Query 030716
Match_columns 173
No_of_seqs 75 out of 77
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 05:02:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030716.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030716hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nkpa_ a.38.1.1 (A:) Myc prot 55.1 3.9 0.00028 26.6 2.7 39 129-167 22-60 (88)
2 d1dlca3 f.1.3.1 (A:61-289) del 51.9 2.1 0.00015 32.5 1.0 44 124-167 38-93 (229)
3 d1wzda1 a.132.1.1 (A:7-213) He 40.2 24 0.0017 25.1 5.2 45 121-166 152-200 (207)
4 d2o3la1 a.69.4.1 (A:14-95) Hyp 39.8 17 0.0013 24.0 4.1 41 130-170 18-58 (82)
5 d1nkpb_ a.38.1.1 (B:) Max prot 33.1 13 0.00093 23.7 2.5 38 129-167 18-55 (83)
6 d2o4ta1 a.69.4.1 (A:16-105) Un 32.7 28 0.002 23.3 4.3 41 130-170 14-54 (90)
7 d1nlwa_ a.38.1.1 (A:) Mad prot 31.6 15 0.0011 23.0 2.6 38 130-167 18-55 (79)
8 d1mdya_ a.38.1.1 (A:) Myod B/H 28.3 23 0.0017 22.1 3.0 38 129-167 28-65 (68)
9 d1fyva_ c.23.2.1 (A:) Toll-lik 26.6 14 0.0011 25.5 2.0 21 122-142 130-155 (161)
10 d1iv0a_ c.55.3.8 (A:) Hypothet 22.1 34 0.0025 22.5 3.1 27 97-124 6-32 (98)
11 d1sk7a_ a.132.1.2 (A:) Heme ox 21.3 79 0.0057 22.0 5.2 44 121-165 133-179 (187)
No 1
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.09 E-value=3.9 Score=26.58 Aligned_cols=39 Identities=18% Similarity=0.169 Sum_probs=28.6
Q ss_pred CchHHHHHHhhccCCCCChhHHHHHHHHHHHHHHHHHhc
Q 030716 129 KDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQS 167 (173)
Q Consensus 129 ~DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIIN~WQe~ 167 (173)
+|+.++|+..|-.-+==....+..||+.|.+-|++.|+.
T Consensus 22 n~~f~~Lr~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~ 60 (88)
T d1nkpa_ 22 KRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAE 60 (88)
T ss_dssp HHHHHHHHTTCGGGTTCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCccCHHHHHHHHHHHHHHHHHH
Confidence 467888988874321112356999999999999998874
No 2
>d1dlca3 f.1.3.1 (A:61-289) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]}
Probab=51.91 E-value=2.1 Score=32.49 Aligned_cols=44 Identities=18% Similarity=0.462 Sum_probs=27.9
Q ss_pred ccccCCchHHHHHHhhccC--CCCChhHHHHH----------HHHHHHHHHHHHhc
Q 030716 124 FFWPRKDAWEELKTTLESK--PWISQKMMIIL----------LNQATDIINLWQQS 167 (173)
Q Consensus 124 fFWPr~DAWEeLK~eLEsK--~WIs~~e~i~l----------LNq~TeIIN~WQe~ 167 (173)
+|||.+|-|+++....|.- .=|++..+-.+ ++.+.+.++-|++.
