BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030712
(173 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 74/125 (59%)
Query: 34 IEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPNDFVYKVIGVADKEDTNLSQY 93
I+ L LGS AA + D LK +THIL VA + A +DF YK I + D +TN+ Y
Sbjct: 7 IKPWLLLGSQDAAHDLDTLKKNKVTHILNVAYGVENAFLSDFTYKSISILDLPETNILSY 66
Query: 94 FDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRPQAA 153
F EC FI+EAKR+ G VLVH AG SR+ IV+ +LM S + A VK+ RP
Sbjct: 67 FPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSIC 126
Query: 154 PNSGF 158
PNSGF
Sbjct: 127 PNSGF 131
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 31 PFEIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPN------DFVYKVIGVAD 84
P +I L+LGS ++N ++L I +IL V P PN DF YK I ++D
Sbjct: 3 PVQILPNLYLGSARDSANLESLAKLGIRYILNVT----PNLPNFFEKNGDFHYKQIPISD 58
Query: 85 KEDTNLSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGH 144
NLS++F E I FIDEA Q GVLVHC AG SRSVT+ VAYLM+K +SL+ A
Sbjct: 59 HWSQNLSRFFPEAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLNDAYDL 118
Query: 145 VKSRRPQAAPNSGFXXXXXXXXKSLQ 170
VK ++ +PN F +SL+
Sbjct: 119 VKRKKSNISPNFNFMGQLLDFERSLR 144
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Query: 31 PFEIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPN--DFVYKVIGVADKEDT 88
P EI L+LG ++N D L+ I +IL V L N +F YK I ++D
Sbjct: 4 PVEILPFLYLGCAKDSTNLDVLEEFGIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQ 63
Query: 89 NLSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSR 148
NLSQ+F E ISFIDEA+ + GVLVH AG SRSVT+ VAYLM+K +S++ A VK +
Sbjct: 64 NLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMK 123
Query: 149 RPQAAPNSGF 158
+ +PN F
Sbjct: 124 KSNISPNFNF 133
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 81/146 (55%), Gaps = 10/146 (6%)
Query: 31 PFEIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPN------DFVYKVIGVAD 84
P +I L+LGS ++N ++L I +IL V P PN DF YK I ++D
Sbjct: 6 PVQILPNLYLGSARDSANLESLAKLGIRYILNVT----PNLPNFFEKNGDFHYKQIPISD 61
Query: 85 KEDTNLSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGH 144
NLS++F E I FIDEA Q GVLVH AG SRSVT+ VAYLM+K +SL+ A
Sbjct: 62 HWSQNLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDL 121
Query: 145 VKSRRPQAAPNSGFXXXXXXXXKSLQ 170
VK ++ +PN F +SL+
Sbjct: 122 VKRKKSNISPNFNFMGQLLDFERSLR 147
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 73/128 (57%)
Query: 31 PFEIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPNDFVYKVIGVADKEDTNL 90
P +I + +FLGS ASN + L++R + +IL V + P F Y I V D+E T+L
Sbjct: 4 PTQIFEHVFLGSEWNASNLEDLQNRGVRYILNVTREIDNFFPGVFEYHNIRVYDEEATDL 63
Query: 91 SQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRP 150
Y+++ FI +AK+ LVH G SRS + V+AY MK++G +L +A +VK RR
Sbjct: 64 LAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRT 123
Query: 151 QAAPNSGF 158
PN F
Sbjct: 124 VTKPNPSF 131
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 71/141 (50%)
Query: 33 EIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPNDFVYKVIGVADKEDTNLSQ 92
+I LFLG ASN+ L++R IT I+ + + F Y + +AD +
Sbjct: 28 QITSSLFLGRGSVASNRHLLQARGITCIVNATIEIPNFNWPQFEYVKVPLADMPHAPIGL 87
Query: 93 YFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRPQA 152
YFD I R+ G LVHC AG SRS T+ +AYLMK H + L +A VK+RRP
Sbjct: 88 YFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRPVI 147
Query: 153 APNSGFXXXXXXXXKSLQGRT 173
PN GF + L G++
Sbjct: 148 RPNVGFWRQLIDYERQLFGKS 168
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Query: 37 GLFLGSIGAASNKDALKSRNITHILTVANALAPAHPNDFVYKVIGVADKEDTNLSQYFDE 96
GL+LG+ A + D L ITHI+++ + P D Y I VAD + + ++F E
Sbjct: 14 GLYLGNFIDAKDLDQLGRNKITHIISIHESPQPLL-QDITYLRIPVADTPEVPIKKHFKE 72
Query: 97 CISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRPQAAPNS 156
CI+FI + G LVH FAG SRS TIV AY+M G+ + +K+ RP A PN
Sbjct: 73 CINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRPIANPNP 132
Query: 157 GF 158
GF
Sbjct: 133 GF 134
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 69/128 (53%)
Query: 31 PFEIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPNDFVYKVIGVADKEDTNL 90
P EI L+LGS A+ +D L + IT +L V++ + YK I V D ++
