Query 030711
Match_columns 173
No_of_seqs 126 out of 1290
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 04:54:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030711.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030711hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1f3y_A Diadenosine 5',5'''-P1, 100.0 8.7E-28 3E-32 167.1 14.6 158 1-158 6-164 (165)
2 3u53_A BIS(5'-nucleosyl)-tetra 99.9 4E-24 1.4E-28 147.6 13.0 132 10-161 4-144 (155)
3 3i7u_A AP4A hydrolase; nudix p 99.9 5.8E-24 2E-28 143.6 10.7 124 9-157 4-127 (134)
4 2kdv_A RNA pyrophosphohydrolas 99.9 8.9E-23 3E-27 142.2 14.1 155 1-161 1-157 (164)
5 2o1c_A DATP pyrophosphohydrola 99.9 7.7E-22 2.6E-26 134.8 14.4 135 1-157 1-147 (150)
6 1ktg_A Diadenosine tetraphosph 99.9 4.9E-22 1.7E-26 134.2 12.5 129 9-160 3-136 (138)
7 3son_A Hypothetical nudix hydr 99.9 1.3E-21 4.5E-26 133.9 12.8 131 10-162 6-144 (149)
8 3grn_A MUTT related protein; s 99.9 1.8E-21 6.1E-26 133.9 13.4 126 6-157 5-135 (153)
9 3r03_A Nudix hydrolase; struct 99.9 7E-22 2.4E-26 134.4 10.4 129 8-161 7-138 (144)
10 1hzt_A Isopentenyl diphosphate 99.9 1.5E-21 5.2E-26 138.9 12.3 148 8-173 31-187 (190)
11 3fcm_A Hydrolase, nudix family 99.9 3.2E-21 1.1E-25 138.1 10.9 144 7-163 43-188 (197)
12 1vcd_A NDX1; nudix protein, di 99.9 8.9E-21 3.1E-25 126.0 12.4 120 10-157 3-122 (126)
13 2pbt_A AP4A hydrolase; nudix p 99.9 4.1E-21 1.4E-25 129.0 10.7 125 9-158 4-128 (134)
14 2w4e_A MUTT/nudix family prote 99.9 5.1E-21 1.8E-25 130.6 11.1 116 8-144 4-122 (145)
15 3gwy_A Putative CTP pyrophosph 99.8 9E-21 3.1E-25 128.5 11.4 121 9-157 6-131 (140)
16 3gg6_A Nudix motif 18, nucleos 99.8 2.4E-21 8.3E-26 133.5 8.6 129 8-161 19-149 (156)
17 1sjy_A MUTT/nudix family prote 99.8 2.9E-20 1E-24 128.3 13.8 118 8-144 12-135 (159)
18 3hhj_A Mutator MUTT protein; n 99.8 5.6E-21 1.9E-25 132.0 10.1 125 8-157 28-155 (158)
19 2jvb_A Protein PSU1, mRNA-deca 99.8 8.2E-21 2.8E-25 129.4 10.6 132 10-162 5-139 (146)
20 3f6a_A Hydrolase, nudix family 99.8 1.1E-20 3.8E-25 130.7 10.4 139 8-158 5-150 (159)
21 4dyw_A MUTT/nudix family prote 99.8 7.2E-21 2.5E-25 131.5 9.3 125 8-156 28-154 (157)
22 3eds_A MUTT/nudix family prote 99.8 1.5E-21 5E-26 134.4 5.8 117 8-144 20-140 (153)
23 3exq_A Nudix family hydrolase; 99.8 9.7E-21 3.3E-25 131.4 9.7 126 7-157 8-136 (161)
24 3h95_A Nucleoside diphosphate- 99.8 2.7E-20 9.3E-25 133.4 12.1 129 8-156 25-155 (199)
25 3oga_A Nucleoside triphosphata 99.8 4E-20 1.4E-24 128.6 11.9 126 8-153 26-160 (165)
26 2yvp_A NDX2, MUTT/nudix family 99.8 1.4E-20 4.9E-25 133.0 9.5 116 9-144 41-159 (182)
27 3ees_A Probable pyrophosphohyd 99.8 2.1E-20 7.2E-25 128.1 10.1 124 9-159 21-147 (153)
28 2fkb_A Putative nudix hydrolas 99.8 1.2E-19 4.1E-24 127.9 13.8 124 8-155 36-164 (180)
29 3shd_A Phosphatase NUDJ; nudix 99.8 8.1E-20 2.8E-24 125.4 11.9 120 15-155 10-130 (153)
30 1q27_A Putative nudix hydrolas 99.8 2.9E-20 1E-24 130.0 9.8 129 9-160 34-168 (171)
31 1rya_A GDP-mannose mannosyl hy 99.8 9E-20 3.1E-24 125.9 12.1 118 9-140 18-139 (160)
32 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 5.3E-20 1.8E-24 124.5 9.9 113 8-142 8-126 (139)
33 2fvv_A Diphosphoinositol polyp 99.8 1.6E-20 5.4E-25 134.2 7.3 127 8-157 39-167 (194)
34 3i9x_A MUTT/nudix family prote 99.8 3.2E-20 1.1E-24 131.8 8.9 135 8-160 26-177 (187)
35 2b0v_A Nudix hydrolase; struct 99.8 9.5E-20 3.2E-24 124.9 10.9 121 15-154 13-135 (153)
36 2azw_A MUTT/nudix family prote 99.8 5.2E-20 1.8E-24 125.5 9.5 126 8-155 17-143 (148)
37 1k2e_A Nudix homolog; nudix/MU 99.8 4.9E-20 1.7E-24 127.1 9.1 54 10-65 2-55 (156)
38 1vhz_A ADP compounds hydrolase 99.8 9.4E-20 3.2E-24 130.5 10.8 112 11-144 51-165 (198)
39 3id9_A MUTT/nudix family prote 99.8 4.5E-20 1.6E-24 129.0 8.8 117 8-142 22-138 (171)
40 2fb1_A Conserved hypothetical 99.8 1.7E-20 5.7E-25 137.0 6.4 132 8-160 12-148 (226)
41 1v8y_A ADP-ribose pyrophosphat 99.8 1.4E-19 4.7E-24 126.6 10.5 113 9-144 34-149 (170)
42 2rrk_A ORF135, CTP pyrophospho 99.8 2.9E-19 9.8E-24 120.7 11.5 120 10-156 9-131 (140)
43 1g0s_A Hypothetical 23.7 kDa p 99.8 1.9E-19 6.6E-24 130.0 11.1 119 10-145 58-185 (209)
44 3q93_A 7,8-dihydro-8-oxoguanin 99.8 1E-19 3.5E-24 128.0 9.1 112 8-141 23-136 (176)
45 3o6z_A GDP-mannose pyrophospha 99.8 2.7E-19 9.2E-24 127.5 11.2 119 9-146 45-173 (191)
46 3q91_A Uridine diphosphate glu 99.8 1.6E-19 5.5E-24 130.9 9.8 122 8-145 35-194 (218)
47 2pqv_A MUTT/nudix family prote 99.8 2.7E-20 9.3E-25 128.0 5.0 124 8-153 18-141 (154)
48 3q1p_A Phosphohydrolase (MUTT/ 99.8 6.6E-20 2.3E-24 132.0 7.1 112 9-142 68-181 (205)
49 2a6t_A SPAC19A8.12; alpha/beta 99.8 1.6E-19 5.5E-24 135.0 9.1 112 11-142 103-215 (271)
50 3gz5_A MUTT/nudix family prote 99.8 1.4E-19 4.7E-24 133.3 8.5 132 10-162 23-163 (240)
51 1mk1_A ADPR pyrophosphatase; n 99.8 4.8E-19 1.6E-23 127.7 10.6 116 10-144 44-163 (207)
52 1vk6_A NADH pyrophosphatase; 1 99.8 2E-19 6.9E-24 134.2 8.1 120 15-160 145-265 (269)
53 1nqz_A COA pyrophosphatase (MU 99.8 7.3E-19 2.5E-23 125.4 10.6 111 8-139 33-151 (194)
54 1mut_A MUTT, nucleoside tripho 99.8 7E-20 2.4E-24 122.0 4.3 105 14-142 9-116 (129)
55 3e57_A Uncharacterized protein 99.8 2.5E-19 8.6E-24 128.6 7.4 131 6-160 64-208 (211)
56 3fk9_A Mutator MUTT protein; s 99.8 6E-19 2.1E-23 125.4 9.1 122 11-155 6-127 (188)
57 2b06_A MUTT/nudix family prote 99.8 7.6E-19 2.6E-23 120.8 8.9 119 8-154 7-131 (155)
58 3o8s_A Nudix hydrolase, ADP-ri 99.8 2.9E-19 9.8E-24 128.8 6.9 110 10-142 71-182 (206)
59 3cng_A Nudix hydrolase; struct 99.8 1.3E-18 4.3E-23 123.7 9.9 101 11-137 42-144 (189)
60 2dsc_A ADP-sugar pyrophosphata 99.8 3.1E-18 1.1E-22 123.8 11.0 117 9-141 61-185 (212)
61 2qjt_B Nicotinamide-nucleotide 99.8 4.9E-18 1.7E-22 131.3 12.6 118 8-139 207-329 (352)
62 2qjo_A Bifunctional NMN adenyl 99.8 4.7E-18 1.6E-22 130.8 11.3 117 8-139 202-322 (341)
63 1x51_A A/G-specific adenine DN 99.8 1E-17 3.5E-22 115.2 11.9 121 10-157 20-148 (155)
64 2dho_A Isopentenyl-diphosphate 99.7 5.4E-17 1.8E-21 119.0 13.7 134 7-155 57-212 (235)
65 3f13_A Putative nudix hydrolas 99.7 7.9E-18 2.7E-22 117.0 8.6 53 11-65 17-69 (163)
66 3fjy_A Probable MUTT1 protein; 99.7 2.2E-17 7.4E-22 128.4 11.6 135 20-161 37-177 (364)
67 2pny_A Isopentenyl-diphosphate 99.7 5.9E-17 2E-21 119.5 13.1 136 7-156 68-224 (246)
68 2fml_A MUTT/nudix family prote 99.7 1.1E-16 3.7E-21 119.9 11.6 111 9-138 39-156 (273)
69 1q33_A Pyrophosphatase, ADP-ri 99.6 9.8E-16 3.3E-20 115.7 10.9 125 22-161 140-283 (292)
70 1u20_A U8 snoRNA-binding prote 99.6 1.4E-16 4.8E-21 115.2 5.8 105 17-139 52-165 (212)
71 3dup_A MUTT/nudix family prote 99.6 1.6E-15 5.5E-20 114.3 11.1 120 8-142 117-245 (300)
72 3fsp_A A/G-specific adenine gl 99.6 6.5E-16 2.2E-20 120.2 8.9 122 9-161 240-364 (369)
73 3qsj_A Nudix hydrolase; struct 99.6 7.3E-15 2.5E-19 107.2 9.6 60 5-64 4-91 (232)
74 2xsq_A U8 snoRNA-decapping enz 99.5 3.2E-14 1.1E-18 103.0 4.4 42 22-65 66-108 (217)
75 3rh7_A Hypothetical oxidoreduc 99.3 1.6E-11 5.3E-16 93.6 9.1 103 15-156 188-291 (321)
76 3bho_A Cleavage and polyadenyl 99.2 6E-11 2.1E-15 83.7 9.0 121 8-139 57-185 (208)
77 3kvh_A Protein syndesmos; NUDT 99.0 8.6E-11 2.9E-15 82.0 2.3 55 6-62 18-84 (214)
78 1kvd_B SMK toxin; halotolerant 42.2 42 0.0014 18.3 3.8 32 9-47 40-72 (77)
79 3t3l_A Frataxin, mitochondrial 29.4 93 0.0032 19.9 4.4 30 34-63 84-116 (129)
80 3ezw_A Glycerol kinase; glycer 22.9 1.2E+02 0.0041 24.2 4.8 56 11-67 15-74 (526)
81 1zl8_A LIN-7; heterodimer, alp 21.6 52 0.0018 17.4 1.6 12 48-59 40-51 (53)
No 1
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.96 E-value=8.7e-28 Score=167.10 Aligned_cols=158 Identities=61% Similarity=1.225 Sum_probs=114.6
Q ss_pred CCCCCCCccceeEEEEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCC
Q 030711 1 MDGLPSGYRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 80 (173)
Q Consensus 1 m~~~~~~~~~~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 80 (173)
|...+..+|.++++++++.++++||++|...+|.|.+|||++++|||+.+||+||++||||+.+..+......+..+.++
T Consensus 6 ~~~~~~~~~~~v~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 85 (165)
T 1f3y_A 6 MDSPPEGYRRNVGICLMNNDKKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFP 85 (165)
T ss_dssp CSSCCSSCCCEEEEEEECTTSCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSCCBCCCC
T ss_pred ccCCccceeeeEEEEEECCCCcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccceeeecC
Confidence 44445679999999999999999999998767899999999999999999999999999999864443333333455555
Q ss_pred cccccccccccCCccccceEEEEEEEEccCccccccC-CCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhh
Q 030711 81 PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLA-NGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPY 158 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~ 158 (173)
......+...++..+.+...++|++.+........+. +..+++|+.+++|++++++.+++.+...+.++.+++.|.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~~l~~~ 164 (165)
T 1f3y_A 86 PKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVEFKKPVYKEVLSVFAPH 164 (165)
T ss_dssp HHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCGGGHHHHHHHHHHHGGG
T ss_pred ccccccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhhhhHHHHHHHHHHhhhc
Confidence 4433223333334444445678888887654333331 11234689999999999999988765567888887777654
No 2
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.92 E-value=4e-24 Score=147.62 Aligned_cols=132 Identities=20% Similarity=0.334 Sum_probs=87.0
Q ss_pred ceeEEEEE---------ecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCC
Q 030711 10 PNVGVCLI---------NSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 80 (173)
Q Consensus 10 ~~v~~~i~---------~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 80 (173)
++++++|+ |.+.++||++|++.++.|.+|||++++|||+.+||+||++||||+.+..............+.
T Consensus 4 ra~G~iifr~~~~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 83 (155)
T 3u53_A 4 RACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYV 83 (155)
T ss_dssp CEEEEEEEEECCCSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEE
T ss_pred eEeEEEEEccccccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceeeeeEeeeeecC
Confidence 45666666 445689999998877899999999999999999999999999999854322211111111111
Q ss_pred cccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhhhh
Q 030711 81 PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 160 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (173)
... ......+|++........+.. .+|+.+++|++++++.+++. .+..+.+++.+.+++.
T Consensus 84 ~~~------------~~~~~~~~~~~~~~~~~~~~~-----~~E~~~~~W~~~~ea~~~~~---~~~~~~~L~~a~~~L~ 143 (155)
T 3u53_A 84 ARN------------KPKTVIYWLAEVKDYDVEIRL-----SHEHQAYRWLGLEEACQLAQ---FKEMKAALQEGHQFLC 143 (155)
T ss_dssp ETT------------EEEEEEEEEEEESCTTCCCCC-----CTTEEEEEEECHHHHHHHHC---SHHHHHHHHHHHHHHH
T ss_pred CCc------------ceeEEEEEEEEEeccCCccCC-----CcceeEEEEeEHHHHHHHcC---CHHHHHHHHHHHHHHh
Confidence 111 111234555555543333222 25899999999999998764 3556667776666665
Q ss_pred h
Q 030711 161 E 161 (173)
Q Consensus 161 ~ 161 (173)
+
T Consensus 144 ~ 144 (155)
T 3u53_A 144 S 144 (155)
T ss_dssp H
T ss_pred C
Confidence 5
No 3
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.91 E-value=5.8e-24 Score=143.57 Aligned_cols=124 Identities=23% Similarity=0.342 Sum_probs=77.4
Q ss_pred cceeEEEEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccccccc
Q 030711 9 RPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVN 88 (173)
Q Consensus 9 ~~~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (173)
+.+++++|+ .+++|||++|.. |.|.+|||++++|||+.+||+||++||||+.+... ..+.. ..+.++...
T Consensus 4 ~~aag~vv~-~~~~vLL~~r~~--g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~-~~l~~-~~~~~~~~~----- 73 (134)
T 3i7u_A 4 EFSAGGVLF-KDGEVLLIKTPS--NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEIL-DYIGE-IHYWYTLKG----- 73 (134)
T ss_dssp EEEEEEEEE-ETTEEEEEECTT--SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEE-EEEEEEETT-----
T ss_pred EEEEEEEEE-ECCEEEEEEeCC--CcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEe-eeeee-eeEEecCCC-----
Confidence 345555555 568999998764 78999999999999999999999999999985322 11111 111111110
Q ss_pred cccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhh
Q 030711 89 RLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRP 157 (173)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~ 157 (173)
.......++|.+..... .+.. .+|+.+++|++++++.+++. .+..+.+++.+.+
T Consensus 74 -----~~~~~~~~~f~~~~~~~--~~~~-----~~E~~~~~W~~~~e~~~~l~---~~~~r~il~~a~~ 127 (134)
T 3i7u_A 74 -----ERIFKTVKYYLMKYKEG--EPRP-----SWEVKDAKFFPIKEAKKLLK---YKGDKEIFEKALK 127 (134)
T ss_dssp -----EEEEEEEEEEEEEEEEE--CCCC-----CTTSSEEEEEEHHHHHHHBC---SHHHHHHHHHHHH
T ss_pred -----ceEEEEEEEEEEEEcCC--cCcC-----ChhheEEEEEEHHHHhhhcC---ChHHHHHHHHHHH
Confidence 00111234555554432 2221 14889999999999999764 2344444444333
No 4
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.90 E-value=8.9e-23 Score=142.21 Aligned_cols=155 Identities=39% Similarity=0.705 Sum_probs=105.4
Q ss_pred CCCCCCCccceeEEEEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhh--hhccCCccccc
Q 030711 1 MDGLPSGYRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI--IAEVPNWLTYD 78 (173)
Q Consensus 1 m~~~~~~~~~~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~--~~~~~~~~~~~ 78 (173)
|..- ..+|.+|++++++.++++||++|.. ++.|.+|||++++|||+.+||+||+.||||+.+..+ +.....+..+.
T Consensus 1 m~~~-~~~~~~v~~~i~~~~~~vLl~~r~~-~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~ 78 (164)
T 2kdv_A 1 MIDD-DGYRPNVGIVICNRQGQVMWARRFG-QHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYK 78 (164)
T ss_dssp CCCS-SSEEEEEEEEEECTTSEEEEEEETT-CCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSSCEEEE
T ss_pred CCCC-CCCCcEEEEEEEccCCEEEEEEEcC-CCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEEEEEecceeEEe
Confidence 5543 3589999999999999999999886 789999999999999999999999999999985432 22222222233
Q ss_pred CCcccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhh
Q 030711 79 FPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPY 158 (173)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~ 158 (173)
++...... .....+.++..++|++.+......+.+.. .+.+|+.+++|++++++.+.+.+.+.+.+..++..+.+.
T Consensus 79 ~~~~~~~~---~~~~~~~~~~~~~f~~~~~~~~~~~~l~~-~~~~E~~~~~W~~~~e~~~~l~~~~~~~~~~~l~~l~~~ 154 (164)
T 2kdv_A 79 LPKRLVRW---DTKPVCIGQKQKWFLLQLVSGDAEINMQT-SSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASV 154 (164)
T ss_dssp CCTTTCCT---TSSSCCCEEEEEEEEEEESSCGGGCCSCS-SSSCSEEEEEEEETTTGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cCcceeee---ccCcccccceeEEEEEEecCCccccccCC-CCCchhceEEEecHHHhhhhhhhhhHHHHHHHHHHHHHH
Confidence 33321100 00112233456778887765443333321 123589999999999988765554457888888887776
Q ss_pred hhh
Q 030711 159 LNE 161 (173)
Q Consensus 159 ~~~ 161 (173)
+..
T Consensus 155 l~~ 157 (164)
T 2kdv_A 155 VMS 157 (164)
T ss_dssp HHH
T ss_pred HhH
Confidence 654
No 5
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.88 E-value=7.7e-22 Score=134.78 Aligned_cols=135 Identities=21% Similarity=0.359 Sum_probs=88.0
Q ss_pred CCCCCCCccceeEEEEEecC-CcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhh-hccCCc----
Q 030711 1 MDGLPSGYRPNVGVCLINSD-SQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEII-AEVPNW---- 74 (173)
Q Consensus 1 m~~~~~~~~~~v~~~i~~~~-~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~-~~~~~~---- 74 (173)
|..|+...+.+|++++++.+ +++||++|...+|.|.+|||++++||++.+||+||++||||+.+.... ..+...
