BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030717
(172 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224109570|ref|XP_002333234.1| predicted protein [Populus trichocarpa]
gi|222835556|gb|EEE73991.1| predicted protein [Populus trichocarpa]
Length = 159
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 90/114 (78%), Positives = 100/114 (87%)
Query: 59 HAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVT 118
+ VSL QT+D+Q+G SLF + CIGCHD GGN+IQPGATLF KDLQRNGVDTE+EIY +T
Sbjct: 46 NTPVSLGQTLDVQRGASLFSRTCIGCHDAGGNIIQPGATLFTKDLQRNGVDTEEEIYRMT 105
Query: 119 YFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESMED 172
YFGKGRMPGFGE CTPRGQCTFG RLQDE+IKLLAQFVKSQADQGWP IE +D
Sbjct: 106 YFGKGRMPGFGESCTPRGQCTFGPRLQDEEIKLLAQFVKSQADQGWPNIEISQD 159
>gi|359473056|ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isoform 1 [Vitis vinifera]
Length = 167
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 90/114 (78%), Positives = 101/114 (88%)
Query: 59 HAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVT 118
+ VSLAQT DIQ+G +LF +ACIGCHD GGN+IQPGATLFLKDLQRNGVDTE+EIY VT
Sbjct: 54 NTPVSLAQTTDIQRGAALFGRACIGCHDAGGNIIQPGATLFLKDLQRNGVDTEEEIYRVT 113
Query: 119 YFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESMED 172
Y+GKGRMPGFGE CTPRGQCTFGARLQ+E+IKLLA+FVK QADQGWP +E D
Sbjct: 114 YYGKGRMPGFGENCTPRGQCTFGARLQEEEIKLLAEFVKLQADQGWPNLEISGD 167
>gi|359473054|ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isoform 2 [Vitis vinifera]
gi|297737964|emb|CBI27165.3| unnamed protein product [Vitis vinifera]
Length = 173
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 90/114 (78%), Positives = 101/114 (88%)
Query: 59 HAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVT 118
+ VSLAQT DIQ+G +LF +ACIGCHD GGN+IQPGATLFLKDLQRNGVDTE+EIY VT
Sbjct: 60 NTPVSLAQTTDIQRGAALFGRACIGCHDAGGNIIQPGATLFLKDLQRNGVDTEEEIYRVT 119
Query: 119 YFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESMED 172
Y+GKGRMPGFGE CTPRGQCTFGARLQ+E+IKLLA+FVK QADQGWP +E D
Sbjct: 120 YYGKGRMPGFGENCTPRGQCTFGARLQEEEIKLLAEFVKLQADQGWPNLEISGD 173
>gi|388509494|gb|AFK42813.1| unknown [Medicago truncatula]
Length = 173
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 89/135 (65%), Positives = 110/135 (81%), Gaps = 6/135 (4%)
Query: 41 QKYDTYNVLCLPVSLGFFHAA------VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQP 94
Q+ +N L P++ F ++ VS+AQT+DIQ+G +LF Q CIGCHD GGN+IQP
Sbjct: 36 QQVKFFNNLAPPLAAAFLLSSPICATPVSIAQTIDIQRGATLFSQTCIGCHDAGGNIIQP 95
Query: 95 GATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQ 154
G+TLF KDLQRNGVDTE+EIY VTY+GKGRMPGFG++C PRGQCTFGARL+DEDIK+LA+
Sbjct: 96 GSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGFGKECMPRGQCTFGARLEDEDIKILAE 155
Query: 155 FVKSQADQGWPKIES 169
FVK QAD+GWP IE+
Sbjct: 156 FVKLQADKGWPSIET 170
>gi|147798986|emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera]
Length = 125
Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 90/114 (78%), Positives = 101/114 (88%)
Query: 59 HAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVT 118
+ VSLAQT DIQ+G +LF +ACIGCHD GGN+IQPGATLFLKDLQRNGVDTE+EIY VT
Sbjct: 12 NTPVSLAQTTDIQRGAALFGRACIGCHDAGGNIIQPGATLFLKDLQRNGVDTEEEIYRVT 71
Query: 119 YFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESMED 172
Y+GKGRMPGFGE CTPRGQCTFGARLQ+E+IKLLA+FVK QADQGWP +E D
Sbjct: 72 YYGKGRMPGFGENCTPRGQCTFGARLQEEEIKLLAEFVKLQADQGWPNLEISGD 125
>gi|357475185|ref|XP_003607878.1| Cytochrome c6 [Medicago truncatula]
gi|124359658|gb|ABN06030.1| Cytochrome c, monohaem [Medicago truncatula]
gi|355508933|gb|AES90075.1| Cytochrome c6 [Medicago truncatula]
Length = 173
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/135 (65%), Positives = 108/135 (80%), Gaps = 6/135 (4%)
Query: 41 QKYDTYNVLCLPVSLGFF------HAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQP 94
Q+ +N L P++ F VS+AQT+DIQ+G +LF Q CIGCHD GGN+IQP
Sbjct: 36 QQVKFFNNLAPPLAAAFLLFSPICATPVSIAQTIDIQRGATLFSQTCIGCHDAGGNIIQP 95
Query: 95 GATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQ 154
G+TLF KDLQRNGVDTE+EIY VTY+GKGRMPGFG++C PRGQCTFGARL+DEDIK+LA+
Sbjct: 96 GSTLFTKDLQRNGVDTEEEIYRVTYYGKGRMPGFGKECMPRGQCTFGARLEDEDIKILAE 155
Query: 155 FVKSQADQGWPKIES 169
FVK QAD+GWP IE+
Sbjct: 156 FVKLQADKGWPSIET 170
>gi|10177496|dbj|BAB10887.1| unnamed protein product [Arabidopsis thaliana]
Length = 151
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/145 (67%), Positives = 115/145 (79%), Gaps = 5/145 (3%)
Query: 29 HWKQ---QLSMELELQKYDTYNVLCLPVSLGFFHAAV-SLAQTVDIQKGVSLFRQACIGC 84
+WKQ Q +EL L+ NV + VS + + V SL QT+DIQ+G +LF +ACIGC
Sbjct: 7 NWKQRCNQCIVELLLELKYVLNVF-MKVSCFYGYCGVESLGQTLDIQRGATLFNRACIGC 65
Query: 85 HDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARL 144
HD GGN+IQPGATLF KDL+RNGVDTE+EIY VTYFGKGRMPGFGEKCTPRGQCTFG RL
Sbjct: 66 HDTGGNIIQPGATLFTKDLERNGVDTEEEIYRVTYFGKGRMPGFGEKCTPRGQCTFGPRL 125
Query: 145 QDEDIKLLAQFVKSQADQGWPKIES 169
QDE+IKLLA+FVK QADQGWP + +
Sbjct: 126 QDEEIKLLAEFVKFQADQGWPTVST 150
>gi|224134402|ref|XP_002321813.1| predicted protein [Populus trichocarpa]
gi|222868809|gb|EEF05940.1| predicted protein [Populus trichocarpa]
Length = 110
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/110 (80%), Positives = 98/110 (89%)
Query: 63 SLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGK 122
SL QT+D+Q+G SLF + CIGCHD GGN+IQPGATLF KDLQRNGVDTE+EIY +TYFGK
Sbjct: 1 SLGQTLDVQRGASLFSRTCIGCHDAGGNIIQPGATLFTKDLQRNGVDTEEEIYRITYFGK 60
Query: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESMED 172
GRMPGFGE CTPRGQCTFG RLQDE+IKLLAQFVKSQADQGWP IE +D
Sbjct: 61 GRMPGFGESCTPRGQCTFGPRLQDEEIKLLAQFVKSQADQGWPNIEISQD 110
>gi|18422509|ref|NP_568640.1| cytochrome c6 [Arabidopsis thaliana]
gi|27805454|sp|Q93VA3.1|CYC6_ARATH RecName: Full=Cytochrome c6, chloroplastic; AltName:
Full=Cytochrome c-552; Short=Atc6; AltName:
Full=Cytochrome c-553; AltName: Full=Cytochrome c553;
AltName: Full=Soluble cytochrome f; Flags: Precursor
gi|13926305|gb|AAK49619.1|AF372903_1 AT5g45040/K21C13_23 [Arabidopsis thaliana]
gi|16323250|gb|AAL15359.1| AT5g45040/K21C13_23 [Arabidopsis thaliana]
gi|19571824|emb|CAD27418.1| c6 type cytochrome [Arabidopsis thaliana]
gi|332007810|gb|AED95193.1| cytochrome c6 [Arabidopsis thaliana]
Length = 175
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 97/107 (90%)
Query: 63 SLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGK 122
SL QT+DIQ+G +LF +ACIGCHD GGN+IQPGATLF KDL+RNGVDTE+EIY VTYFGK
Sbjct: 68 SLGQTLDIQRGATLFNRACIGCHDTGGNIIQPGATLFTKDLERNGVDTEEEIYRVTYFGK 127
Query: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIES 169
GRMPGFGEKCTPRGQCTFG RLQDE+IKLLA+FVK QADQGWP + +
Sbjct: 128 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPTVST 174
>gi|297794803|ref|XP_002865286.1| electron transporter protein [Arabidopsis lyrata subsp. lyrata]
gi|297311121|gb|EFH41545.1| electron transporter protein [Arabidopsis lyrata subsp. lyrata]
Length = 176
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 85/107 (79%), Positives = 97/107 (90%)