Sbjct: 4 PVEILPFLYLGSAYHAARRDMLDALGITALLNVSSDCPNHFEGHYQYKCIPVEDNHKADI 63
Query: 91 SQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRP 150
S +F E I +ID K RG VLVH AG SRS TI +AYLM K + L +A VK RR
Sbjct: 64 SSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRS 123
Query: 151 QAAPNSGF 158
+PN F
Sbjct: 124 IISPNFSF 131
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 70/128 (54%)
Query: 31 PFEIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPNDFVYKVIGVADKEDTNL 90
P EI L+LGS AS + L + +IT +L V+ + A YK I V D ++
Sbjct: 6 PVEILPFLYLGSAYHASKCEFLANLHITALLNVSRRTSEACMTHLHYKWIPVEDSHTADI 65
Query: 91 SQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRP 150
S +F E I FID + + G VLVH AG SRS TI +AYLMK L +A ++K RR
Sbjct: 66 SSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRS 125
Query: 151 QAAPNSGF 158
+PN GF
Sbjct: 126 MVSPNFGF 133
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 68/128 (53%)
Query: 31 PFEIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPNDFVYKVIGVADKEDTNL 90
P EI LFLGS +S+ L++ IT +L V+ + F YK I V D + +
Sbjct: 4 PVEILPYLFLGSCSHSSDLQGLQACGITAVLNVSASCPNHFEGLFRYKSIPVEDNQMVEI 63
Query: 91 SQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRP 150
S +F E I FID K G VLVH AG SRS TI +AYLM+ + L +A VK RR
Sbjct: 64 SAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRG 123
Query: 151 QAAPNSGF 158
+PN F
Sbjct: 124 VISPNFSF 131
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 68/126 (53%)
Query: 33 EIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPNDFVYKVIGVADKEDTNLSQ 92
+I + L++ + AA+NK L S IT ++ V+ + D Y + VAD ++ L
Sbjct: 22 QITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVNTLYEDIQYMQVPVADSPNSRLCD 81
Query: 93 YFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRPQA 152
+FD I + ++G L+HC AG SRS + +AYLMK H MSL A KS RP
Sbjct: 82 FFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRPII 141
Query: 153 APNSGF 158
PNSGF
Sbjct: 142 RPNSGF 147
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Query: 33 EIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPNDFVYKVIGVADKEDTNLSQ 92
+I GL++G+ A + + L +THIL+V ++ P Y I AD NL++
Sbjct: 9 KILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARPM-LEGVKYLCIPAADSPSQNLTR 67
Query: 93 YFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRPQA 152
+F E I FI E + + LVHC AG SRSVT+V+AY+M A+ V++ R A
Sbjct: 68 HFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCA 127
Query: 153 APNSGF 158
PN GF
Sbjct: 128 NPNVGF 133
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 33 EIEQGLFLGSIGAA--SNKDALKSRNITHILTV-----ANALAPAHPNDFVYKVIGVADK 85
EI GLFLG +A S L+ ITHI+ + AN + P F Y V+ +AD
Sbjct: 8 EILPGLFLGPYSSAMKSKLPVLQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDIADN 67
Query: 86 EDTNLSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHV 145
N+ ++F FID + + G VLVH AG SRS V+AY+M+ GM A +V
Sbjct: 68 PVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAYV 127
Query: 146 KSRRPQAAPNSGF 158
+ RR PN+GF
Sbjct: 128 QERRFCINPNAGF 140
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 11/136 (8%)
Query: 33 EIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPND---------FVYKVIGVA 83
E+ +++G+ A + L+ ITH+L A + H N Y I
Sbjct: 30 EVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKAN 89
Query: 84 DKEDTNLSQYFDECISFIDEAKRQRGG-VLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAM 142
D ++ NLS YF+ FID+A Q+ G VLVHC G SRS T+V+AYLM + M + A+
Sbjct: 90 DTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSAL 149
Query: 143 GHVKSRRPQAAPNSGF 158
V+ R + PN GF
Sbjct: 150 SIVRQNR-EIGPNDGF 164
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 11/136 (8%)
Query: 33 EIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPND---------FVYKVIGVA 83
E+ +++G+ A + L+ ITH+L A + H N Y I
Sbjct: 31 EVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKAN 90
Query: 84 DKEDTNLSQYFDECISFIDEAKRQRGG-VLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAM 142
D ++ NLS YF+ FID+A Q+ G VLVHC G SRS T+V+AYLM + M + A+
Sbjct: 91 DTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSAL 150
Query: 143 GHVKSRRPQAAPNSGF 158
V+ R + PN GF
Sbjct: 151 SIVRQNR-EIGPNDGF 165
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 73/131 (55%), Gaps = 7/131 (5%)