T Consensus 1 m~~m~~~~~~~v~~~i~~~~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~ 80 (150)
T 2o1c_A 1 MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVE 80 (150)
T ss_dssp -CCCCCBCSEEEEEEEEETTTCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEE
T ss_pred CCcccccCceEEEEEEEeCCCCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeeceee
Confidence 66665334567777888875 899999988767899999999999999999999999999999954321 111110
Q ss_pred ------ccccCCcccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHH
Q 030711 75 ------LTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTY 148 (173)
Q Consensus 75 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~ 148 (173)
..+.+++. ......++|.+...... .. ..+|+.+++|++++++.++... +..
T Consensus 81 ~~~~~~~~~~~~~~------------~~~~~~~~f~~~~~~~~-~~------~~~E~~~~~W~~~~el~~~~~~---~~~ 138 (150)
T 2o1c_A 81 FEIFSHLRHRYAPG------------VTRNTESWFCLALPHER-QI------VFTEHLAYKWLDAPAAAALTKS---WSN 138 (150)
T ss_dssp EECCGGGGGGBCTT------------CCEEEEEEEEEEESSCC-CC------CCSSSSCEEEEEHHHHHHHCSC---HHH
T ss_pred eeeecccccccCCC------------CcceEEEEEEEEcCCCC-Cc------ChhHhhccEeecHHHHHhhhcC---HHH
Confidence 01112211 01123455655554321 11 1158889999999999997653 555
Q ss_pred HHHHHHHhh
Q 030711 149 EEVMRTFRP 157 (173)
Q Consensus 149 ~~~~~~l~~ 157 (173)
..+++.+.+
T Consensus 139 ~~~l~~~~~ 147 (150)
T 2o1c_A 139 RQAIEQFVI 147 (150)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHH
Confidence 566655443
No 6
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.88 E-value=4.9e-22 Score=134.18 Aligned_cols=129 Identities=24% Similarity=0.473 Sum_probs=85.7
Q ss_pred cceeEEEEEec---CCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhc--cCCcccccCCccc
Q 030711 9 RPNVGVCLINS---DSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAE--VPNWLTYDFPPAV 83 (173)
Q Consensus 9 ~~~v~~~i~~~---~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~--~~~~~~~~~~~~~ 83 (173)
+.++++++++. ++++||++|+..++.|.+|||++++||++.+||+||++||||+.+..+... ......+.++.
T Consensus 3 ~~~~~~vi~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~-- 80 (138)
T 1ktg_A 3 VKAAGLVIYRKLAGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFYEAKG-- 80 (138)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEETT--
T ss_pred eEEEEEEEEEecCCCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEEEeCC--
Confidence 45677777765 468999998865679999999999999999999999999999974322111 11111122111
Q ss_pred ccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhhhh
Q 030711 84 KTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 160 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (173)
......+|.+...... . . .+.+|+.++.|++++++.++.. .+....+++.+.++++
T Consensus 81 ------------~~~~~~~f~~~~~~~~-~-~----~~~~e~~~~~W~~~~el~~~~~---~~~~~~~l~~~~~~l~ 136 (138)
T 1ktg_A 81 ------------KPKSVKYWLAKLNNPD-D-V----QLSHEHQNWKWCELEDAIKIAD---YAEMGSLLRKFSAFLA 136 (138)
T ss_dssp ------------EEEEEEEEEEEECSCC-C-C----CCCTTEEEEEEECHHHHHHHHC---CHHHHHHHHHHHHHHH
T ss_pred ------------CceEEEEEEEEecCCc-c-c----CCCchhcEeEeccHHHHHHhhc---cchHHHHHHHHHHHhh
Confidence 0112456666655421 1 1 1236889999999999999865 2566666666666553
No 7
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.87 E-value=1.3e-21 Score=133.91 Aligned_cols=131 Identities=22% Similarity=0.261 Sum_probs=86.7
Q ss_pred ceeEEEEE---ecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcc-----cccCCc
Q 030711 10 PNVGVCLI---NSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWL-----TYDFPP 81 (173)
Q Consensus 10 ~~v~~~i~---~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~-----~~~~~~ 81 (173)
.+|.++++ +.++++||++|.. +|.|.+|||++++|||+.+||+||++||||+.+......+.... .+.++.
T Consensus 6 ~~v~vvi~~~~~~~~~vLl~~r~~-~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 84 (149)
T 3son_A 6 FQVLVIPFIKTEANYQFGVLHRTD-ADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIPNFHFSFNK 84 (149)
T ss_dssp CEEEEEEEEECSSSEEEEEEEESS-SSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGGTCSSS
T ss_pred eEEEEEEEEecCCCeEEEEEEEcC-CCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecccceeeccCC
Confidence 45555554 4567899999887 58999999999999999999999999999998533211111100 111111
Q ss_pred ccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhhhhh
Q 030711 82 AVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 161 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (173)
. .....++|.+........+.+ .+|+.+++|++++++.++.. .+..+.++..+.+++..
T Consensus 85 ~-------------~~~~~~~f~~~~~~~~~~~~~-----~~E~~~~~W~~~~el~~~~~---~~~~~~~l~~~~~~l~~ 143 (149)
T 3son_A 85 P-------------YVVPEYCFAIDLTSCSYQVTL-----SLEHSELRWVSYESAIQLLE---WDSNKTALYELNERLKN 143 (149)
T ss_dssp C-------------SEEEEEEEEEECTTTGGGCCC-----CTTEEEEEEECHHHHHHHCC---CHHHHHHHHHHHHHHHT
T ss_pred c-------------eEeEEEEEEEEcCCCCCcccC-----CCceeeEEEeCHHHHHHHhc---CHHHHHHHHHHHHHHhh
Confidence 1 011234555555532223332 15889999999999999865 36777777777777655
Q ss_pred c
Q 030711 162 N 162 (173)
Q Consensus 162 ~ 162 (173)
+
T Consensus 144 ~ 144 (149)
T 3son_A 144 N 144 (149)
T ss_dssp T
T ss_pred c
Confidence 3
No 8
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.87 E-value=1.8e-21 Score=133.86 Aligned_cols=126 Identities=20% Similarity=0.334 Sum_probs=86.3
Q ss_pred CCccceeEEEEEecCCcEEEEEecC----CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCc
Q 030711 6 SGYRPNVGVCLINSDSQIFVASRLN----VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPP 81 (173)
Q Consensus 6 ~~~~~~v~~~i~~~~~~vLl~~r~~----~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 81 (173)
..++.+|+++|++.++++||++|.. .+|.|.+|||++++||++.+||+||+.||||+.+..... +.. ..+.++.
T Consensus 5 ~~~~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~-~~~-~~~~~~~ 82 (153)
T 3grn_A 5 KPYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDI-AGQ-VNFELTE 82 (153)
T ss_dssp SCEEEEEEEEEECTTCCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSE-EEE-EEEECSS
T ss_pred CceEEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceE-EEE-EEEecCC
Confidence 4478888889999899999999986 348999999999999999999999999999998532211 111 1122221
Q ss_pred ccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhh-hhcCchHHHHHHHHHhh
Q 030711 82 AVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA-VDYKRPTYEEVMRTFRP 157 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~-~~~~~~~~~~~~~~l~~ 157 (173)
. .....+|.+..... .... .+|+.+++|++++++.++. . .+....+++.+.+
T Consensus 83 ~--------------~~~~~~~~~~~~~~--~~~~-----~~e~~~~~W~~~~el~~~~~~---~~~~~~~l~~l~~ 135 (153)
T 3grn_A 83 K--------------KVIAIVFDGGYVVA--DVKL-----SYEHIEYSWVSLEKILGMETL---PAYFRDFFERFDR 135 (153)
T ss_dssp C--------------EEEEEEEEEEECCC--CCCC-----CTTEEEEEEECHHHHTTCSSS---CHHHHHHHHHHHH
T ss_pred c--------------eEEEEEEEEEecCC--cEec-----CCCcceEEEEEHHHhhhcccc---hHHHHHHHHHHhc
Confidence 1 01123344333322 2221 1588899999999999975 4 3666666666543
No 9
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.87 E-value=7e-22 Score=134.35 Aligned_cols=129 Identities=21% Similarity=0.333 Sum_probs=84.6
Q ss_pred ccceeEEEEEecCCcEEEEEecC---CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLN---VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVK 84 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~---~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 84 (173)
.+..+++++++.++++||++|.. ++|.|.||||++++||++.+||+||+.||||+.+............+.++.
T Consensus 7 ~~~~~~~vi~~~~~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~--- 83 (144)
T 3r03_A 7 ILLVTAAALIDPDGRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSYDT--- 83 (144)
T ss_dssp EEEEEEEEEBCTTSCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSS---
T ss_pred eeEEEEEEEEcCCCEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccCCC---
Confidence 55666777888889999999885 358999999999999999999999999999998533211111111222221
Q ss_pred cccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhhhhh
Q 030711 85 TKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 161 (173)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (173)
....+++|.+....... ...|..++.|++++++.++..+ +..+.+++.+.+....
T Consensus 84 -------------~~~~~~~~~~~~~~~~~------~~~e~~~~~W~~~~el~~~~~~---~~~~~~l~~~~~~~~~ 138 (144)
T 3r03_A 84 -------------FHLLMPLYACRSWRGRA------TAREGQTLAWVRAERLREYPMP---PADLPLIPILQDWLEG 138 (144)
T ss_dssp -------------SEEEEEEEEECCCBSCC------CCCSSCEEEEECGGGGGGSCCC---TTTTTHHHHHHHHC--
T ss_pred -------------eEEEEEEEEEEecCCcc------CCCCcceEEEEeHHHhccCCCC---cchHHHHHHHhCcccc
Confidence 12233444444322221 2257889999999999997653 4555555555555444
No 10
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.87 E-value=1.5e-21 Score=138.92 Aligned_cols=148 Identities=17% Similarity=0.214 Sum_probs=94.8
Q ss_pred ccceeEEEEEecCCcEEEEEecC----CCCeEEC-CCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCC-cccccCCc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLN----VPGAWQM-PQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPN-WLTYDFPP 81 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~----~~~~w~l-PgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~-~~~~~~~~ 81 (173)
++++|+++|++.++++||++|.. ++|.|.+ |||++++|||+.+||+||++||||+.+..+...+.. .....+++
T Consensus 31 ~~~~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 110 (190)
T 1hzt_A 31 LHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPS 110 (190)
T ss_dssp CEECEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEETTCEEEEECTT
T ss_pred eEEEEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheeeeeEEEEeeCCC
Confidence 55788888898889999999874 3689999 999999999999999999999999996443111111 11111221
Q ss_pred ccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcC---chHHHHHHHHHhhh
Q 030711 82 AVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYK---RPTYEEVMRTFRPY 158 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~---~~~~~~~~~~l~~~ 158 (173)
... ......+|.+.... .... +++|+.+++|++++++.+++.... .+.+..+++.+.+.
T Consensus 111 ~~~-----------~~~~~~~f~~~~~~---~~~~----~~~E~~~~~W~~~~el~~~~~~~~~~~~p~~~~~~~~~~~~ 172 (190)
T 1hzt_A 111 GIV-----------ENEVCPVFAARTTS---ALQI----NDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATNREAR 172 (190)
T ss_dssp SCE-----------EEEECCEEEEEBCS---CCCC----CTTTEEEEEEECHHHHHHHHHHCGGGBCHHHHHHHHSHHHH
T ss_pred CCc-----------ceEEEEEEEEecCC---CCcC----CccceeeEEEecHHHHHHHHHcChhhcCchHHHHHHHHHHH
Confidence 110 01112445554432 2222 336889999999999999865432 36667777777665
Q ss_pred hhhcCcccccccCCC
Q 030711 159 LNENGIAAKCKSAKW 173 (173)
Q Consensus 159 ~~~~~~~~~~~~~~~ 173 (173)
...++........||
T Consensus 173 ~~~~~~~~~~~~~~~ 187 (190)
T 1hzt_A 173 KRLSAFTQLKLEHHH 187 (190)
T ss_dssp HHHHHTTSCCC----
T ss_pred Hhhhhhhhhhhhccc
Confidence 555445555555554
No 11
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.86 E-value=3.2e-21 Score=138.05 Aligned_cols=144 Identities=15% Similarity=0.216 Sum_probs=82.8
Q ss_pred CccceeEEEEEecCC-cEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCccc-ccCCcccc
Q 030711 7 GYRPNVGVCLINSDS-QIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLT-YDFPPAVK 84 (173)
Q Consensus 7 ~~~~~v~~~i~~~~~-~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~-~~~~~~~~ 84 (173)
.++.++++++++.++ +|||+++.. .|.|.+|||++++|||+.+||+||++||||+....+......... +..+....
T Consensus 43 ~~h~~~~~vv~~~~~~~vLL~~r~~-~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 121 (197)
T 3fcm_A 43 IAHLTSSAFAVNKERNKFLMIHHNI-YNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDVLTVNGHIK 121 (197)
T ss_dssp SEEEEEEEEEECTTSCEEEEEEETT-TTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEEEEEECCEEE
T ss_pred CccEEEEEEEEECCCCEEEEEEecC-CCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEEEeeecCccc
Confidence 477788888888875 999999875 689999999999999999999999999999982221111111001 11111000
Q ss_pred cccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhhhhhcC
Q 030711 85 TKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNENG 163 (173)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 163 (173)
. .... ........+|++..... .... .+++|+.+++|++++++.+++.. +....+++.+.+++..+.
T Consensus 122 ~--~~~~--~~~~~~~~~~~~~~~~~-~~~~----~~~~E~~~~~W~~~~el~~~~~~---~~~~~il~~~~~~l~~~~ 188 (197)
T 3fcm_A 122 R--GKYV--SSHLHLNLTYLIECSED-ETLM----LKEDENSGVMWIPFNEISKYCSE---PHMIPIYEKLINKLKTQS 188 (197)
T ss_dssp T--TEEE--CCEEEEEEEEEEECCTT-SCCC----CCC----CEEEEEGGGHHHHCCC---GGGHHHHHHHHHHHHC--
T ss_pred c--Cccc--CCceeEEEEEEEEeCCC-cccC----CCcccccceEEccHHHHHhhcCC---HHHHHHHHHHHHHHHhcc
Confidence 0 0000 00000123444444322 1122 23368899999999999998653 344445555555555543
No 12
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.86 E-value=8.9e-21 Score=126.05 Aligned_cols=120 Identities=21% Similarity=0.313 Sum_probs=81.2
Q ss_pred ceeEEEEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccccccc
Q 030711 10 PNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNR 89 (173)
Q Consensus 10 ~~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (173)
.++++++++.++++||++|.. |.|.+|||++++|||+.+||+||+.||||+.+..... +.. ..+.++..
T Consensus 3 ~~~~~vi~~~~~~vLl~~r~~--g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~-~~~~~~~~------- 71 (126)
T 1vcd_A 3 LGAGGVVFNAKREVLLLRDRM--GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLP-LYP-TRYVNPKG------- 71 (126)
T ss_dssp EEEEEEEECTTSCEEEEECTT--SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEE-EEE-EEEECTTS-------
T ss_pred eEEEEEEEcCCCEEEEEEECC--CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccE-EeE-EEEecCCc-------
Confidence 467778888889999999876 8899999999999999999999999999998533211 111 11221110
Q ss_pred ccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhh
Q 030711 90 LWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRP 157 (173)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~ 157 (173)
.....+|.+...... . ....|+.+++|++++++.++... +....+++.+.+
T Consensus 72 -------~~~~~~~~~~~~~~~--~-----~~~~e~~~~~w~~~~el~~~~~~---~~~~~~l~~~~~ 122 (126)
T 1vcd_A 72 -------VEREVHWFLMRGEGA--P-----RLEEGMTGAGWFSPEEARALLAF---PEDLGLLEVALE 122 (126)
T ss_dssp -------CEEEEEEEEEEEESC--C-----CCCTTCCEEEEECHHHHHHHBCS---HHHHHHHHHHHH
T ss_pred -------eEEEEEEEEEEcCCC--C-----CCCcceeeeEEcCHHHHHHhhcC---hhHHHHHHHHHH
Confidence 112345555443322 1 12257889999999999997542 455555555443
No 13
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.86 E-value=4.1e-21 Score=128.95 Aligned_cols=125 Identities=23% Similarity=0.330 Sum_probs=78.5
Q ss_pred cceeEEEEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccccccc
Q 030711 9 RPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVN 88 (173)
Q Consensus 9 ~~~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (173)
..+|++++++ ++++||++|.. |.|.+|||++++|||+.+||+||++||||+.+.... .+.. ..+.++...
T Consensus 4 ~~~~~~vi~~-~~~vLl~~r~~--~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~-~~~~-~~~~~~~~~----- 73 (134)
T 2pbt_A 4 EFSAGGVLFK-DGEVLLIKTPS--NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILD-YIGE-IHYWYTLKG----- 73 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECTT--SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEE-EEEE-EEEEEEETT-----
T ss_pred ceEEEEEEEE-CCEEEEEEeCC--CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEee-eeeE-EEEEeeCCC-----
Confidence 3456667776 67999999876 899999999999999999999999999999853321 1111 111111100
Q ss_pred cccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhh
Q 030711 89 RLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPY 158 (173)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~ 158 (173)
.......++|.+..... .... . +|+.++.|++++++.++... +....++..+.+.
T Consensus 74 -----~~~~~~~~~~~~~~~~~--~~~~----~-~e~~~~~W~~~~el~~~~~~---~~~~~~l~~~~~~ 128 (134)
T 2pbt_A 74 -----ERIFKTVKYYLMKYKEG--EPRP----S-WEVKDAKFFPIKEAKKLLKY---KGDKEIFEKALKL 128 (134)
T ss_dssp -----EEEEEEEEEEEEEEEEE--CCCC----C-TTSSEEEEEEHHHHHHHCCS---HHHHHHHHHHHHH
T ss_pred -----cEEEEEEEEEEEEecCC--CcCC----C-cceeEEEEEcHHHHHhhhcc---hhHHHHHHHHHHH
Confidence 00011234444444332 2211 1 28899999999999987542 4444444444433
No 14
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.85 E-value=5.1e-21 Score=130.60 Aligned_cols=116 Identities=23% Similarity=0.230 Sum_probs=74.2
Q ss_pred ccceeEEEEEecCCcEEEEEecCCC---CeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLNVP---GAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVK 84 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~~~---~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 84 (173)
.+.+|++++++.++++||+++.+.+ +.|.+|||++++|||+.+||+||++||||+.+..+.. +..+ +..+.
T Consensus 4 ~~~~v~vi~~~~~~~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~-l~~~--~~~~~--- 77 (145)
T 2w4e_A 4 GPRAVFILPVTAQGEAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVP-LPGF--YPQPS--- 77 (145)
T ss_dssp CCEEEEEEEEETTSEEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEE-CCCB--BSCTT---
T ss_pred eCCEEEEEEEcCCCEEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEE-EecC--cCCCC---
Confidence 3457888888899999888765432 4899999999999999999999999999998543222 2111 11111
Q ss_pred cccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcC
Q 030711 85 TKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYK 144 (173)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~ 144 (173)
......++|.+..... .... .+++|+.++.|++++++.+++....
T Consensus 78 ----------~~~~~~~~f~~~~~~~-~~~~----~~~~E~~~~~w~~~~el~~~~~~~~ 122 (145)
T 2w4e_A 78 ----------ISGVVFYPLLALGVTL-GAAQ----LEDTETIERVVLPLAEVYRMLEAGE 122 (145)
T ss_dssp ----------TCCCEEEEEEEEEEEE-C------------CEEEEEEEHHHHHHHHHHTC
T ss_pred ----------ccCceEEEEEEEeccc-CCCC----CCCCCeEEEEEEeHHHHHHHHHcCC
Confidence 0111234555542221 1111 2336889999999999999876643
No 15
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.85 E-value=9e-21 Score=128.48 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=77.1
Q ss_pred cceeEEEEEecCCcEEEEEecC-----CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccc
Q 030711 9 RPNVGVCLINSDSQIFVASRLN-----VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAV 83 (173)
Q Consensus 9 ~~~v~~~i~~~~~~vLl~~r~~-----~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~ 83 (173)
...+++++.+ ++++||++|.. .+|.|.+|||++++||++.+||+||+.||||+.+.... .+.. ..+.++..