Query: 63 SLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGK 122
SL QT+DIQ+G +LF +ACIGCHD GGN+IQPGATLF KDL+RNGVDTE+EIY VTYFGK
Sbjct: 69 SLGQTLDIQRGATLFNRACIGCHDTGGNIIQPGATLFTKDLERNGVDTEEEIYRVTYFGK 128
Query: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIES 169
GRMPGFGEKCTPRGQCTFG RLQDE+IKLLA+FVK QAD+GWP + +
Sbjct: 129 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADKGWPNVST 175
>gi|297791301|ref|XP_002863535.1| cytochrome c6 [Arabidopsis lyrata subsp. lyrata]
gi|297309370|gb|EFH39794.1| cytochrome c6 [Arabidopsis lyrata subsp. lyrata]
Length = 176
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/107 (78%), Positives = 96/107 (89%)
Query: 63 SLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGK 122
SL QT+DIQ+G +LF +ACIGCHD GGN+IQP ATLF KDL+RNGVDTE+EIY VTYFGK
Sbjct: 69 SLGQTLDIQRGATLFNRACIGCHDTGGNIIQPVATLFTKDLERNGVDTEEEIYRVTYFGK 128
Query: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIES 169
GRMPGFGEKCTPRGQCTFG RLQDE+IKLLA+FVK QAD+GWP + +
Sbjct: 129 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADKGWPNVST 175
>gi|356577115|ref|XP_003556673.1| PREDICTED: cytochrome c6, chloroplastic-like [Glycine max]
Length = 173
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/112 (76%), Positives = 97/112 (86%), Gaps = 1/112 (0%)
Query: 62 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQP-GATLFLKDLQRNGVDTEDEIYHVTYF 120
VS AQTVDIQ+G +LFRQACIGCHD GGN+IQP ATLF KDLQRN VDTE+ IY VTY+
Sbjct: 62 VSSAQTVDIQRGTTLFRQACIGCHDAGGNIIQPVRATLFTKDLQRNEVDTEEAIYRVTYY 121
Query: 121 GKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESMED 172
GK RMPGFG++C PRGQCTFGARL+DEDIK LA+FVK QADQGWP IE+ E+
Sbjct: 122 GKARMPGFGKECMPRGQCTFGARLEDEDIKTLAEFVKLQADQGWPSIETKEE 173
>gi|117667932|gb|ABK56012.1| electron transporter protein [Brassica rapa]
Length = 174
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 95/107 (88%)
Query: 63 SLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGK 122
SL QT+DIQ+G ++F +ACIGCHD GGN+IQPGATLF DLQRNGVDTE+EIY VTYFGK
Sbjct: 67 SLGQTLDIQRGATVFNRACIGCHDTGGNIIQPGATLFPSDLQRNGVDTEEEIYRVTYFGK 126
Query: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIES 169
GRMPGFGEKCTPRGQCTFG RLQDE+IKLL++FVK QAD GWP + +
Sbjct: 127 GRMPGFGEKCTPRGQCTFGPRLQDEEIKLLSEFVKLQADLGWPNVST 173
>gi|110591227|pdb|2DGE|A Chain A, Crystal Structure Of Oxidized Cytochrome C6a From
Arabidopsis Thaliana
gi|110591228|pdb|2DGE|B Chain B, Crystal Structure Of Oxidized Cytochrome C6a From
Arabidopsis Thaliana
gi|110591229|pdb|2DGE|C Chain C, Crystal Structure Of Oxidized Cytochrome C6a From
Arabidopsis Thaliana
gi|110591230|pdb|2DGE|D Chain D, Crystal Structure Of Oxidized Cytochrome C6a From
Arabidopsis Thaliana
Length = 105
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 95/104 (91%)
Query: 66 QTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRM 125
QT+DIQ+G +LF +ACIGCHD GGN+IQPGATLF KDL+RNGVDTE+EIY VTYFGKGRM
Sbjct: 1 QTLDIQRGATLFNRACIGCHDTGGNIIQPGATLFTKDLERNGVDTEEEIYRVTYFGKGRM 60
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIES 169
PGFGEKCTPRGQCTFG RLQDE+IKLLA+FVK QADQGWP + +
Sbjct: 61 PGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPTVST 104
>gi|388514229|gb|AFK45176.1| unknown [Lotus japonicus]
Length = 175
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 97/110 (88%)
Query: 62 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFG 121
VS QT+DIQ+G +LFR+ACIGCHD GGN+IQPG+TL+ KDLQRNGVDTE+ IY ++Y+G
Sbjct: 65 VSSGQTIDIQRGATLFRKACIGCHDAGGNIIQPGSTLYTKDLQRNGVDTEEAIYRISYYG 124
Query: 122 KGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESME 171
K RMPGFG++C PRGQCTFGARL+DEDIKLLA+FVK QA++GWP IE E
Sbjct: 125 KERMPGFGKECMPRGQCTFGARLEDEDIKLLAEFVKLQANKGWPSIELQE 174
>gi|242050596|ref|XP_002463042.1| hypothetical protein SORBIDRAFT_02g036670 [Sorghum bicolor]
gi|241926419|gb|EER99563.1| hypothetical protein SORBIDRAFT_02g036670 [Sorghum bicolor]
Length = 190
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 82/113 (72%), Positives = 98/113 (86%)
Query: 60 AAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTY 119
AA+S A + +G +LFR+ACIGCHD GGN++QPGATLFLKDL+RNGV TE+E+Y++TY
Sbjct: 78 AAISPAFAQPVSEGAALFRKACIGCHDMGGNILQPGATLFLKDLERNGVATEEELYNITY 137
Query: 120 FGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESMED 172
+GKGRMPGFGEKCTPRGQCTFG RL ++DIKLLA FVKSQA+ GWPKIE ED
Sbjct: 138 YGKGRMPGFGEKCTPRGQCTFGPRLSEDDIKLLASFVKSQAENGWPKIEGDED 190
>gi|112490145|pdb|2CE0|A Chain A, Structure Of Oxidized Arabidopsis Thaliana Cytochrome 6a
gi|112490147|pdb|2CE1|A Chain A, Structure Of Reduced Arabidopsis Thaliana Cytochrome 6a
Length = 105
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/104 (78%), Positives = 93/104 (89%)
Query: 66 QTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRM 125
QT+DIQ+G +LF +AC CHD GGN+IQPGATLF KDL+RNGVDTE+EIY VTYFGKGRM
Sbjct: 1 QTLDIQRGATLFNRACAACHDTGGNIIQPGATLFTKDLERNGVDTEEEIYRVTYFGKGRM 60
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIES 169
PGFGEKCTPRGQCTFG RLQDE+IKLLA+FVK QADQGWP + +
Sbjct: 61 PGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPTVST 104
>gi|157836467|pdb|2V07|A Chain A, Structure Of The Arabidopsis Thaliana Cytochrome C6a V52q
Variant
Length = 105
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/104 (78%), Positives = 93/104 (89%)
Query: 66 QTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRM 125
QT+DIQ+G +LF +ACI CHD GGN+IQPGATLF KDL+RNGVDTE+EIY TYFGKGRM
Sbjct: 1 QTLDIQRGATLFNRACIACHDTGGNIIQPGATLFTKDLERNGVDTEEEIYRQTYFGKGRM 60
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIES 169
PGFGEKCTPRGQCTFG RLQDE+IKLLA+FVK QADQGWP + +
Sbjct: 61 PGFGEKCTPRGQCTFGPRLQDEEIKLLAEFVKFQADQGWPTVST 104
>gi|293334331|ref|NP_001168633.1| uncharacterized protein LOC100382419 [Zea mays]
gi|223949699|gb|ACN28933.1| unknown [Zea mays]
gi|414887165|tpg|DAA63179.1| TPA: cytochrome c6 [Zea mays]
Length = 185
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 80/115 (69%), Positives = 96/115 (83%)
Query: 58 FHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHV 117
AA+S A + +G +LFR+ACIGCHD GGN++QPGATLFLKDL+RNGV TE+E+Y++
Sbjct: 71 LPAAISPAFAQPVSEGAALFRKACIGCHDMGGNILQPGATLFLKDLERNGVATEEELYNI 130
Query: 118 TYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESMED 172
TY+GKGRMPGFGEKCTPRGQCTFG RL ++DIK+LA FVKSQA GWPKIE D
Sbjct: 131 TYYGKGRMPGFGEKCTPRGQCTFGPRLSEDDIKILASFVKSQAQNGWPKIEGDGD 185
>gi|195635227|gb|ACG37082.1| cytochrome c6 [Zea mays]
Length = 185
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 80/115 (69%), Positives = 96/115 (83%)
Query: 58 FHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHV 117
AA+S A + +G +LFR+ACIGCHD GGN++QPGATLFLKDL+RNGV TE+E+Y++
Sbjct: 71 LPAAISPAFAQPVSEGAALFRKACIGCHDMGGNILQPGATLFLKDLERNGVATEEELYNI 130
Query: 118 TYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESMED 172
TY+GKGRMPGFGEKCTPRGQCTFG RL ++DIK+LA FVKSQA GWPKIE D
Sbjct: 131 TYYGKGRMPGFGEKCTPRGQCTFGPRLSEDDIKILALFVKSQAQNGWPKIEGDGD 185
>gi|125558842|gb|EAZ04378.1| hypothetical protein OsI_26520 [Oryza sativa Indica Group]
