446 DIQFYVQQFKKSGFRGPLNWYRNMERNWQWGCKGSGRKILIPALMVTAENDLVLH-PKMS 504
Query: 127 EYIQN 131
++++N
Sbjct: 505 KHMEN 509
>sp|P34913|HYES_HUMAN Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2
Length = 555
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 11 LQEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGL----PDLRTLPSWLSEE 66
QEPGVAE + Q + +R K + K GL P+ +L ++EE
Sbjct: 387 FQEPGVAEAELEQ-NLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEE 445
Query: 67 DVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIR 126
++ +Y +F + GF G LN+YR ++ NW+ G +I IP + + D +P +
Sbjct: 446 EIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVL-VPQMS 504
Query: 127 EYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFI 170
+++++ +P L+ + E H+ +K EV+ + ++
Sbjct: 505 QHMEDW-----IPHLKRGHI-EDCGHWTQMDKPTEVNQILIKWL 542
>sp|P80299|HYES_RAT Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1
SV=1
Length = 554
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 11 LQEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCV---PKEIG--FRGLPDLRTLPSWLSE 65
QEPGVAE + + + +R K F E+G G P+ + +E
Sbjct: 385 FQEPGVAEAELEK-NMSRTFKSFFRTSDDMGLLTVNKATEMGGILVGTPEDPKVSKITTE 443
Query: 66 EDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGI 125
E++ YY +F + GF G LN+YR + NW+ G +I +P + + DI P +
Sbjct: 444 EEIEYYIQQFKKSGFRGPLNWYRNTERNWKWSCKALGRKILVPALMVTAEKDIVLR-PEM 502
Query: 126 REYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIK 171
+ ++N +P L+ + E H+ EK EV+ + ++K
Sbjct: 503 SKNMENW-----IPFLKRGHI-EDCGHWTQIEKPAEVNQILIKWLK 542
>sp|P34914|HYES_MOUSE Bifunctional epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2
Length = 554
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 11 LQEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCV---PKEIG--FRGLPDLRTLPSWLSE 65
QEPGVAE + + + +R K F EIG P+ L +E
Sbjct: 385 FQEPGVAEAELEK-NMSRTFKSFFRASDETGFIAVHKATEIGGILVNTPEDPNLSKITTE 443
Query: 66 EDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGI 125
E++ +Y +F + GF G LN+YR + NW+ G +I +P + + DI
Sbjct: 444 EEIEFYIQQFKKTGFRGPLNWYRNTERNWKWSCKGLGRKILVPALMVTAEKDIVLR---- 499
Query: 126 REYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIK 171
E +N +K +P L+ + E H+ EK EV+ + +++
Sbjct: 500 PEMSKN--MEKWIPFLKRGHI-EDCGHWTQIEKPTEVNQILIKWLQ 542
>sp|Q9H6B9|EPHX3_HUMAN Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 SV=1
Length = 360
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 63 LSEEDVNYYASKFSQKG-FTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDITYH 121
L+ ++ + FSQ G TG LNYYR L N+ P ++ P + G+ D TY
Sbjct: 256 LTPSELEAFLYNFSQPGGLTGPLNYYRNLFRNF----PLEPQELTTPTLLLWGEKD-TYL 310
Query: 122 IPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIK 171
G+ E I + + VPG E ++ G+ H+I Q E+ +++ F++
Sbjct: 311 ELGLVEAIGS----RFVPGRLEAHILPGIGHWIPQSNPQEMHQYMWAFLQ 356
>sp|Q3V1F8|EPHX3_MOUSE Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 SV=2
Length = 367
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 63 LSEEDVNYYASKFSQKG-FTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDITYH 121
L+ ++ + FSQ G TG +NYYR + N+ P ++ P + G+ D +
Sbjct: 263 LTPSELEAFLYHFSQPGCLTGPINYYRNVFRNF----PLEPKKLSTPTLLLWGEKDFAFQ 318
Query: 122 IPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIK 171
G+ E I + VPG E ++ G H+I Q E+ +++ F++
Sbjct: 319 -QGLVEAIG----RHFVPGRLESHILPGSGHWIPQSHPQEMHQYMWAFLQ 363
>sp|Q0IIS3|EPHX3_XENTR Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1
Length = 367
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 63 LSEEDVNYYASKFSQKG-FTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDI--- 118
LS+E+V + SQKG T LNYYR N P + +P + G+ D
Sbjct: 260 LSKEEVEAFVYYPSQKGALTPPLNYYR----NLFGFFPVKAQDVLVPTLLLWGEHDAFLE 315
Query: 119 TYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 172
+P +++Y++ P E+I +H++ Q++ EV+ I DF+K+
Sbjct: 316 AAMVPEMQQYVR-------APFRAEII--PNASHWLQQDRPQEVNKIIRDFLKE 360
>sp|P46298|RS13_PEA 40S ribosomal protein S13 OS=Pisum sativum GN=RPS13 PE=2 SV=1
Length = 151
