BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030711
(173 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C6Z2|NUD25_ARATH Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT25 PE=1 SV=1
Length = 175
Score = 303 bits (775), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 145/175 (82%), Positives = 159/175 (90%), Gaps = 2/175 (1%)
Query: 1 MDGLPSGYRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREET 60
M+ LP GYRPNVGVCLINSD+ +FVASRLNVPGAWQMPQGGIEDGEDPK AAMREL+EET
Sbjct: 1 MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEET 60
Query: 61 GIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDES--EINLAN 118
G+VSAEI++EVPNWLTYDFPPAVK KVNRLWGGEWHGQAQKW+L++L NDE EINLAN
Sbjct: 61 GVVSAEIVSEVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWYLVRLRNDEDEKEINLAN 120
Query: 119 GEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNENGIAAKCKSAKW 173
EAD EFAEWKWA PEEVVEQAVDYKRPTYEEV++TF +LN+ G AAKCKSAKW
Sbjct: 121 NEADSEFAEWKWAKPEEVVEQAVDYKRPTYEEVIKTFGSFLNDTGRAAKCKSAKW 175
>sp|Q9CAF2|NUD26_ARATH Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana GN=NUDT26
PE=1 SV=1
Length = 216
Score = 216 bits (551), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 97/161 (60%), Positives = 124/161 (77%), Gaps = 1/161 (0%)
Query: 1 MDGLPSGYRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREET 60
M+ P GYR NVGVCL+NS +IF ASRL++P AWQMPQGGI++GEDP++A MREL+EET
Sbjct: 56 MESPPEGYRRNVGVCLMNSSKKIFTASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEET 115
Query: 61 GIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEIN-LANG 119
G+ SAEI+AE P+W+TYDFPP V+ K+ WG +W GQAQKWFL+K T + EIN L +G
Sbjct: 116 GVHSAEILAEAPHWITYDFPPDVREKLKVRWGSDWKGQAQKWFLLKFTGKDEEINLLGDG 175
Query: 120 EADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 160
PEF EW W SP++VVE AV++K+P Y+EVM F +L
Sbjct: 176 TEKPEFGEWSWTSPDQVVENAVEFKKPVYKEVMSAFASHLQ 216
>sp|Q9FNH4|NUD27_ARATH Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana GN=NUDT27
PE=1 SV=1
Length = 227
Score = 202 bits (515), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 113/156 (72%), Gaps = 1/156 (0%)
Query: 5 PSGYRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVS 64
P GYR NVG+CL++ +IF AS++++P WQMPQGG ++GED + AA RELREETG+ S
Sbjct: 59 PVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQGGADEGEDLRNAAFRELREETGVTS 118
Query: 65 AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEIN-LANGEADP 123
AE IAE+PNWLTYDFP VK K+NR W + GQAQKWFL K T E EIN L +G A P
Sbjct: 119 AEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQKWFLFKFTGKEEEINLLGDGTAKP 178
Query: 124 EFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 159
EF W W PE+V+E AV +KRP YE V++ F PY
Sbjct: 179 EFKVWSWMLPEQVIEHAVYFKRPVYEHVIKQFNPYF 214
>sp|B9KN59|RPPH_RHOSK RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain KD131 /
KCTC 12085) GN=rppH PE=3 SV=1
Length = 162
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 1 MDGLPSGYRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREE 59
+D L YRP VG+ LIN + IF R++ P AWQMPQGGI++GE P+ AA+REL EE
Sbjct: 5 IDPLTLPYRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEE 64
Query: 60 TGIVS--AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLA 117
TGI + E +A+ P+W+TYD PP + + R+WGG++ GQ QKWFL + + E+ +
Sbjct: 65 TGIPAERVEFVAKAPDWVTYDLPPEL---LGRVWGGKYRGQRQKWFLYRYLGTDEEVGIG 121
Query: 118 NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 159
A EF+ W+W EE+V V +KR YEEV+ TFRP+L
Sbjct: 122 TDHA--EFSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161
>sp|Q3IZC1|RPPH_RHOS4 RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rppH PE=3 SV=1
Length = 162
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 1 MDGLPSGYRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREE 59
+D L YRP VG+ LIN + IF R++ P AWQMPQGGI++GE P+ AA+REL EE
Sbjct: 5 IDPLTLPYRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEE 64
Query: 60 TGIVS--AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLA 117
TGI + E +A+ P+W+TYD PP + + R+WGG++ GQ QKWFL + + E+ +
Sbjct: 65 TGIPAERVEFVAKAPDWVTYDLPPEL---LGRVWGGKYRGQRQKWFLYRYLGTDEEVGIG 121
Query: 118 NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 159
A EF+ W+W EE+V V +KR YEEV+ TFRP+L
Sbjct: 122 TDHA--EFSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161
>sp|A3PMX6|RPPH_RHOS1 RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=rppH PE=3 SV=1
Length = 162
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 103/155 (66%), Gaps = 8/155 (5%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVS-- 64
YRP VG+ LIN + IF R++ P AWQMPQGGI++GE P+ AA+REL EETGI +
Sbjct: 12 YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDEGEKPREAALRELWEETGIPAER 71
Query: 65 AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPE 124
E +A+ P+W+TYD PP + + R+WGG++ GQ QKWFL + + E+ + A E
Sbjct: 72 VEFVAKAPDWVTYDLPPEL---LGRVWGGKYRGQRQKWFLYRYLGTDDEVGIGTDHA--E 126