Query: 30 VPFEIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPND--FVYKVIGVADKED 87
+PF LFLG+ A + D ++ NI +++ V L H F YK + D
Sbjct: 8 LPF-----LFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNK 62
Query: 88 TNLSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKS 147
NL QYF+E FI+EA + G+L+HC AG SRS TIV+AYLMK M+++ A VK
Sbjct: 63 QNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKG 122
Query: 148 RRPQAAPNSGF 158
+RP +PN F
Sbjct: 123 KRPIISPNLNF 133
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Query: 38 LFLGSIGAASNKDALKSRNITHILTVANALAPAHPND--FVYKVIGVADKEDTNLSQYFD 95
LFLG+ A + D ++ NI +++ V L H F YK + D NL QYF+
Sbjct: 15 LFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFE 74
Query: 96 ECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRPQAAPN 155
E FI+EA + G+L+HC AG SRS TIV+AYLMK M+++ A VK +RP +PN
Sbjct: 75 EAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPN 134
Query: 156 SGF 158
F
Sbjct: 135 LNF 137
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 33 EIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPND---------FVYKVIGVA 83
E+ +++G+ A + L+ ITH+L A + H N Y I
Sbjct: 31 EVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKAN 90
Query: 84 DKEDTNLSQYFDECISFIDEAKRQRGG-VLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAM 142
D ++ NLS YF+ FID+A Q+ G VLVH G SRS T+V+AYLM + M + A+
Sbjct: 91 DTQEFNLSAYFERAADFIDQALAQKNGRVLVHSREGYSRSPTLVIAYLMMRQKMDVKSAL 150
Query: 143 GHVKSRRPQAAPNSGF 158
V+ R + PN GF
Sbjct: 151 SIVRQNR-EIGPNDGF 165
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 33 EIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPNDFV-----YKVIGVADKED 87
E+ GL+LG A+N+ L+ ITH+L +++ P + Y + D
Sbjct: 4 EVWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPA 63
Query: 88 TNLSQYFDECISFIDEAKRQRGG-VLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVK 146
++S +F FI A Q GG +LVHC G SRS T+V+AYLM H ++L +A+ VK
Sbjct: 64 FDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVK 123
Query: 147 SRRPQAAPNSGF 158
R PN GF
Sbjct: 124 DHR-GIIPNRGF 134
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 33 EIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPNDFV-----YKVIGVADKED 87
E+ GL+LG A+N+ L+ ITH+L +++ P + Y + D
Sbjct: 5 EVWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPA 64
Query: 88 TNLSQYFDECISFIDEAKRQRGG-VLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVK 146
++S +F FI A Q GG +LVH G SRS T+V+AYLM H ++L +A+ VK
Sbjct: 65 FDMSIHFQTAADFIHRALSQPGGKILVHSAVGVSRSATLVLAYLMLYHHLTLVEAIKKVK 124
Query: 147 SRRPQAAPNSGF 158
R PN GF
Sbjct: 125 DHR-GIIPNRGF 135
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Query: 31 PF-EIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPNDFVYKVIGVADKEDTN 89
PF + LF+G+ AA + L IT + V+ + V D +
Sbjct: 11 PFARVAPALFIGNARAAGATELLVRAGITLCVNVSRQQPGPRAPGVAELRVPVFDDPAED 70
Query: 90 LSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRR 149
L + + + ++ A R G LV+C GRSRS + AYLM+ G SL +A VKS R
Sbjct: 71 LLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSAR 130
Query: 150 PQAAPNSGFXXXXXXXXKSLQGR 172
P A PN GF ++LQ +
Sbjct: 131 PVAEPNLGFWAQLQKYEQTLQAQ 153
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 33 EIEQGLFLGSIGAASNKDALKSRNITHILTVANA-----LAPAHPNDFVYKVIGV-ADKE 86
E+ L++G A ++ L+ TH+L A+ P + D + GV AD
Sbjct: 56 EVWPKLYIGDEATALDRYRLQKAGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADDL 115
Query: 87 DT-NLSQYFDECISFIDEA-KRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGH 144
T +LS +F +FID A +LVHC GRSRS T+V+AYLM M+L A+
Sbjct: 116 PTFDLSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQ 175
Query: 145 VKSRRPQAAPNSGFXXXXXXXXKSL 169
V R PN GF K L
Sbjct: 176 VAKNR-CVLPNRGFLKQLRELDKQL 199
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 33 EIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPND----------FVYKVIGV 82
E+ LFLG AA +K L ITH V NA A D Y I
Sbjct: 48 EVWPSLFLGDAYAARDKSKLIQLGITH---VVNAAAGKFQVDTGAKFYRGMSLEYYGIEA 104
Query: 83 ADKEDTNLSQYFDECISFIDEA-KRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQA 141
D +LS YF +I A +G VLVHC G SRS T+V+A+LM M+L +A
