Your job contains 1 sequence.
>030717
MKEEQVITSIQCPTRLATIYRLSPLKSFHWKQQLSMELELQKYDTYNVLCLPVSLGFFHA
AVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYF
GKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESMED
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030717
(172 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2155332 - symbol:CYTC6A "cytochrome c6A" speci... 487 1.8e-46 1
TIGR_CMR|GSU_2743 - symbol:GSU_2743 "cytochrome c family ... 114 6.1e-07 1
TIGR_CMR|GSU_2432 - symbol:GSU_2432 "cytochrome c family ... 106 4.3e-06 1
>TAIR|locus:2155332 [details] [associations]
symbol:CYTC6A "cytochrome c6A" species:3702 "Arabidopsis
thaliana" [GO:0005506 "iron ion binding" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0020037 "heme binding"
evidence=IEA] InterPro:IPR009056 PROSITE:PS51007 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009055 GO:GO:0046872 GO:GO:0020037
GO:GO:0022900 GO:GO:0015979 SUPFAM:SSF46626 GO:GO:0009543
EMBL:AJ438488 EMBL:AB010693 EMBL:AY057729 EMBL:AF372903
IPI:IPI00526595 RefSeq:NP_568640.1 UniGene:At.30036
UniGene:At.49131 PDB:2CE0 PDB:2CE1 PDB:2DGE PDB:2V07 PDBsum:2CE0
PDBsum:2CE1 PDBsum:2DGE PDBsum:2V07 ProteinModelPortal:Q93VA3
SMR:Q93VA3 STRING:Q93VA3 PRIDE:Q93VA3 EnsemblPlants:AT5G45040.1
GeneID:834535 KEGG:ath:AT5G45040 GeneFarm:1824 TAIR:At5g45040
eggNOG:COG2010 HOGENOM:HOG000242384 InParanoid:Q93VA3 KO:K08906
OMA:HEEAIVA PhylomeDB:Q93VA3 ProtClustDB:CLSN2689931
EvolutionaryTrace:Q93VA3 Genevestigator:Q93VA3 GermOnline:AT5G45040
Uniprot:Q93VA3
Length = 175
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 86/107 (80%), Positives = 97/107 (90%)
Query: 63 SLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGK 122
SL QT+DIQ+G +LF +ACIGCHD GGN+IQPGATLF KDL+RNGVDTE+EIY VTYFGK
Sbjct: 68 SLGQTLDIQRGATLFNRACIGCHDTGGNIIQPGATLFTKDLERNGVDTEEEIYRVTYFGK 127
Query: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIES 169
GRMPGFGEKCTPRGQCTFG RLQDE+IKLLA+FVK QADQGWP + +
Sbjct: 128 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPTVST 174
>TIGR_CMR|GSU_2743 [details] [associations]
symbol:GSU_2743 "cytochrome c family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR009056 PROSITE:PS51007
GO:GO:0009055 GO:GO:0020037 EMBL:AE017180 GenomeReviews:AE017180_GR
SUPFAM:SSF46626 RefSeq:NP_953788.1 ProteinModelPortal:Q749J9
GeneID:2685990 KEGG:gsu:GSU2743 PATRIC:22028327
HOGENOM:HOG000254790 OMA:AKMRNPG ProtClustDB:CLSK828832
BioCyc:GSUL243231:GH27-2725-MONOMER Uniprot:Q749J9
Length = 111
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 53 VSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTED 112
V L F A+ D+++G LF+Q C CH GGN++ P L + L+ N + +
Sbjct: 14 VGLSFGVASAKGKGDKDLKRGEELFKQHCAVCHPEGGNIVNPQKPLGKESLKANKITSWK 73
Query: 113 EIYHVTYFGKGRMPGFGEKCTPRGQCTFGAR-LQDEDIKLLAQFV 156
+I R PG P G TF A+ + D+D KL+A+++
Sbjct: 74 DIVKTM-----RNPG------P-GMSTFDAKAIPDKDAKLVAEYI 106
>TIGR_CMR|GSU_2432 [details] [associations]
symbol:GSU_2432 "cytochrome c family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR009056 PROSITE:PS51007
GO:GO:0009055 GO:GO:0046872 GO:GO:0020037 EMBL:AE017180
GenomeReviews:AE017180_GR SUPFAM:SSF46626 TCDB:5.B.3.1.1
HOGENOM:HOG000254790 RefSeq:NP_953478.1 PDB:3CU4 PDB:3DP5
PDBsum:3CU4 PDBsum:3DP5 ProteinModelPortal:Q74AE4 GeneID:2686498
KEGG:gsu:GSU2432 PATRIC:22027713
BioCyc:GSUL243231:GH27-2427-MONOMER EvolutionaryTrace:Q74AE4
Uniprot:Q74AE4
Length = 104
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 25/63 (39%), Positives = 30/63 (47%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDT-EDEIYHVTYFGKGRMPGFGEK 131
G LF C GCH GGN + P TL + NG+ T D ++ G G MP FGE
Sbjct: 27 GGELFATHCAGCHPQGGNTVHPEKTLARARREANGIRTVRDVAAYIRNPGPG-MPAFGEA 85
Query: 132 CTP 134
P
Sbjct: 86 MIP 88
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 172 172 0.00093 108 3 11 22 0.38 32
31 0.48 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 592 (63 KB)
Total size of DFA: 160 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.97u 0.12s 15.09t Elapsed: 00:00:01
Total cpu time: 14.97u 0.12s 15.09t Elapsed: 00:00:01
Start: Mon May 20 18:29:33 2013 End: Mon May 20 18:29:34 2013