Query: 125 FAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 159
F+ W+W EE+V V +KR YEEV+ TFRP+L
Sbjct: 127 FSCWRWIGAEEMVAAIVPFKRAVYEEVVATFRPHL 161
>sp|Q2RV14|RPPH_RHORT RNA pyrophosphohydrolase OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=rppH PE=3 SV=1
Length = 165
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 97/150 (64%), Gaps = 7/150 (4%)
Query: 3 GLPSGYRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGI 62
GLP YR VG+ LIN+ Q+FVA RL+ P AWQMPQGGI+ GEDP+ AA RE+ EE G
Sbjct: 11 GLP--YRQGVGIMLINARGQVFVARRLDSPEAWQMPQGGIDAGEDPETAAWREMEEEIGT 68
Query: 63 VSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEAD 122
+A ++ E WL YD P ++ RLWGG + GQ QKWF + T +++INLA A
Sbjct: 69 RNALLLGETAGWLGYDLPEELR---GRLWGGRFQGQRQKWFAFRFTGQDADINLAT--AH 123
Query: 123 PEFAEWKWASPEEVVEQAVDYKRPTYEEVM 152
PEF W+W + +V V +KRP YE+V+
Sbjct: 124 PEFDAWRWVDVDTLVALIVPFKRPVYEQVV 153
>sp|A4WWV6|RPPH_RHOS5 RNA pyrophosphohydrolase OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=rppH PE=3 SV=1
Length = 162
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 100/156 (64%), Gaps = 8/156 (5%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVS-- 64
YRP VG+ LIN + IF R++ P AWQMPQGGI+ E P+ AA+REL+EETGI
Sbjct: 12 YRPCVGIVLINREGLIFAGQRIDSPVPAWQMPQGGIDADEKPRQAALRELQEETGIPEDL 71
Query: 65 AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPE 124
E +A+ P W+TYD PP + + R+WGG++ GQ QKWFL + + +I +A A E
Sbjct: 72 VEFVAKAPEWVTYDLPPDL---LGRVWGGKYRGQRQKWFLFRYLGTDEQIGIATEHA--E 126
Query: 125 FAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 160
F+ W+W EE+V V +KRP YE V+ FR +L+
Sbjct: 127 FSCWRWIGAEEMVASIVPFKRPVYERVVAMFREHLS 162
>sp|A8LKJ8|RPPH_DINSH RNA pyrophosphohydrolase OS=Dinoroseobacter shibae (strain DFL 12)
GN=rppH PE=3 SV=1
Length = 160
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 98/156 (62%), Gaps = 10/156 (6%)
Query: 8 YRPNVGVCLINSDSQIFVASRLN--VPGAWQMPQGGIEDGEDPKLAAMRELREETGIV-- 63
YR VGV L + ++F R + +P AWQMPQGGIEDGED + AA+REL EETG+
Sbjct: 11 YRKCVGVVLWDGAGRVFTGQRYDSELP-AWQMPQGGIEDGEDARTAALRELVEETGVAVE 69
Query: 64 SAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADP 123
E++AE P+W+ YD PP + V R+W G + GQAQ+W LMK +++IN+ P
Sbjct: 70 KVEVLAETPDWIKYDLPPEI---VPRIWKGRYKGQAQRWVLMKFLGSDADINIETKH--P 124
Query: 124 EFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 159
EF+EW+W P V++ V +KR YE+V F +L
Sbjct: 125 EFSEWRWLEPASVLDSIVPFKRDVYEQVFDAFSDWL 160
>sp|Q5LMH8|RPPH_RUEPO RNA pyrophosphohydrolase OS=Ruegeria pomeroyi (strain ATCC 700808 /
DSM 15171 / DSS-3) GN=rppH PE=3 SV=1
Length = 161
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 97/156 (62%), Gaps = 8/156 (5%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNV-PGAWQMPQGGIEDGEDPKLAAMRELREETGIVS-- 64
YRP VGV L+N D +FV R++ AWQMPQGG+++ EDP AA+REL EETG+ +
Sbjct: 11 YRPCVGVVLMNGDGFVFVGQRMDQNTDAWQMPQGGVDEDEDPFEAALRELWEETGVTADL 70
Query: 65 AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPE 124
E++AE WL YD P + V R+W G + GQ QKW+L + + +I+L G PE
Sbjct: 71 VEMVAETDGWLPYDLPHDL---VPRIWKGRYRGQEQKWYLFRFLGRDDQIDLETGH--PE 125
Query: 125 FAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 160
F+ WKW P+ +V + V +KR YE V+ F P+L
Sbjct: 126 FSRWKWQDPDRLVAEIVPFKRDVYERVVAAFAPHLG 161
>sp|Q16BL5|RPPH_ROSDO RNA pyrophosphohydrolase OS=Roseobacter denitrificans (strain ATCC
33942 / OCh 114) GN=rppH PE=3 SV=1
Length = 160
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 98/155 (63%), Gaps = 8/155 (5%)
Query: 8 YRPNVGVCLINSDSQIFVASRL-NVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVS-- 64
YRP VGV L+N ++FV R N AWQMPQGG+E GEDP+ AA+REL EETG+
Sbjct: 11 YRPCVGVMLMNGQGEVFVGQRRDNNVAAWQMPQGGVEKGEDPRAAALRELWEETGVNPEL 70
Query: 65 AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPE 124
AE++AE +WL YD P + V +LW G + GQ QKWFLM+ +S+IN+A PE
Sbjct: 71 AEVVAETEDWLPYDLPYDL---VPKLWKGRYRGQEQKWFLMRFHGADSDINIAT--EHPE 125
Query: 125 FAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 159
F++W+W ++VE V +KR Y V+ F +L
Sbjct: 126 FSQWRWLPAADLVENIVPFKRDVYVAVLDAFEAHL 160
>sp|Q68XD3|RPPH_RICTY RNA pyrophosphohydrolase OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=rppH PE=3 SV=1
Length = 161
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 96/149 (64%), Gaps = 6/149 (4%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66
YRP VG+ ++N+D+QIFV R++ AWQMPQGGI GE P +AAMRE+ EE G
Sbjct: 13 YRPGVGMMILNADNQIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSNKGY 72
Query: 67 IIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFA 126
IIAE W +YD P + + +LW G + GQ Q+WFL++ T + +IN+ ++PEF
Sbjct: 73 IIAESKCWYSYDVPSFL---IPKLWNGNFRGQKQRWFLIRFTGNNKDINIHT--SNPEFD 127
Query: 127 EWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
+W+W S +E++ + +KR Y+ V++ F
Sbjct: 128 QWRWTSLDELLSIIIPFKRKLYQAVVKEF 156
>sp|A1B502|RPPH_PARDP RNA pyrophosphohydrolase OS=Paracoccus denitrificans (strain Pd
1222) GN=rppH PE=3 SV=1
Length = 163