T Consensus 38 ~lwP~~~~w~~~~~~ve~lId~~i~~~~~~~~~~~l~gL~~~l~~Y~~al~~w~~n 93 (229)
T d1dlca3 38 TIWPSEDPWKAFMEQVEALMDQKIADYAKNKALAELQGLQNNVEDYVSALSSWQKN 93 (229)
T ss_dssp HTSSSHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4599999999999888752 22455544333 34445556667664
No 3
>d1wzda1 a.132.1.1 (A:7-213) Heme oxygenase HmuO {Corynebacterium diphtheriae [TaxId: 1717]}
Probab=40.17 E-value=24 Score=25.07 Aligned_cols=45 Identities=20% Similarity=0.253 Sum_probs=34.9
Q ss_pred cccccccCC-c---hHHHHHHhhccCCCCChhHHHHHHHHHHHHHHHHHh
Q 030716 121 SQYFFWPRK-D---AWEELKTTLESKPWISQKMMIILLNQATDIINLWQQ 166 (173)
Q Consensus 121 T~YfFWPr~-D---AWEeLK~eLEsK~WIs~~e~i~lLNq~TeIIN~WQe 166 (173)
+.||+++.. | -|+.+|..|+.-. .++.++-.++..+..+..+..+
T Consensus 152 ~~fy~f~~~~~~~~~k~~~r~~l~~~~-~~~~~~~~ii~eA~~aF~~~~~ 200 (207)
T d1wzda1 152 LGFYHFEGIAKLKVYKDEYREKLNNLE-LSDEQREHLLKEATDAFVFNHQ 200 (207)
T ss_dssp CGGGCCTTCSCHHHHHHHHHHHHHTCC-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCcCCHHHHHHHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 357777764 3 2899999999876 6788999999999888876543
No 4
>d2o3la1 a.69.4.1 (A:14-95) Hypothetical protein BCE3448 {Bacillus cereus [TaxId: 1396]}
Probab=39.83 E-value=17 Score=24.05 Aligned_cols=41 Identities=7% Similarity=0.029 Sum_probs=34.8
Q ss_pred chHHHHHHhhccCCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q 030716 130 DAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQSGGN 170 (173)
Q Consensus 130 DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIIN~WQe~~~~ 170 (173)
-+|++|+.+|=...=+++.+...||+.+.+.+---|..|++
T Consensus 18 ~~y~~i~~YL~~~~~~~~~~~~~il~dil~l~eea~~~G~~ 58 (82)
T d2o3la1 18 FVFKKIQNYMWNFSAGNGMDMLHIQYELIDLFEAGAAEGRQ 58 (82)
T ss_dssp HHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 48999999995555568999999999999999888888865
No 5
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.15 E-value=13 Score=23.66 Aligned_cols=38 Identities=21% Similarity=0.333 Sum_probs=28.9
Q ss_pred CchHHHHHHhhccCCCCChhHHHHHHHHHHHHHHHHHhc
Q 030716 129 KDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQS 167 (173)
Q Consensus 129 ~DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIIN~WQe~ 167 (173)
++++++|+..|.+-+ -...+++.||..|.+.|.+.|+.
T Consensus 18 n~~f~~L~~llP~~~-~~k~sK~~iL~~A~~yI~~L~~~ 55 (83)
T d1nkpb_ 18 KDSFHSLRDSVPSLQ-GEKASRAQILDKATEYIQYMRRK 55 (83)
T ss_dssp HHHHHHHHTTSGGGT-TSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 467889999886422 12458999999999999988764
No 6
>d2o4ta1 a.69.4.1 (A:16-105) Uncharacterized protein BH3976 {Bacillus halodurans [TaxId: 86665]}
Probab=32.71 E-value=28 Score=23.29 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=34.5
Q ss_pred chHHHHHHhhccCCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q 030716 130 DAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQSGGN 170 (173)
Q Consensus 130 DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIIN~WQe~~~~ 170 (173)
-+|++|..+|-...=++..+...||+.+.+.+--.|..|++
T Consensus 14 ~~y~~i~~YL~~~~~~~~~~~~~il~dil~lleea~~~G~~ 54 (90)
T d2o4ta1 14 IVYKEIQKYLFKVGPVELNEGIGLLSEILGFFEEGAAAGKG 54 (90)
T ss_dssp HHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 47999999995554448999999999999999998888865
No 7
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.64 E-value=15 Score=23.03 Aligned_cols=38 Identities=26% Similarity=0.194 Sum_probs=27.3
Q ss_pred chHHHHHHhhccCCCCChhHHHHHHHHHHHHHHHHHhc
Q 030716 130 DAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQS 167 (173)
Q Consensus 130 DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIIN~WQe~ 167 (173)
++-++|+..|-.-+=-....+..||+.|++-|.+=|+.