gi|125600761|gb|EAZ40337.1| hypothetical protein OsJ_24784 [Oryza sativa Japonica Group]
Length = 188
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 75/101 (74%), Positives = 91/101 (90%)
Query: 72 KGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEK 131
+G +LFR+ACIGCHD GGN++QPGATL++KDL+RNGV TEDE+Y++TY+GKGRMPGFGEK
Sbjct: 88 EGAALFRKACIGCHDMGGNILQPGATLYMKDLERNGVATEDELYNITYYGKGRMPGFGEK 147
Query: 132 CTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESMED 172
CTPRGQCTFG RL ++DIKLLA FVKSQA+ GWPKI+ D
Sbjct: 148 CTPRGQCTFGPRLVEDDIKLLAAFVKSQAENGWPKIDGDGD 188
>gi|449433475|ref|XP_004134523.1| PREDICTED: cytochrome c6, chloroplastic-like [Cucumis sativus]
Length = 170
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 90/103 (87%)
Query: 64 LAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKG 123
LA+T++I++G +LF Q+CIGCHDGGGN+IQPGATLF DL+RNG D E+EIY +TY GKG
Sbjct: 67 LAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKG 126
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
RMPGFGE C PRGQCTFG RLQ+E+I+LLA+FVK QAD+GWP
Sbjct: 127 RMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPN 169
>gi|357116604|ref|XP_003560070.1| PREDICTED: cytochrome c6, chloroplastic-like [Brachypodium
distachyon]
Length = 178
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 73/97 (75%), Positives = 89/97 (91%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G +LFR+ACIGCHD GGN++QPGATLF+KDL+RNGV TE+EIY++TY+GKGRMPG+GEKC
Sbjct: 79 GAALFRKACIGCHDTGGNILQPGATLFMKDLERNGVATEEEIYNITYYGKGRMPGYGEKC 138
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIES 169
T RGQCTFG RL ++DIK+LA FVKSQA+ GWPKIE+
Sbjct: 139 TSRGQCTFGPRLPEDDIKMLAAFVKSQAENGWPKIEA 175
>gi|449519916|ref|XP_004166980.1| PREDICTED: cytochrome c6, chloroplastic-like, partial [Cucumis
sativus]
Length = 146
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 90/103 (87%)
Query: 64 LAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKG 123
LA+T++I++G +LF Q+CIGCHDGGGN+IQPGATLF DL+RNG D E+EIY +TY GKG
Sbjct: 43 LAETIEIERGGALFNQSCIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYDGKG 102
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
RMPGFGE C PRGQCTFG RLQ+E+I+LLA+FVK QAD+GWP
Sbjct: 103 RMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPN 145
>gi|116782051|gb|ABK22349.1| unknown [Picea sitchensis]
Length = 192
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 74/107 (69%), Positives = 91/107 (85%)
Query: 62 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFG 121
VS AQ +D Q+G ++F++ACIGCH GGNV+QPGATL +DL+RNGV TE+ I+ +TY+G
Sbjct: 84 VSSAQMLDTQQGKAIFQKACIGCHYEGGNVLQPGATLTARDLERNGVATEENIFKITYYG 143
Query: 122 KGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIE 168
KGRMPGFGE CTP+GQCTFG RL DEDI LLA++VK QADQGWPK+E
Sbjct: 144 KGRMPGFGENCTPKGQCTFGPRLSDEDIHLLAEYVKLQADQGWPKLE 190
>gi|302823026|ref|XP_002993168.1| hypothetical protein SELMODRAFT_449033 [Selaginella moellendorffii]
gi|300139059|gb|EFJ05808.1| hypothetical protein SELMODRAFT_449033 [Selaginella moellendorffii]
Length = 295
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 79/100 (79%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D G F+++CIGCH GGN++Q GATL DLQRNG+ T ++I +TY+GKGRMPGF
Sbjct: 196 DASTGAETFQRSCIGCHARGGNILQAGATLGADDLQRNGISTVEDIVKITYYGKGRMPGF 255
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIE 168
GE C P+GQCTF +RL D+DI+ LA+FVKSQADQGWP+++
Sbjct: 256 GEGCKPQGQCTFASRLSDQDIQALAEFVKSQADQGWPRLD 295
>gi|302761432|ref|XP_002964138.1| hypothetical protein SELMODRAFT_438842 [Selaginella moellendorffii]
gi|300167867|gb|EFJ34471.1| hypothetical protein SELMODRAFT_438842 [Selaginella moellendorffii]
Length = 264
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 79/100 (79%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D G F+++CIGCH GGN++Q GATL DLQRNG+ T ++I +TY+GKGRMPGF
Sbjct: 165 DASTGAETFQRSCIGCHARGGNILQAGATLGADDLQRNGISTVEDIVKITYYGKGRMPGF 224
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIE 168
GE C P+GQCTF +RL D+DI+ LA+FVKSQADQGWP+++
Sbjct: 225 GEGCKPQGQCTFASRLSDQDIQALAEFVKSQADQGWPRLD 264
>gi|351725665|ref|NP_001238380.1| uncharacterized protein LOC100500456 [Glycine max]
gi|255630373|gb|ACU15543.1| unknown [Glycine max]
Length = 136
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 68/75 (90%)
Query: 62 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFG 121
VS AQTVDIQ+G +LFRQACIGCHD GGN+IQPGATLF KDLQRNGVDTE+ IY VTY+G
Sbjct: 62 VSSAQTVDIQRGTTLFRQACIGCHDAGGNIIQPGATLFAKDLQRNGVDTEEAIYGVTYYG 121
Query: 122 KGRMPGFGEKCTPRG 136
KGRMPGFG++C PRG
Sbjct: 122 KGRMPGFGKECMPRG 136
>gi|115472845|ref|NP_001060021.1| Os07g0567400 [Oryza sativa Japonica Group]
gi|34393286|dbj|BAC83200.1| cytochrome C6, chloroplast precursor-like protein [Oryza sativa
Japonica Group]
gi|113611557|dbj|BAF21935.1| Os07g0567400 [Oryza sativa Japonica Group]
Length = 73
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 65/73 (89%)
Query: 100 LKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQ 159
+KDL+RNGV TEDE+Y++TY+GKGRMPGFGEKCTPRGQCTFG RL ++DIKLLA FVKSQ
Sbjct: 1 MKDLERNGVATEDELYNITYYGKGRMPGFGEKCTPRGQCTFGPRLVEDDIKLLAAFVKSQ 60
Query: 160 ADQGWPKIESMED 172
A+ GWPKI+ D
Sbjct: 61 AENGWPKIDGDGD 73
>gi|255084017|ref|XP_002508583.1| cytochrome c553, chloroplast precursor [Micromonas sp. RCC299]
gi|226523860|gb|ACO69841.1| cytochrome c553, chloroplast precursor [Micromonas sp. RCC299]
Length = 174
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 64/89 (71%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
LF + C GCH GGNV+Q GATLF DL RNGV+ D +Y + Y GKG+MPG+GE C P+
Sbjct: 85 LFTRTCAGCHAAGGNVVQAGATLFPADLTRNGVNDADAVYDIIYGGKGKMPGYGEGCAPK 144
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GQCTFGARL DED++ LA +V ++ W
Sbjct: 145 GQCTFGARLSDEDVRGLAGYVLERSAAEW 173
>gi|303289377|ref|XP_003063976.1| cytochrome c553, chloroplast precursor [Micromonas pusilla
CCMP1545]
gi|226454292|gb|EEH51598.1| cytochrome c553, chloroplast precursor [Micromonas pusilla
CCMP1545]
Length = 186
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 65/89 (73%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
+F + C GCH GGNV+Q GATLF DLQRNGV D IY V G+ +MPG+GE+C P+
Sbjct: 97 VFNKTCAGCHAAGGNVVQAGATLFPADLQRNGVSDVDTIYDVISKGRNKMPGYGEECAPK 156
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GQCTFG RL DED++ L+ +V +Q+ +GW
Sbjct: 157 GQCTFGPRLSDEDVRELSTYVLAQSKEGW 185
>gi|159467879|ref|XP_001692119.1| chloroplast cytochrome c [Chlamydomonas reinhardtii]
gi|158278846|gb|EDP04609.1| chloroplast cytochrome c [Chlamydomonas reinhardtii]
Length = 161
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
LF C GCH GGN++ GATLF +DLQ+NGVD+ + +Y + Y GKG+MPGFG++C P+
Sbjct: 71 LFANKCAGCHMNGGNILAVGATLFSEDLQKNGVDSPEALYKIIYSGKGKMPGFGKECAPK 130
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G CTFGARL DE++ LA +V +A GW
Sbjct: 131 GACTFGARLSDEEVTSLASYVAERAAAGW 159
>gi|302851881|ref|XP_002957463.1| hypothetical protein VOLCADRAFT_121636 [Volvox carteri f.