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 96/160 (60%), Gaps = 10/160 (6%)
Query: 3 GLPSGYRPNVGVCLINSDSQIFVASRLNVPG-AWQMPQGGIEDGEDPKLAAMRELREETG 61
GLP YRP GV LIN +F R++ PG AWQMPQGGI+ GE P+ AA+REL EETG
Sbjct: 10 GLP--YRPCAGVVLINPVGLVFAGQRIDNPGPAWQMPQGGIDRGESPREAALRELVEETG 67
Query: 62 IVS--AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANG 119
+ +++AE P W+TYD PP + KV W G + GQ QKWF M+ ++S + +A
Sbjct: 68 VTPDLVDVLAETPGWVTYDLPPELLGKV---WKGRYGGQKQKWFAMRFLGEDSAVRIAT- 123
Query: 120 EADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 159
PEF W+W ++++ V +KR Y V+ FR L
Sbjct: 124 -EHPEFERWQWMRAADLIDGIVPFKRDVYARVLSDFREIL 162
>sp|C4K0V5|RPPH_RICPU RNA pyrophosphohydrolase OS=Rickettsia peacockii (strain Rustic)
GN=rppH PE=3 SV=1
Length = 161
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 96/149 (64%), Gaps = 6/149 (4%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66
YRP VG+ ++N+D+ IFV R++ AWQMPQGGI GE P +AAMRE+ EE G
Sbjct: 13 YRPGVGMMILNADNHIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGY 72
Query: 67 IIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFA 126
IIAE W +YD P + + +LW G + GQ Q+WFL++ T + +IN+ ++PEF
Sbjct: 73 IIAESKFWYSYDVPSFL---IPKLWNGNFRGQKQRWFLIRFTGNNEDINI--NTSNPEFD 127
Query: 127 EWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
+W+WAS +E++ + +KR Y+ V++ F
Sbjct: 128 QWRWASLDELLSIIIPFKRKLYQAVVKEF 156
>sp|Q1RHV9|RPPH_RICBR RNA pyrophosphohydrolase OS=Rickettsia bellii (strain RML369-C)
GN=rppH PE=3 SV=1
Length = 161
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 95/149 (63%), Gaps = 6/149 (4%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66
YRP VG+ ++N+D++IFV R++ AWQMPQGGI GE P +AAMRE+ EE G
Sbjct: 13 YRPGVGMMILNADNKIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSSKGY 72
Query: 67 IIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFA 126
IIAE W +YD P + + +LW G + GQ Q+WFL++ T +IN+ +PEF
Sbjct: 73 IIAESKCWYSYDVPSFL---IPKLWDGNFRGQKQRWFLIRFTGTNEDINI--NTLNPEFD 127
Query: 127 EWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
EW+WAS +E++ + +KR Y+ V++ F
Sbjct: 128 EWRWASLDELLSIIIPFKRKLYQAVVKEF 156
>sp|A8GW83|RPPH_RICB8 RNA pyrophosphohydrolase OS=Rickettsia bellii (strain OSU 85-389)
GN=rppH PE=3 SV=1
Length = 161
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 95/149 (63%), Gaps = 6/149 (4%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66
YRP VG+ ++N+D++IFV R++ AWQMPQGGI GE P +AAMRE+ EE G
Sbjct: 13 YRPGVGMMILNADNKIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSSKGY 72
Query: 67 IIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFA 126
IIAE W +YD P + + +LW G + GQ Q+WFL++ T +IN+ +PEF
Sbjct: 73 IIAESKCWYSYDVPSFL---IPKLWDGNFRGQKQRWFLIRFTGTNEDINI--NTLNPEFD 127
Query: 127 EWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
EW+WAS +E++ + +KR Y+ V++ F
Sbjct: 128 EWRWASLDELLSIIIPFKRKLYQAVVKEF 156
>sp|A8EXY5|RPPH_RICCK RNA pyrophosphohydrolase OS=Rickettsia canadensis (strain McKiel)
GN=rppH PE=3 SV=1
Length = 161
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 95/149 (63%), Gaps = 6/149 (4%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66
YRP VG+ ++N+D+ IFV R++ AWQMPQGGI GE P +AAMRE+ EE G
Sbjct: 13 YRPGVGMMILNADNHIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGY 72
Query: 67 IIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFA 126
IIAE W +YD P + + +LW G + GQ Q+WFL++ T + +IN+ ++PEF
Sbjct: 73 IIAESKCWYSYDLPSFL---IPKLWNGNFRGQKQRWFLIRFTGNNEDINI--NTSNPEFD 127
Query: 127 EWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
+W+WAS E++ + +KR Y+ V++ F
Sbjct: 128 QWRWASLNELLSIIIPFKRKLYQAVVKEF 156
>sp|A8GRA7|RPPH_RICRS RNA pyrophosphohydrolase OS=Rickettsia rickettsii (strain Sheila
Smith) GN=rppH PE=3 SV=1
Length = 161
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 96/149 (64%), Gaps = 6/149 (4%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66
YRP VG+ ++N+D+ IFV R++ AWQMPQGGI GE P +AAMRE+ EE G
Sbjct: 13 YRPGVGMMILNADNHIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGY 72
Query: 67 IIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFA 126
IIAE W +YD P + + +LW G + GQ Q+WFL++ T + +IN+ ++PEF
Sbjct: 73 IIAESKCWYSYDVPSFL---IPKLWNGNFRGQKQRWFLIRFTGNNEDINI--NTSNPEFD 127
Query: 127 EWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
+W+WAS +E++ + +KR Y+ V++ F
Sbjct: 128 QWRWASLDELLSIIIPFKRKLYQAVVKEF 156
>sp|B0BWQ7|RPPH_RICRO RNA pyrophosphohydrolase OS=Rickettsia rickettsii (strain Iowa)
GN=rppH PE=3 SV=1
Length = 161
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 96/149 (64%), Gaps = 6/149 (4%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66
YRP VG+ ++N+D+ IFV R++ AWQMPQGGI GE P +AAMRE+ EE G
Sbjct: 13 YRPGVGMMILNADNHIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGY 72
Query: 67 IIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFA 126
IIAE W +YD P + + +LW G + GQ Q+WFL++ T + +IN+ ++PEF