Sbjct: 105 DDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEA 164
Query: 142 MGHVKSRRPQAAPNSGF 158
+ V++ R PNSGF
Sbjct: 165 IQTVQAHR-NICPNSGF 180
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 33 EIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPND----------FVYKVIGV 82
E+ LFLG AA +K L ITH V NA A D Y I
Sbjct: 48 EVWPSLFLGDAYAARDKSKLIQLGITH---VVNAAAGKFQVDTGAKFYRGMSLEYYGIEA 104
Query: 83 ADKEDTNLSQYFDECISFIDEA-KRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQA 141
D +LS YF +I A +G VLVHC G SRS T+V+A+LM M+L +A
Sbjct: 105 DDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMICENMTLVEA 164
Query: 142 MGHVKSRRPQAAPNSGF 158
+ V++ R PNSGF
Sbjct: 165 IQTVQAHR-NICPNSGF 180
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 85 KEDTNLSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGH 144
+ D+ ++ S I A +R +L+HC G SRS T+++AY+MK H +SL +
Sbjct: 94 EHDSQIALDLPSLTSIIHAATTKREKILIHCQCGLSRSATLIIAYIMKYHNLSLRHSYDL 153
Query: 145 VKSRRPQAAPNSGFXXXXXXXXKSLQGRT 173
+KSR + P+ G +L +T
Sbjct: 154 LKSRADKINPSIGLIFQLMEWEVALNAKT 182
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%)
Query: 85 KEDTNLSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGH 144
+ D+ ++ S I A +R +L+H G SRS T+++AY+MK H +SL +
Sbjct: 94 EHDSQIALDLPSLTSIIHAATTKREKILIHSQCGLSRSATLIIAYIMKYHNLSLRHSYDL 153
Query: 145 VKSRRPQAAPNSGFXXXXXXXXKSLQGRT 173
+KSR + P+ G +L +T
Sbjct: 154 LKSRADKINPSIGLIFQLMEWEVALNAKT 182
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%)
Query: 85 KEDTNLSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGH 144
+ D+ ++ S I A +R +L+H G SRS T+++AY+MK H +SL +
Sbjct: 94 EHDSQIALDLPSLTSIIHAATTKREKILIHXQCGLSRSATLIIAYIMKYHNLSLRHSYDL 153
Query: 145 VKSRRPQAAPNSGFXXXXXXXXKSLQGRT 173
+KSR + P+ G +L +T
Sbjct: 154 LKSRADKINPSIGLIFQLMEWEVALNAKT 182
>pdb|3EMU|A Chain A, Crystal Structure Of A Leucine Rich Repeat And Phosphatase
Domain Containing Protein From Entamoeba Histolytica
Length = 161
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%)
Query: 31 PFEIEQGLFLGSIGAASNKDALKSRNITHILTVANALAPAHPNDFVYKVIGVADKEDTNL 90
P +I Q + LGS A N D + + NI+ IL V + + + + +E L
Sbjct: 10 PTQIIQYIHLGSFLNAHNVDYIHNNNISSILLVGIEVPSLFKDQCDILRLDIVSEEGHQL 69
Query: 91 SQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRP 150
I FI + +++ GVL+ G +++ IV+A+LM +S A V+ P
Sbjct: 70 YDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNKVQGLYP 129
Query: 151 QAAPNSGFXXXXXXXXKSLQ 170
SGF K L+
Sbjct: 130 LIDIESGFILQLKLFEKKLE 149
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 80 IGVADKEDTNLSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSL 138
I + D T++S+YFD+ +F+ + ++ VLVH AG +RS +++AYLM K+ SL
Sbjct: 80 IPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESL 138
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 80 IGVADKEDTNLSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSL 138
I + D T++S+YFD+ +F+ + ++ VLVHC AG +RS ++AYL K+ SL
Sbjct: 97 IPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAXILAYLXSKNKESL 155
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 80 IGVADKEDTNLSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMS 137
I + D T++S+YFD+ +F+ + ++ VLVHC AG +RS ++AYL K+ S
Sbjct: 76 IPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCVAGVNRSGAXILAYLXSKNKES 133
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 99 SFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRP 150
F+D + G + VHC AG R+ T++ Y+MK + M+ ++ + V+ RP
Sbjct: 260 EFLDICENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRP 311
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 95 DECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRP 150
D + +DEA + V VHC G R+ T++ YL+K+ G++ A+ ++ RP
Sbjct: 75 DRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRRLRP 130
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 111 VLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAM 142
V VHC AGRSRS T+V AYL++ H S +A+
Sbjct: 92 VYVHCKAGRSRSATMVAAYLIQVHNWSPEEAI 123
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 95 DECISFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRP 150
D + +DEA + V VHC G R+ T + YL+K+ G++ A+ ++ RP
Sbjct: 76 DRFVQIVDEANARGEAVGVHCALGFGRTGTXLACYLVKERGLAAGDAIAEIRRLRP 131