nagariensis]
gi|300257267|gb|EFJ41518.1| hypothetical protein VOLCADRAFT_121636 [Volvox carteri f.
nagariensis]
Length = 162
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 64/89 (71%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
LF C GCH G NV+ GATLF DL+RNGVD+ + +Y + Y GKG+MPGFG++C P+
Sbjct: 72 LFTNKCAGCHMNGANVLAVGATLFPDDLRRNGVDSSEALYKIIYSGKGKMPGFGKECAPK 131
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G CTFG RL DE++ LA +V+ +A +GW
Sbjct: 132 GACTFGPRLSDEEVAALATYVQERAAEGW 160
>gi|308813133|ref|XP_003083873.1| unnamed protein product [Ostreococcus tauri]
gi|116055755|emb|CAL57840.1| unnamed protein product [Ostreococcus tauri]
Length = 163
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 74/126 (58%)
Query: 39 ELQKYDTYNVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL 98
E + ++ + ++ F S A+ D V+ + C+GCH GGNV+ ATL
Sbjct: 37 EQRPFEASAAPFVALAASAFLIGASPARAFDGDAAVTFSSKGCVGCHAAGGNVVNGSATL 96
Query: 99 FLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKS 158
F +DL+RNG+ T+D++ V GKG+MPG+GE C P+G CTFGARL E+I LA +V
Sbjct: 97 FTRDLERNGLTTKDDVARVIELGKGKMPGYGEACAPKGACTFGARLNAEEIDALATYVLE 156
Query: 159 QADQGW 164
QA W
Sbjct: 157 QAANDW 162
>gi|117649962|gb|ABK54022.1| plastid cytochrome c6A [Closterium peracerosum-strigosum-littorale
complex]
Length = 222
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 65/91 (71%)
Query: 75 SLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTP 134
++F + C GCH GGGN+++PGA L L DL+RNG+ + ++I VT GRMPG+GE C P
Sbjct: 132 AVFARTCAGCHAGGGNLLKPGAGLSLADLERNGLSSVEDIARVTALSVGRMPGYGEDCKP 191
Query: 135 RGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
RGQCTFG RL + I+ LA++ +QA GWP
Sbjct: 192 RGQCTFGPRLSADVIRQLAEYTLAQAQAGWP 222
>gi|307106180|gb|EFN54427.1| hypothetical protein CHLNCDRAFT_17921, partial [Chlorella
variabilis]
Length = 89
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 61/89 (68%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
+F ++C GCH GGGN+I+ ATL L DL++ GV +Y V Y G+G MPGFG C P+
Sbjct: 1 VFEKSCAGCHSGGGNIIRRDATLQLGDLEKYGVADTQALYTVIYGGRGSMPGFGLDCAPK 60
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G CTFG RL DE+IK LA+FV S A GW
Sbjct: 61 GACTFGPRLADEEIKALAEFVLSSAQSGW 89
>gi|384249025|gb|EIE22508.1| hypothetical protein COCSUDRAFT_83465, partial [Coccomyxa
subellipsoidea C-169]
Length = 101
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 62/95 (65%), Gaps = 7/95 (7%)
Query: 77 FRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR- 135
F + GCH GGGNV+Q GATL DL+RN V T + IY + Y GKG+MPG+G CTP+
Sbjct: 6 FLRLSPGCHVGGGNVVQAGATLREGDLKRNSVATVESIYDLVYSGKGKMPGYGTGCTPKA 65
Query: 136 ------GQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+CTFG RL DE+I+ L+Q+V QA W
Sbjct: 66 SSPALQGKCTFGPRLSDEEIQRLSQYVVDQAAADW 100
>gi|412986077|emb|CCO17277.1| cytochrome c553, chloroplast precursor [Bathycoccus prasinos]
Length = 226
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 79/134 (58%), Gaps = 15/134 (11%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQK---------GVSLFRQA--CIGCHDGGGNVIQPGA 96
V C+ + + F + + A T+ +++ G +LF+ A CIGCH GGN+++ G
Sbjct: 90 VACVLLPMHFSPPSPATASTMTMEEDSNISSMNNGKALFKGAGGCIGCHAAGGNIVEAGK 149
Query: 97 TLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFV 156
TL L+DL++NG + ++++ V GK +MPG+GE C +G+CTF RL +++I L+ FV
Sbjct: 150 TLSLQDLRKNGANGKEDVAEVISLGKNKMPGYGENCVGKGKCTFAKRLTEKEIDDLSAFV 209
Query: 157 ----KSQADQGWPK 166
+++ W K
Sbjct: 210 WNVANDESESSWAK 223
>gi|168018912|ref|XP_001761989.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686706|gb|EDQ73093.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 49/62 (79%)
Query: 105 RNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
RNG+ + I+ +TY GKGRMPG+GEKC PRGQCTFG RL D DI+ LA+FV+ QADQGW
Sbjct: 1 RNGMANVENIFQITYSGKGRMPGYGEKCAPRGQCTFGPRLSDSDIRALAEFVRLQADQGW 60
Query: 165 PK 166
K
Sbjct: 61 TK 62
>gi|435856191|ref|YP_007316989.1| cytochrome c553 (chloroplast) [Nannochloropsis gaditana]
gi|429126115|gb|AFZ64286.1| cytochrome c553 (chloroplast) [Nannochloropsis gaditana]
Length = 121
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 39 ELQKYDTYNVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL 98
E+ K T +L L + L F + VS+A DI+ G +F C CH GG NVI P TL
Sbjct: 9 EIMKSFTLRILSLSLCLPFLMSTVSVA--ADIENGERIFSANCSACHAGGNNVIIPEKTL 66
Query: 99 FLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKS 158
L+ NG+++ D+I + GK MP FG RL D DI+ +A +V S
Sbjct: 67 KKDALEANGMNSVDKITYQVTNGKNAMPA------------FGGRLDDSDIEDVANYVLS 114
Query: 159 QADQGW 164
Q+++GW
Sbjct: 115 QSEKGW 120
>gi|443328444|ref|ZP_21057041.1| cytochrome c, mono- and diheme variants family [Xenococcus sp. PCC
7305]
gi|442791898|gb|ELS01388.1| cytochrome c, mono- and diheme variants family [Xenococcus sp. PCC
7305]
Length = 107
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 57/112 (50%), Gaps = 20/112 (17%)
Query: 53 VSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTED 112
+LGF + A++ G + F C CH GGGNVI P ATL L DLQ+NG D+ +
Sbjct: 16 ATLGFANPALA--------DGAATFSANCAACHSGGGNVINPTATLSLADLQKNGKDSLE 67
Query: 113 EIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
I +GK MP FG RL D I+ +A +V SQA+ GW
Sbjct: 68 AIVTQVTYGKAPMP------------AFGGRLTDAQIEEVAAYVLSQAEAGW 107
>gi|119484682|ref|ZP_01619164.1| cytochrome c6 [Lyngbya sp. PCC 8106]
gi|119457500|gb|EAW38624.1| cytochrome c6 [Lyngbya sp. PCC 8106]
Length = 114
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 15/127 (11%)
Query: 38 LELQKYDTYNVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGAT 97
+++ K T +L + L F +S Q + Q G +F Q C GCH GGGN+++ G T
Sbjct: 1 MKIHKISTSFILIFTLGLLTF---LSPVQAANSQNGAKVFNQQCAGCHAGGGNIVRWGKT 57
Query: 98 LFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVK 157
L L RNG DT + I ++ GKG MP + E+ TP+ +I+ ++++V
Sbjct: 58 LKKNALNRNGYDTIEAISYLVTQGKGNMPAYKERLTPK------------EIQDVSEYVM 105
Query: 158 SQADQGW 164
QA++ W
Sbjct: 106 KQAEKNW 112
>gi|56751577|ref|YP_172278.1| cytochrome C6-2 [Synechococcus elongatus PCC 6301]
gi|81301351|ref|YP_401559.1| cytochrome C6-2 [Synechococcus elongatus PCC 7942]
gi|56686536|dbj|BAD79758.1| putative cytochrome C6-2 [Synechococcus elongatus PCC 6301]
gi|81170232|gb|ABB58572.1| putative cytochrome C6-2 [Synechococcus elongatus PCC 7942]
Length = 115
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 12/94 (12%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G +LF C+GCH GGGN+I+ G TL LK L++NG DT + I + GK M + ++