T Consensus 6 ~~~v~~vi~~-~~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~-~~~~-~~~~~~~~- 81 (140)
T 3gwy_A 6 IEVVAAVIRL-GEKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGE-KLLT-VHHTYPDF- 81 (140)
T ss_dssp EEEEEEEEEE-TTEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEE-EEEE-EECCCSSC-
T ss_pred EEEEEEEEEe-CCEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEece-EEEE-EEEEeCCc-
Confidence 3344445555 89999999985 45789999999999999999999999999999853321 1111 12222211
Q ss_pred ccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhh
Q 030711 84 KTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRP 157 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~ 157 (173)
.....+|.+..... .. ...|+.+++|++++++.++... +....+++.+.+
T Consensus 82 -------------~~~~~~f~~~~~~~--~~------~~~E~~~~~W~~~~el~~~~~~---~~~~~il~~~~~ 131 (140)
T 3gwy_A 82 -------------EITMHAFLCHPVGQ--RY------VLKEHIAAQWLSTREMAILDWA---EADKPIVRKISE 131 (140)
T ss_dssp -------------CEEEEEEEEEECCS--CC------CCCSSCEEEEECHHHHTTSCBC---GGGHHHHHHHHC
T ss_pred -------------eEEEEEEEEEecCC--cc------cccccceeEeccHHHHhhCCCC---cccHHHHHHHHh
Confidence 11234555554432 21 1257889999999999997653 455555554443
No 16
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.85 E-value=2.4e-21 Score=133.54 Aligned_cols=129 Identities=19% Similarity=0.245 Sum_probs=87.1
Q ss_pred ccceeEEEEEecCCcEEEEEecCC--CCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 85 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~~--~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (173)
....+++++++.+++|||++|.+. +|.|.+|||++++|||+.+||+||++||||+.+... ..+.. +....
T Consensus 19 ~~~~v~~~i~~~~~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~-~~~~~---~~~~~---- 90 (156)
T 3gg6_A 19 VCYVVLAVFLSEQDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPE-TLLSV---EERGP---- 90 (156)
T ss_dssp CEEEEEEECBCTTSEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE-EEEEE---EESST----
T ss_pred eEEEEEEEEEeCCCEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEee-eEEEE---EcCCC----
Confidence 445566677888999999998863 579999999999999999999999999999985322 11111 11000
Q ss_pred ccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhhhhh
Q 030711 86 KVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 161 (173)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (173)
+...++|.+........... .+++|+.++.|++++++.+++.. ..+..++..+..++..
T Consensus 91 -----------~~~~~~f~~~~~~~~~~~~~---~~~~E~~~~~W~~~~el~~~~~~---~~~~~~l~~~~~~~~~ 149 (156)
T 3gg6_A 91 -----------SWVRFVFLARPTGGILKTSK---EADAESLQAAWYPRTSLPTPLRA---HDILHLVELAAQYRQQ 149 (156)
T ss_dssp -----------TEEEEEEEEEEEEECCCCGG---GCSSSCSEEEEEETTSCCSSBSC---THHHHHHHHHHHHHHH
T ss_pred -----------CEEEEEEEEEeeCCeeccCC---CCCcceeeeEEEcHHHCcccccc---hhHHHHHHHHHHHhhc
Confidence 11235566655433222111 23368899999999999987654 4555666665555544
No 17
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.85 E-value=2.9e-20 Score=128.29 Aligned_cols=118 Identities=25% Similarity=0.363 Sum_probs=81.5
Q ss_pred ccceeEEEEEecCCcEEEEEecC------CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLN------VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPP 81 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~------~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 81 (173)
.+.+++++|++.++++||++|.+ .+|.|.+|||++++||++.+||+||+.||||+.+.... .+.. ..+.+++
T Consensus 12 ~~~~~~~vi~~~~~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~-~l~~-~~~~~~~ 89 (159)
T 1sjy_A 12 ELRAAGVVLLNERGDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVK-FLGA-YLGRFPD 89 (159)
T ss_dssp CEEEEEEEEBCTTCCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEE-EEEE-EEEECTT
T ss_pred EEEeEEEEEEeCCCCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeE-EEEE-EecccCC
Confidence 56777778888889999999985 55899999999999999999999999999999953321 1111 1111222
Q ss_pred ccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcC
Q 030711 82 AVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYK 144 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~ 144 (173)
. .....++|.+...... .+.. .+.+|+.++.|++++++.+++.+..
T Consensus 90 ~-------------~~~~~~~f~~~~~~~~-~~~~---~~~~E~~~~~W~~~~el~~~~~~~~ 135 (159)
T 1sjy_A 90 G-------------VLILRHVWLAEPEPGQ-TLAP---AFTDEIAEASFVSREDFAQLYAAGQ 135 (159)
T ss_dssp S-------------CEEEEEEEEEEECSSC-CCCC---CCCSSEEEEEEECHHHHHHHHHTTC
T ss_pred C-------------ceEEEEEEEEEccCCC-cccc---CCCCceeEEEEecHHHHHHhhhccc
Confidence 1 0112355555554322 1221 0236889999999999999877653
No 18
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.85 E-value=5.6e-21 Score=132.04 Aligned_cols=125 Identities=18% Similarity=0.296 Sum_probs=81.9
Q ss_pred ccceeEEEEEecCCcEEEEEecC---CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLN---VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVK 84 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~---~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 84 (173)
.+..+++++++.++++||++|.. ++|.|.||||++++||++.+||+||+.||||+.+............+.++..
T Consensus 28 ~~~~~~~~i~~~~~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~-- 105 (158)
T 3hhj_A 28 LLIVVACALLDQDNRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGYETF-- 105 (158)
T ss_dssp EEEEEEEEEBCTTSEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSC--
T ss_pred eEEEEEEEEEeCCCEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeeccCCc--
Confidence 44556667788889999999885 3579999999999999999999999999999985332111011112222211
Q ss_pred cccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhh
Q 030711 85 TKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRP 157 (173)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~ 157 (173)
...++++.+....... ...|..++.|++++++.++... +....+++.+.+
T Consensus 106 --------------~~~~~~~~~~~~~~~~------~~~e~~~~~W~~~~el~~~~~~---~~~~~il~~~~~ 155 (158)
T 3hhj_A 106 --------------HLLMPLYFCSHYKGVA------QGREGQNLKWIFINDLDKYPMP---EADKPLVQVLKN 155 (158)
T ss_dssp --------------EEEEEEEEESCCBSCC------CCTTSCEEEEEEGGGGGGSCCC---TTTHHHHHHHHH
T ss_pred --------------EEEEEEEEEEECCCcc------CCccccceEEEcHHHHhhCCCC---cchHHHHHHHHH
Confidence 2234444444322221 2257889999999999987653 444455544443
No 19
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.85 E-value=8.2e-21 Score=129.44 Aligned_cols=132 Identities=20% Similarity=0.398 Sum_probs=85.3
Q ss_pred ceeEEEEEecC-CcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccccccc
Q 030711 10 PNVGVCLINSD-SQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVN 88 (173)
Q Consensus 10 ~~v~~~i~~~~-~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (173)
+.++++|++.+ +++||++|.. +|.|.+|||++++|||+.+||+||++||||+.+..+... ..+....
T Consensus 5 ~~~~~~i~~~~~~~vLl~~r~~-~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~-~~~~~~~---------- 72 (146)
T 2jvb_A 5 PVRGAAIFNENLSKILLVQGTE-SDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYIDD-NQFIERN---------- 72 (146)
T ss_dssp CCEEEEEBCTTSSEEEEECCSS-SSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSCS-SCEEEEE----------
T ss_pred EEEEEEEEeCCCCEEEEEEEcC-CCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhccc-ccccccc----------
Confidence 34566777775 8999998765 689999999999999999999999999999985432111 1111100
Q ss_pred cccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhc--CchHHHHHHHHHhhhhhhc
Q 030711 89 RLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDY--KRPTYEEVMRTFRPYLNEN 162 (173)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~--~~~~~~~~~~~l~~~~~~~ 162 (173)
..+...++|++........... ...+|+.++.|++++++.+++.+. ....+...+..+..++..+
T Consensus 73 ------~~~~~~~~~~~~~~~~~~~~~~---~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 139 (146)
T 2jvb_A 73 ------IQGKNYKIFLISGVSEVFNFKP---QVRNEIDKIEWFDFKKISKTMYKSNIKYYLINSMMRPLSMWLRHQ 139 (146)
T ss_dssp ------ETTEEEEEEEECCCCSSSCCCC---CCSSSCCCEEEEEHHHHHTGGGCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ------cCCceEEEEEEEeccccccCCc---CCcchhheeEEeEHHHHHhhhcccchhhhhHHHHHHHHHHHHHHh
Confidence 0111223333332221111111 123688999999999999987653 2245566677777777653
No 20
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.84 E-value=1.1e-20 Score=130.71 Aligned_cols=139 Identities=16% Similarity=0.078 Sum_probs=82.6
Q ss_pred ccceeEEEEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCc--ccccCCccccc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNW--LTYDFPPAVKT 85 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~--~~~~~~~~~~~ 85 (173)
.+.+++++|++ +++|||++|.. +|.|.+|||++++|||+.+||+||++||||+.+... ..+..+ ..+.++.....
T Consensus 5 ~~~~v~~vi~~-~~~vLL~~r~~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~~~~~~~~~~~~~~~~ 81 (159)
T 3f6a_A 5 RHFTVSVFIVC-KDKVLLHLHKK-AKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLY-NPIDINLKKSCDLSGEKLL 81 (159)
T ss_dssp SCEEEEEEEEE-TTEEEEEECSS-SCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEEC-CCCCHHHHHHHHHTTCEEE
T ss_pred ceEEEEEEEEE-CCEEEEEEcCC-CCeEECCccCccCCCCHHHHHHHHHHHHhCCCceec-ccccccccccccccccccc
Confidence 56677777777 78999999886 789999999999999999999999999999985322 111110 00111111100
Q ss_pred c-----cccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhh
Q 030711 86 K-----VNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPY 158 (173)
Q Consensus 86 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~ 158 (173)
. ..... .........+|.+..... .... +.+|+.+++|++++++.++... ...+..+.+.+.+.
T Consensus 82 ~~p~~~~~~~~-~~~~~~~~~~f~~~~~~~--~~~~----~~~E~~~~~W~~~~el~~~~~~--~~~~~~l~~~~~~~ 150 (159)
T 3f6a_A 82 INPIHTILGDV-SPNHSHIDFVYYATTTSF--ETSP----EIGESKILKWYSKEDLKNAHNI--QENILVMATEALDL 150 (159)
T ss_dssp CCCSEEEEECS-SSSSCEEEEEEEEECSCS--CCCC----CTTSCCCEEEECSSSSTTCSSS--CHHHHHHHHHHHHH
T ss_pred cCccccccccC-CCCceEEEEEEEEEeCCC--CcCC----CCCcccceEEeeHHHHhhCcCC--ChhHHHHHHHHHHH
Confidence 0 00000 000011223455554432 2222 2368899999999999987521 24555555444443
No 21
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.84 E-value=7.2e-21 Score=131.52 Aligned_cols=125 Identities=16% Similarity=0.219 Sum_probs=80.5
Q ss_pred ccceeEEEEEecCCcEEEEEecC--CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLN--VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 85 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~--~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (173)
.+.+|+++|++ +++|||++|.+ .++.|.||||++++||++.+||+||++||||+.+.... .+.. ..+.+....
T Consensus 28 ~~~~v~~vi~~-~~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~~-~~~~~~~~~-- 102 (157)
T 4dyw_A 28 PRVGCGAAIVR-DGRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERAT-LLCV-VDHIDAANG-- 102 (157)
T ss_dssp CEEEEEEEEEE-TTEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCE-EEEE-EEEEETTTT--
T ss_pred ceeEEEEEEEE-CCEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCc-EEEE-EEeeccCCC--
Confidence 55666667777 79999999986 35899999999999999999999999999999853221 1111 111111100
Q ss_pred ccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHh
Q 030711 86 KVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 156 (173)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~ 156 (173)
......+|.+..... .... .+++|+..++|++++++.+.+. +....+++.++
T Consensus 103 ----------~~~~~~~f~~~~~~~--~~~~---~~~~E~~~~~W~~~~el~~~l~----~~~~~~l~~l~ 154 (157)
T 4dyw_A 103 ----------EHWVAPVYLAHAFSG--EPRV---VEPDRHEALGWFALDDLPQPLT----HATRIALEQVT 154 (157)
T ss_dssp ----------EEEEEEEEEESEEES--CCCC---SCTTTEEEEEEEETTSCCSSBC----HHHHHHHHHHC
T ss_pred ----------cEEEEEEEEEEEcCC--Cccc---CCCCcEeEEEEECHHHcccccC----HHHHHHHHHHH
Confidence 001123444433322 2211 1336889999999999998543 55666665554
No 22
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.84 E-value=1.5e-21 Score=134.41 Aligned_cols=117 Identities=25% Similarity=0.349 Sum_probs=73.1
Q ss_pred ccceeEEEEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCc----ccccCCccc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNW----LTYDFPPAV 83 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~----~~~~~~~~~ 83 (173)
.+.++++++++.+++|||++|. ++.|.+|||++++||++.+||+||++||||+.+.... .+..+ ..+.++...
T Consensus 20 ~~~~v~~ii~~~~~~vLL~~r~--~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~~~~~~~~~~~~~~~~~ 96 (153)
T 3eds_A 20 FXPSVAAVIKNEQGEILFQYPG--GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKK-QKGVFGGKEYRYTYSNGD 96 (153)
T ss_dssp EEEEEEEEEBCTTCCEEEECC-----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEE-EEEEECSGGGEEECTTSC
T ss_pred EeeeEEEEEEcCCCeEEEEEcC--CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeee-EEEEecccceeeecCCCC
Confidence 5667777888888999998887 7899999999999999999999999999999853221 11110 122223211
Q ss_pred ccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcC
Q 030711 84 KTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYK 144 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~ 144 (173)
. ......+|.+..... .... ..+|+.+++|++++++.++..++.
T Consensus 97 ~-----------~~~~~~~f~~~~~~~--~~~~----~~~E~~~~~W~~~~el~~l~~~~p 140 (153)
T 3eds_A 97 E-----------VEYIVVVFECEVTSG--ELRS----IDGESLKLQYFSLSEKPPLALPYP 140 (153)
T ss_dssp E-----------EEEEEEEEEEEEEEE--CCC-----------CEEEECGGGCCCBSSCCC
T ss_pred e-----------EEEEEEEEEEEecCC--cccc----CCCcEEEEEEECHHHCchhcccCc
Confidence 0 011234555544432 2222 225888999999999999876543
No 23
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.84 E-value=9.7e-21 Score=131.39 Aligned_cols=126 Identities=17% Similarity=0.237 Sum_probs=81.8
Q ss_pred CccceeEEEEEecC-CcEEEEEecC--CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccc
Q 030711 7 GYRPNVGVCLINSD-SQIFVASRLN--VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAV 83 (173)
Q Consensus 7 ~~~~~v~~~i~~~~-~~vLl~~r~~--~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~ 83 (173)
..+.++.++|++.+ ++|||++|.. +.|.|.+|||++++||++.+||+||+.||||+.+..... +.. ..+.++..
T Consensus 8 ~~~~~v~~vi~~~~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~-~~~~~~~~- 84 (161)
T 3exq_A 8 PVELVTMVMVTDPETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTF-CGT-CEWFDDDR- 84 (161)
T ss_dssp CEEEEEEEEEBCTTTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEE-EEE-EEEECSSC-
T ss_pred CceEEEEEEEEeCCCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcE-EEE-EecccCCC-
Confidence 36667777777776 7999999885 346799999999999999999999999999998532211 111 11211111
Q ss_pred ccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhh
Q 030711 84 KTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRP 157 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~ 157 (173)
+.....+++.+......+. ..|..+++|++++++.++... +....+++.+..
T Consensus 85 -------------~~~~~~~~~~~~~~~~~~~------~~e~~~~~W~~~~el~~~~~~---~~~~~~l~~~~~ 136 (161)
T 3exq_A 85 -------------QHRKLGLLYRASNFTGTLK------ASAEGQLSWLPITALTRENSA---ASLPEFLQVFTG 136 (161)
T ss_dssp -------------SSEEEEEEEEECCEESCCC------GGGTTTEEEECGGGCCTTTBC---TTHHHHHHHHTT
T ss_pred -------------CeEEEEEEEEEeccCCccC------CCccceEEEeeHHHhhhCccC---hHHHHHHHHHhh
Confidence 1123444444443222222 246788999999999987653 455555555443
No 24
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.84 E-value=2.7e-20 Score=133.41 Aligned_cols=129 Identities=23% Similarity=0.339 Sum_probs=82.1
Q ss_pred ccceeEEEEEec-CCcEEEEEecC-CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccc
Q 030711 8 YRPNVGVCLINS-DSQIFVASRLN-VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 85 (173)
Q Consensus 8 ~~~~v~~~i~~~-~~~vLl~~r~~-~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (173)
.+.+|++++++. +++|||++|.. .+|.|.+|||++++||++.+||+||++||||+.+. ....+.....+.++...
T Consensus 25 ~~v~v~~~v~~~~~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~-~~~l~~~~~~~~~~~~~-- 101 (199)
T 3h95_A 25 HQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSE-FRSVLSIRQQHTNPGAF-- 101 (199)
T ss_dssp -CCEEEEEEEETTTTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEE-EEEEEEEEECC--------
T ss_pred ccceEEEEEEeCCCCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccc-cceEEEEEeeecCCCCc--
Confidence 556677777765 48999998875 35899999999999999999999999999999953 22222211112222211
Q ss_pred ccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHh
Q 030711 86 KVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 156 (173)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~ 156 (173)
.....+|++.+......... +++|+.++.|++++++.++... .+....++..+.
T Consensus 102 -----------~~~~~~~~~~~~~~~~~~~~----~~~E~~~~~W~~~~el~~~~~~--~~~~~~~~~~~~ 155 (199)
T 3h95_A 102 -----------GKSDMYIICRLKPYSFTINF----CQEECLRCEWMDLNDLAKTENT--TPITSRVARLLL 155 (199)
T ss_dssp --------------CEEEEEEEEESCCCCCC----CTTTEEEEEEEEHHHHHHCSSB--CHHHHHHHHHHH
T ss_pred -----------eeEEEEEEEEEcCCCcccCC----CccceeeeEEEeHHHHhhhhhc--ChHHHHHHHHHH
Confidence 11235566665543333332 3468999999999999987532 245555444433
No 25
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.83 E-value=4e-20 Score=128.58 Aligned_cols=126 Identities=21% Similarity=0.378 Sum_probs=78.2
Q ss_pred ccceeEEEEEecCCcEEEEEecC----CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCC-----ccccc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLN----VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPN-----WLTYD 78 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~----~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~-----~~~~~ 78 (173)
.+..+++++++.++++||++|.. .+|.|.+|||++++||++.+||+||+.||||+.+... ..... ...+.
T Consensus 26 ~~~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~-~~~~~~~~~~~~~~~ 104 (165)
T 3oga_A 26 RQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILS-DITPWTFRDDIRIKT 104 (165)
T ss_dssp EEEEEEEEEEEETTEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEE-EEEEEEEEEEEEEEE
T ss_pred ceEEEEEEEEeCCCEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCcccc-ceeeeeeecceeeEe
Confidence 45566667778889999999885 3489999999999999999999999999999985321 11110 01123
Q ss_pred CCcccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHH
Q 030711 79 FPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMR 153 (173)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~ 153 (173)
++...... ....++++........... .+|+.+++|++++++.++... +....+++
T Consensus 105 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~-----~~E~~~~~W~~~~el~~~~~~---~~~~~~l~ 160 (165)
T 3oga_A 105 YADGRQEE-----------IYMIYLIFDCVSANRDICI-----NDEFQDYAWVKPEELALYDLN---VATRHTLA 160 (165)
T ss_dssp C--CCEEE-----------EEEEEEEEEEEESCCCCCC-----CTTEEEEEEECGGGGGGSCBC---HHHHHHHH
T ss_pred cCCCCcee-----------EEEEEEEEEeeccCCCccC-----CchheeeEEccHHHHhhCCCC---HHHHHHHH
Confidence 33322110 1122333333322222221 158889999999999997542 44444443
No 26
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.83 E-value=1.4e-20 Score=132.95 Aligned_cols=116 Identities=21% Similarity=0.225 Sum_probs=77.5
Q ss_pred cceeEEEEEecCCcEEEEEecC---CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccc
Q 030711 9 RPNVGVCLINSDSQIFVASRLN---VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 85 (173)
Q Consensus 9 ~~~v~~~i~~~~~~vLl~~r~~---~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (173)
+.+|++++++.++++||++|.+ .++.|.+|||++++|||+.+||+||+.||||+.+..+. .+..+. ..+.