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 65 NALAPAHPNDFVYKVIGVADKEDTNLSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVT 124
N L P H I + D + SQ+ + E + G LVHC G R+ T
Sbjct: 58 NGLQPLH--------IPIPDGGVPSDSQFLTIMKWLLSEKE----GNLVHCVGGIGRTGT 105
Query: 125 IVVAYLMKKHGMSLSQAMGHVKSRRPQAA 153
I+ +YL+ G+ + A+ V+ RP A
Sbjct: 106 ILASYLILTEGLEVESAIDEVRLVRPGAV 134
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 99 SFIDEAKRQRGGVLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRP 150
F+D + G + VH AG R+ T++ Y+MK + M+ ++ + V+ RP
Sbjct: 260 EFLDICENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRP 311
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 111 VLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAM 142
V VH AGRSRS T+V AYL++ H S +A+
Sbjct: 93 VYVHSKAGRSRSATMVAAYLIQVHNWSPEEAI 124
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 65 NALAPAHPNDFVYKVIGVADKEDTNLSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVT 124
N L P H I + D + SQ+ + E + G LVH G R+ T
Sbjct: 58 NGLQPLH--------IPIPDGGVPSDSQFLTIMKWLLSEKE----GNLVHSVGGIGRTGT 105
Query: 125 IVVAYLMKKHGMSLSQAMGHVKSRRPQAA 153
I+ +YL+ G+ + A+ V+ RP A
Sbjct: 106 ILASYLILTEGLEVESAIDEVRLVRPGAV 134
>pdb|3AWG|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
Length = 334
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 31 PFEIEQGLFLGSIGAASNKDALKSRNITHILTVAN--ALAPAHPNDFVYKVIGVADKEDT 88
P Q LF IG S K + I + + ++ VY+V+ +D
Sbjct: 35 PSSGRQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVM----IDDH 90
Query: 89 NLSQYFDECISFIDEAKRQRGG-----VLVHCFAGRSRSVTIVVAYLMKKHGMSLS-QAM 142
N+ D + FID+AK + +HC AG+ R+ T+V ++L++ + +A+
Sbjct: 91 NVPTLVD-LLKFIDDAKVWMTSDPDHVIAIHCKAGKGRTGTLVSSWLLEDGKFDTAKEAL 149
Query: 143 GHVKSRR 149
+ SRR
Sbjct: 150 EYFGSRR 156
>pdb|3AWE|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
Length = 334
Score = 30.4 bits (67), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 31 PFEIEQGLFLGSIGAASNKDALKSRNITHILTVAN--ALAPAHPNDFVYKVIGVADKEDT 88
P Q LF IG S K + I + + ++ VY+V+ +D
Sbjct: 35 PSSGRQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVM----IDDH 90
Query: 89 NLSQYFDECISFIDEAKRQRGG-----VLVHCFAGRSRSVTIVVAYLMKKHGMSLS-QAM 142
N+ D + FID+AK + +HC G+ R+ T+V ++L++ + +A+
Sbjct: 91 NVPTLVD-LLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDGKFDTAKEAL 149
Query: 143 GHVKSRR 149
+ SRR
Sbjct: 150 EYFGSRR 156
>pdb|3AWF|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
Length = 346
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 31 PFEIEQGLFLGSIGAASNKDALKSRNITHILTVAN--ALAPAHPNDFVYKVIGVADKEDT 88
P Q LF IG S K + I + + ++ VY+V+ +D
Sbjct: 47 PSSGRQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVM----IDDH 102
Query: 89 NLSQYFDECISFIDEAKRQRGG-----VLVHCFAGRSRSVTIVVAYLMKKHGMSLS-QAM 142
N+ D + FID+AK + +HC G+ R+ T+V ++L++ + +A+
Sbjct: 103 NVPTLVD-LLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDGKFDTAKEAL 161
Query: 143 GHVKSRR 149
+ SRR
Sbjct: 162 EYFGSRR 168
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 69 PAHPNDFVYKV--IGVADKEDTNLSQYFDECISFIDEAKRQRGGVLVHCFAGRSRSVTIV 126
P P V +V +G D + FDE +S I +LVHC AG R+ T++
Sbjct: 182 PGKPMHRVLQVQYVGWPDHGVPESAASFDELLSVIKNCVTT-SPILVHCSAGIGRTGTLI 240
Query: 127 VAY 129
AY
Sbjct: 241 GAY 243
>pdb|1X24|A Chain A, Prl-1 (Ptp4a)
pdb|1X24|B Chain B, Prl-1 (Ptp4a)
Length = 180
Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 91 SQYFDECISFIDEAKRQRGG--VLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSR 148
+Q D+ +S + R+ G + VHC AG R+ ++VA + + GM A+ ++ +
Sbjct: 98 NQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRA-PVLVALALIEGGMKYEDAVQFIRQK 156
Query: 149 R 149
R
Sbjct: 157 R 157
>pdb|3RZ2|A Chain A, Crystal Of Prl-1 Complexed With Peptide
pdb|3RZ2|B Chain B, Crystal Of Prl-1 Complexed With Peptide
Length = 189
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 91 SQYFDECISFIDEAKRQRGG--VLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSR 148
+Q D+ +S + R+ G + VHC AG R+ ++VA + + GM A+ ++ +
Sbjct: 98 NQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRA-PVLVALALIEGGMKYEDAVQFIRQK 156
Query: 149 R 149
R
Sbjct: 157 R 157
>pdb|3V0I|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