Sbjct: 33 GAALFEAQCVGCHIGGGNIIRRGKTLQLKALKKNGYDTAEAIATIVSQGKNNMSAYSDRL 92
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
+P E+I +++ +V QA+ GWP+
Sbjct: 93 SP------------EEIAIVSAYVLEQANAGWPR 114
>gi|269101077|ref|YP_003289225.1| cytochrome c6 [Ectocarpus siliculosus]
gi|266631585|emb|CAV31256.1| cytochrome c6 [Ectocarpus siliculosus]
gi|270118715|emb|CAT18795.1| cytochrome c6 [Ectocarpus siliculosus]
Length = 110
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 55 LGFFHAAVSL------AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGV 108
LGFF + ++L A+ VDI G S+F C CH GG NVI P TL + L N +
Sbjct: 6 LGFFISCLALISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKEALGTNSM 65
Query: 109 DTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
++ + I + GK MP FG RL + DI+ +A FV S+ADQGW
Sbjct: 66 NSVNAITYQVTNGKNAMP------------AFGGRLSEPDIEDVANFVLSKADQGW 109
>gi|145355221|ref|XP_001421864.1| distinct from photosynthetic electron transfer catalyst, CYC6
[Ostreococcus lucimarinus CCE9901]
gi|144582103|gb|ABP00158.1| distinct from photosynthetic electron transfer catalyst, CYC6
[Ostreococcus lucimarinus CCE9901]
Length = 64
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 101 KDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQA 160
+DL+RNGV T+++I ++ GKG+MPG+GE C P+G CTFGARL E+I LA +V +A
Sbjct: 1 RDLERNGVATKEDISNLIERGKGKMPGYGESCAPKGACTFGARLDAEEIDALATYVLDRA 60
Query: 161 DQGW 164
W
Sbjct: 61 AVDW 64
>gi|428227188|ref|YP_007111285.1| cytochrome c class I [Geitlerinema sp. PCC 7407]
gi|427987089|gb|AFY68233.1| cytochrome c class I [Geitlerinema sp. PCC 7407]
Length = 120
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 18/123 (14%)
Query: 48 VLCLPVSLGFFHAAVSLAQTV------DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLK 101
+ + V LG A +L +V D+ G +F C+GCH GGN+++ G TL L+
Sbjct: 9 IWSVKVWLGILCALWALTWSVPGAIAADLDLGAKVFEVHCVGCHLKGGNIVRRGKTLQLR 68
Query: 102 DLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQAD 161
LQRNGVDT++ I + GK M +G++ TP E+I+ ++ +V +A
Sbjct: 69 ALQRNGVDTQEAIADLVTHGKNNMSAYGDRLTP------------EEIQAVSAYVLDRAQ 116
Query: 162 QGW 164
GW
Sbjct: 117 TGW 119
>gi|37521549|ref|NP_924926.1| cytochrome c6 [Gloeobacter violaceus PCC 7421]
gi|35212547|dbj|BAC89921.1| cytochrome c6 [Gloeobacter violaceus PCC 7421]
Length = 114
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 51 LPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDT 110
L ++G AA SL D+ +G +F+ C CH GG N + P TL ++DL++ +DT
Sbjct: 9 LLSAVGIVFAASSLQAAADLAQGEKVFKANCAMCHAGGRNTVNPAKTLKIEDLKKYKMDT 68
Query: 111 EDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
I Y GKG MP FG+ +L+ + I + +V QA++GW K
Sbjct: 69 AAAISAQLYNGKGAMPAFGKN----------GKLKQDQIDSVTAYVLDQANKGWKK 114
>gi|428771164|ref|YP_007162954.1| Cytochrome c6 [Cyanobacterium aponinum PCC 10605]
gi|428685443|gb|AFZ54910.1| Cytochrome c6 [Cyanobacterium aponinum PCC 10605]
Length = 111
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 14/112 (12%)
Query: 53 VSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTED 112
++ FF A +LA D+ KG ++F C CH GG NV+ P TL +DL++ G+ +
Sbjct: 13 TAVNFFFATPALAG--DVTKGAAIFSANCASCHMGGKNVVNPAKTLQKEDLEKYGMYDIE 70
Query: 113 EIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+I GK MP +F +RL DEDI +A +V +QAD GW
Sbjct: 71 QIKTQVMNGKAAMP------------SFLSRLTDEDIDNVASYVLAQADNGW 110
>gi|126660190|ref|ZP_01731308.1| Cytochrome c, class I [Cyanothece sp. CCY0110]
gi|126618555|gb|EAZ89306.1| Cytochrome c, class I [Cyanothece sp. CCY0110]
Length = 115
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
++ G +F C GCH G N+I+ G L ++ L+RN VDT D I H+ +GK M +
Sbjct: 29 EVTDGSKIFTVHCAGCHPNGNNIIRRGKNLKMRALKRNKVDTLDSIIHLVTYGKNNMSAY 88
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
EK T Q+E IK+++Q+V QA W
Sbjct: 89 EEKLT-----------QNE-IKVVSQYVLEQAKNNW 112
>gi|172036022|ref|YP_001802523.1| cytochrome c family protein [Cyanothece sp. ATCC 51142]
gi|354552829|ref|ZP_08972136.1| cytochrome c class I [Cyanothece sp. ATCC 51472]
gi|171697476|gb|ACB50457.1| cytochrome c family protein [Cyanothece sp. ATCC 51142]
gi|353554659|gb|EHC24048.1| cytochrome c class I [Cyanothece sp. ATCC 51472]
Length = 115
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G +F C GCH G N+I+ G L +K L+RN VDT D + ++ +GK M + E+
Sbjct: 33 GAKIFTVHCAGCHPNGNNIIRRGKNLKMKALKRNKVDTLDAVINIVTYGKNNMSAYEERL 92
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
T QDE IK+++Q+V QA+ W
Sbjct: 93 T-----------QDE-IKMVSQYVLEQANNNW 112
>gi|117923|sp|P00110.1|CYC6_BUMFI RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
Length = 86
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
DI+ G +F C CH GG NVI P TL L+ NG++ I + GK MP
Sbjct: 1 ADIENGERIFTANCAACHAGGNNVIMPEKTLKKDALEANGMNAVSAITYQVTNGKNAMP- 59
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL D DI+ +A +V SQ++QGW
Sbjct: 60 -----------AFGGRLSDSDIEDVANYVLSQSEQGW 85
>gi|148242697|ref|YP_001227854.1| cytochrome C6 [Synechococcus sp. RCC307]
gi|147851007|emb|CAK28501.1| Cytochrome C6 [Synechococcus sp. RCC307]
Length = 106
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 15/110 (13%)
Query: 55 LGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEI 114
LG + A + D G +LF C+GCH GGN+I+ G TL LK L+RNG++ EI
Sbjct: 11 LGLWMAPAPVHAAAD---GAALFEAHCVGCHLNGGNIIRRGKTLKLKALERNGIEGPLEI 67
Query: 115 YHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ G+G+M +GE L +E +A+F+ QA +GW
Sbjct: 68 AMIATEGRGQMSAYGEV------------LGEEGADAVAEFIWQQAQEGW 105
>gi|452821497|gb|EME28527.1| [pt] acetyl-CoA carboxylase carboxyltransferase subunit beta
[Galdieria sulphuraria]
Length = 549
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 64 LAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKG 123
+A D+ G +F C CH GG NVI P TL + L+ N V+T + I + GK
Sbjct: 459 VAFAADLSNGEQIFSANCAACHTGGNNVIMPEKTLKKESLEANKVNTVEAITYQVTNGKN 518
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MP FG RL D DI+ +A ++ +QA++GW
Sbjct: 519 AMPA------------FGGRLSDTDIEDVANYILTQAEKGW 547
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 67 TVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQ 104
T ++KG LF C CH GGG P L +K LQ
Sbjct: 349 TEQVKKGKRLFNSNCAQCHSGGGTKTNPNIGLDIKSLQ 386
>gi|148239088|ref|YP_001224475.1| cytochrome C6 [Synechococcus sp. WH 7803]
gi|147847627|emb|CAK23178.1| Cytochrome C6 [Synechococcus sp. WH 7803]
Length = 120
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 17/123 (13%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN- 106