Sbjct: 73 IIAESKCWYSYDVPSFL---IPKLWNGNFRGQKQRWFLIRFTGNNEDINI--NTSNPEFD 127
Query: 127 EWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
+W+WAS +E++ + +KR Y+ V++ F
Sbjct: 128 QWRWASLDELLSIIIPFKRKLYQAVVKEF 156
>sp|Q4UKM5|RPPH_RICFE RNA pyrophosphohydrolase OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=rppH PE=3 SV=1
Length = 161
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 96/149 (64%), Gaps = 6/149 (4%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66
YRP VG+ ++N+D+ IFV R++ AWQMPQGGI GE P +AAMRE+ EE G
Sbjct: 13 YRPGVGMMILNADNHIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGY 72
Query: 67 IIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFA 126
IIAE W +YD P + + +LW G + GQ Q+WFL++ T + +IN+ ++PEF
Sbjct: 73 IIAESKCWYSYDVPSFL---IPKLWNGNFRGQKQRWFLIRFTGNNEDINI--NTSNPEFD 127
Query: 127 EWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
+W+WAS +E++ + +KR Y+ V++ F
Sbjct: 128 QWRWASLDELLSIIIPFKRKLYQAVVKEF 156
>sp|C3PMT3|RPPH_RICAE RNA pyrophosphohydrolase OS=Rickettsia africae (strain ESF-5)
GN=rppH PE=3 SV=1
Length = 161
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 96/149 (64%), Gaps = 6/149 (4%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66
YRP VG+ ++N+D+ IFV R++ AWQMPQGGI GE P +AAMRE+ EE G
Sbjct: 13 YRPGVGMMILNADNHIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGY 72
Query: 67 IIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFA 126
IIAE W +YD P + + +LW G + GQ Q+WFL++ T + +IN+ ++PEF
Sbjct: 73 IIAESKFWYSYDVPSFL---IPKLWNGNFRGQQQRWFLIRFTGNNEDINI--NTSNPEFD 127
Query: 127 EWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
+W+WAS +E++ + +KR Y+ V++ F
Sbjct: 128 QWRWASLDELLSIIIPFKRKLYQAVVKEF 156
>sp|Q9ZDT9|RPPH_RICPR RNA pyrophosphohydrolase OS=Rickettsia prowazekii (strain Madrid E)
GN=rppH PE=1 SV=1
Length = 161
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 96/149 (64%), Gaps = 6/149 (4%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66
YRP VG+ ++N+D+QIFV R++ +WQMPQGGI GE P +AAMRE+ EE G
Sbjct: 13 YRPGVGMMILNADNQIFVGKRIDTKISSWQMPQGGIVPGETPSIAAMREMLEEIGSNKGY 72
Query: 67 IIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFA 126
IIAE W +YD P + + +LW G + GQ Q+WFL++ T + +IN+ ++PEF
Sbjct: 73 IIAESKCWYSYDVPSFL---IPKLWNGNFRGQKQRWFLIRFTGNNKDINIHT--SNPEFD 127
Query: 127 EWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
+W+W S +E++ + +KR Y+ V++ F
Sbjct: 128 QWRWTSLDELLSIIIPFKRKLYQAVVKEF 156
>sp|A8HRT0|RPPH_AZOC5 RNA pyrophosphohydrolase OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=rppH PE=3 SV=1
Length = 168
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 98/170 (57%), Gaps = 14/170 (8%)
Query: 1 MDGLPSGYRPNVGVCLINSDSQIFVASRLNVP------GAWQMPQGGIEDGEDPKLAAMR 54
++ LP YRP VG+ + N Q+F+ RL+ P +WQMPQGGI+ GE+P AA+R
Sbjct: 4 LEDLP--YRPCVGLAIFNRAGQVFLGQRLSGPEHVDATHSWQMPQGGIDKGEEPYEAALR 61
Query: 55 ELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEI 114
EL EET I S + EV +WL+YD P V + W G++ GQ QKWF ++ T DE EI
Sbjct: 62 ELYEETSIRSVVKLGEVEDWLSYDLPGRVAGEA---WKGKYRGQTQKWFALRFTGDEGEI 118
Query: 115 NL---ANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 161
++ G EF W+W + + E + +KR YE V R FR + ++
Sbjct: 119 DILKPGGGAHKAEFCNWRWDALDRAAELVIPFKRQVYERVAREFRRFAHD 168
>sp|Q92IV0|RPPH_RICCN RNA pyrophosphohydrolase OS=Rickettsia conorii (strain ATCC VR-613
/ Malish 7) GN=rppH PE=3 SV=1
Length = 161
Score = 133 bits (334), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 96/149 (64%), Gaps = 6/149 (4%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66
YRP VG+ ++N+++ IFV R++ AWQMPQGGI GE P +AAMRE+ EE G
Sbjct: 13 YRPGVGMMILNANNHIFVGKRIDTKISAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGY 72
Query: 67 IIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFA 126
IIAE W +YD P + + +LW G + GQ Q+WFL++ T + +IN+ ++PEF
Sbjct: 73 IIAESKFWYSYDVPSFL---IPKLWNGNFRGQKQRWFLIRFTGNNEDINI--NTSNPEFD 127
Query: 127 EWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
+W+WAS +E++ + +KR Y+ V++ F
Sbjct: 128 QWRWASLDELLSIIIPFKRKLYQAVVKEF 156
>sp|A8GMN4|RPPH_RICAH RNA pyrophosphohydrolase OS=Rickettsia akari (strain Hartford)
GN=rppH PE=3 SV=1
Length = 161
Score = 132 bits (333), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 97/153 (63%), Gaps = 6/153 (3%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP-GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66
YR VG+ ++N+D+ IFV R++ AWQMPQGGI GE P +AAMRE+ EE G
Sbjct: 13 YRLGVGMMILNADNHIFVGKRIDTKLSAWQMPQGGIVPGETPSIAAMREMLEEIGSDKGY 72
Query: 67 IIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFA 126
IIAE W +YD P + + +LW G + GQ Q+WFL++ T + +IN+ ++PEF
Sbjct: 73 IIAESKCWYSYDVPSLL---IPKLWNGNFRGQKQRWFLIRFTGNNEDINI--NTSNPEFD 127
Query: 127 EWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 159
+W+WAS +E++ + +KR Y+ V++ F+ +
Sbjct: 128 QWRWASLDELLSIIIPFKRKLYQAVVKEFKSLI 160
>sp|Q5FU29|RPPH_GLUOX RNA pyrophosphohydrolase OS=Gluconobacter oxydans (strain 621H)