T Consensus 18 ~~f~~L~~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~ 55 (79)
T d1nlwa_ 18 LSLEKLKGLVPLGPDSSRHTTLSLLTKAKLHIKKLEDS 55 (79)
T ss_dssp HHHHHHHHSSCCCSSSCCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 55677888774322223457899999999999987764
No 8
>d1mdya_ a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.27 E-value=23 Score=22.06 Aligned_cols=38 Identities=26% Similarity=0.293 Sum_probs=29.2
Q ss_pred CchHHHHHHhhccCCCCChhHHHHHHHHHHHHHHHHHhc
Q 030716 129 KDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQS 167 (173)
Q Consensus 129 ~DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIIN~WQe~ 167 (173)
+++.++|+..|-+-+ ...-++..+|..|.+-|.+=|+.
T Consensus 28 n~~~~~L~~llP~~~-~~k~sK~~iL~~Ai~YI~~Lq~~ 65 (68)
T d1mdya_ 28 NEAFETLKRSTSSNP-NQRLPKVEILRNAIRYIEGLQAL 65 (68)
T ss_dssp HHHHHHHHTTSCSCT-TSCCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 467889998886543 23448999999999999887763
No 9
>d1fyva_ c.23.2.1 (A:) Toll-like receptor 1, TLR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.65 E-value=14 Score=25.54 Aligned_cols=21 Identities=29% Similarity=0.972 Sum_probs=17.3
Q ss_pred ccccccCCch-----HHHHHHhhccC
Q 030716 122 QYFFWPRKDA-----WEELKTTLESK 142 (173)
Q Consensus 122 ~YfFWPr~DA-----WEeLK~eLEsK 142 (173)
+|.-||+.+. |++|+..|..|
T Consensus 130 ~~l~W~~~~~~~~~FW~~L~~aL~~~ 155 (161)
T d1fyva_ 130 TYLEWPKEKSKRGLFWANLRAAINIK 155 (161)
T ss_dssp CCEECCSSGGGSSHHHHHHHHHHHSC
T ss_pred CeEeCCCCcchhHHHHHHHHHHCCCC
Confidence 5889998765 99999998765
No 10
>d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]}
Probab=22.15 E-value=34 Score=22.48 Aligned_cols=27 Identities=19% Similarity=-0.060 Sum_probs=20.3
Q ss_pred EEeecCceeEEeeeeecCCCCccCcccc
Q 030716 97 FIWMEKNIGLALDQSIPGYGTIPLSQYF 124 (173)
Q Consensus 97 ~LWlek~IgiAlDQ~v~g~~t~PLT~Yf 124 (173)
+=+-++.||||+=+-. +.-.+||..+.
T Consensus 6 lD~G~kriGiAisd~~-~~~a~pl~~i~ 32 (98)
T d1iv0a_ 6 LDVGEARIGLAVGEEG-VPLASGRGYLV 32 (98)
T ss_dssp EEESSSEEEEEEECSC-CSSCCCEEEEE
T ss_pred EEcCCCEEEEEEecCC-CCeEcceEEEE
Confidence 3456899999998876 66677887664
No 11
>d1sk7a_ a.132.1.2 (A:) Heme oxygenase HemO (PigA) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=21.34 E-value=79 Score=21.99 Aligned_cols=44 Identities=14% Similarity=0.256 Sum_probs=33.7
Q ss_pred cccccccCCc---hHHHHHHhhccCCCCChhHHHHHHHHHHHHHHHHH
Q 030716 121 SQYFFWPRKD---AWEELKTTLESKPWISQKMMIILLNQATDIINLWQ 165 (173)
Q Consensus 121 T~YfFWPr~D---AWEeLK~eLEsK~WIs~~e~i~lLNq~TeIIN~WQ 165 (173)
+.||.++..+ -|...+..|+.-++ ++.++-.+++.+.....+=+
T Consensus 133 ~~f~~~~~~~~~~~w~~f~~~L~~~~~-~~~~~~~~i~~A~~aF~~~~ 179 (187)
T d1sk7a_ 133 ARHLAEPEGGRAQGWKSFVAILDGIEL-NEEEERLAAKGASDAFNRFG 179 (187)
T ss_dssp CGGGSCCTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcccHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 3577776543 69999999999774 88888889988887765543
Done!