+LC+ +SL A +L+ + D + G LF C CH GGGNVI TL DLQ +
Sbjct: 11 LLCMGLSLIAAWPASALS-SPDPEHGAQLFSANCAACHMGGGNVISASRTLSQTDLQAHL 69
Query: 107 ---GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQG 163
G+D + I H GK MP + K L D+DI +A +V+SQA+QG
Sbjct: 70 ESYGMDPLEAIEHQIENGKNAMPAYEGK------------LSDQDIADVAAYVESQAEQG 117
Query: 164 WPK 166
W +
Sbjct: 118 WSR 120
>gi|376003456|ref|ZP_09781266.1| cytochrome c553 [Arthrospira sp. PCC 8005]
gi|375328113|emb|CCE17019.1| cytochrome c553 [Arthrospira sp. PCC 8005]
Length = 113
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 48 VLCLPVSLGF-FHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN 106
+L L VSL + ++A ++I+KG +F C+GCH GGGN+I+ G L + LQRN
Sbjct: 7 ILLLSVSLLWGCWTPKAIADNLNIEKGGEIFSVHCVGCHAGGGNIIRRGKNLKQRALQRN 66
Query: 107 GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G D+ + I + GK M + + RL +I+ +A +V QA++ W
Sbjct: 67 GYDSIEAIAEIVANGKSNMSAYSD------------RLSVSEIQQVAAYVLDQAEKNW 112
>gi|209526792|ref|ZP_03275313.1| cytochrome c class I [Arthrospira maxima CS-328]
gi|423066830|ref|ZP_17055620.1| putative cytochrome c6 [Arthrospira platensis C1]
gi|209492753|gb|EDZ93087.1| cytochrome c class I [Arthrospira maxima CS-328]
gi|406711595|gb|EKD06795.1| putative cytochrome c6 [Arthrospira platensis C1]
Length = 115
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 48 VLCLPVSLGF-FHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN 106
+L L VSL + ++A ++I+KG +F C+GCH GGGN+I+ G L + LQRN
Sbjct: 9 ILLLSVSLLWGCWTPKAIADNLNIEKGGEIFSVHCVGCHAGGGNIIRRGKNLKQRALQRN 68
Query: 107 GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G D+ + I + GK M + + RL +I+ +A +V QA++ W
Sbjct: 69 GYDSIEAIAEIVANGKSNMSAYSD------------RLSVSEIQQVAAYVLDQAEKNW 114
>gi|215400794|ref|YP_002327555.1| cytochrome c553 [Vaucheria litorea]
gi|194441244|gb|ACF70972.1| cytochrome c553 [Vaucheria litorea]
Length = 113
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNG 107
++ + +S ++ S DI G ++F C+GCH GG NVI TL +K L+ N
Sbjct: 5 IISILISTFLIQSSSSPLLAADINNGQTIFSANCVGCHAGGKNVIDRSKTLGIKALKEND 64
Query: 108 VDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
+ + ++I GK MP FG RL +EDI+ +A FV SQA + W K
Sbjct: 65 MYSSEKIITQVTNGKSSMPA------------FGTRLTEEDIEDVASFVLSQATE-WDK 110
>gi|428773033|ref|YP_007164821.1| cytochrome c class I [Cyanobacterium stanieri PCC 7202]
gi|428687312|gb|AFZ47172.1| cytochrome c class I [Cyanobacterium stanieri PCC 7202]
Length = 121
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 18/116 (15%)
Query: 55 LGFFHAAVSLAQT--VDIQKGVS----LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGV 108
L F ++ ++AQ +I + ++ LF C GCH GGN+I+ L LK LQRNG
Sbjct: 17 LNFVYSPRAIAQINLTEINRNITDPSKLFELNCAGCHVNGGNIIRRSKNLKLKTLQRNGY 76
Query: 109 DTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
DT + I ++ GK M +G+ RL + I LA++V ++A+ W
Sbjct: 77 DTVESISNIITHGKNNMSAYGD------------RLSSQQINDLAKYVLNKAENNW 120
>gi|357404302|ref|YP_004916226.1| cytochrome C6 [Methylomicrobium alcaliphilum 20Z]
gi|351716967|emb|CCE22632.1| cytochrome c6 [Methylomicrobium alcaliphilum 20Z]
Length = 102
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 18/104 (17%)
Query: 61 AVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYF 120
AV +AQ D+ F + C+ CH GG NV+ P TL + L++NGV++ D I +
Sbjct: 17 AVGVAQANDV------FNKNCVACHAGGKNVMNPDKTLSSESLEKNGVNSLDAIKKLVSE 70
Query: 121 GKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GK MPG F + L E+I+ ++ +V QA +GW
Sbjct: 71 GKSPMPG------------FASTLSKEEIESVSAYVLEQAKKGW 102
>gi|220908868|ref|YP_002484179.1| cytochrome C class I [Cyanothece sp. PCC 7425]
gi|219865479|gb|ACL45818.1| cytochrome c class I [Cyanothece sp. PCC 7425]
Length = 104
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 72 KGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEK 131
+G LF C GCH GGN+++ G TL L LQRNG DT + I + GKG M + E+
Sbjct: 23 EGAQLFDLHCAGCHLNGGNIVRRGKTLKLPALQRNGYDTVEAITAIVSNGKGNMSAYKER 82
Query: 132 CTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
TP + I ++A +V QA Q W
Sbjct: 83 LTP------------DQIAIVADYVLQQATQNW 103
>gi|376403670|ref|YP_005090031.1| petJ gene product (chloroplast) [Fucus vesiculosus]
gi|269991233|emb|CAX12411.1| cytochrome c553 [Fucus vesiculosus]
Length = 110
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Query: 49 LCLP-VSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNG 107
L +P ++L F+ +V Q VDI G ++F C CH GG NVI P TL L N
Sbjct: 8 LFIPYLTLISFYTSV---QAVDINHGENVFTANCSACHAGGNNVIMPEKTLKKDALSTNQ 64
Query: 108 VDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+D+ I + GK MP FG RL D+DI+ +A FV SQ+++ W
Sbjct: 65 MDSISAITYQVTNGKNAMPA------------FGGRLSDDDIEDVASFVLSQSEKDW 109
>gi|409992359|ref|ZP_11275554.1| cytochrome c6 [Arthrospira platensis str. Paraca]
gi|291566941|dbj|BAI89213.1| cytochrome c6 [Arthrospira platensis NIES-39]
gi|409936772|gb|EKN78241.1| cytochrome c6 [Arthrospira platensis str. Paraca]
Length = 115
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 62 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFG 121
+++A ++ +G +F C+GCH GGGN+I+ G L + LQRNG D+ + I + G
Sbjct: 24 MAIADNLNFDQGAEIFSVHCVGCHAGGGNIIRRGKNLKQRALQRNGYDSIEAIAEIVSNG 83
Query: 122 KGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
K M + + RL +IK +A +V QA++ W
Sbjct: 84 KSNMSAYSD------------RLSVSEIKQVAAYVLDQAEKNW 114
>gi|189095396|ref|YP_001936409.1| cytochrome c553 [Heterosigma akashiwo]
gi|157694739|gb|ABV66015.1| cytochrome c553 [Heterosigma akashiwo]
gi|157777970|gb|ABV70156.1| cytochrome c553 [Heterosigma akashiwo]
Length = 112
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 67 TVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMP 126
DI+ G +F C CH GG NVI P TL + L++ G+ + D I + GK MP
Sbjct: 26 AADIENGEKIFTANCSACHAGGNNVIMPEKTLKKEALEQYGMKSVDAITYQVTNGKNAMP 85
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL D DI+ +A +V SQ ++GW
Sbjct: 86 ------------AFGGRLSDSDIEDVANYVLSQTEKGW 111
>gi|90994391|ref|YP_536881.1| cytochrome c553 [Pyropia yezoensis]
gi|25008338|sp|Q8WKJ8.1|CYC6_PORYE RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|18146964|dbj|BAB82501.1| cytochrome c6 [Pyropia yezoensis]
gi|90818955|dbj|BAE92324.1| cytochrome c553 [Pyropia yezoensis]
Length = 110
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 64 LAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKG 123
+A D+ G +F C CH GG N I P TL L+ N ++T D I + GK
Sbjct: 22 IAFAADLDNGEKVFSANCAACHAGGNNAIMPDKTLKKDVLEANSMNTIDAITYQVQNGKN 81