GN=rppH PE=3 SV=1
Length = 170
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 95/146 (65%), Gaps = 5/146 (3%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVPG-AWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66
YRPNVG+ L N D ++F+A R ++PG WQ PQGGI++GE P++AA+RE+ EE G +A
Sbjct: 9 YRPNVGIALFNRDGKLFIARRTDLPGDVWQCPQGGIDEGETPQVAALREMGEEIGTQNAR 68
Query: 67 IIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFA 126
I+AE WL+YD P + + + GG + GQ QKWF+M +S+I L + + PEF
Sbjct: 69 ILAERSGWLSYDLPSDL---IGKALGGRFRGQTQKWFVMGYEGQDSDIRL-DLQDPPEFD 124
Query: 127 EWKWASPEEVVEQAVDYKRPTYEEVM 152
W+W P+ V+ + + +K+ Y E++
Sbjct: 125 AWEWVDPQAVLNRNLGFKKALYAELI 150
>sp|A5FWY8|RPPH_ACICJ RNA pyrophosphohydrolase OS=Acidiphilium cryptum (strain JF-5)
GN=rppH PE=3 SV=1
Length = 164
Score = 129 bits (325), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 90/160 (56%), Gaps = 9/160 (5%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNV-PGA---WQMPQGGIEDGEDPKLAAMRELREETGIV 63
YR NVG L + +I VA R ++ P A WQ+PQGGI+ EDP A +REL EE G
Sbjct: 9 YRSNVGAALFSRAGKILVARRADLGPDAAYQWQLPQGGIDGDEDPAAAVLRELDEEIGTT 68
Query: 64 SAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADP 123
+ E++ E+P WL+YDFPP V K +G GQ Q+WF ++ + I L + A P
Sbjct: 69 AVELLGEIPEWLSYDFPPDVVAK----FGARHRGQRQRWFALRFLGTDDMIRL-DAHAHP 123
Query: 124 EFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNENG 163
EF EW+W + AV +KRP YE + R F + +G
Sbjct: 124 EFDEWRWTELSSIPALAVPFKRPIYERLARDFARFAKTDG 163
>sp|Q3SVH3|RPPH_NITWN RNA pyrophosphohydrolase OS=Nitrobacter winogradskyi (strain Nb-255
/ ATCC 25391) GN=rppH PE=3 SV=1
Length = 170
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 95/161 (59%), Gaps = 12/161 (7%)
Query: 2 DGLPSGYRPNVGVCLINSDSQIFVASRLNVPGA-----WQMPQGGIEDGEDPKLAAMREL 56
D LP YR VG+ LIN +FV R V WQMPQGG++ GED LAA REL
Sbjct: 5 DDLP--YRTCVGMMLINERGLVFVGRRAGVEQVDDSYVWQMPQGGVDPGEDTWLAAKREL 62
Query: 57 REETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINL 116
EET + S E +AE+P+WLTYD P V R W G + GQ QKW+ ++ +++EIN+
Sbjct: 63 YEETSVRSIEKLAEIPDWLTYDIPRVV---AGRAWKGRYRGQRQKWYAVRFIGEDNEINI 119
Query: 117 AN-GEAD-PEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
AN G+ PEF W+W + + + +KRP YE V++ F
Sbjct: 120 ANPGDGHKPEFTAWRWEPMQNLTGLIIPFKRPVYERVVKEF 160
>sp|Q5GT39|RPPH_WOLTR RNA pyrophosphohydrolase OS=Wolbachia sp. subsp. Brugia malayi
(strain TRS) GN=rppH PE=3 SV=1
Length = 161
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 88/148 (59%), Gaps = 4/148 (2%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI 67
YRP VG+ L N +F+ R + WQMPQGGI+DGE + AA+REL EE G A+I
Sbjct: 8 YRPCVGIMLFNKQGHVFIGKRFDSDSYWQMPQGGIDDGEKLEQAALRELLEEVGTDKAKI 67
Query: 68 IAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAE 127
IA+ +W+ Y+ P V + W G + GQ Q+WFLMK + +IN+ N PEF E
Sbjct: 68 IAKNKDWIYYNLPEEV---IPTCWNGRYSGQKQRWFLMKFYGEGKDINI-NYTDHPEFKE 123
Query: 128 WKWASPEEVVEQAVDYKRPTYEEVMRTF 155
W+W S + +V A+ +K+ Y+ V+ F
Sbjct: 124 WRWQSVDNLVAGAIPFKKEVYKTVIEEF 151
>sp|Q2G7H8|RPPH_NOVAD RNA pyrophosphohydrolase OS=Novosphingobium aromaticivorans (strain
DSM 12444) GN=rppH PE=3 SV=1
Length = 161
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 100/161 (62%), Gaps = 10/161 (6%)
Query: 3 GLPSGYRPNVGVCLINSDSQIFVASRLNVPG--AWQMPQGGIEDGEDPKLAAMRELREET 60
GLP YRP VGV L+NS ++FV R++ AWQMPQGGI+DGE+ AA+REL EET
Sbjct: 7 GLP--YRPCVGVMLVNSQGRVFVGRRIDDKDGVAWQMPQGGIDDGEELHPAALRELSEET 64
Query: 61 GIVS--AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLAN 118
G+ + IIAE YD P + + +LWGG++ GQ QKW L++ ++++I L +
Sbjct: 65 GVAAELVTIIAESREEHLYDLPDEL---IGKLWGGQYRGQRQKWLLLRFAGEDTDIRL-D 120
Query: 119 GEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 159
EF+EW+W PE++ + V +KR Y +V+ FR +
Sbjct: 121 AHDPAEFSEWRWVEPEQLPDLIVPFKRRVYRQVVDEFRDLI 161
>sp|Q2N9Y3|RPPH_ERYLH RNA pyrophosphohydrolase OS=Erythrobacter litoralis (strain
HTCC2594) GN=rppH PE=3 SV=1
Length = 164
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 96/156 (61%), Gaps = 8/156 (5%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVP--GAWQMPQGGIEDGEDPKLAAMRELREETGIVS- 64
YR GV L N + +F A R++ GAWQMPQGGI+ GE + AAMREL EETG+ +
Sbjct: 13 YRQCAGVMLANREGLVFAAQRIDSKNLGAWQMPQGGIDPGETQQEAAMRELEEETGVSAD 72
Query: 65 -AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADP 123
A++IA +P + YD P ++ K LWGG + GQ Q WFL + T +++I++A P
Sbjct: 73 LADVIARMPYPVRYDLPEELQGK---LWGGRYRGQEQHWFLARFTGTDADIDIA-AHNPP 128
Query: 124 EFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 159
EF+EWKW P+E+ V +KR Y V++ FR +
Sbjct: 129 EFSEWKWVEPDELPRLIVPFKREVYRAVVKEFRSLI 164
>sp|B3CM46|RPPH_WOLPP RNA pyrophosphohydrolase OS=Wolbachia pipientis subsp. Culex
pipiens (strain wPip) GN=rppH PE=3 SV=1
Length = 162
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 4/148 (2%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI 67
YRP VG+ L N IF+ R + WQMPQGG+++GE+ + AA+REL EE G AE+