T Consensus 41 ~~~v~v~i~~~~~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~l~~~~--~~~~---- 113 (182)
T 2yvp_A 41 VAASFVLPVTERGTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLI-PLPSFH--PQPS---- 113 (182)
T ss_dssp CEEEEEEEBCTTSEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEE-ECCCBC--SCTT----
T ss_pred CCEEEEEEEcCCCEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEE-EEEEEe--CCCC----
Confidence 3467778888889999999875 35799999999999999999999999999999853322 222110 0010
Q ss_pred ccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcC
Q 030711 86 KVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYK 144 (173)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~ 144 (173)
......++|.+.......... .+.+|+.++.|++++++.+++....
T Consensus 114 ---------~~~~~~~~f~~~~~~~~~~~~----~~~~E~~~~~W~~~~el~~~~~~~~ 159 (182)
T 2yvp_A 114 ---------FTAVVFHPFLALKARVVTPPT----LEEGELLESLELPLTEVYALLAKGE 159 (182)
T ss_dssp ---------TBCCEEEEEEECSCEECSCCC----CCTTCCEEEEEEEHHHHHHHHHTTC
T ss_pred ---------ccccEEEEEEEeccccCCCCC----CCCCceEEEEEEEHHHHHHHHHcCC
Confidence 011123444443221111211 2346889999999999999877653
No 27
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.83 E-value=2.1e-20 Score=128.09 Aligned_cols=124 Identities=23% Similarity=0.351 Sum_probs=82.3
Q ss_pred cceeEEEEEecCCcEEEEEecCC---CCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccc
Q 030711 9 RPNVGVCLINSDSQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 85 (173)
Q Consensus 9 ~~~v~~~i~~~~~~vLl~~r~~~---~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (173)
+..+++++++.++++||++|... +|.|.||||++++||++.+||+||+.||||+.+..... +.. ..+.++..
T Consensus 21 ~~~~~~~i~~~~~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~-~~~~~~~~--- 95 (153)
T 3ees_A 21 WIPVVAGFLRKDGKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGEL-KLA-CTHSYGDV--- 95 (153)
T ss_dssp EEEEEEEEEEETTEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCE-EEE-EEEEETTE---
T ss_pred eEEEEEEEEEECCEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCce-EEE-EEEecCCC---
Confidence 34566677788899999998863 48999999999999999999999999999998532221 111 12222221
Q ss_pred ccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhhh
Q 030711 86 KVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYL 159 (173)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~~ 159 (173)
...++++.+...... ....|+.++.|++++++.++... +....+++.+.+.+
T Consensus 96 -------------~~~~~~~~~~~~~~~------~~~~e~~~~~W~~~~el~~~~~~---~~~~~~l~~~~~~~ 147 (153)
T 3ees_A 96 -------------GILILFYEILYWKGE------PRAKHHMMLEWIHPEELKHRNIP---EANRKILHKIYKAL 147 (153)
T ss_dssp -------------EEEEEEEEECEEESC------CCCSSSSEEEEECGGGGGGSCCC---HHHHTTHHHHHHHT
T ss_pred -------------eEEEEEEEEEECCCC------cCCCccceEEEecHHHhhhCCCC---cchHHHHHHHHHhh
Confidence 122333333322212 12257889999999999987543 55566666555544
No 28
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.83 E-value=1.2e-19 Score=127.88 Aligned_cols=124 Identities=18% Similarity=0.270 Sum_probs=80.4
Q ss_pred ccceeEEEEEecCCcEEEEEecC----CCCeEEC-CCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLN----VPGAWQM-PQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPA 82 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~----~~~~w~l-PgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~ 82 (173)
.+.++++++++.++++||++|.. .+|.|.+ |||++++||++.+||+||++||||+.+..+... .. ..+....
T Consensus 36 ~~~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l-~~-~~~~~~~- 112 (180)
T 2fkb_A 36 RHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEH-GQ-FYFEDKN- 112 (180)
T ss_dssp CEEEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEEE-EE-EEEEETT-
T ss_pred eeeEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEEE-EE-EEecCCC-
Confidence 56677778888889999999874 3678999 999999999999999999999999985332221 11 1111110
Q ss_pred cccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHH
Q 030711 83 VKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 155 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l 155 (173)
.....++|.+.. ..... .+.+|+.++.|++++++.+++.+.. +....++..+
T Consensus 113 -------------~~~~~~~f~~~~---~~~~~----~~~~E~~~~~W~~~~el~~~~~~~~-~~~~~~l~~~ 164 (180)
T 2fkb_A 113 -------------CRVWGALFSCVS---HGPFA----LQEDEVSEVCWLTPEEITARCDEFT-PDSLKALALW 164 (180)
T ss_dssp -------------EEEEEEEEEEEC---CCCCC----CCTTTEEEEEEECHHHHHTTGGGBC-HHHHHHHHHH
T ss_pred -------------ceEEEEEEEEec---CCCcC----CChhHhheEEEecHHHHHHHHHHhC-CcHHHHHHHH
Confidence 011223444442 12222 2336889999999999999854222 3334444333
No 29
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.83 E-value=8.1e-20 Score=125.42 Aligned_cols=120 Identities=23% Similarity=0.385 Sum_probs=75.1
Q ss_pred EEEecCCcEEEEEecC-CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccccccccccCC
Q 030711 15 CLINSDSQIFVASRLN-VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGG 93 (173)
Q Consensus 15 ~i~~~~~~vLl~~r~~-~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (173)
++++.++++||++|.. .++.|.+|||++++|||+.+||+||++||||+.+... ..+.. ..+.++...
T Consensus 10 ~ii~~~~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~~~-~~~~~~~~~---------- 77 (153)
T 3shd_A 10 CVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQ-HFIRM-HQWIAPDKT---------- 77 (153)
T ss_dssp EEEEETTEEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCC-EEEEE-EEECCTTSC----------
T ss_pred EEEEeCCEEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccC-cEEEE-EEEecCCCc----------
Confidence 4556689999999863 3468999999999999999999999999999995332 11111 122222211
Q ss_pred ccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHH
Q 030711 94 EWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 155 (173)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l 155 (173)
.....+|.+...... ... .+.+|+.+++|++++++..... ...+.+...+..+
T Consensus 78 ---~~~~~~f~~~~~~~~-~~~----~~~~E~~~~~W~~~~el~~~~~-~~~~~~~~~l~~~ 130 (153)
T 3shd_A 78 ---PFLRFLFAIELEQIC-PTQ----PHDSDIDCCRWVSAEEILQASN-LRSPLVAESIRCY 130 (153)
T ss_dssp ---CEEEEEEEEECSSCC-CCC----CCSTTCCEEEEECHHHHHTCSC-BSSTHHHHHHHHH
T ss_pred ---eEEEEEEEEEccccC-cCC----CCcccceeeEEecHHHhhcccc-ccCchHHHHHHHH
Confidence 112345555554332 111 2336889999999999932221 1224555554443
No 30
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.83 E-value=2.9e-20 Score=130.00 Aligned_cols=129 Identities=16% Similarity=0.252 Sum_probs=83.5
Q ss_pred cceeEEEEEecCCcEEEEEecC----CCCeEE-CCCcccCCCCCHHHHHHHHHHHHhCCchhhh-hhccCCcccccCCcc
Q 030711 9 RPNVGVCLINSDSQIFVASRLN----VPGAWQ-MPQGGIEDGEDPKLAAMRELREETGIVSAEI-IAEVPNWLTYDFPPA 82 (173)
Q Consensus 9 ~~~v~~~i~~~~~~vLl~~r~~----~~~~w~-lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~~~~~~~~~~~ 82 (173)
+.++++++++.++++||++|.. ++|.|. +|||++++|||+.+||+||++||||+.+... +..+..+..+.++..
T Consensus 34 ~~~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~ 113 (171)
T 1q27_A 34 VRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPLASFSPFQTTLS 113 (171)
T ss_dssp CEEEEEEEEETTTEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEEEEECSSSSCCS
T ss_pred ceEEEEEEECCCCeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEEEEEEeccCCCCc
Confidence 6677888888999999999864 368998 9999999999999999999999999985332 111111110111110
Q ss_pred cccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhhhh
Q 030711 83 VKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 160 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (173)
...++|.+.. ...... +++|+.+++|++++++.++..+.. .....++..+..++.
T Consensus 114 ---------------~~~~~f~~~~---~~~~~~----~~~E~~~~~W~~~~el~~~~~~~~-~~~~~~~~~l~~~~~ 168 (171)
T 1q27_A 114 ---------------SFMCVYELRS---DATPIF----NPNDISGGEWLTPEHLLARIAAGE-AAKGDLAELVRRCYR 168 (171)
T ss_dssp ---------------SEEEEEEEEC---CCCCCS----CTTTCSCCEEECHHHHHHHHHHHS-SCCHHHHHHHHHHHT
T ss_pred ---------------cEEEEEEEEE---CCcccc----CchhhheEEEecHHHHHHHHhcCC-CCchhHHHHHHHHHh
Confidence 1234555544 122222 236888999999999997755432 233344444444443
No 31
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.83 E-value=9e-20 Score=125.94 Aligned_cols=118 Identities=16% Similarity=0.254 Sum_probs=75.3
Q ss_pred cceeEEEEEecCCcEEEEEecCC--CCeEECCCcccCCCCCHHHHHHHHHHHHhCCchh-hhhhccCCcccccCCccccc
Q 030711 9 RPNVGVCLINSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA-EIIAEVPNWLTYDFPPAVKT 85 (173)
Q Consensus 9 ~~~v~~~i~~~~~~vLl~~r~~~--~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~ 85 (173)
+.+|++++++.++++||++|... +|.|.+|||++++||++.+||+||++||||+.+. .....+.. ..+.++....
T Consensus 18 ~~~v~~vi~~~~~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~-~~~~~~~~~~- 95 (160)
T 1rya_A 18 LVSLDFIVENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGV-WQHFYDDNFS- 95 (160)
T ss_dssp EEEEEEEEECTTSCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEEE-EEEEESSBTT-
T ss_pred EEEEEEEEEcCCCEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEEE-EeEEEccccc-
Confidence 45777788888899999998863 5799999999999999999999999999999842 11111111 1122221100
Q ss_pred ccccccCCc-cccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhh
Q 030711 86 KVNRLWGGE-WHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQA 140 (173)
Q Consensus 86 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~ 140 (173)
+.. .......+|.+.... ..... +.+|+.+++|++++++.++.
T Consensus 96 ------~~~~~~~~~~~~f~~~~~~--~~~~~----~~~e~~~~~W~~~~el~~~~ 139 (160)
T 1rya_A 96 ------GTDFTTHYVVLGFRFRVSE--EELLL----PDEQHDDYRWLTSDALLASD 139 (160)
T ss_dssp ------BSSSCEEEEEEEEEEECCG--GGCCC----CSSSEEEEEEECHHHHHHCT
T ss_pred ------CCCcCcEEEEEEEEEEcCc--ccccc----CCCccceEEEecHHHHhhcc
Confidence 000 001123344444332 22221 23588999999999999853
No 32
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.82 E-value=5.3e-20 Score=124.48 Aligned_cols=113 Identities=23% Similarity=0.187 Sum_probs=74.7
Q ss_pred ccceeEEEEEe--cCCc--EEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccc
Q 030711 8 YRPNVGVCLIN--SDSQ--IFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAV 83 (173)
Q Consensus 8 ~~~~v~~~i~~--~~~~--vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~ 83 (173)
.+.+++++|++ .+++ +||++|...++.|.+|||++++|||+.+||+||++||||+.+... ..+. .+.++...
T Consensus 8 p~~~v~~vi~~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~---~~~~~~~~ 83 (139)
T 2yyh_A 8 PLLATDVIIRLWDGENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLH-KLMG---VYSDPERD 83 (139)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEE-EEEE---EECCTTSC
T ss_pred CeEEEEEEEEEEcCCCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccc-eEEE---EECCCCcC
Confidence 45566666665 6777 999999876666999999999999999999999999999985321 1111 12211110
Q ss_pred ccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHH--Hhhhh
Q 030711 84 KTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVV--EQAVD 142 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~--~~~~~ 142 (173)
........+|.+.... ... ..+|+.+++|++++++. ++..+
T Consensus 84 ----------~~~~~~~~~f~~~~~~---~~~-----~~~e~~~~~W~~~~el~~~~l~~~ 126 (139)
T 2yyh_A 84 ----------PRAHVVSVVWIGDAQG---EPK-----AGSDAKKVKVYRLEEIPLDKLVFD 126 (139)
T ss_dssp ----------TTSCEEEEEEEEEEES---CCC-----CCTTEEEEEEECTTSCCGGGBCTT
T ss_pred ----------CCceEEEEEEEEecCC---ccC-----CCCCcceEEEEEHHHCCHhhcCCC
Confidence 0001123456555522 111 22588899999999999 65543
No 33
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.82 E-value=1.6e-20 Score=134.19 Aligned_cols=127 Identities=20% Similarity=0.330 Sum_probs=79.7
Q ss_pred ccceeEEEEE--ecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccc
Q 030711 8 YRPNVGVCLI--NSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 85 (173)
Q Consensus 8 ~~~~v~~~i~--~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (173)
++..++++++ +.+++|||++|.+.+|.|.+|||++++||++.+||+||++||||+.+... ..+.. +.+...
T Consensus 39 ~~~~~~~vi~~~~~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~-~~l~~---~~~~~~--- 111 (194)
T 2fvv_A 39 YKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLG-RLVGI---FENQER--- 111 (194)
T ss_dssp CEEEEEEEEESSTTCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE-EEEEE---EEETTT---
T ss_pred ccccEEEEEEEECCCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccc-eEEEE---EEcCCC---
Confidence 5666666666 34689999998877789999999999999999999999999999985322 11111 111110
Q ss_pred ccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhh
Q 030711 86 KVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRP 157 (173)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~ 157 (173)
.....+|.+.+......... ...+..+++|++++++.+++.... ......+..+..
T Consensus 112 -----------~~~~~~f~~~~~~~~~~~~~----~~e~~~~~~W~~~~el~~~l~~~~-~~~~~~l~~l~~ 167 (194)
T 2fvv_A 112 -----------KHRTYVYVLIVTEVLEDWED----SVNIGRKREWFKIEDAIKVLQYHK-PVQASYFETLRQ 167 (194)
T ss_dssp -----------TEEEEEEEEEEEEECSSCHH----HHHHCCCEEEEEHHHHHHHHTTTC-HHHHHHTCC---
T ss_pred -----------ceEEEEEEEEEccccCCCCC----cccccceEEEEEHHHHHHHHhcCc-HHHHHHHHHHhh
Confidence 01234555544321111100 001346899999999999865433 556666555443
No 34
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.82 E-value=3.2e-20 Score=131.78 Aligned_cols=135 Identities=19% Similarity=0.213 Sum_probs=80.7
Q ss_pred ccceeEEEEEe--c-----CCcEEEEEec---------CCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhcc
Q 030711 8 YRPNVGVCLIN--S-----DSQIFVASRL---------NVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEV 71 (173)
Q Consensus 8 ~~~~v~~~i~~--~-----~~~vLl~~r~---------~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~ 71 (173)
.+.+|.++|+. . +++|||++|. ..+|.|.+|||++++|||+.+||+||++||||+.+..+.. +
T Consensus 26 ~~~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l 104 (187)
T 3i9x_A 26 DGYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTDIPLIP-F 104 (187)
T ss_dssp SEEEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCSCCCEE-E
T ss_pred ccceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCCcceEE-E
Confidence 34556655553 2 3589999993 3568999999999999999999999999999998533221 1
Q ss_pred CCcccccCCcccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhh-cCchHHHH
Q 030711 72 PNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVD-YKRPTYEE 150 (173)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~-~~~~~~~~ 150 (173)
. .+..+.... .......+|.+.+......... ..+|+.+++|++++++.++... ....++..
T Consensus 105 ~---~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~----~~~E~~~~~W~~~~el~~~~l~~~~~~il~~ 167 (187)
T 3i9x_A 105 G---VFDKPGRDP----------RGWIISRAFYAIVPPEALEKRA----AGDDAAEIGLFPMTEALELPLAFDHLDMLKK 167 (187)
T ss_dssp E---EECCTTSST----------TSSEEEEEEEEECCHHHHHHHH----HSTTTTTEEEEEHHHHTTSCBSTTHHHHHHH
T ss_pred E---EEcCCccCC----------CCCEEEEEEEEEEcCcccCCcC----CCCceeEEEEEeHHHcccCCCCccHHHHHHH
Confidence 1 111111100 0011234455544432211111 1257889999999999975332 22245555
Q ss_pred HHHHHhhhhh
Q 030711 151 VMRTFRPYLN 160 (173)
Q Consensus 151 ~~~~l~~~~~ 160 (173)
+++.++....
T Consensus 168 a~~~l~~~~~ 177 (187)
T 3i9x_A 168 AFSAITEEFL 177 (187)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhhhh
Confidence 5555554443
No 35
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.82 E-value=9.5e-20 Score=124.95 Aligned_cols=121 Identities=17% Similarity=0.172 Sum_probs=76.5
Q ss_pred EEEecCCcEEEEEecCC--CCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccccccccccC
Q 030711 15 CLINSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWG 92 (173)
Q Consensus 15 ~i~~~~~~vLl~~r~~~--~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (173)
++++.++++||++|... ++.|.+|||++++||++.+||+||++||||+.+... ..+.. ..+.++....
T Consensus 13 ~ii~~~~~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~-~~~~~~~~~~-------- 82 (153)
T 2b0v_A 13 AVIEQDDKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPE-VLTGI-YHWTCASNGT-------- 82 (153)
T ss_dssp EECEETTEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEE-EEEEE-EEEEETTTTE--------
T ss_pred EEEeeCCEEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccc-eEEEE-EEEeCCCCCc--------
Confidence 44567799999998863 468999999999999999999999999999985322 11111 1122221000
Q ss_pred CccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHH
Q 030711 93 GEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRT 154 (173)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~ 154 (173)
.....+|.+....... .. ...+|+.++.|++++++.++......+.+..++..
T Consensus 83 ----~~~~~~f~~~~~~~~~-~~----~~~~e~~~~~W~~~~el~~~~~~~~~~~~~~~l~~ 135 (153)
T 2b0v_A 83 ----TYLRFTFSGQVVSFDP-DR----KLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIED 135 (153)
T ss_dssp ----EEEEEEEEEEEEEECT-TS----CCCTTEEEEEEEEHHHHHHTGGGBSSTHHHHHHHH
T ss_pred ----EEEEEEEEEEeCCCCC-CC----CCCCCeeeEEEecHHHHhhhhcccCcHHHHHHHHH
Confidence 0112344444432211 01 12358889999999999997433334555555543
No 36
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.82 E-value=5.2e-20 Score=125.54 Aligned_cols=126 Identities=17% Similarity=0.163 Sum_probs=78.5
Q ss_pred ccceeEEEEEec-CCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccccc
Q 030711 8 YRPNVGVCLINS-DSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTK 86 (173)
Q Consensus 8 ~~~~v~~~i~~~-~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 86 (173)
.+.+++++|++. ++++||++|. +|.|.+|||++++||++.+||+||+.||||+.+... ..+.....+.++...