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MP FG RL DEDI+ A +V SQ+++GW
Sbjct: 82 AMPA------------FGGRLVDEDIEDAANYVLSQSEKGW 110
>gi|88809570|ref|ZP_01125077.1| possible cytochrome c6 [Synechococcus sp. WH 7805]
gi|88786320|gb|EAR17480.1| possible cytochrome c6 [Synechococcus sp. WH 7805]
Length = 120
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 17/127 (13%)
Query: 45 TYNVLCLPVSLGFFHA-AVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDL 103
++ L L + LG A S + D + G LF C CH GGGNVI TL DL
Sbjct: 6 SFLALLLSIGLGLMSAMPASALSSPDPEHGAQLFSANCAACHMGGGNVISASRTLSQTDL 65
Query: 104 QRN----GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQ 159
Q + G+D + I H GK MP + K L D+DI +A +V+ Q
Sbjct: 66 QAHLESYGMDPLEAIEHQIENGKNAMPAYEGK------------LSDQDIADVAAYVERQ 113
Query: 160 ADQGWPK 166
A+ GW +
Sbjct: 114 AEHGWSR 120
>gi|122703820|gb|ABM66380.1| cytochrome c6 [Pyropia tenera]
Length = 110
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 64 LAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKG 123
+A D+ G +F C CH GG N I P TL L+ N ++T D I + GK
Sbjct: 22 IAFAADLDNGEKVFSANCAACHAGGNNAIMPDKTLKKDVLEANSMNTIDAITYQVQNGKN 81
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MP FG RL DEDI+ A +V SQ+++GW
Sbjct: 82 AMPA------------FGGRLVDEDIEDAANYVLSQSEKGW 110
>gi|117929|sp|P00108.1|CYC6_PETFA RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
gi|350634|prf||0710253A cytochrome c553
Length = 85
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
VDI G S+F C CH GG NVI P TL L+ N ++ I + GK MP
Sbjct: 1 VDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALEENEMNNIKSITYQVTNGKNAMPA 60
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL + DI+ +A FV SQ+ +GW
Sbjct: 61 ------------FGGRLSETDIEDVANFVISQSQKGW 85
>gi|34494840|dbj|BAC85100.1| cytochrome c6 [Hizikia fusiformis]
Length = 110
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 54/122 (44%), Gaps = 24/122 (19%)
Query: 43 YDTYNVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKD 102
Y T + C PV Q DI G ++F C CH GG NVI P TL
Sbjct: 12 YITAIIFCTPV------------QAADINHGENVFTANCSACHAGGNNVIMPEKTLQKDA 59
Query: 103 LQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQ 162
L N +++ I + GK MP FG RL D+DI+ +A FV SQ+++
Sbjct: 60 LSTNQMNSVGAITYQVTNGKNAMPA------------FGGRLSDDDIEDVASFVLSQSEK 107
Query: 163 GW 164
W
Sbjct: 108 SW 109
>gi|427736979|ref|YP_007056523.1| cytochrome c, mono- and diheme variants family [Rivularia sp. PCC
7116]
gi|427372020|gb|AFY55976.1| cytochrome c, mono- and diheme variants family [Rivularia sp. PCC
7116]
Length = 175
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 71 QKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGE 130
++G LF+Q C CH GGGN++ TL + L++ + +++ I + GK MP FG+
Sbjct: 94 EEGAQLFKQNCAACHAGGGNLVAANKTLKKEALEKYDMYSKEAIVYQVTNGKNAMPAFGK 153
Query: 131 KCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
RL E I+ LA +V +QAD+GW
Sbjct: 154 ------------RLSSEQIESLAGYVLAQADKGW 175
>gi|11465452|ref|NP_045157.1| cytochrome c553 [Cyanidium caldarium]
gi|6466355|gb|AAF12937.1|AF022186_59 unknown [Cyanidium caldarium]
Length = 114
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNG 107
++ + V+L + + +++ G +F C CH GG NVI P TL + L+ N
Sbjct: 11 IIVVAVTLCALFTNEHVVYSANLEHGEQIFSANCAACHAGGNNVIMPEKTLKAEALEANN 70
Query: 108 VDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ I + GK MP F +RL D DI+ +A +V S+AD+GW
Sbjct: 71 IKNISAIANQVKNGKNAMPSF-------------SRLSDSDIEDVANYVLSKADKGW 114
>gi|117931|sp|P00111.1|CYC6_PORTE RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
gi|7430459|pir||JC5849 cytochrome c6 - red alga (Porphyra yezoensis)
gi|14278691|pdb|1GDV|A Chain A, Crystal Structure Of Cytochrome C6 From Red Alga Porphyra
Yezoensis At 1.57 A Resolution
Length = 85
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
D+ G +F C CH GG N I P TL L+ N ++T D I + GK MP
Sbjct: 1 ADLDNGEKVFSANCAACHAGGNNAIMPDKTLKKDVLEANSMNTIDAITYQVQNGKNAMP- 59
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL DEDI+ A +V SQ+++GW
Sbjct: 60 -----------AFGGRLVDEDIEDAANYVLSQSEKGW 85
>gi|78184474|ref|YP_376909.1| cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. CC9902]
gi|78168768|gb|ABB25865.1| cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. CC9902]
Length = 112
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 63 SLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGK 122
L Q +G +LF+Q C CH GGN+I+ G TL LK L+R G+ + D I + G
Sbjct: 20 GLGQAAASSEGAALFQQHCAACHINGGNIIRRGKTLKLKALERQGIASMDAIAQIAREGV 79
Query: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+M G+G+ P G +L+A+++ QA W
Sbjct: 80 GQMSGYGDVLGPGGD------------QLVAEWIWEQAQNAW 109
>gi|158335898|ref|YP_001517072.1| cytochrome c6 PetJ [Acaryochloris marina MBIC11017]
gi|158306139|gb|ABW27756.1| cytochrome c6 PetJ [Acaryochloris marina MBIC11017]
Length = 121
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G LF C GCH GGN+I+ TL LK LQR+G DT + ++ G+ MPGF ++
Sbjct: 41 GAVLFETYCAGCHPKGGNIIRRRKTLKLKSLQRDGYDTLAPVINLITQGQNNMPGFADQ- 99
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
L D I+ +AQFV QA W
Sbjct: 100 -----------LNDTQIETVAQFVLEQASNNW 120
>gi|14285419|sp|Q9TLW1.2|CYC6_CYACA RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
Length = 109
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNG 107
++ + V+L + + +++ G +F C CH GG NVI P TL + L+ N
Sbjct: 6 IIVVAVTLCALFTNEHVVYSANLEHGEQIFSANCAACHAGGNNVIMPEKTLKAEALEANN 65
Query: 108 VDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ I + GK MP F +RL D DI+ +A +V S+AD+GW
Sbjct: 66 IKNISAIANQVKNGKNAMPSF-------------SRLSDSDIEDVANYVLSKADKGW 109
>gi|260434328|ref|ZP_05788298.1| cytochrome c6 [Synechococcus sp. WH 8109]
gi|260412202|gb|EEX05498.1| cytochrome c6 [Synechococcus sp. WH 8109]
Length = 118
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 51 LPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDT 110
L + L A SLA D G LF Q C GCH GGN+I+ G L LK L+R + T
Sbjct: 14 LVLLLSLAPAGASLATGPDASPGALLFEQHCAGCHINGGNIIRRGKNLKLKTLEREQIAT 73
Query: 111 EDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
D I + G+G+M G+ E L + +L+A++V QA W
Sbjct: 74 VDAISAIAREGRGQMSGYAEA------------LGSDGDQLVAEWVLMQAQNAW 115
>gi|452821068|gb|EME28103.1| peroxisomal membrane MPV17/PMP22-like protein isoform 1 [Galdieria
sulphuraria]
Length = 362
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 75 SLFRQACIGCHDGGGNVI--QPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