Sbjct: 8 YRPCVGIMLFNKQGNIFIGKRFDSDSYWQMPQGGVDEGEELEQAALRELLEEVGTDEAEV 67
Query: 68 IAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAE 127
+A+ W+ Y+ P V + W G + GQ Q+WFLMK + +IN+ N PEF E
Sbjct: 68 VAQNKEWIYYNLPEEV---IPICWNGRYSGQKQRWFLMKFCGKDKDINI-NYTDHPEFKE 123
Query: 128 WKWASPEEVVEQAVDYKRPTYEEVMRTF 155
W+W + +++V A+ +K+ Y++V+ F
Sbjct: 124 WRWQNVDDLVASAIPFKKEVYKKVIEEF 151
>sp|C0R4X8|RPPH_WOLWR RNA pyrophosphohydrolase OS=Wolbachia sp. subsp. Drosophila
simulans (strain wRi) GN=rppH PE=3 SV=1
Length = 162
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 4/159 (2%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI 67
YRP VG+ L N F+ R + WQMPQGG++DGE+ + AA+REL EE G ++
Sbjct: 8 YRPCVGIMLFNRQGHAFIGKRFDSDSYWQMPQGGVDDGEELEQAALRELLEEVGTNKVKV 67
Query: 68 IAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAE 127
I + +W+ Y+ P V + W G++ GQ Q+WFLMK ++ +I++ N PEF E
Sbjct: 68 ITKSKDWIYYNLPEEV---IPICWNGKYSGQKQRWFLMKFCGEDEDIDI-NYTGHPEFKE 123
Query: 128 WKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNENGIAA 166
W+W + +V A+ +K+ Y+ V+ F + + I++
Sbjct: 124 WRWQGIDSLVASAISFKKEVYKTVIEEFSSIIKASTISS 162
>sp|P61786|RPPH_RHOPA RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=rppH PE=3 SV=1
Length = 168
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 89/156 (57%), Gaps = 11/156 (7%)
Query: 8 YRPNVGVCLINSDSQIFVASR------LNVPGAWQMPQGGIEDGEDPKLAAMRELREETG 61
YR VGV LIN + +F+ R ++ WQMPQGG++ GED AA REL EET
Sbjct: 9 YRTCVGVMLINREGLVFIGRRAGGIEHVDDTHVWQMPQGGVDPGEDTWKAAKRELYEETS 68
Query: 62 IVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLAN--G 119
+ S E +AEVP+WL YD P +T R W G + GQ QKWF + T +SEIN+ + G
Sbjct: 69 VNSVEKLAEVPDWLIYDIP---RTVAGRAWKGRYRGQRQKWFAARFTGADSEINVVHPGG 125
Query: 120 EADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
EF W+W + E V +KRP YE V++ F
Sbjct: 126 GHKAEFTSWRWEPMHNLPELIVPFKRPVYERVVKEF 161
>sp|P61787|RPPH_WOLPM RNA pyrophosphohydrolase OS=Wolbachia pipientis wMel GN=rppH PE=3
SV=1
Length = 162
Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 91/159 (57%), Gaps = 4/159 (2%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI 67
YRP VG+ L N F+ R WQMPQGG++DGE+ + AA+REL EE G ++
Sbjct: 8 YRPCVGIMLFNRQGHAFIGKRFESDSYWQMPQGGVDDGEELEQAALRELLEEVGTNKVKV 67
Query: 68 IAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAE 127
I + +W+ Y+ P V + W G++ GQ Q+WFLMK ++ +I++ N PEF E
Sbjct: 68 ITKSKDWIYYNLPEEV---IPICWNGKYSGQKQRWFLMKFCGEDEDIDI-NYTGHPEFKE 123
Query: 128 WKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNENGIAA 166
W+W + +V A+ +K+ Y+ V+ F + + I++
Sbjct: 124 WRWQGIDSLVASAISFKKEVYKTVIEEFSSIIKASTISS 162
>sp|A9H3A6|RPPH_GLUDA RNA pyrophosphohydrolase OS=Gluconacetobacter diazotrophicus
(strain ATCC 49037 / DSM 5601 / PAl5) GN=rppH PE=3 SV=1
Length = 167
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 89/156 (57%), Gaps = 12/156 (7%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVPGA--------WQMPQGGIEDGEDPKLAAMRELREE 59
YR NVG L N+ +I + R + PGA WQ PQGGI+ EDP+ A +RELREE
Sbjct: 9 YRRNVGAMLFNAQGRILIGRRTDQPGAGGPLDGGVWQCPQGGIDADEDPEEAVLRELREE 68
Query: 60 TGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANG 119
G A I+ P+WLTYD P A+ + R GG + GQ QKWF ++ T +S+I L +
Sbjct: 69 IGTDRAVIMGARPDWLTYDLPAAL---IGRALGGRYRGQTQKWFALRFTGQDSDIRLDD- 124
Query: 120 EADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
+ PEF W+W + E+ V +KR Y ++R F
Sbjct: 125 QQPPEFDAWQWIDLPSLPERNVGFKRDIYRTLVRDF 160
>sp|Q21CZ3|RPPH_RHOPB RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain
BisB18) GN=rppH PE=3 SV=1
Length = 175
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 95/162 (58%), Gaps = 13/162 (8%)
Query: 2 DGLPSGYRPNVGVCLINSDSQIFVASRL------NVPGAWQMPQGGIEDGEDPKLAAMRE 55
D LP YR VG+ L+N++ +F+ RL + WQMPQGG++ GEDP AA RE
Sbjct: 5 DDLP--YRTCVGMMLLNAEGLVFIGRRLGGIEHVDETHVWQMPQGGVDPGEDPWTAAKRE 62
Query: 56 LREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEIN 115
L EET + S E + E+ +WL YD P +T R W G + GQ QKW+ ++ T D+SEI+
Sbjct: 63 LYEETSVRSVEKLGEIADWLIYDIP---RTVAGRSWKGRYRGQRQKWYAVRFTGDDSEID 119
Query: 116 LAN--GEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
+ + G EF W+W + + + V +KRP YE V++ F
Sbjct: 120 VVSPGGGHKAEFISWRWEPMQNLPDLIVPFKRPVYERVVKEF 161
>sp|Q4FP40|RPPH_PELUB RNA pyrophosphohydrolase OS=Pelagibacter ubique (strain HTCC1062)
GN=rppH PE=3 SV=1
Length = 158
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 92/153 (60%), Gaps = 6/153 (3%)
Query: 9 RPNVGVCLINSDSQIFVASRL-NVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI 67
R VG+ ++N D+++FVA R+ N WQMPQGG++ GED AA REL EET I + E+
Sbjct: 11 RNGVGIVVLNKDNKVFVAKRIDNQKNFWQMPQGGVDKGEDYLTAAYRELEEETSIKNVEL 70
Query: 68 IAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAE 127
I E ++Y+ P K + +W G++ GQ QKWF+M+ ++EI++ PEF+E
Sbjct: 71 IKECDGLISYELP---KNLLGIIWKGKYRGQEQKWFIMRFLGQDNEIDIKTKH--PEFSE 125
Query: 128 WKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 160
WKW E + + VD+K Y++V + LN