T Consensus 17 ~~~~~~~vi~~~~~~~vLl~~r~--~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~~~~~~~~~~~--- 90 (148)
T 2azw_A 17 TRYAAYIIVSKPENNTMVLVQAP--NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIG-CYLGEADEYFYSNHR--- 90 (148)
T ss_dssp ECCEEEEECEEGGGTEEEEEECT--TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEEEEEEEEETTT---
T ss_pred eeeEEEEEEECCCCCeEEEEEcC--CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEee-eEEEEEEEEEcCCCC---
Confidence 455677777776 6899999974 489999999999999999999999999999985322 111111111111110
Q ss_pred cccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHH
Q 030711 87 VNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 155 (173)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l 155 (173)
........++|.+..... ... ..+|+.++.|++++++.+++.. ...+.+++.+
T Consensus 91 ------~~~~~~~~~~~~~~~~~~--~~~-----~~~e~~~~~W~~~~el~~~~~~---~~~~~~l~~~ 143 (148)
T 2azw_A 91 ------QTAYYNPGYFYVANTWRQ--LSE-----PLERTNTLHWVAPEEAVRLLKR---GSHRWAVEKW 143 (148)
T ss_dssp ------TEEEEEEEEEEEEEEEEE--CSS-----CC-CCSEEEEECHHHHHHHBSC---HHHHHHHHHH
T ss_pred ------CcceEEEEEEEEEEcCcC--CcC-----CCCceeeEEEeeHHHHHhhhcc---hhHHHHHHHH
Confidence 000011234444444321 111 1246789999999999998653 4555555443
No 37
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.82 E-value=4.9e-20 Score=127.13 Aligned_cols=54 Identities=30% Similarity=0.475 Sum_probs=47.4
Q ss_pred ceeEEEEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchh
Q 030711 10 PNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (173)
Q Consensus 10 ~~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~ 65 (173)
.+++++|++ ++++||++|.. +|.|.+|||++++|||+.+||+||+.||||+.+.
T Consensus 2 ~~~~~vi~~-~~~vLL~~r~~-~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~ 55 (156)
T 1k2e_A 2 IVTSGVLVE-NGKVLLVKHKR-LGVYIYPGGHVEHNETPIEAVKREFEEETGIVVE 55 (156)
T ss_dssp EEEEEECEE-TTEEEEEECTT-TCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEE
T ss_pred eEEEEEEEE-CCEEEEEEEcC-CCcEECCeeecCCCCCHHHHHHHHHHHHHCCcce
Confidence 356666776 89999999876 6899999999999999999999999999999853
No 38
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.82 E-value=9.4e-20 Score=130.54 Aligned_cols=112 Identities=19% Similarity=0.170 Sum_probs=73.9
Q ss_pred eeEEEEEecCCcEEEEEecCC---CCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccccc
Q 030711 11 NVGVCLINSDSQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKV 87 (173)
Q Consensus 11 ~v~~~i~~~~~~vLl~~r~~~---~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (173)
+|++++++++ ++||+++.+. ++.|++|||++++||++.+||+||+.||||+.+..+...... . ..+.
T Consensus 51 av~vl~~~~~-~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~-~--~~~~------ 120 (198)
T 1vhz_A 51 AVMIVPIVDD-HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKL-S--MAPS------ 120 (198)
T ss_dssp EEEEEEEETT-EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEE-E--CCTT------
T ss_pred EEEEEEEECC-EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEEEEEE-e--CCCC------
Confidence 5555567766 9999987653 358999999999999999999999999999985432221111 1 0111
Q ss_pred ccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcC
Q 030711 88 NRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYK 144 (173)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~ 144 (173)
......++|++...... ... .+++|...+.|++++++.+++....
T Consensus 121 -------~~~~~~~~f~a~~~~~~-~~~----~~~~E~~~~~w~~~~el~~~~~~~~ 165 (198)
T 1vhz_A 121 -------YFSSKMNIVVAQDLYPE-SLE----GDEPEPLPQVRWPLAHMMDLLEDPD 165 (198)
T ss_dssp -------TCCCEEEEEEEEEEEEC-CCC----CCCSSCCCEEEEEGGGGGGGGGCTT
T ss_pred -------ccCcEEEEEEEEeCCcc-cCC----CCCCceEEEEEEEHHHHHHHHHcCC
Confidence 11112345555543221 111 2346888999999999999887653
No 39
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.82 E-value=4.5e-20 Score=129.02 Aligned_cols=117 Identities=23% Similarity=0.318 Sum_probs=72.8
Q ss_pred ccceeEEEEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccccc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKV 87 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (173)
++..|++++++ ++++||++|...+|.|.+|||++++||++.+||+||++||||+.+. ....+. .+.++....
T Consensus 22 ~~~~v~~ii~~-~~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~---~~~~~~~~~--- 93 (171)
T 3id9_A 22 MQVRVTGILIE-DEKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVK-IKKLLY---VCDKPDASP--- 93 (171)
T ss_dssp CEEEEEEEEEE-TTEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEE-EEEEEE---EEEETTSSS---
T ss_pred eEEEEEEEEEE-CCEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccc-cceEEE---EEcccCCCC---
Confidence 55566666665 6899999988767899999999999999999999999999999952 211111 111111100
Q ss_pred ccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhh
Q 030711 88 NRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVD 142 (173)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~ 142 (173)
.....+|.+.......... ....+.+|+.++.|++++++.++...
T Consensus 94 ---------~~~~~~~~~~~~~~~~~~~-~~~~~~~E~~~~~w~~~~el~~~~~~ 138 (171)
T 3id9_A 94 ---------SLLHITFLLERIEGEITLP-SNEFDHNPIHDVQMVPINELSYYGFS 138 (171)
T ss_dssp ---------CEEEEEEEEEEC--------------CCCCCEEEEETGGGGGGTCC
T ss_pred ---------cEEEEEEEEEEcCCcccCC-ccCCCcCeeeeEEEEeHHHHhhCCCC
Confidence 0112344444433221111 11124468899999999999998543
No 40
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.81 E-value=1.7e-20 Score=137.02 Aligned_cols=132 Identities=13% Similarity=0.134 Sum_probs=85.4
Q ss_pred ccceeEEEEE---ecCCcEEEEEecCC--CCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcc
Q 030711 8 YRPNVGVCLI---NSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPA 82 (173)
Q Consensus 8 ~~~~v~~~i~---~~~~~vLl~~r~~~--~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~ 82 (173)
.+.+|+++|+ +.+++|||++|... +|.|.+|||++++|||+.+||+||+.||||+.+..+.. +. .+..+..
T Consensus 12 p~v~v~~vi~~~~~~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~-l~---~~~~~~r 87 (226)
T 2fb1_A 12 FYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQ-VG---AFGAIDR 87 (226)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEE-EE---EECCTTS
T ss_pred CeEEEEEEEEEEeCCCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEE-EE---EeCCCCc
Confidence 3456666766 44679999999863 47899999999999999999999999999998542211 11 1211111
Q ss_pred cccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhhhh
Q 030711 83 VKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 160 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (173)
.. .......+|.+.+..... .. +.+|+.++.|++++++.++..++. .++...++.++..+.
T Consensus 88 ~~----------~~~~v~~~y~a~~~~~~~--~~----~~~e~~~~~W~~~~el~~l~~dh~-~il~~a~~rlr~~~~ 148 (226)
T 2fb1_A 88 DP----------GERVVSIAYYALININEY--DR----ELVQKHNAYWVNINELPALIFDHP-EMVDKAREMMKQKAS 148 (226)
T ss_dssp SS----------SSCEEEEEEEEECCTTSS--CH----HHHHHTTEEEEETTSCCCBSTTHH-HHHHHHHHHHHHHHH
T ss_pred CC----------CceEEEEEEEEEecCccc--cc----CCccccceEEEEHHHhhhccCCHH-HHHHHHHHHHHhhcc
Confidence 00 001123455555543221 11 125788999999999998776542 566666666665443
No 41
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.81 E-value=1.4e-19 Score=126.60 Aligned_cols=113 Identities=27% Similarity=0.452 Sum_probs=73.0
Q ss_pred cceeEEEEEecCCcEEEEEecC---CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccc
Q 030711 9 RPNVGVCLINSDSQIFVASRLN---VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 85 (173)
Q Consensus 9 ~~~v~~~i~~~~~~vLl~~r~~---~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (173)
+.+|++++++ ++++||+++.+ .++.|.+|||++++|||+.+||+||+.||||+ +..+... ..+ +..+.
T Consensus 34 ~~~v~vii~~-~~~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~l-~~~--~~~~~---- 104 (170)
T 1v8y_A 34 KPAVAVIALR-EGRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTYL-FSY--FVSPG---- 104 (170)
T ss_dssp CCEEEEEEEE-TTEEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEEE-EEE--ESCTT----
T ss_pred CCeEEEEEEE-CCEEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCceee-EEE--ecCCC----
Confidence 4477777888 89999998765 34789999999999999999999999999999 5433221 111 11111
Q ss_pred ccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcC
Q 030711 86 KVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYK 144 (173)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~ 144 (173)
......++|.+..... .... .+++|+.++.|++++++.+++....
T Consensus 105 ---------~~~~~~~~f~~~~~~~-~~~~----~~~~E~~~~~W~~~~el~~~~~~~~ 149 (170)
T 1v8y_A 105 ---------FTDEKTHVFLAENLKE-VEAH----PDEDEAIEVVWMRPEEALERHQRGE 149 (170)
T ss_dssp ---------TBCCEEEEEEEEEEEE-CC------------CEEEEECHHHHHHHHHTTS
T ss_pred ---------ccccEEEEEEEEeccc-cCCC----CCCCceEEEEEEEHHHHHHHHHCCC
Confidence 0111234555554321 1111 2336889999999999999877654
No 42
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.81 E-value=2.9e-19 Score=120.71 Aligned_cols=120 Identities=24% Similarity=0.359 Sum_probs=76.3
Q ss_pred ceeEEEEEecCCcEEEEEecC---CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccccc
Q 030711 10 PNVGVCLINSDSQIFVASRLN---VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTK 86 (173)
Q Consensus 10 ~~v~~~i~~~~~~vLl~~r~~---~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 86 (173)
..++++|++.++++||++|.. .+|.|.+|||++++||++.+||+||+.||||+.+... ..+.. ..+.++..
T Consensus 9 ~~~~~~ii~~~~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~~-~~~~~~~~---- 82 (140)
T 2rrk_A 9 IEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVG-EYVAS-HQREVSGR---- 82 (140)
T ss_dssp EEEEEEEEEETTEEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECC-EEEEE-EEEEETTE----
T ss_pred ceEEEEEEEcCCEEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecc-cEEEE-EEEecCCc----
Confidence 445555667889999999865 3589999999999999999999999999999985322 11111 11222211
Q ss_pred cccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHh
Q 030711 87 VNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 156 (173)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~ 156 (173)
....++|.+.... ... ...|+.++.|++++++.++..+ +....+++.+.
T Consensus 83 ----------~~~~~~~~~~~~~--~~~------~~~e~~~~~W~~~~el~~~~~~---~~~~~~l~~~~ 131 (140)
T 2rrk_A 83 ----------IIHLHAWHVPDFH--GTL------QAHEHQALVWCSPEEALQYPLA---PADIPLLEAFM 131 (140)
T ss_dssp ----------EEEEEEEEESEEE--ECC------CCSSCSCEEEECHHHHTTSCCC---TTHHHHHHHHH
T ss_pred ----------EEEEEEEEEEeeC--CCc------CCCccceeEEeCHHHHhhCCCC---hhHHHHHHHHH
Confidence 0012333333221 111 1247788999999999997653 33444544443
No 43
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.81 E-value=1.9e-19 Score=129.97 Aligned_cols=119 Identities=15% Similarity=0.122 Sum_probs=76.7
Q ss_pred ceeEEEEEe-cCCcEEEEEecCC--------CCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCC
Q 030711 10 PNVGVCLIN-SDSQIFVASRLNV--------PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 80 (173)
Q Consensus 10 ~~v~~~i~~-~~~~vLl~~r~~~--------~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 80 (173)
.+|++++++ .++++||+++.+. ++.|++|||++++||++.+||+||+.||||+.+..+...... +..+
T Consensus 58 ~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~l~~~---~~~~ 134 (209)
T 1g0s_A 58 HAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSF---LASP 134 (209)
T ss_dssp CEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEEEEEE---ESCT
T ss_pred CEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEEeEEE---ecCC
Confidence 466777777 4689999887653 357999999999999999999999999999986433222111 1112
Q ss_pred cccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCc
Q 030711 81 PAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKR 145 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~ 145 (173)
. ......++|++.......... ....+++|...+.|++++++.+++.....
T Consensus 135 g-------------~~~~~~~~f~a~~~~~~~~~~-~~~~~e~E~~~~~w~~~~el~~~i~~g~i 185 (209)
T 1g0s_A 135 G-------------GTSERSSIMVGEVDATTASGI-HGLADENEDIRVHVVSREQAYQWVEEGKI 185 (209)
T ss_dssp T-------------TBCCEEEEEEEECCGGGCC---------CCSCEEEEEEHHHHHHHHHTTSS
T ss_pred C-------------ccCcEEEEEEEEEccccccCC-CCCCCCCcEEEEEEEEHHHHHHHHHcCCC
Confidence 1 111234566665432211100 00124467889999999999999876543
No 44
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.81 E-value=1e-19 Score=128.02 Aligned_cols=112 Identities=14% Similarity=0.237 Sum_probs=73.5
Q ss_pred ccceeEEEEEecCCcEEEEEecC--CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLN--VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 85 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~--~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (173)
.+..+++++++.++++||++|.+ .+|.|.+|||++++||++.+||+||++||||+.+..+.. +.. ..+.++...
T Consensus 23 ~~~~~~~~vi~~~~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l~~-~~~~~~~~~-- 98 (176)
T 3q93_A 23 ASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHK-VGQ-IVFEFVGEP-- 98 (176)
T ss_dssp CEEEEEEEEEECSSEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEE-EEE-EEEEETTCS--
T ss_pred CCcEEEEEEEEeCCEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEE-EEE-EEEEcCCCC--
Confidence 44556667778889999999876 358999999999999999999999999999999532221 111 112221110
Q ss_pred ccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhh
Q 030711 86 KVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAV 141 (173)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 141 (173)
.....++|.+........ ..|...++|++++++.++..
T Consensus 99 ------------~~~~~~~f~~~~~~~~~~------~~e~~~~~W~~~~el~~~~~ 136 (176)
T 3q93_A 99 ------------ELMDVHVFCTDSIQGTPV------ESDEMRPCWFQLDQIPFKDM 136 (176)
T ss_dssp ------------CEEEEEEEEESCEESCCC------CCSSEEEEEEETTCCCGGGB
T ss_pred ------------cEEEEEEEEEECCCCCcC------CCcceeeEEeeHHHcccccc
Confidence 012334444432222211 24567789999999998754
No 45
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.81 E-value=2.7e-19 Score=127.49 Aligned_cols=119 Identities=15% Similarity=0.175 Sum_probs=76.5
Q ss_pred cceeEEEEEec-CCcEEEEEecC---------CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCccccc
Q 030711 9 RPNVGVCLINS-DSQIFVASRLN---------VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYD 78 (173)
Q Consensus 9 ~~~v~~~i~~~-~~~vLl~~r~~---------~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~ 78 (173)
+.+|++++++. ++++||+++.+ .++.|++|||+++ ||++.+||+||+.||||+.+..+...... +.
T Consensus 45 ~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~~l~~~---~~ 120 (191)
T 3o6z_A 45 GNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVRKLFEL---YM 120 (191)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEEEEEEE---ES
T ss_pred CCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcEEEEEEE---Ee
Confidence 34677777775 58999998875 4568999999999 99999999999999999996433222111 11
Q ss_pred CCcccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCch
Q 030711 79 FPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRP 146 (173)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~ 146 (173)
.+. ......++|++...... ........ ++|+.++.|++++++.+++......
T Consensus 121 ~~~-------------~~~~~~~~f~~~~~~~~-~~~~~~~~-~~E~~~~~w~~~~el~~~~~~g~i~ 173 (191)
T 3o6z_A 121 SPG-------------GVTELIHFFIAEYSDNQ-RANAGGGV-EDEAIEVLELPFSQALEMIKTGEIR 173 (191)
T ss_dssp CTT-------------TBCCEEEEEEEECCTTC-C---------CCSSEEEEEEHHHHHHHHHHSSCC
T ss_pred CCC-------------ccCcEEEEEEEEEcccc-cccCCCCC-CCcEEEEEEEEHHHHHHHHHcCCCC
Confidence 111 11223456666654321 11100111 3688999999999999998765443
No 46
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.80 E-value=1.6e-19 Score=130.94 Aligned_cols=122 Identities=18% Similarity=0.152 Sum_probs=78.2
Q ss_pred ccceeEEEEEec-CCcEEEEEecC---C-------------------------------CCeEECCCcccCC-CCCHHHH
Q 030711 8 YRPNVGVCLINS-DSQIFVASRLN---V-------------------------------PGAWQMPQGGIED-GEDPKLA 51 (173)
Q Consensus 8 ~~~~v~~~i~~~-~~~vLl~~r~~---~-------------------------------~~~w~lPgG~ie~-gE~~~~a 51 (173)
.+.+|++++++. ++++||+++.+ + ++.|++|||++++ |||+.+|
T Consensus 35 ~~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPgG~ve~~gEs~~ea 114 (218)
T 3q91_A 35 THDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAGLVDQPGLSLEEV 114 (218)
T ss_dssp CCCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECEEEECCSSSCCHHHH
T ss_pred cCCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECCcceeCCCCCCHHHH
Confidence 356788888884 58899998765 2 4689999999999 9999999
Q ss_pred HHHHHHHHhCCch--hhhhhccCCcccccCCcccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceee
Q 030711 52 AMRELREETGIVS--AEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWK 129 (173)
Q Consensus 52 a~RE~~EEtGl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~ 129 (173)
|+||+.||||+.+ ..+.......... .+.....++|++...............+++|+.++.
T Consensus 115 A~REl~EEtGl~~~~~~l~~l~~~~~~~----------------g~~~~~~~~f~a~~~~~~~~~~~~~~~d~~E~~ev~ 178 (218)
T 3q91_A 115 ACKEAWEECGYHLAPSDLRRVATYWSGV----------------GLTGSRQTMFYTEVTDAQRSGPGGGLVEEGELIEVV 178 (218)
T ss_dssp HHHHHHHHHCBCCCGGGCEEEEEEEEC-------------------CCEEEEEEEEEECGGGBCC---------CCEEEE
T ss_pred HHHHHHHHhCCccccCceEEEEEEecCC----------------CccceEEEEEEEEECCcccccCCCCCCCCCcEEEEE
Confidence 9999999999985 3332222111111 111223456666655321100001123457899999
Q ss_pred EeCHHHHHHhhhhcCc
Q 030711 130 WASPEEVVEQAVDYKR 145 (173)
Q Consensus 130 W~~~~e~~~~~~~~~~ 145 (173)
|++++++.+++.....
T Consensus 179 wv~l~el~~~i~~g~i 194 (218)
T 3q91_A 179 HLPLEGAQAFADDPDI 194 (218)
T ss_dssp EEEGGGHHHHHHCTTS
T ss_pred EEEHHHHHHHHHcCCC
Confidence 9999999999876543
No 47
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.80 E-value=2.7e-20 Score=128.00 Aligned_cols=124 Identities=14% Similarity=0.211 Sum_probs=77.0
Q ss_pred ccceeEEEEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccccc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKV 87 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (173)
++.+++++|++ ++++||++| +|.|.+|||++++||++.+||+||++||||+.+..... +.. ..+.++...
T Consensus 18 ~~~~~~~ii~~-~~~vLl~~r---~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~~~-~~~~~~~~~---- 87 (154)
T 2pqv_A 18 FGVRATALIVQ-NHKLLVTKD---KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQL-AFV-VENRFEVDG---- 87 (154)
T ss_dssp EEEEEEECCEE-TTEEEEEEE---TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEE-EEE-EEEEEEETT----
T ss_pred EeEEEEEEEEE-CCEEEEEec---CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceE-EEE-EeeeecCCC----
Confidence 56666666665 689999998 68999999999999999999999999999998532111 111 111111100
Q ss_pred ccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHH
Q 030711 88 NRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMR 153 (173)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~ 153 (173)
........+|.+........ .. .+.+|+.++.|++++++.++... ......++.