256-576, E411f
Length = 324
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 31 PFEIEQGLFLGSIGAASNKDALKSRNITHILTVAN--ALAPAHPNDFVYKVIGVADKEDT 88
P Q LF IG S K + I + + ++ VY+V+ +D
Sbjct: 25 PSSGRQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVM----IDDH 80
Query: 89 NLSQYFDECISFIDEAKRQRGG-----VLVHCFAGRSRSVTIVVAYLMKKHGMSLS-QAM 142
N+ D + FID+AK + +HC G+ R+ T+V ++L++ + +A+
Sbjct: 81 NVPTLVD-LLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLLEDGKFDTAKEAL 139
Query: 143 GHVKSRR 149
+ SRR
Sbjct: 140 EYFGSRR 146
>pdb|2NLK|A Chain A, Crystal Structure Of D1 And D2 Catalytic Domains Of Human
Protein Tyrosine Phosphatase Gamma (D1+d2 Ptprg)
Length = 627
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 87 DTNLSQYFDECISFIDEAKRQR----GGVLVHCFAGRSRSVTIVV--AYLMKKHGMSLSQ 140
D + +Y ++F+ + R G VLVHC AG R+ T +V + L + S
Sbjct: 203 DMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVN 262
Query: 141 AMGHVKSRRPQ 151
+G +K R Q
Sbjct: 263 VLGFLKHIRTQ 273
>pdb|1GWZ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Protein
Tyrosine Phosphatase Shp-1
Length = 299
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 6/36 (16%)
Query: 98 ISFIDEAKRQR------GGVLVHCFAGRSRSVTIVV 127
+SF+D+ +++ G ++VHC AG R+ TI+V
Sbjct: 188 LSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIV 223
>pdb|4GS0|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GS0|B Chain B, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
Length = 308
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 6/36 (16%)
Query: 98 ISFIDEAKRQR------GGVLVHCFAGRSRSVTIVV 127
+SF+D+ +++ G ++VHC AG R+ TI+V
Sbjct: 210 LSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIV 245
>pdb|2HY3|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
pdb|2HY3|B Chain B, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
Length = 313
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 87 DTNLSQYFDECISFIDEAKRQR----GGVLVHCFAGRSRSVTIVV--AYLMKKHGMSLSQ 140
D + +Y ++F+ + R G VLVHC AG R+ T +V + L + S
Sbjct: 211 DXGVPEYALPVLTFVRRSSAARXPETGPVLVHCSAGVGRTGTYIVIDSXLQQIKDKSTVN 270
Query: 141 AMGHVKSRRPQ 151
+G +K R Q
Sbjct: 271 VLGFLKHIRTQ 281
>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1
Length = 532
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 6/36 (16%)
Query: 98 ISFIDEAKRQR------GGVLVHCFAGRSRSVTIVV 127
+SF+D+ +++ G ++VHC AG R+ TI+V
Sbjct: 430 LSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIV 465
>pdb|2PBN|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma
Length = 313
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 87 DTNLSQYFDECISFIDEAKRQR----GGVLVHCFAGRSRSVTIVV--AYLMKKHGMSLSQ 140
D + +Y ++F+ + R G VLVHC AG R+ T +V + L + S
Sbjct: 211 DMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVN 270
Query: 141 AMGHVKSRRPQ 151
+G +K R Q
Sbjct: 271 VLGFLKHIRTQ 281
>pdb|3AXY|C Chain C, Structure Of Florigen Activation Complex Consisting Of
Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd
Homolog Osfd1
pdb|3AXY|D Chain D, Structure Of Florigen Activation Complex Consisting Of
Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd
Homolog Osfd1
pdb|3AXY|I Chain I, Structure Of Florigen Activation Complex Consisting Of
Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd
Homolog Osfd1
pdb|3AXY|J Chain J, Structure Of Florigen Activation Complex Consisting Of
Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd
Homolog Osfd1
Length = 240
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 9/45 (20%)
Query: 67 LAPAHP---------NDFVYKVIGVADKEDTNLSQYFDECISFID 102
LAP HP + F Y+++ DK Q FDE IS +D
Sbjct: 169 LAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELD 213
>pdb|1ZCK|A Chain A, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|B Chain B, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|C Chain C, Native Structure Prl-1 (Ptp4a1)
Length = 154
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 91 SQYFDECISFIDEAKRQRGG--VLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSR 148
+Q D+ +S + R+ G + VHC AG R+ ++VA + + G A+ ++ +
Sbjct: 72 NQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRA-PVLVALALIEGGXKYEDAVQFIRQK 130