Sbjct: 126 WKWIDLENITDLVVDFKLHVYKDVKEKVKEILN 158
>sp|Q13DN7|RPPH_RHOPS RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain
BisB5) GN=rppH PE=3 SV=1
Length = 167
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 91/155 (58%), Gaps = 10/155 (6%)
Query: 8 YRPNVGVCLINSDSQIFVASR------LNVPGAWQMPQGGIEDGEDPKLAAMRELREETG 61
YR VG+ LIN + +F+ R ++ WQMPQGG++ GED AA REL EET
Sbjct: 9 YRTCVGMMLINREGLVFIGRRAGGIEHVDDTHVWQMPQGGVDPGEDTWEAAKRELYEETN 68
Query: 62 IVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINL-ANGE 120
+ S E I EVP+WL YD P +T R W G + GQ QKWF ++ T +SEI++ A G
Sbjct: 69 VRSVEKIGEVPDWLIYDIP---RTVAGRAWKGRYRGQRQKWFAVRFTGADSEIDVGAPGG 125
Query: 121 ADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
PEF W+W + + + V +KRP YE V++ F
Sbjct: 126 HKPEFTGWRWEPMQNLPDLIVPFKRPVYERVVKEF 160
>sp|Q89X78|RPPH_BRAJA RNA pyrophosphohydrolase OS=Bradyrhizobium japonicum (strain USDA
110) GN=rppH PE=3 SV=1
Length = 167
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 89/156 (57%), Gaps = 11/156 (7%)
Query: 8 YRPNVGVCLINSDSQIFVASR------LNVPGAWQMPQGGIEDGEDPKLAAMRELREETG 61
YR VGV LIN+ +F+ R ++ WQMPQGG++ GED AA REL EET
Sbjct: 9 YRTCVGVMLINAKGLVFIGRRAGGIEHIDDTHVWQMPQGGVDPGEDTWAAAKRELYEETS 68
Query: 62 IVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLAN--G 119
+ S E + EVP+WL YD P +T R W G + GQ QKWF ++ T +SEIN+ N G
Sbjct: 69 VRSVERLGEVPDWLIYDIP---RTVAGRAWKGRYRGQRQKWFAVRFTGKDSEINVENPGG 125
Query: 120 EADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
EF W+W + + + +KRP YE V++ F
Sbjct: 126 GHKAEFVSWRWEPMKNLPGLIIPFKRPVYERVVKEF 161
>sp|A6Q441|RPPH_NITSB RNA pyrophosphohydrolase OS=Nitratiruptor sp. (strain SB155-2)
GN=rppH PE=3 SV=1
Length = 155
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 96/153 (62%), Gaps = 12/153 (7%)
Query: 8 YRPNVGVCLINSDS----QIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIV 63
YRPNV +++S+ + F+A+R +VP +WQ PQGGI+ GE PK A +REL+EE G
Sbjct: 6 YRPNVAAIVLSSNYPKKVEFFIAARSDVPDSWQFPQGGIDKGESPKEALLRELKEEIGTD 65
Query: 64 SAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADP 123
EIIAE P W++YDFP + K+ + GQ QK+FL+KL E++I+L E P
Sbjct: 66 KIEIIAEFPEWVSYDFPKKIAKKMY-----PYDGQTQKYFLVKL-KPEAKIDLDTKE--P 117
Query: 124 EFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 156
EF ++K+ +++ +KRP Y++V+ F+
Sbjct: 118 EFNDYKFVPYKDLFHYVTFFKRPVYKKVLEYFK 150
>sp|A4YKE4|RPPH_BRASO RNA pyrophosphohydrolase OS=Bradyrhizobium sp. (strain ORS278)
GN=rppH PE=3 SV=1
Length = 168
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 8 YRPNVGVCLINSDSQIFVASR------LNVPGAWQMPQGGIEDGEDPKLAAMRELREETG 61
YR VG+ LINS+ +F+ R ++ WQMPQGG++ GED AA REL EET
Sbjct: 9 YRTCVGIALINSEGLVFIGRRAGGIEHVDDTHVWQMPQGGVDPGEDAWEAAKRELYEETS 68
Query: 62 IVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINL---AN 118
+ S E +AE+ +WLTYD P +T R W G + GQ QKWF ++ T +SEI++
Sbjct: 69 VRSVEKLAEIDDWLTYDIP---RTVAGRAWKGRYRGQRQKWFALRFTGKDSEIDVEHPGG 125
Query: 119 GEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
G EF W+W + + V +KRP YE V + F
Sbjct: 126 GHHKAEFITWRWEPLQNLPTLIVPFKRPVYERVAKEF 162
>sp|A5E954|RPPH_BRASB RNA pyrophosphohydrolase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182) GN=rppH PE=3 SV=1
Length = 168
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 90/157 (57%), Gaps = 12/157 (7%)
Query: 8 YRPNVGVCLINSDSQIFVASR------LNVPGAWQMPQGGIEDGEDPKLAAMRELREETG 61
YR VG+ LINS+ +F+ R ++ WQMPQGG++ GED AA REL EET
Sbjct: 9 YRTCVGIALINSEGLVFIGRRAGGIEHVDDAHVWQMPQGGVDPGEDAWEAAKRELYEETS 68
Query: 62 IVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINL---AN 118
+ S E +AE+ +WLTYD P +T R W G + GQ QKWF ++ T ++EI++
Sbjct: 69 VRSVEKLAEIDDWLTYDIP---RTVAGRAWKGRYRGQRQKWFALRFTGTDTEIDVERPGG 125
Query: 119 GEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 155
G EF W+W + + V +KRP YE V++ F
Sbjct: 126 GVHKAEFISWRWEPMQNLPTLIVPFKRPVYERVVKEF 162
>sp|Q9A2W6|RPPH_CAUCR RNA pyrophosphohydrolase OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=rppH PE=3 SV=1
Length = 172
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 90/155 (58%), Gaps = 9/155 (5%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65
+RPNVGV L + D ++++ R P WQ PQGG+++GED ++AA REL EETG+ S
Sbjct: 9 HRPNVGVVLFHPDGRVWLGRRHRQAPPYNWQFPQGGVDEGEDLEVAARRELAEETGVTSV 68
Query: 66 EIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADP-- 123
E++ W+TYDFPP V G W GQ Q WF + +ESEI+L EAD
Sbjct: 69 ELLGRTEGWITYDFPPEVMANPKHARG--WRGQKQVWFAYRFVGEESEIDL---EADEHI 123
Query: 124 EFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPY 158
EF W+W +E E V +KR YE V+ F+ +
Sbjct: 124 EFDAWRWGRLDETPELIVPFKRGVYEAVVAAFQGF 158
>sp|B8H5H3|RPPH_CAUCN RNA pyrophosphohydrolase OS=Caulobacter crescentus (strain NA1000 /
CB15N) GN=rppH PE=3 SV=1
Length = 172
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 90/155 (58%), Gaps = 9/155 (5%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65
+RPNVGV L + D ++++ R P WQ PQGG+++GED ++AA REL EETG+ S