T Consensus 88 ------~~~~~~~~~f~~~~~~~~~~-~~---~~~~e~~~~~W~~~~el~~~~~~--~~~~~~~l~ 141 (154)
T 2pqv_A 88 ------VSYHNIEFHYLVDLLEDAPL-TM---QEDEKRQPCEWIDLDKLQNIQLV--PVFLKTALP 141 (154)
T ss_dssp ------EEEEEEEEEEEEEESSCCCS-EE---EETTEEEEEEEEEGGGGGGSCEE--STTHHHHTT
T ss_pred ------CcceEEEEEEEEEecCCCCc-cc---CCCCceeeEEEeEHHHHhhcCcC--cHHHHHHhh
Confidence 00011234555555432211 11 12247889999999999986443 244444443
No 48
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.80 E-value=6.6e-20 Score=132.01 Aligned_cols=112 Identities=15% Similarity=0.257 Sum_probs=72.4
Q ss_pred cceeEEEEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcc--cccCCcccccc
Q 030711 9 RPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWL--TYDFPPAVKTK 86 (173)
Q Consensus 9 ~~~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~--~~~~~~~~~~~ 86 (173)
+.+|.++|++ +++|||++|.. +|.|.+|||++++|||+.+||+||++||||+.+... ..+.... .+.++....
T Consensus 68 ~~~v~~vv~~-~~~vLLv~r~~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~-~~l~~~~~~~~~~~~~~~-- 142 (205)
T 3q1p_A 68 KVDIRAVVFQ-NEKLLFVKEKS-DGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHF-KLLAIFDKEKHQPSPSAT-- 142 (205)
T ss_dssp EEEEEEEEEE-TTEEEEEEC----CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEE-EEEEEEEHHHHSCCCCSS--
T ss_pred cceEEEEEEE-CCEEEEEEEcC-CCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccc-eEEEEEeccccCCCCCCc--
Confidence 3456667776 78999999874 689999999999999999999999999999985321 1111111 111111111
Q ss_pred cccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhh
Q 030711 87 VNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVD 142 (173)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~ 142 (173)
.....+|.+..... .+.. .+|+.++.|+++++++++...
T Consensus 143 ----------~~~~~~~~~~~~~~--~~~~-----~~E~~~~~w~~~~el~~l~~~ 181 (205)
T 3q1p_A 143 ----------HVYKIFIGCEIIGG--EKKT-----SIETEEVEFFGENELPNLSIA 181 (205)
T ss_dssp ----------CEEEEEEEEEEEEE--CCCC-----CTTSCCEEEECTTSCCCBCTT
T ss_pred ----------eEEEEEEEEEecCC--ccCC-----CCcceEEEEEeHHHhhhcCCC
Confidence 11234555555432 2211 158899999999999987654
No 49
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.80 E-value=1.6e-19 Score=135.01 Aligned_cols=112 Identities=18% Similarity=0.327 Sum_probs=71.5
Q ss_pred eeEEEEEec-CCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccccccc
Q 030711 11 NVGVCLINS-DSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNR 89 (173)
Q Consensus 11 ~v~~~i~~~-~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (173)
.+++++++. +++|||++|.+.++.|.+|||++++|||+.+||+||++||||+.+..+... . .|...
T Consensus 103 ~v~avv~~~~~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~~~-~-----~~~~~------- 169 (271)
T 2a6t_A 103 VRGAIMLDMSMQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRINP-N-----EFIDM------- 169 (271)
T ss_dssp EEEEEEBCSSSSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTCCT-T-----CEEEE-------
T ss_pred eEEEEEEECCCCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCceeeeee-e-----eeccC-------
Confidence 455566665 489999999877789999999999999999999999999999996442211 1 11110
Q ss_pred ccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhh
Q 030711 90 LWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVD 142 (173)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~ 142 (173)
...+...++|++........... .+.+|+..++|++++++.++...
T Consensus 170 ----~~~~~~~~~f~~~~~~~~~~~~~---~~~~E~~~~~W~~~~el~~~~~~ 215 (271)
T 2a6t_A 170 ----TIRGQNVRLYIIPGISLDTRFES---RTRKEISKIEWHNLMDLPTFKKN 215 (271)
T ss_dssp ----EETTEEEEEEEECCCCTTCCCC---------EEEEEEEEGGGSTTCC--
T ss_pred ----CcCCceEEEEEEEEecCcccCCC---CCccceeEEEEEEHHHHHHHHhc
Confidence 00111234555544322211121 13368999999999999987543
No 50
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.80 E-value=1.4e-19 Score=133.31 Aligned_cols=132 Identities=18% Similarity=0.248 Sum_probs=83.6
Q ss_pred ceeEEEEE---ecCCcEEEEEecCC--CCeEECCCcccCC--CCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcc
Q 030711 10 PNVGVCLI---NSDSQIFVASRLNV--PGAWQMPQGGIED--GEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPA 82 (173)
Q Consensus 10 ~~v~~~i~---~~~~~vLl~~r~~~--~~~w~lPgG~ie~--gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~ 82 (173)
.+|.++|+ +.+++|||++|... +|.|.+|||++++ |||+.+||+||++||||+.+..+. .+. .+..+..
T Consensus 23 v~v~~vi~~~~~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~-~l~---~~~~~~r 98 (240)
T 3gz5_A 23 LTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIE-QLC---TVGNNSR 98 (240)
T ss_dssp EEEEEEEEEEETTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEE-EEE---EEEESSS
T ss_pred cEEEEEEEEEeCCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCcee-eEE---EeCCCcc
Confidence 45656665 33468999998863 4789999999999 999999999999999999853322 211 1111111
Q ss_pred cccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHH--hhhhcCchHHHHHHHHHhhhhh
Q 030711 83 VKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVE--QAVDYKRPTYEEVMRTFRPYLN 160 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~--~~~~~~~~~~~~~~~~l~~~~~ 160 (173)
.. ......++|.+.+........ .+|+.++.|++++++.+ +..++ ..++...++.++..+.
T Consensus 99 ~~----------~~~~~~~~y~a~~~~~~~~~~------~~e~~~~~W~~~~el~~~~l~~dh-~~il~~a~~rlr~kl~ 161 (240)
T 3gz5_A 99 DA----------RGWSVTVCYTALMSYQACQIQ------IASVSDVKWWPLADVLQMPLAFDH-LQLIEQARERLTQKAL 161 (240)
T ss_dssp ST----------TSCEEEEEEEEECCHHHHHHH------HTTCTTEEEEEHHHHTTSCCSTTH-HHHHHHHHHHHHHHHH
T ss_pred CC----------CceEEEEEEEEEecccccCCC------CCcccceEEecHHHcccCCcchhH-HHHHHHHHHHHHHhcc
Confidence 00 001123555555543321111 14788999999999985 33433 2567777777766554
Q ss_pred hc
Q 030711 161 EN 162 (173)
Q Consensus 161 ~~ 162 (173)
-.
T Consensus 162 y~ 163 (240)
T 3gz5_A 162 YS 163 (240)
T ss_dssp HC
T ss_pred cC
Confidence 43
No 51
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.79 E-value=4.8e-19 Score=127.68 Aligned_cols=116 Identities=18% Similarity=0.318 Sum_probs=74.0
Q ss_pred ceeEEEEEecCCcEEEEEecCC---CCeEECCCcccC-CCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccc
Q 030711 10 PNVGVCLINSDSQIFVASRLNV---PGAWQMPQGGIE-DGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 85 (173)
Q Consensus 10 ~~v~~~i~~~~~~vLl~~r~~~---~~~w~lPgG~ie-~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (173)
.+|++++++.++++||+++.+. ++.|.||||+++ +||++.+||+||+.||||+.+..+.. +..+ +.++...
T Consensus 44 ~av~v~i~~~~~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~--~~~~~~~-- 118 (207)
T 1mk1_A 44 GAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQV-LVDL--DTAPGFS-- 118 (207)
T ss_dssp CEEEEEECCTTSEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEE-EEEE--CSCTTTB--
T ss_pred CEEEEEEEcCCCEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEE-EEEE--EcCCCcc--
Confidence 4666777888899999988753 368999999999 99999999999999999998543221 1111 2222111
Q ss_pred ccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcC
Q 030711 86 KVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYK 144 (173)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~ 144 (173)
....++|++.......... ..++.|+..+.|++++++.+++....
T Consensus 119 -----------~~~~~~f~~~~~~~~~~~~---~~~~~E~~~~~Wv~~~el~~~~~~~~ 163 (207)
T 1mk1_A 119 -----------DESVRVYLATGLREVGRPE---AHHEEADMTMGWYPIAEAARRVLRGE 163 (207)
T ss_dssp -----------CCCEEEEEEEEEEECCC-------------CEEEEEHHHHHHHHHTTS
T ss_pred -----------ccEEEEEEEEccccCCCCC---CCCCCceEEEEEEEHHHHHHHHHcCC
Confidence 1123556555433211111 12346889999999999999987653
No 52
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.79 E-value=2e-19 Score=134.17 Aligned_cols=120 Identities=19% Similarity=0.267 Sum_probs=82.2
Q ss_pred EEEecCCcEEEEEecCC-CCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccccccccccCC
Q 030711 15 CLINSDSQIFVASRLNV-PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGG 93 (173)
Q Consensus 15 ~i~~~~~~vLl~~r~~~-~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (173)
++++.+++|||++|... +|.|++|||++|+|||+++||+||++||||+.+..+..... ..+.++..
T Consensus 145 v~v~~~~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~~~~--~~~~~~~~----------- 211 (269)
T 1vk6_A 145 VAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS--QPWPFPQS----------- 211 (269)
T ss_dssp EEEEETTEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEEEEE--EEEETTEE-----------
T ss_pred EEEEeCCEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEEEEE--EecCCCCE-----------
Confidence 45566799999999864 48999999999999999999999999999999543322111 12223221
Q ss_pred ccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhhhh
Q 030711 94 EWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLN 160 (173)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (173)
...+|.+..... .+.. +.+|+.+++|++++++..+..+ ..+...+++.+...++
T Consensus 212 -----~~~~f~a~~~~~--~~~~----~~~E~~~~~W~~~~el~~l~~~--~si~~~li~~~l~~~r 265 (269)
T 1vk6_A 212 -----LMTAFMAEYDSG--DIVI----DPKELLEANWYRYDDLPLLPPP--GTVARRLIEDTVAMCR 265 (269)
T ss_dssp -----EEEEEEEEEEEC--CCCC----CTTTEEEEEEEETTSCCSCCCT--TSHHHHHHHHHHHHHH
T ss_pred -----EEEEEEEEECCC--CcCC----CCcceEEEEEEEHHHhhhcccC--cHHHHHHHHHHHHHHH
Confidence 234555555432 2222 2368899999999999886543 3566666666555544
No 53
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.79 E-value=7.3e-19 Score=125.35 Aligned_cols=111 Identities=22% Similarity=0.309 Sum_probs=74.0
Q ss_pred ccceeEEEEEecCC--cEEEEEecC----CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCc
Q 030711 8 YRPNVGVCLINSDS--QIFVASRLN----VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPP 81 (173)
Q Consensus 8 ~~~~v~~~i~~~~~--~vLl~~r~~----~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 81 (173)
.+.++++++++.++ ++||++|.. .+|.|.+|||++++||++.+||+||++||||+.+..+...... .+.+..
T Consensus 33 ~~~~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~--~~~~~~ 110 (194)
T 1nqz_A 33 YRRAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLLGEL--DDVFTP 110 (194)
T ss_dssp CEEEEEEEEEESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEEEEEC--CCEEET
T ss_pred CceEEEEEEEecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceEEEEEc--cCccCC
Confidence 55666667677777 899999874 4689999999999999999999999999999985432211111 011000
Q ss_pred ccccccccccCCccccceEEEEEEEEccCccc-cccCCCCCCcccceeeEeCHHHH-HHh
Q 030711 82 AVKTKVNRLWGGEWHGQAQKWFLMKLTNDESE-INLANGEADPEFAEWKWASPEEV-VEQ 139 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~E~~~~~W~~~~e~-~~~ 139 (173)
.+...++|++..... .. .. .+.+|+.++.|++++++ .+.
T Consensus 111 --------------~~~~~~~f~~~~~~~-~~~~~----~~~~E~~~~~W~~~~el~~~~ 151 (194)
T 1nqz_A 111 --------------VGFHVTPVLGRIAPE-ALDTL----RVTPEVAQIITPTLAELRAVP 151 (194)
T ss_dssp --------------TTEEEEEEEEEECGG-GGGGC----CCCTTEEEEECCBHHHHHHSC
T ss_pred --------------CCeEEEEEEEEecCC-ccccC----CCccceeEEEEEEHHHhccCC
Confidence 011235566655422 11 12 23368899999999999 664
No 54
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.78 E-value=7e-20 Score=122.03 Aligned_cols=105 Identities=27% Similarity=0.393 Sum_probs=71.1
Q ss_pred EEEEecCCcEEEEEecCC---CCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccccccccc
Q 030711 14 VCLINSDSQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRL 90 (173)
Q Consensus 14 ~~i~~~~~~vLl~~r~~~---~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (173)
+++++.++++||++|... +|.|.+|||++++||++.+||.||+.||||+.+... ..+.. ..+.++...
T Consensus 9 ~ii~~~~~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~-~~~~~-~~~~~~~~~------- 79 (129)
T 1mut_A 9 GIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHF-SLFEK-LEYEFPDRH------- 79 (129)
T ss_dssp EECEETTTEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEE-CCCCC-CBCCCSSCE-------
T ss_pred EEEEecCCEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccc-eEEEE-EEEecCCce-------
Confidence 355678899999998863 589999999999999999999999999999985322 11211 122222211
Q ss_pred cCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhh
Q 030711 91 WGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVD 142 (173)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~ 142 (173)
....+|.+..... .. ..+|+.++.|++++++.++..+
T Consensus 80 -------~~~~~~~~~~~~~--~~------~~~e~~~~~W~~~~el~~~~~~ 116 (129)
T 1mut_A 80 -------ITLWFWLVERWEG--EP------WGKEGQPGEWMSLVGLNADDFP 116 (129)
T ss_dssp -------EECCCEEEEECSS--CC------CCCSSCCCEEEESSSCCTTTSC
T ss_pred -------EEEEEEEEEccCC--cc------CCcccceeEEeCHHHcccccCC
Confidence 0123444444322 11 1247788999999999987653
No 55
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.78 E-value=2.5e-19 Score=128.64 Aligned_cols=131 Identities=11% Similarity=0.132 Sum_probs=79.0
Q ss_pred CCccceeEEEEEecCCcEEEEEecCCC------CeEEC-CCcccCCCCC------HHHHHHHHHHHHhCCchhhhhhccC
Q 030711 6 SGYRPNVGVCLINSDSQIFVASRLNVP------GAWQM-PQGGIEDGED------PKLAAMRELREETGIVSAEIIAEVP 72 (173)
Q Consensus 6 ~~~~~~v~~~i~~~~~~vLl~~r~~~~------~~w~l-PgG~ie~gE~------~~~aa~RE~~EEtGl~~~~~~~~~~ 72 (173)
..++..+..+|+..++++||++|...+ |.|++ |||++|+||| +.+||+||++||||+.+... ..++
T Consensus 64 ~~~~q~i~~~II~~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~~-~~ig 142 (211)
T 3e57_A 64 ETTKQVIPYVVIMDGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLREL-EFLG 142 (211)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEE-EEEE
T ss_pred CcccceEEEEEEEECCEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeecc-EEEE
Confidence 347778888888889999999997533 67999 9999999998 49999999999999974322 1111
Q ss_pred Cccccc-CCcccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHH
Q 030711 73 NWLTYD-FPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEV 151 (173)
Q Consensus 73 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~ 151 (173)
. ..+. ++.... ....+|.+... . ..+. .+|..+++|++++++.++..... ...+-+
T Consensus 143 ~-~~~~~~~~~~~-------------~l~~~f~~~~~--~--g~~~----~~E~~~~~W~~~~eL~~~~~~le-~wS~lv 199 (211)
T 3e57_A 143 L-INSSTTEVSRV-------------HLGALFLGRGK--F--FSVK----EKDLFEWELIKLEELEKFSGVME-GWSKIS 199 (211)
T ss_dssp E-EECCSSHHHHT-------------EEEEEEEEEEE--E--EEES----CTTTCEEEEEEHHHHHHHGGGCC-HHHHHH
T ss_pred E-EeccCCCCCeE-------------EEEEEEEEEeC--C--ceeC----CCCeEEEEEEEHHHHHHhHhhcc-chhHHH
Confidence 1 1111 111100 01123444433 1 2221 24778999999999999744321 334444
Q ss_pred HHHHhhhhh
Q 030711 152 MRTFRPYLN 160 (173)
Q Consensus 152 ~~~l~~~~~ 160 (173)
++.+.++++
T Consensus 200 l~~l~~~~~ 208 (211)
T 3e57_A 200 AAVLLNLFL 208 (211)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHh
Confidence 455544443
No 56
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.78 E-value=6e-19 Score=125.38 Aligned_cols=122 Identities=20% Similarity=0.226 Sum_probs=73.0
Q ss_pred eeEEEEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccccccccc
Q 030711 11 NVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRL 90 (173)
Q Consensus 11 ~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (173)
.++++| ..+++|||++|.. +|.|.+|||++++||++.+||+||+.||||+.+..... +.. ..+.+....
T Consensus 6 v~~~vi-~~~~~vLL~~r~~-~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~-~~~~~~~~~------- 74 (188)
T 3fk9_A 6 VTNCIV-VDHDQVLLLQKPR-RGWWVAPGGKMEAGESILETVKREYWEETGITVKNPEL-KGI-FSMVIFDEG------- 74 (188)
T ss_dssp EEEEEE-EETTEEEEEECTT-TCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEE-EEE-EEEEEEETT-------
T ss_pred EEEEEE-EECCEEEEEEeCC-CCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceE-EEE-EEEEecCCC-------
Confidence 344444 4578999999865 78999999999999999999999999999998532211 111 111111100
Q ss_pred cCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHH
Q 030711 91 WGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTF 155 (173)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l 155 (173)
........++|.+......... ..+...+.|++++++.++... +....+++.+
T Consensus 75 ----~~~~~~~~~~f~a~~~~~~~~~-----~~e~~~~~W~~~~el~~~~l~---~~~~~~l~~~ 127 (188)
T 3fk9_A 75 ----KIVSEWMLFTFKATEHEGEMLK-----QSPEGKLEWKKKDEVLELPMA---AGDKWIFKHV 127 (188)
T ss_dssp ----EEEEEEEEEEEEESCEESCCCS-----EETTEEEEEEEGGGGGGSCCC---HHHHHHHHHH
T ss_pred ----cceEEEEEEEEEEECCCCCCcC-----CCCCEeEEEEEHHHhhhCCCC---HHHHHHHHHH
Confidence 0000113344444322222111 134568999999999986442 4444444443
No 57
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.78 E-value=7.6e-19 Score=120.78 Aligned_cols=119 Identities=16% Similarity=0.158 Sum_probs=71.8
Q ss_pred ccceeEEEEEecCCc----EEEEEecC--CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCc
Q 030711 8 YRPNVGVCLINSDSQ----IFVASRLN--VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPP 81 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~----vLl~~r~~--~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 81 (173)
.+.+++++|++ +++ +||++|.. ++| |.+|||++++|||+.+||+||+.||||+.+... ..+.. ..+.+..
T Consensus 7 ~~~~~~~ii~~-~~~~~~~vLl~~r~~~~~~g-w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~-~~~~~~~ 82 (155)
T 2b06_A 7 TILTNICLIED-LETQRVVMQYRAPENNRWSG-YAFPGGHVENDEAFAESVIREIYEETGLTIQNP-QLVGI-KNWPLDT 82 (155)
T ss_dssp EEEEEEEEEEE-TTTTEEEEEEEC-----CCE-EECCCCBCCTTSCHHHHHHHHHHHHHSEEEESC-EEEEE-EEEECTT
T ss_pred cEEEEEEEEEE-CCCCeEEEEEEECCCCCCCC-EeccceecCCCCCHHHHHHHHHHHHhCccccCC-cEEEE-EeeccCC
Confidence 55666666666 566 88888775 345 899999999999999999999999999985322 11111 1111111
Q ss_pred ccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHH
Q 030711 82 AVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRT 154 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~ 154 (173)
. .....+++.+....... ...|+.+++|++++++.++... .....+++.