Score = 33.5 bits (75), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 46 KEIGFRGLPDLRTLPSWL--SEEDVNYYASKFSQKGFT 81
K I LP RT PSWL S +DV+ KF++KG T
Sbjct: 9 KGISSSALPYRRTAPSWLKISSQDVDETICKFAKKGLT 46
>sp|Q8IUS5|EPHX4_HUMAN Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2
Length = 362
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 11/111 (9%)
Query: 63 LSEEDVNYYASKFSQKG-FTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDITYH 121
L+ ED+ Y FSQ G +G +N+YR N P + P + G+ D
Sbjct: 256 LTTEDLEAYIYVFSQPGALSGPINHYR----NIFSCLPLKHHMVTTPTLLLWGEND---- 307
Query: 122 IPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 172
E K V + ++ +H++ Q++ D V+ I+ F+K+
Sbjct: 308 --AFMEVEMAEVTKIYVKNYFRLTILSEASHWLQQDQPDIVNKLIWTFLKE 356
>sp|P62302|RS13_SOYBN 40S ribosomal protein S13 OS=Glycine max GN=RPS13 PE=2 SV=1
Length = 151
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 46 KEIGFRGLPDLRTLPSWL--SEEDVNYYASKFSQKGFT 81
K I LP RT PSWL S +DV KF++KG T
Sbjct: 9 KGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLT 46
>sp|A8GTV8|XERC_RICRS Tyrosine recombinase XerC OS=Rickettsia rickettsii (strain Sheila
Smith) GN=xerC PE=3 SV=1
Length = 305
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 55 DLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWEL 96
D+R + SWL++ + + +A+ +G + N+YR L+ +L
Sbjct: 59 DIRLIRSWLAKRNCDNFAASSISRGLSAVKNFYRFLEKTTQL 100
>sp|B0BVE6|XERC_RICRO Tyrosine recombinase XerC OS=Rickettsia rickettsii (strain Iowa)
GN=xerC PE=3 SV=1
Length = 305
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 55 DLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWEL 96
D+R + SWL++ + + +A+ +G + N+YR L+ +L
Sbjct: 59 DIRLIRSWLAKRNCDNFAASSISRGLSAVKNFYRFLEKTTQL 100
>sp|Q6IE26|EPHX4_MOUSE Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=2
Length = 359
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 17/114 (14%)
Query: 63 LSEEDVNYYASKFSQKG-FTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDITYH 121
L+ ED+ Y FSQ G +G +N+YR N P + P + G+ D
Sbjct: 254 LTTEDLEAYVYVFSQPGALSGPINHYR----NIFSCLPLKHHMVTTPTLLLWGEEDAFME 309
Query: 122 IPG---IREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 172
+ + Y++N + I+ EG +H++ Q++ D V+ I+ F+K+
Sbjct: 310 VEMAEVTKIYVKNY--------FRLTILSEG-SHWLQQDQPDIVNGLIWAFLKE 354
>sp|Q83928|CAPSD_OCSVU Capsid protein OS=Oat chlorotic stunt virus (isolate United
Kingdom) GN=ORF2 PE=3 SV=1
Length = 454
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 46 KEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFT 81
+ G+R P + T+ WLS VNY KF + FT
Sbjct: 162 RCTGYRANPGMSTIFPWLSATAVNYEKYKFRRLSFT 197
>sp|O67550|EX53_AQUAE 5'-3' exonuclease OS=Aquifex aeolicus (strain VF5) GN=aq_1628 PE=3
SV=1
Length = 289
Score = 30.8 bits (68), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 42 PCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGF 80
P + + + G+P L LP + +++ + Y A KFSQKGF
Sbjct: 88 PVIKEILKLAGIP-LLELPGYEADDVIAYLAEKFSQKGF 125
>sp|A8MJ06|UVRC_ALKOO UvrABC system protein C OS=Alkaliphilus oremlandii (strain OhILAs)
GN=uvrC PE=3 SV=1
Length = 621
Score = 30.4 bits (67), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 17 AEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFR-GLPDLRTLPSWLSEEDVNYYASKF 75
E+D Q A +K+F G + VPKEI + DL L WLS + N + K
Sbjct: 289 TEDDSNQEIIASFLKQFYSGAT----FVPKEILIEESVEDLNVLEEWLSGKRGNKVSIKV 344
Query: 76 SQKG 79
QKG
Sbjct: 345 PQKG 348
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.142 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,477,358
Number of Sequences: 539616
Number of extensions: 3129437
Number of successful extensions: 6133
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 6121
Number of HSP's gapped (non-prelim): 17
length of query: 173
length of database: 191,569,459
effective HSP length: 109
effective length of query: 64
effective length of database: 132,751,315
effective search space: 8496084160
effective search space used: 8496084160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)