Query: 149 R 149
R
Sbjct: 131 R 131
>pdb|3QCM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
pdb|3QCM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
Length = 310
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 87 DTNLSQYFDECISFIDEAKRQR----GGVLVHCFAGRSRSVTIVV--AYLMKKHGMSLSQ 140
D + +Y ++F+ + R G VLVHC AG R+ T +V + L + S
Sbjct: 210 DMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVN 269
Query: 141 AMGHVKSRRPQ 151
+G +K R Q
Sbjct: 270 VLGFLKHIRTQ 280
>pdb|3QCL|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-(4-Hydroxybut-1-Yn-1-
Yl)benzoic Acid
pdb|3QCN|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Trigonal Crystal Form
Length = 310
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 87 DTNLSQYFDECISFIDEAKRQR----GGVLVHCFAGRSRSVTIVV--AYLMKKHGMSLSQ 140
D + +Y ++F+ + R G VLVHC AG R+ T +V + L + S
Sbjct: 210 DMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVN 269
Query: 141 AMGHVKSRRPQ 151
+G +K R Q
Sbjct: 270 VLGFLKHIRTQ 280
>pdb|3PIE|A Chain A, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
pdb|3PIE|B Chain B, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
pdb|3PIE|C Chain C, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
pdb|3PIE|D Chain D, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
pdb|3PIF|A Chain A, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
pdb|3PIF|B Chain B, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
pdb|3PIF|C Chain C, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
pdb|3PIF|D Chain D, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
Length = 1155
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 19/159 (11%)
Query: 3 QMDNAYRNQIAAILRVLNLTTCLREDRVPFEIEQGLFL------GSIGAAS--NKDALKS 54
Q+D Y+ +A + + C+ + +P +E FL +GA+S +LK+
Sbjct: 664 QVDTVYKTPLAGLFNDIEHNHCIEREFIPESMENVKFLFGLPKGAKLGASSLAGFPSLKT 723
Query: 55 RNITHILTVANALAPAHPNDFVYKVIGVADKEDTNLSQYFDECISFIDEAKRQRGGVLV- 113
+T L +++ P+ V+ + D Y + IS D AKR G ++
Sbjct: 724 LPLTAELAYNSSVVFNFPSKQQSMVLHIQD-------LYKENGISLSDLAKRHMGKIVYS 776
Query: 114 -HCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRPQ 151
F S+ ++++ + + G+ S + V R+PQ
Sbjct: 777 RWPFLRESKLLSLITEETVYE-GVK-SGKLTKVIERKPQ 813
>pdb|1RXD|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|C Chain C, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
Length = 159
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 91 SQYFDECISFIDEAKRQRGG--VLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSR 148
+Q D+ +S + R+ G + VHC AG R+ ++VA + + G A+ ++ +
Sbjct: 77 NQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRA-PVLVALALIEGGXKYEDAVQFIRQK 135
Query: 149 R 149
R
Sbjct: 136 R 136
>pdb|3QCB|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCB|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCC|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCC|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCD|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Trigonal Crystal Form
pdb|3QCE|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCE|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCF|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCF|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCG|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3-Bromo-4-Chlorobenzyl)sulfanyl]thiophene-2-
Carboxylic Acid
pdb|3QCH|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]-N-(Methylsulfonyl)
Thiophene-2-Carboxamide
pdb|3QCI|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
N-[(3-Aminophenyl)sulfonyl]-3-[(3,4-Dichlorobenzyl)
Sulfanyl]thiophene-2-Carboxamide
pdb|3QCJ|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
5-[({3-[(3,4-Dichlorobenzyl)sulfanyl]thiophen-2-
Yl}carbonyl)sulfamoyl]-2-Methoxybenzoic Acid
pdb|3QCK|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]benzoic Acid
Length = 310
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 87 DTNLSQYFDECISFIDEAKRQR----GGVLVHCFAGRSRSVTIVV--AYLMKKHGMSLSQ 140
D + +Y ++F+ + R G VLVHC AG R+ T +V + L + S
Sbjct: 210 DMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVN 269
Query: 141 AMGHVKSRRPQ 151
+G +K R Q
Sbjct: 270 VLGFLKHIRTQ 280