T Consensus 83 ~---------------~~~~~~~~~~~~~~~~~------~~~e~~~~~W~~~~el~~~~~~---~~~~~~l~~ 131 (155)
T 2b06_A 83 G---------------GRYIVICYKATEFSGTL------QSSEEGEVSWVQKDQIPNLNLA---YDMLPLMEM 131 (155)
T ss_dssp S---------------CEEEEEEEEECEEEECC------CCBTTBEEEEEEGGGGGGSCBC---TTHHHHHHH
T ss_pred C---------------ceEEEEEEEEEecCCCC------CCCcceeeEEeeHHHhhhCCCC---hhHHHHHHH
Confidence 0 01223333333211111 1247789999999999997654 344444443
No 58
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.78 E-value=2.9e-19 Score=128.78 Aligned_cols=110 Identities=15% Similarity=0.255 Sum_probs=71.9
Q ss_pred ceeEEEEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcc--cccCCccccccc
Q 030711 10 PNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWL--TYDFPPAVKTKV 87 (173)
Q Consensus 10 ~~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~--~~~~~~~~~~~~ 87 (173)
.+|.++|++ +++|||++|. ++.|.+|||++++|||+.+||+||++||||+.+..... +.... .+.++...
T Consensus 71 ~~v~~vv~~-~~~vLLvrr~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~~~~~~~~~~~~---- 142 (206)
T 3o8s_A 71 LDTRAAIFQ-EDKILLVQEN--DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRV-VAILDKHKNNPAKSA---- 142 (206)
T ss_dssp EEEEEEEEE-TTEEEEEECT--TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEE-EEEEEHHHHCC--------
T ss_pred ccEEEEEEE-CCEEEEEEec--CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeE-EEEEeccccCCCCCC----
Confidence 455556666 5899999988 78999999999999999999999999999998532211 11110 11111111
Q ss_pred ccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhh
Q 030711 88 NRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVD 142 (173)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~ 142 (173)
......+|.+..... .+.. .+|+.++.|++++++.++...
T Consensus 143 --------~~~~~~~~~~~~~~~--~~~~-----~~E~~~~~w~~~~el~~l~~~ 182 (206)
T 3o8s_A 143 --------HRVTKVFILCRLLGG--EFQP-----NSETVASGFFSLDDLPPLYLG 182 (206)
T ss_dssp ---------CEEEEEEEEEEEEE--CCCC-----CSSCSEEEEECTTSCCCBCTT
T ss_pred --------ceEEEEEEEEEecCC--eecC-----CCCceEEEEEeHHHhhhccCC
Confidence 011234455544432 2111 158899999999999988654
No 59
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.78 E-value=1.3e-18 Score=123.74 Aligned_cols=101 Identities=23% Similarity=0.266 Sum_probs=69.5
Q ss_pred eeEEEEEecCCcEEEEEecCC--CCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccccccc
Q 030711 11 NVGVCLINSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVN 88 (173)
Q Consensus 11 ~v~~~i~~~~~~vLl~~r~~~--~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (173)
++++++++ +++|||++|... ++.|.+|||++++|||+.+||+||++||||+.+.. ...+. .+.++..
T Consensus 42 ~v~~ii~~-~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~-~~~~~---~~~~~~~------ 110 (189)
T 3cng_A 42 IVGCIPEW-ENKVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEI-RELYA---VYSLPHI------ 110 (189)
T ss_dssp EEEEEEEE-TTEEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEE-EEEEE---EEEEGGG------
T ss_pred EEEEEEEe-CCEEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCcccc-ceeEE---EEecCCC------
Confidence 45555555 789999999863 57899999999999999999999999999998532 11111 1222211
Q ss_pred cccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHH
Q 030711 89 RLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVV 137 (173)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~ 137 (173)
....++|.+..... ... ..+|+.++.|++++++.
T Consensus 111 --------~~~~~~f~~~~~~~--~~~-----~~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 111 --------SQVYMLFRAKLLDL--DFF-----PGIESLEVRLFGEQEIP 144 (189)
T ss_dssp --------TEEEEEEEEEECCS--CCC-----CCTTEEEEEEECTTTCC
T ss_pred --------cEEEEEEEEEeCCC--ccC-----CCccceeEEEECHHHcC
Confidence 11235555555432 211 12588899999999998
No 60
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.77 E-value=3.1e-18 Score=123.83 Aligned_cols=117 Identities=23% Similarity=0.271 Sum_probs=74.3
Q ss_pred cceeEEEEEecC----CcEEEEEecCC---CCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCc
Q 030711 9 RPNVGVCLINSD----SQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPP 81 (173)
Q Consensus 9 ~~~v~~~i~~~~----~~vLl~~r~~~---~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 81 (173)
+.+|+++.+..+ +++||+++.+. ++.|++|||++++||++.+||+||++||||+.+... ..+..+ +..+
T Consensus 61 ~~av~v~~v~~~~~~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~-~~l~~~--~~~~- 136 (212)
T 2dsc_A 61 ADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIA-ECSPAV--CMDP- 136 (212)
T ss_dssp CSEEEEEEEEECTTSCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEE-EECCCE--ESCT-
T ss_pred CCEEEEEEEEeCCCCCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccce-EEeccE--EcCC-
Confidence 346666544333 47999887553 358999999999999999999999999999985322 111111 1111
Q ss_pred ccccccccccCCccccceEEEEEEEEccCccc-cccCCCCCCcccceeeEeCHHHHHHhhh
Q 030711 82 AVKTKVNRLWGGEWHGQAQKWFLMKLTNDESE-INLANGEADPEFAEWKWASPEEVVEQAV 141 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 141 (173)
.+.....++|++.+...... .......+++|+..+.|++++++.+++.
T Consensus 137 ------------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 137 ------------GLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp ------------TTBCCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred ------------CccCceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 11122345666665432211 1001123457899999999999999876
No 61
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.77 E-value=4.9e-18 Score=131.33 Aligned_cols=118 Identities=21% Similarity=0.221 Sum_probs=76.6
Q ss_pred ccceeEEEEEecCCcEEEEEecCC--CCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhh--hhccCCcccccCCccc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI--IAEVPNWLTYDFPPAV 83 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~~--~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~--~~~~~~~~~~~~~~~~ 83 (173)
.+.+++++|+ .++++||++|... +|.|.+|||++++|||+.+||+||++||||+.+... ...+.....+.++...
T Consensus 207 ~~~~v~~vv~-~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~~~~~~~ 285 (352)
T 2qjt_B 207 NFVTVDALVI-VNDHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFDYPDRS 285 (352)
T ss_dssp EEEEEEEEEE-ETTEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEECCTTSC
T ss_pred CceEEEEEEE-ECCEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEecCCCCC
Confidence 3455666666 6789999999864 478999999999999999999999999999985322 1111111223333321
Q ss_pred ccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCH-HHHHHh
Q 030711 84 KTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASP-EEVVEQ 139 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~-~e~~~~ 139 (173)
... ....++|++.+......... .+.+|+.+++|+++ +++.++
T Consensus 286 ~~~----------~~~~~~f~~~~~~~~~~~~~---~~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 286 VRG----------RTISHVGLFVFDQWPSLPEI---NAADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp TTS----------EEEEEEEEEEECSCSSCCCC---CCCTTEEEEEEEESSHHHHHT
T ss_pred CCc----------cEEEEEEEEEEeCCCCCCcc---CCCccceEEEEecHHHHHHhh
Confidence 100 01234566665433211111 12368899999999 999986
No 62
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.76 E-value=4.7e-18 Score=130.83 Aligned_cols=117 Identities=16% Similarity=0.214 Sum_probs=72.3
Q ss_pred ccceeEEEEEecCCcEEEEEecCC--CCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhh--hhccCCcccccCCccc
Q 030711 8 YRPNVGVCLINSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI--IAEVPNWLTYDFPPAV 83 (173)
Q Consensus 8 ~~~~v~~~i~~~~~~vLl~~r~~~--~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~--~~~~~~~~~~~~~~~~ 83 (173)
.+.+|+++|+ .++++||++|... +|.|.+|||++++|||+.+||+||++||||+.+... ...+.....+.++...
T Consensus 202 ~~~~v~~vi~-~~~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 280 (341)
T 2qjo_A 202 TFITTDAVVV-QAGHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSIVDSHVFDAPGRS 280 (341)
T ss_dssp CEEEEEEEEE-ETTEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEECCTTSC
T ss_pred CceEEEEEEE-eCCEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccccccccccceEEEeCCCCC
Confidence 3456666666 5789999998863 478999999999999999999999999999985332 2111111233333221
Q ss_pred ccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHh
Q 030711 84 KTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQ 139 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~ 139 (173)
.. .....++|++....... ... .+.+|+.+++|++++++.++
T Consensus 281 ~~----------~~~~~~~f~~~~~~~~~-~~~---~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 281 LR----------GRTITHAYFIQLPGGEL-PAV---KGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp TT----------SCEEEEEEEEECCSSSC-CCC---C------CEEEEEHHHHHHT
T ss_pred CC----------CcEEEEEEEEEecCCCc-Ccc---CCCCceeeEEEeeHHHHhhh
Confidence 00 01123456665543221 111 23368899999999999996
No 63
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.76 E-value=1e-17 Score=115.22 Aligned_cols=121 Identities=19% Similarity=0.322 Sum_probs=75.7
Q ss_pred ceeEEEEEec---CCcEEEEEecC---CCCeEECCCcccCCCCCHH-HHHHHHHHHHhC-CchhhhhhccCCcccccCCc
Q 030711 10 PNVGVCLINS---DSQIFVASRLN---VPGAWQMPQGGIEDGEDPK-LAAMRELREETG-IVSAEIIAEVPNWLTYDFPP 81 (173)
Q Consensus 10 ~~v~~~i~~~---~~~vLl~~r~~---~~~~w~lPgG~ie~gE~~~-~aa~RE~~EEtG-l~~~~~~~~~~~~~~~~~~~ 81 (173)
..+.++|.+. ++++||++|.. .+|.|+||||.+++||++. +||+||+.|||| +.+... ..+.. ..+.|++
T Consensus 20 ~~~~~vi~~~~~~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~-~~l~~-~~~~~~~ 97 (155)
T 1x51_A 20 SSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHL-RHLGE-VVHTFSH 97 (155)
T ss_dssp EEEEEEEEEECSSSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTC-EECCC-BCCBCSS
T ss_pred EEEEEEEEecCCCCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeee-eecce-EEEecCC
Confidence 3444455554 57999999875 3479999999999999996 999999999999 774221 11111 1222222
Q ss_pred ccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhh
Q 030711 82 AVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRP 157 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~ 157 (173)
.. ....+|.+..... ... ..|..++.|++++++.++..+ ..+..+++.+..
T Consensus 98 ~~--------------~~~~~~~~~~~~~--~~~------~~e~~~~~W~~~~el~~~~~~---~~~~~~l~~~~~ 148 (155)
T 1x51_A 98 IK--------------LTYQVYGLALEGQ--TPV------TTVPPGARWLTQEEFHTAAVS---TAMKKVFRVYQG 148 (155)
T ss_dssp CE--------------EEEEEEEEECSSC--CCC------CCCCTTEEEEEHHHHHHSCCC---HHHHHHHHHHHH
T ss_pred cc--------------EEEEEEEEEEcCC--CCC------CCCCCccEEccHHHhhhcCCC---HHHHHHHHHHHh
Confidence 11 0123444433321 111 135678999999999987553 556666655443
No 64
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.74 E-value=5.4e-17 Score=118.97 Aligned_cols=134 Identities=21% Similarity=0.336 Sum_probs=84.0
Q ss_pred CccceeEEEEEecCCcEEEEEecC----CCCeEECC-CcccCCC------CC---HHHHHHHHHHHHhCCchhhhh-hcc
Q 030711 7 GYRPNVGVCLINSDSQIFVASRLN----VPGAWQMP-QGGIEDG------ED---PKLAAMRELREETGIVSAEII-AEV 71 (173)
Q Consensus 7 ~~~~~v~~~i~~~~~~vLl~~r~~----~~~~w~lP-gG~ie~g------E~---~~~aa~RE~~EEtGl~~~~~~-~~~ 71 (173)
.+++++++++++.++++||++|.. +||.|.+| ||++++| |+ +.+||+||+.||||+.+..+. ..+
T Consensus 57 ~~h~av~v~v~~~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l 136 (235)
T 2dho_A 57 LLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEI 136 (235)
T ss_dssp CCEEEEEEEEECTTCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGS
T ss_pred ceEEEEEEEEEcCCCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhhc
Confidence 478889999999999999999874 57899999 5999999 88 499999999999999853221 001
Q ss_pred CCcccccCCcccccccccccCCccc-cceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhh------cC
Q 030711 72 PNWLTYDFPPAVKTKVNRLWGGEWH-GQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVD------YK 144 (173)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~------~~ 144 (173)
.....+.|..... ..+. ....++|.+..+ ..+. ++++|+.+++|++++++.+++.. ..
T Consensus 137 ~~l~~~~y~~~~~--------~~~~~~e~~~vf~~~~~---~~~~----~~~~Ev~~~~wv~~~el~~~l~~~~~~~~~f 201 (235)
T 2dho_A 137 NYLTRIHYKAQSD--------GIWGEHEIDYILLVRMN---VTLN----PDPNEIKSYCYVSKEELKELLKKAASGEIKI 201 (235)
T ss_dssp EEEEEEEEEEECS--------SSBEEEEEEEEEEEECC---CCCC----CCTTTEEEEEEECHHHHHHHHHHHHTTSSCB
T ss_pred EEEEEEEEeccCC--------CccceeEEEEEEEEEEC---CCCc----CChHHEEEEEEEcHHHHHHHHhhccCCCcEE
Confidence 1111111111000 0000 111233444332 2222 23469999999999999997654 22
Q ss_pred chHHHHHHHHH
Q 030711 145 RPTYEEVMRTF 155 (173)
Q Consensus 145 ~~~~~~~~~~l 155 (173)
.+.+..+++.+
T Consensus 202 tp~~~~i~~~~ 212 (235)
T 2dho_A 202 TPWFKIIAATF 212 (235)
T ss_dssp CHHHHHHHHHT
T ss_pred CHhHHHHHHHH
Confidence 25555555554
No 65
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.74 E-value=7.9e-18 Score=117.00 Aligned_cols=53 Identities=28% Similarity=0.469 Sum_probs=43.7
Q ss_pred eeEEEEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchh
Q 030711 11 NVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (173)
Q Consensus 11 ~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~ 65 (173)
.+++++++.++++||++|. +|.|.+|||++++|||+.+||+||+.||||+.+.
T Consensus 17 ~~~~~ii~~~~~vLL~~r~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~ 69 (163)
T 3f13_A 17 RRATAIIEMPDGVLVTASR--GGRYNLPGGKANRGELRSQALIREIREETGLRIN 69 (163)
T ss_dssp EEEEEECEETTEEEEEECC-----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCC
T ss_pred EEEEEEEEeCCEEEEEEEC--CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccc
Confidence 4444566677899999886 5899999999999999999999999999999953
No 66
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.73 E-value=2.2e-17 Score=128.41 Aligned_cols=135 Identities=17% Similarity=0.243 Sum_probs=79.0
Q ss_pred CCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCcccccccccccCCccccce
Q 030711 20 DSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGGEWHGQA 99 (173)
Q Consensus 20 ~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (173)
+.+|||++|.. .|.|.||||++++|||+.+||+||++||||+.+... ..+. ...+.++...... .+...+......
T Consensus 37 ~~~vLLv~r~~-~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~-~~l~-~~~~~~~~~g~~~-~~~~~~~~~~~~ 112 (364)
T 3fjy_A 37 SIEVCIVHRPK-YDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLG-PYLC-EVEYPLSEEGKKT-RHSHDCTADTKH 112 (364)
T ss_dssp TEEEEEEEETT-TTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEE-EEEE-EEC----------------------C
T ss_pred ceEEEEEEcCC-CCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeec-cccc-eEEEeccCCCccc-ccccccccCceE
Confidence 34899999865 589999999999999999999999999999985322 1111 1122222110000 000000011234
Q ss_pred EEEEEEEEccCccc------cccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhhhhh
Q 030711 100 QKWFLMKLTNDESE------INLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 161 (173)
Q Consensus 100 ~~~~~~~~~~~~~~------~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (173)
.++|.+........ +......+++|+.+++|++++++.+++. .+..+.+++.+.+.+..
T Consensus 113 ~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~---~~~~r~il~~~~~~l~~ 177 (364)
T 3fjy_A 113 TLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILS---HSTDKDTLAVFVDRVQE 177 (364)
T ss_dssp EEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCS---CHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhc---chhhHHHHHHHHHHhcc
Confidence 56676666543211 1111123447899999999999999865 25556666666665543
No 67
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.73 E-value=5.9e-17 Score=119.48 Aligned_cols=136 Identities=21% Similarity=0.295 Sum_probs=84.7
Q ss_pred CccceeEEEEEecCCcEEEEEecC----CCCeEECCC-cccCCC------CCH---HHHHHHHHHHHhCCchhhhh-hcc
Q 030711 7 GYRPNVGVCLINSDSQIFVASRLN----VPGAWQMPQ-GGIEDG------EDP---KLAAMRELREETGIVSAEII-AEV 71 (173)
Q Consensus 7 ~~~~~v~~~i~~~~~~vLl~~r~~----~~~~w~lPg-G~ie~g------E~~---~~aa~RE~~EEtGl~~~~~~-~~~ 71 (173)
.+++++++++++.++++||++|.. +||.|.+|+ |++++| |++ .+||+||+.||||+.+..+. ..+
T Consensus 68 ~~h~av~v~v~~~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l 147 (246)
T 2pny_A 68 LLHRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDI 147 (246)
T ss_dssp CCEEEEEEEEECTTCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGS
T ss_pred cEEEEEEEEEEeCCCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCcccc
Confidence 478889999999999999999874 578999995 999999 887 99999999999999853211 001
Q ss_pred CCcccccCCcccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhh------cCc
Q 030711 72 PNWLTYDFPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVD------YKR 145 (173)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~------~~~ 145 (173)
.....+.|..... ..+ ..+...++|.+... ..+. ++++|+.+++|++++++.+++.. ...
T Consensus 148 ~~l~~~~y~~~~~--------~~~-~~~e~~~vf~~~~~-~~~~----~~~~Ev~~~~wv~~eel~~~l~~~~~~~~~ft 213 (246)
T 2pny_A 148 VFMTIYHHKAKSD--------RIW-GEHEICYLLLVRKN-VTLN----PDPSETKSILYLSQEELWELLEREARGEVKVT 213 (246)
T ss_dssp EEEEEEEEEEESS--------SSB-EEEEEEEEEEEECC-CCCC----CCTTTEEEEEEECHHHHHHHHHHHHHTSSCBC
T ss_pred EEEEEEEEEecCC--------Cce-eeeEEEEEEEEEEC-CCCC----CChHHeeEEEEEeHHHHHHHHHhccCCCceEC
Confidence 1111111111000 000 01122333333321 2222 23469999999999999987654 222
Q ss_pred hHHHHHHHHHh
Q 030711 146 PTYEEVMRTFR 156 (173)
Q Consensus 146 ~~~~~~~~~l~ 156 (173)
+.+..+++.+.
T Consensus 214 p~~~~i~~~~l 224 (246)
T 2pny_A 214 PWLRTIAERFL 224 (246)
T ss_dssp HHHHHHHHHTH
T ss_pred HhHHHHHHHHH
Confidence 55555555543
No 68
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.70 E-value=1.1e-16 Score=119.93 Aligned_cols=111 Identities=19% Similarity=0.296 Sum_probs=69.9
Q ss_pred cceeEEEEEe--c---CCcEEEEEecCC--CCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCc
Q 030711 9 RPNVGVCLIN--S---DSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPP 81 (173)
Q Consensus 9 ~~~v~~~i~~--~---~~~vLl~~r~~~--~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 81 (173)
..+|.++|+. . +++|||++|... +|.|.+|||++++||++.+||+||+.||||+...... +.....+..+.