Sbjct: 9 HRPNVGVVLFHPDGRVWLGRRHRQAPPYNWQFPQGGVDEGEDLEVAARRELAEETGVTSV 68
Query: 66 EIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADP-- 123
E++ W+TYDFPP V G W GQ Q WF + +ESEI+L EAD
Sbjct: 69 ELLGRTEGWITYDFPPEVMANPKHARG--WRGQKQVWFAYRFVGEESEIDL---EADEHI 123
Query: 124 EFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPY 158
EF W+W +E E V +KR YE V+ F+ +
Sbjct: 124 EFDAWRWGRLDETPELIVPFKRGVYEAVVAAFQGF 158
>sp|Q8FYM9|RPPH_BRUSU RNA pyrophosphohydrolase OS=Brucella suis biovar 1 (strain 1330)
GN=rppH PE=3 SV=2
Length = 178
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 89/159 (55%), Gaps = 13/159 (8%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVPG--------AWQMPQGGIEDGEDPKLAAMRELREE 59
YRP VG+ ++N ++ R+ +PG WQMPQGGI+ GEDP AA+REL EE
Sbjct: 19 YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEE 78
Query: 60 TGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESE--INLA 117
TG+ S ++ E +W+ YD PP + V G++ GQ QKWF + DESE IN
Sbjct: 79 TGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESEIAINPP 135
Query: 118 NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 156
G EF W+W ++ V +KR YE+V+ TFR
Sbjct: 136 PGGHTAEFDCWEWKPMADLPNLIVPFKRKVYEQVVATFR 174
>sp|A9WWW1|RPPH_BRUSI RNA pyrophosphohydrolase OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=rppH PE=3 SV=1
Length = 178
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 89/159 (55%), Gaps = 13/159 (8%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVPG--------AWQMPQGGIEDGEDPKLAAMRELREE 59
YRP VG+ ++N ++ R+ +PG WQMPQGGI+ GEDP AA+REL EE
Sbjct: 19 YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEE 78
Query: 60 TGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESE--INLA 117
TG+ S ++ E +W+ YD PP + V G++ GQ QKWF + DESE IN
Sbjct: 79 TGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESEIAINPP 135
Query: 118 NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 156
G EF W+W ++ V +KR YE+V+ TFR
Sbjct: 136 PGGHTAEFDCWEWKPMADLPNLIVPFKRKVYEQVVATFR 174
>sp|A5VSH6|RPPH_BRUO2 RNA pyrophosphohydrolase OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=rppH PE=3 SV=1
Length = 178
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 89/159 (55%), Gaps = 13/159 (8%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVPG--------AWQMPQGGIEDGEDPKLAAMRELREE 59
YRP VG+ ++N ++ R+ +PG WQMPQGGI+ GEDP AA+REL EE
Sbjct: 19 YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEE 78
Query: 60 TGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESE--INLA 117
TG+ S ++ E +W+ YD PP + V G++ GQ QKWF + DESE IN
Sbjct: 79 TGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESEIAINPP 135
Query: 118 NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 156
G EF W+W ++ V +KR YE+V+ TFR
Sbjct: 136 PGGHTAEFDCWEWKPMADLPNLIVPFKRKVYEQVVATFR 174
>sp|A9M874|RPPH_BRUC2 RNA pyrophosphohydrolase OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=rppH PE=3 SV=1
Length = 178
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 89/159 (55%), Gaps = 13/159 (8%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVPG--------AWQMPQGGIEDGEDPKLAAMRELREE 59
YRP VG+ ++N ++ R+ +PG WQMPQGGI+ GEDP AA+REL EE
Sbjct: 19 YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEE 78
Query: 60 TGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESE--INLA 117
TG+ S ++ E +W+ YD PP + V G++ GQ QKWF + DESE IN
Sbjct: 79 TGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESEIAINPP 135
Query: 118 NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 156
G EF W+W ++ V +KR YE+V+ TFR
Sbjct: 136 PGGHTAEFDCWEWKPMADLPNLIVPFKRKVYEQVVATFR 174
>sp|Q8YJ71|RPPH_BRUME RNA pyrophosphohydrolase OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=rppH PE=3 SV=1
Length = 178
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 89/159 (55%), Gaps = 13/159 (8%)
Query: 8 YRPNVGVCLINSDSQIFVASRLNVPG--------AWQMPQGGIEDGEDPKLAAMRELREE 59
YRP VG+ ++N ++ R+ +PG WQMPQGGI+ GEDP AA+REL EE
Sbjct: 19 YRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEE 78
Query: 60 TGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESE--INLA 117
TG+ S ++ E +W+ YD PP + V G++ GQ QKWF + DESE IN
Sbjct: 79 TGMTSVSLLEEASDWINYDLPPHL---VGLALKGKYRGQTQKWFAYRFEGDESEIAINPP 135
Query: 118 NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 156
G EF W+W ++ V +KR YE+V+ TFR
Sbjct: 136 PGGHTAEFDCWEWKPMADLPNLIVPFKRKVYEQVVATFR 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,481,972
Number of Sequences: 539616
Number of extensions: 2965796
Number of successful extensions: 6683
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 5237
Number of HSP's gapped (non-prelim): 482
length of query: 173
length of database: 191,569,459
effective HSP length: 109
effective length of query: 64
effective length of database: 132,751,315
effective search space: 8496084160
effective search space used: 8496084160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)