>pdb|2H4V|A Chain A, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
pdb|2H4V|B Chain B, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
Length = 320
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 87 DTNLSQYFDECISFIDEAKRQR----GGVLVHCFAGRSRSVTIVV--AYLMKKHGMSLSQ 140
D + +Y ++F+ + R G VLVHC AG R+ T +V + L + S
Sbjct: 221 DMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVN 280
Query: 141 AMGHVKSRRPQ 151
+G +K R Q
Sbjct: 281 VLGFLKHIRTQ 291
>pdb|2C46|A Chain A, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|B Chain B, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|C Chain C, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|D Chain D, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
Length = 241
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 113 VHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRP 150
VHC G +R+ ++ A+L++K S+ A+ RP
Sbjct: 146 VHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARP 183
>pdb|2JJD|A Chain A, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|B Chain B, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|C Chain C, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|D Chain D, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|E Chain E, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|F Chain F, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
Length = 599
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 109 GGVLVHCFAGRSRSVTIVV-----AYLMKKHGMSLSQAMGHVKSRRPQ 151
G ++VHC AG R+ T +V A + + + + + + ++++RPQ
Sbjct: 224 GPIVVHCSAGVGRTGTFIVIDAMMAMMHAEQKVDVFEFVSRIRNQRPQ 271
>pdb|1I9S|A Chain A, Crystal Structure Of The Rna Triphosphatase Domain Of
Mouse Mrna Capping Enzyme
Length = 210
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 113 VHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRRP 150
VHC G +R+ ++ A+L++K S+ A+ RP
Sbjct: 124 VHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARP 161
>pdb|1V3A|A Chain A, Structure Of Human Prl-3, The Phosphatase Associated With
Cancer Metastasis
Length = 173
Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 111 VLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRR 149
V VHC AG R+ ++VA + + GM A+ ++ +R
Sbjct: 100 VAVHCVAGLGRA-PVLVALALIESGMKYEDAIQFIRQKR 137
>pdb|1R6H|A Chain A, Solution Structure Of Human Prl-3
Length = 172
Score = 26.6 bits (57), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 111 VLVHCFAGRSRSVTIVVAYLMKKHGMSLSQAMGHVKSRR 149
V VHC AG R+ ++VA + + GM A+ ++ +R
Sbjct: 103 VAVHCVAGLGRA-PVLVALALIESGMKYEDAIQFIRQKR 140
>pdb|2WZ1|A Chain A, Structure Of The Catalytic Domain Of Human Soluble
Guanylate Cyclase 1 Beta 3.
pdb|2WZ1|B Chain B, Structure Of The Catalytic Domain Of Human Soluble
Guanylate Cyclase 1 Beta 3
Length = 219
Score = 26.2 bits (56), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 38 LFLGSIG-------AASNKDALKSRNITHIL-TVANALAPAHPNDFVYKVIGVADKEDTN 89
LF G +G AS + A+K N+ + L T + L + N FVYKV V DK T
Sbjct: 16 LFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLTDSRKNPFVYKVETVGDKYMT- 74
Query: 90 LSQYFDECI 98
+S + CI
Sbjct: 75 VSGLPEPCI 83
>pdb|3UVJ|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1.
pdb|3UVJ|D Chain D, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1
Length = 220
Score = 26.2 bits (56), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 38 LFLGSIG-------AASNKDALKSRNITH-ILTVANALAPAHPNDFVYKVIGVADKEDTN 89
LF G +G AS + A+K N+ + + T + L + N FVYKV V DK T
Sbjct: 17 LFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLTDSRKNPFVYKVETVCDKYMT- 75
Query: 90 LSQYFDECI 98
+S + CI
Sbjct: 76 VSGLPEPCI 84
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,280,876
Number of Sequences: 62578
Number of extensions: 150614
Number of successful extensions: 523
Number of sequences better than 100.0: 77
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 462
Number of HSP's gapped (non-prelim): 78
length of query: 173
length of database: 14,973,337
effective HSP length: 92
effective length of query: 81
effective length of database: 9,216,161
effective search space: 746509041
effective search space used: 746509041
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)