T Consensus 39 ~v~v~~vv~~~~~~~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~--l~~l~~~~~~~ 116 (273)
T 2fml_A 39 SLTVDMVLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQEN--IEQLHSFSRPD 116 (273)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGG--EEEEEEECCTT
T ss_pred ceEEEEEEEEEcCCCCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCc--EEEEEEEcCCC
Confidence 4456666654 2 248999999864 4789999999999999999999999999997632110 11111222222
Q ss_pred ccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHH
Q 030711 82 AVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVE 138 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~ 138 (173)
... ......++|++.+.... . ...+|..++.|++++++.+
T Consensus 117 r~~----------~~~~~~~~y~a~~~~~~----~---~~~~E~~~~~W~~~~e~~~ 156 (273)
T 2fml_A 117 RDP----------RGWVVTVSYLAFIGEEP----L---IAGDDAKEVHWFNLERHGQ 156 (273)
T ss_dssp SST----------TSSEEEEEEEEECCCCC----C---CCCTTEEEEEEEEEEEETT
T ss_pred CCC----------CceEEEEEEEEEeCCCC----C---CCCcceeeEEEEEhhHhhh
Confidence 110 00112456666555322 1 1235888999999997544
No 69
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.65 E-value=9.8e-16 Score=115.66 Aligned_cols=125 Identities=18% Similarity=0.193 Sum_probs=73.8
Q ss_pred cEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCch-----------hhhhhccCC-----ccc-ccCCcccc
Q 030711 22 QIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVS-----------AEIIAEVPN-----WLT-YDFPPAVK 84 (173)
Q Consensus 22 ~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~-----------~~~~~~~~~-----~~~-~~~~~~~~ 84 (173)
++||++|.. .|.|.+|||++++||++.+||+||++||||+.. ..+...+.. +.. ..++....
T Consensus 140 ~vLl~~r~~-~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dpr~~d 218 (292)
T 1q33_A 140 QFVAIKRKD-CGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTD 218 (292)
T ss_dssp EEEEEECTT-TCSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCCTTCCS
T ss_pred EEEEEEecC-CCcEeCCCcccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccCCCCCc
Confidence 589998876 589999999999999999999999999999972 122222110 000 11111100
Q ss_pred cccccccCCccccceEEEEEEEEccCcc--ccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhhhhh
Q 030711 85 TKVNRLWGGEWHGQAQKWFLMKLTNDES--EINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 161 (173)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (173)
+ ......+|.+....... .... .+.+|+.+++|++++++.++...+ ..++..+++.+..+...
T Consensus 219 ---------~-~~~~~~~f~~~~~~g~~~~~~~~---~~~~E~~~~~W~~~del~~L~~~h-~~il~~~~~~~~a~~~~ 283 (292)
T 1q33_A 219 ---------N-AWMETEAVNYHDETGEIMDNLML---EAGDDAGKVKWVDINDKLKLYASH-SQFIKLVAEKRDAHWSE 283 (292)
T ss_dssp ---------S-EEEEEEEEEEEESSSTTTTTCCC---CCCTTCSEEEEEECCTTCCCSTTH-HHHHHHHHHHHTCCCCS
T ss_pred ---------c-cEEEEEEEEEEeCCCcccccccc---CCCCccceEEEEEcccCcccCHhH-HHHHHHHHHHhcCcccC
Confidence 0 01123455555432211 1111 123688999999999998764432 25555555554444333
No 70
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.65 E-value=1.4e-16 Score=115.17 Aligned_cols=105 Identities=15% Similarity=0.189 Sum_probs=66.3
Q ss_pred EecCCcEEEEEecCCCCeEECCCcccCCCC-CHHHHHHHHHHHHhCCchhhhhh----ccCCcccccCCccccccccccc
Q 030711 17 INSDSQIFVASRLNVPGAWQMPQGGIEDGE-DPKLAAMRELREETGIVSAEIIA----EVPNWLTYDFPPAVKTKVNRLW 91 (173)
Q Consensus 17 ~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE-~~~~aa~RE~~EEtGl~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 91 (173)
++.++++||++|. +|.|.||||++++|| |+.+||+||+.||||+.+..... .+. ...+.++ .
T Consensus 52 ~~~~~~vLl~~r~--~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~-~~~~~~~-~--------- 118 (212)
T 1u20_A 52 VPIRRVLLMMMRF--DGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRS-SQVREHP-Q--------- 118 (212)
T ss_dssp EECCEEEEEEEET--TSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEE-EEEECTT-S---------
T ss_pred EecCCEEEEEEeC--CCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEE-eccccCC-C---------
Confidence 3556789998873 689999999999999 99999999999999998543210 111 1112222 0
Q ss_pred CCccccceEEEEEEEEccCcccc----ccCCCCCCcccceeeEeCHHHHHHh
Q 030711 92 GGEWHGQAQKWFLMKLTNDESEI----NLANGEADPEFAEWKWASPEEVVEQ 139 (173)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~E~~~~~W~~~~e~~~~ 139 (173)
....++|.+......... ......++.|+..+.|+|++++.+.
T Consensus 119 -----~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 119 -----KCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp -----CEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred -----cEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 112355655544321111 0000113357888999999999753
No 71
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.64 E-value=1.6e-15 Score=114.25 Aligned_cols=120 Identities=19% Similarity=0.237 Sum_probs=79.5
Q ss_pred ccceeEEEEEecCC---cEEEEEecC----CCCeE-ECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhcc-CCccccc
Q 030711 8 YRPNVGVCLINSDS---QIFVASRLN----VPGAW-QMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEV-PNWLTYD 78 (173)
Q Consensus 8 ~~~~v~~~i~~~~~---~vLl~~r~~----~~~~w-~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~-~~~~~~~ 78 (173)
.+.+|.+.+++.++ ++||.+|+. +||.| ..|+|++++||++.+||+||+.||+|+....+.... ....+|.
T Consensus 117 ~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l~~~g~i~y~ 196 (300)
T 3dup_A 117 RAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQAIPVGAITYC 196 (300)
T ss_dssp CEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTCEEEEEEEEE
T ss_pred EEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhccccceEEEE
Confidence 67788888888876 899999984 78999 588999999999999999999999999853221100 0111222
Q ss_pred CCcccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhh
Q 030711 79 FPPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVD 142 (173)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~ 142 (173)
+... ..+. ....|++...... +..+ .++++|+.+++|++++++.+++..
T Consensus 197 ~~~~----------~G~~--~E~~~vy~~~l~~-~~~p--~~~~~EV~~~~~v~~~El~~~l~~ 245 (300)
T 3dup_A 197 MESP----------AGIK--PDTLFLYDLALPE-DFRP--HNTDGEMADFMLWPAAKVVEAVRT 245 (300)
T ss_dssp EEET----------TEEE--EEEEEEEEEECCT-TCCC--CCTTSSEEEEEEEEHHHHHHHHHH
T ss_pred EecC----------CCeE--EEEEEEEEEEecC-CCcC--CCCchHhheEEEECHHHHHHHHhc
Confidence 1110 0111 1233444333211 1111 134579999999999999998765
No 72
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.63 E-value=6.5e-16 Score=120.22 Aligned_cols=122 Identities=16% Similarity=0.250 Sum_probs=82.3
Q ss_pred cceeEEEEEecCCcEEEEEecC---CCCeEECCCcccCCCCCHHHHHHHHHHHHhCCchhhhhhccCCcccccCCccccc
Q 030711 9 RPNVGVCLINSDSQIFVASRLN---VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 85 (173)
Q Consensus 9 ~~~v~~~i~~~~~~vLl~~r~~---~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (173)
+..++++|++.+++|||++|.. ++|.|+||||.+++| ++.+|+.||+.||||+.+.... .+. ...+.|++..
T Consensus 240 ~~~~~~vi~~~~g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~-~l~-~~~h~~~h~~-- 314 (369)
T 3fsp_A 240 VPLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTE-PIV-SFEHAFSHLV-- 314 (369)
T ss_dssp EEEEEEEEECSSSEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECC-CCC-EEEEECSSEE--
T ss_pred EEEEEEEEEeCCCEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeec-ccc-cEEEEcceEE--
Confidence 3345556677889999999985 458999999999999 9999999999999999853221 111 1223333211
Q ss_pred ccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHhhhhhh
Q 030711 86 KVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFRPYLNE 161 (173)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (173)
...++|.+..... ..|..++.|++++++.++..+ .....+++.+.+.+..
T Consensus 315 ------------~~~~~~~~~~~~~-----------~~e~~~~~Wv~~~el~~~~l~---~~~~~il~~l~~~~~~ 364 (369)
T 3fsp_A 315 ------------WQLTVFPGRLVHG-----------GPVEEPYRLAPEDELKAYAFP---VSHQRVWREYKEWASG 364 (369)
T ss_dssp ------------EEEEEEEEEECCS-----------SCCCTTEEEEEGGGGGGSCCC---HHHHHHHHHHHHHTC-
T ss_pred ------------EEEEEEEEEEcCC-----------CCCccccEEeeHHHhhhCCCC---HHHHHHHHHHHHHhcC
Confidence 0123444443321 146788999999999987553 6777777777665543
No 73
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.58 E-value=7.3e-15 Score=107.16 Aligned_cols=60 Identities=23% Similarity=0.428 Sum_probs=49.6
Q ss_pred CCCccceeEEEEEecC--C--cEEEEEecC----CCCeEECCCcccCCCCC--------------------HHHHHHHHH
Q 030711 5 PSGYRPNVGVCLINSD--S--QIFVASRLN----VPGAWQMPQGGIEDGED--------------------PKLAAMREL 56 (173)
Q Consensus 5 ~~~~~~~v~~~i~~~~--~--~vLl~~r~~----~~~~w~lPgG~ie~gE~--------------------~~~aa~RE~ 56 (173)
....|.+++++++++. + +|||++|.. .+|.|.||||+++++|+ +..||+||+
T Consensus 4 ~~~~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~ 83 (232)
T 3qsj_A 4 MTDIRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRET 83 (232)
T ss_dssp CCCEEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHH
T ss_pred CCCCcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHH
Confidence 3457888888777553 3 899999986 36899999999999886 589999999
Q ss_pred HHHhCCch
Q 030711 57 REETGIVS 64 (173)
Q Consensus 57 ~EEtGl~~ 64 (173)
+||||+..
T Consensus 84 ~EE~Gl~l 91 (232)
T 3qsj_A 84 AEEIGWLL 91 (232)
T ss_dssp HHHHSCCC
T ss_pred HHHhCcee
Confidence 99999974
No 74
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.46 E-value=3.2e-14 Score=103.01 Aligned_cols=42 Identities=31% Similarity=0.446 Sum_probs=37.0
Q ss_pred cEEEEEecCCCCeEECCCcccCCCC-CHHHHHHHHHHHHhCCchh
Q 030711 22 QIFVASRLNVPGAWQMPQGGIEDGE-DPKLAAMRELREETGIVSA 65 (173)
Q Consensus 22 ~vLl~~r~~~~~~w~lPgG~ie~gE-~~~~aa~RE~~EEtGl~~~ 65 (173)
++||+.|. ++.|.+|||++++|| ++.+||+||++||||+.+.
T Consensus 66 ~~ll~~r~--~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~ 108 (217)
T 2xsq_A 66 AILMQMRF--DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAA 108 (217)
T ss_dssp EEEEEEET--TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGG
T ss_pred cEEEEEcc--CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCc
Confidence 56666665 589999999999999 9999999999999999854
No 75
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.28 E-value=1.6e-11 Score=93.59 Aligned_cols=103 Identities=12% Similarity=0.212 Sum_probs=64.5
Q ss_pred EEEecCCcEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHh-CCchhhhhhccCCcccccCCcccccccccccCC
Q 030711 15 CLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREET-GIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWGG 93 (173)
Q Consensus 15 ~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEt-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (173)
+|+..+++|||+ . ..| |.||||.++ ++..++|+||++||| |+.+. +...+. .++.+..
T Consensus 188 aii~~~g~vLL~--~-~~G-W~LPG~~~~--~~~~~~a~RE~~EEttGl~v~-~~~L~~---v~~~~~~----------- 246 (321)
T 3rh7_A 188 AVLEQQGAVFLA--G-NET-LSLPNCTVE--GGDPARTLAAYLEQLTGLNVT-IGFLYS---VYEDKSD----------- 246 (321)
T ss_dssp EEEESSSCEEEB--C-SSE-EBCCEEEES--SSCHHHHHHHHHHHHHSSCEE-EEEEEE---EEECTTT-----------
T ss_pred EEEEECCEEEEe--e-CCC-ccCCcccCC--CChhHHHHHHHHHHhcCCEEe-eceEEE---EEEcCCC-----------
Confidence 555667999999 2 247 999987554 444569999999997 99953 222221 1221110
Q ss_pred ccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHhhhhcCchHHHHHHHHHh
Q 030711 94 EWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQAVDYKRPTYEEVMRTFR 156 (173)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~~~~~~~~~~l~ 156 (173)
.+...+|.+...... ..+++||++++++.+... .+.++.+++++.
T Consensus 247 ---~~~~i~f~~~~~~g~-------------~~e~~~f~~~elp~~~~~--~~~~~~~L~~y~ 291 (321)
T 3rh7_A 247 ---GRQNIVYHALASDGA-------------PRQGRFLRPAELAAAKFS--SSATADIINRFV 291 (321)
T ss_dssp ---CCEEEEEEEEECSSC-------------CSSSEEECHHHHTTCEES--SHHHHHHHHHHH
T ss_pred ---ceEEEEEEEEeCCCC-------------eeeeEEECHHHCCCcccC--CHHHHHHHHHHH
Confidence 112456666665321 257899999999986432 366666665543
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.22 E-value=6e-11 Score=83.67 Aligned_cols=121 Identities=20% Similarity=0.240 Sum_probs=74.0
Q ss_pred ccceeEEEEE-ecCC--cEEEEEecCCCCeEECCCcccCCCCCHHHHHHHHHHHHhCCch-----hhhhhccCCcccccC
Q 030711 8 YRPNVGVCLI-NSDS--QIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVS-----AEIIAEVPNWLTYDF 79 (173)
Q Consensus 8 ~~~~v~~~i~-~~~~--~vLl~~r~~~~~~w~lPgG~ie~gE~~~~aa~RE~~EEtGl~~-----~~~~~~~~~~~~~~~ 79 (173)
.|++|.++++ ++++ +|||+++. .+.|.||||.+++||+..+|+.||+.||+|+.. ..+-..++.+.+..+
T Consensus 57 ~R~sV~avil~~~~~~phVLLlq~~--~~~f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~lg~wwRp~f 134 (208)
T 3bho_A 57 MRRTVEGVLIVHEHRLPHVLLLQLG--TTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNF 134 (208)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEE--TTEEECSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEEEEEEEECSS
T ss_pred CceEEEEEEEEcCCCCcEEEEEEcC--CCcEECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhheEEEEecCCC
Confidence 6777777665 3444 69999875 469999999999999999999999999999531 122233344444444
Q ss_pred CcccccccccccCCccccceEEEEEEEEccCccccccCCCCCCcccceeeEeCHHHHHHh
Q 030711 80 PPAVKTKVNRLWGGEWHGQAQKWFLMKLTNDESEINLANGEADPEFAEWKWASPEEVVEQ 139 (173)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~e~~~~ 139 (173)
......++.-+..+.. ....+|+..++.. ..+.. +......-+|+-|+-+.
T Consensus 135 et~~YPYlP~Hit~pK--E~~kly~V~Lp~~-~~f~v------Pkn~kL~AvPLfely~N 185 (208)
T 3bho_A 135 EPPQYPYIPAHITKPK--EHKKLFLVQLQEK-ALFAV------PKNYKLVAAPLFELYDN 185 (208)
T ss_dssp SSCCBSSCCTTCCSCS--EEEEEEEEECCSS-EEEEE------ETTCEEEEEEHHHHTTC
T ss_pred CCcCCCCCCcccCchh--hheeeeeEecCcc-ceEec------CCCCeEEeecHHhhhcc
Confidence 4333333332222221 1234555555542 23333 13356777888887654
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.01 E-value=8.6e-11 Score=82.04 Aligned_cols=55 Identities=16% Similarity=0.240 Sum_probs=43.3
Q ss_pred CCccceeEEEEEecC-----C------cEEEEEecCCCCeEECCCcccCCCC-CHHHHHHHHHHHHhCC
Q 030711 6 SGYRPNVGVCLINSD-----S------QIFVASRLNVPGAWQMPQGGIEDGE-DPKLAAMRELREETGI 62 (173)
Q Consensus 6 ~~~~~~v~~~i~~~~-----~------~vLl~~r~~~~~~w~lPgG~ie~gE-~~~~aa~RE~~EEtGl 62 (173)
+++++++.+.+.-++ + .+||+.|. +|.|+||||++|+|| |+++|+.||+.||+|+
T Consensus 18 ~~~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R~--~G~weFPGGkVe~gE~t~e~aL~REl~EElg~ 84 (214)
T 3kvh_A 18 PGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMRF--DGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGC 84 (214)
T ss_dssp TTCEEEEEEEEEEEEEEEETTTEEEEEEEEEEEET--TSCEECSEEEECTTTCCHHHHHHHSCCSCC--
T ss_pred cCccEeeEEEEEcCCccccccccchhheEEEeeee--CCEEeCCCccCCCCCCCHHHHHHHHHHHhhCC
Confidence 458889988776444 2 24555555 589999999999999 9999999999999996
No 78
>1kvd_B SMK toxin; halotolerant yeast; 1.80A {Pichia farinosa} SCOP: d.70.1.2 PDB: 1kve_B
Probab=42.16 E-value=42 Score=18.33 Aligned_cols=32 Identities=9% Similarity=0.395 Sum_probs=20.4
Q ss_pred cceeEEE-EEecCCcEEEEEecCCCCeEECCCcccCCCCC
Q 030711 9 RPNVGVC-LINSDSQIFVASRLNVPGAWQMPQGGIEDGED 47 (173)
Q Consensus 9 ~~~v~~~-i~~~~~~vLl~~r~~~~~~w~lPgG~ie~gE~ 47 (173)
|..|++- +-+.+..+++++ +++-||.-+||-+
T Consensus 40 hqgvacstvkdgnkdvymik-------fslaggsndpggs 72 (77)
T 1kvd_B 40 HQGVACSTVKDGNKDVYMIK-------FSLAGGSNDPGGS 72 (77)
T ss_dssp SCEEEEEEEEETTEEEEEEE-------EEECSCCSCCCSC
T ss_pred ccceeeeeeecCCccEEEEE-------EEeccCCCCCCCC
Confidence 4556663 445667788886 5666676666544
No 79
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=29.43 E-value=93 Score=19.94 Aligned_cols=30 Identities=13% Similarity=0.044 Sum_probs=22.8
Q ss_pred eEECCCcccC---CCCCHHHHHHHHHHHHhCCc
Q 030711 34 AWQMPQGGIE---DGEDPKLAAMRELREETGIV 63 (173)
Q Consensus 34 ~w~lPgG~ie---~gE~~~~aa~RE~~EEtGl~ 63 (173)
.+.+-+|.+- .|+++.+...+|+.+-+|.+
T Consensus 84 hfd~~~~~Wi~~rdg~~L~~~L~~el~~~~g~~ 116 (129)
T 3t3l_A 84 RYDWTGKNWVYSHDGVSLHELLAAELTKALKTK 116 (129)
T ss_dssp EEEECSSSEEETTTCCBHHHHHHHHHHHHHTSC
T ss_pred eeEecCCEEEECCCCchHHHHHHHHHHHHhCCc
Confidence 4555544332 48899999999999999976
No 80
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=22.87 E-value=1.2e+02 Score=24.17 Aligned_cols=56 Identities=16% Similarity=0.214 Sum_probs=35.5
Q ss_pred eeEEEEEecCCcEEEEEecCCCCeEECCCcccCCC-CCH---HHHHHHHHHHHhCCchhhh
Q 030711 11 NVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDG-EDP---KLAAMRELREETGIVSAEI 67 (173)
Q Consensus 11 ~v~~~i~~~~~~vLl~~r~~~~~~w~lPgG~ie~g-E~~---~~aa~RE~~EEtGl~~~~~ 67 (173)
++.++++|.+++++-..+..++- +....|.+|.+ +.+ ...++|++.++.|+....+
T Consensus 15 s~Ka~l~d~~G~~va~~~~~~~~-~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~~~I 74 (526)
T 3ezw_A 15 SSRAVVMDHDANIISVSQREFEQ-IYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQI 74 (526)
T ss_dssp EEEEEEECTTCCEEEEEEEECCC-BCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred ceeeeEEcCCCCEEEEEEEecCc-ccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhhE
Confidence 45568899999988765554332 33335777653 222 3357889999999875444
No 81
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=21.64 E-value=52 Score=17.40 Aligned_cols=12 Identities=33% Similarity=0.404 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHH
Q 030711 48 PKLAAMRELREE 59 (173)
Q Consensus 48 ~~~aa~RE~~EE 59 (173)
-.=.|+||++|-
T Consensus 40 dF~~aVREVYEh 51 (53)
T 1zl8_A 40 EFFGAVREVYET 51 (53)
T ss_dssp SHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344789999884
Done!