+LF Q C CH+ GGN+I TLF K L++NG ++ I +T GKG MPG+ K
Sbjct: 282 TLFEQNCAACHNNGGNIIFYARNKTLFPKALEKNGYLNKESISDLTKQGKGAMPGYANK- 340
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
L DE+I LL+ ++ +A + W
Sbjct: 341 -----------LNDEEISLLSDYILQRAAENW 361
>gi|124023519|ref|YP_001017826.1| cytochrome C, class IC:cytochrome C, class I [Prochlorococcus
marinus str. MIT 9303]
gi|123963805|gb|ABM78561.1| Cytochrome c, class IC:Cytochrome c, class I [Prochlorococcus
marinus str. MIT 9303]
Length = 125
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 67 TVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMP 126
+DI G SLF+Q C GCH GGN+I+ TL LK L+RNG+D I V G G+M
Sbjct: 37 ALDIDSGGSLFKQHCSGCHVNGGNIIRRNKTLRLKALERNGLDNPQAIARVAREGIGQMS 96
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
G+ + L D +L+A ++ +QA W +
Sbjct: 97 GYEDV------------LGDSGDQLVAAWIWAQAQNAWTQ 124
>gi|427735849|ref|YP_007055393.1| cytochrome c, mono- and diheme variants family [Rivularia sp. PCC
7116]
gi|427370890|gb|AFY54846.1| cytochrome c, mono- and diheme variants family [Rivularia sp. PCC
7116]
Length = 112
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 15/103 (14%)
Query: 64 LAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKG 123
LA TVD G +F C GCH GGN+I+ G L +K L++ +D+ + IY++ +GK
Sbjct: 24 LADTVD---GAKIFSANCAGCHINGGNIIRRGKNLKIKALKKYKMDSVEAIYNIVTYGKN 80
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
M + + RL + +I+ ++ +V QA+ W K
Sbjct: 81 NMSAYKD------------RLTESEIQAVSIYVLKQAENNWRK 111
>gi|416388385|ref|ZP_11685166.1| Cytochrome C553 (soluble cytochrome f) [Crocosphaera watsonii WH
0003]
gi|357264440|gb|EHJ13333.1| Cytochrome C553 (soluble cytochrome f) [Crocosphaera watsonii WH
0003]
Length = 94
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
Q DI G +F C+GCH G N+I+ G L L+ L+RN VD+ D I ++ +GK
Sbjct: 5 VQAEDINDGAKIFSIHCVGCHPQGKNIIRRGKNLKLRALKRNKVDSLDAIINLVTYGKNN 64
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
M + +K T E I+ ++++V QA W
Sbjct: 65 MSAYEDKLTK------------EQIESVSKYVLQQAQNNW 92
>gi|25008341|sp|Q9F1L9.1|CYC6_THEVL RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|12039024|dbj|BAB20065.1| cytochrome c553 [Thermosynechococcus vulcanus]
Length = 112
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 52 PVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTE 111
+++ F + A D+ G +F C CH GGGNV+ TL + L++ G+ +E
Sbjct: 10 AIAIALFVSLTPAALAADLANGAKVFSGNCAACHMGGGNVVMANKTLKKEALEQFGMYSE 69
Query: 112 DEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
D I + GK MP F RL DE I+ +A +V QA +GW
Sbjct: 70 DAIIYQVQHGKNAMP------------AFAGRLTDEQIQDVAAYVLDQAAKGWA 111
>gi|16329946|ref|NP_440674.1| cytochrome C553 [Synechocystis sp. PCC 6803]
gi|383321689|ref|YP_005382542.1| cytochrome c553 [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324858|ref|YP_005385711.1| cytochrome c553 [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490742|ref|YP_005408418.1| cytochrome c553 [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384436009|ref|YP_005650733.1| cytochrome c553 [Synechocystis sp. PCC 6803]
gi|451814105|ref|YP_007450557.1| cytochrome c553 [Synechocystis sp. PCC 6803]
gi|1169162|sp|P46445.1|CYC6_SYNY3 RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|468929|gb|AAA17489.1| cytochrome c553 [Synechocystis sp.]
gi|1652432|dbj|BAA17354.1| cytochrome c553 [Synechocystis sp. PCC 6803]
gi|339273041|dbj|BAK49528.1| cytochrome c553 [Synechocystis sp. PCC 6803]
gi|359271008|dbj|BAL28527.1| cytochrome c553 [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359274178|dbj|BAL31696.1| cytochrome c553 [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359277348|dbj|BAL34865.1| cytochrome c553 [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957838|dbj|BAM51078.1| cytochrome C553 [Bacillus subtilis BEST7613]
gi|451780074|gb|AGF51043.1| cytochrome c553 [Synechocystis sp. PCC 6803]
Length = 120
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 14/118 (11%)
Query: 49 LCLP--VSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN 106
+ LP + LG + + A D+ G ++F C CH+GG N I P TL + DL+ N
Sbjct: 15 IALPCLIFLGGIFSLGNTALAADLAHGKAIFAGNCAACHNGGLNAINPSKTLKMADLEAN 74
Query: 107 GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G ++ I G G MPGF +G R+ D D++ +A +V QA++GW
Sbjct: 75 GKNSVAAIVAQITNGNGAMPGF------KG------RISDSDMEDVAAYVLDQAEKGW 120
>gi|159026459|emb|CAO88971.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 88
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
+ G S+F C CH GG NV+ TL +DL + G D+ + I G G MP
Sbjct: 6 LADGASIFSANCASCHMGGKNVVNAAKTLKKEDLAKYGKDSVEAIVAQVTKGNGAMP--- 62
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL EDI+ +A +V +QA++GW
Sbjct: 63 ---------AFGGRLSAEDIEAVANYVLAQAEKGW 88
>gi|117916|sp|P00109.1|CYC6_ALAES RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
Length = 86
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
+DI G ++F C CH GG NVI P TL L N + + + I + GK MP
Sbjct: 1 IDINNGENIFTANCSACHAGGNNVIMPEKTLKKDALADNKMVSVNAITYQVTNGKNAMPA 60
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG+RL + DI+ +A FV +Q+D+GW
Sbjct: 61 ------------FGSRLAETDIEDVANFVLTQSDKGW 85
>gi|443664651|ref|ZP_21133486.1| cytochrome c6 [Microcystis aeruginosa DIANCHI905]
gi|443331527|gb|ELS46178.1| cytochrome c6 [Microcystis aeruginosa DIANCHI905]
Length = 106
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
+ G S+F C CH GG NV+ TL +DL + G D+ + I G G MP
Sbjct: 24 LADGASIFSANCASCHMGGKNVVNAAKTLKKEDLAKYGKDSVEAIVAQVTKGNGAMP--- 80
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL EDI+ +A +V +QA++GW
Sbjct: 81 ---------AFGGRLSAEDIEAVANYVLAQAEKGW 106
>gi|33240028|ref|NP_874970.1| cytochrome C [Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33237554|gb|AAP99622.1| Cytochrome C [Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 128
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 14/137 (10%)
Query: 28 FHWKQQLSMELELQKYDTYNVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDG 87
HW+ + ++ L+ + + ++ L +S F LA + G LF + C GCH
Sbjct: 3 LHWESKAPVDNFLKAFRCFILIALVISSVFGTPNRVLAN--NQTNGERLFIENCAGCHIN 60
Query: 88 GGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDE 147
GGN+I+ TL LKDL RNG+D D I + G G M G+ + G
Sbjct: 61 GGNIIRRSKTLRLKDLHRNGLDNADAIAKIAKEGIGIMSGYKDVLGENGD---------- 110
Query: 148 DIKLLAQFVKSQADQGW 164
L+A ++ Q+ + W
Sbjct: 111 --NLVANWIWEQSQKAW 125
>gi|378787239|gb|AFC39870.1| cytochrome c553 [Porphyra umbilicalis]
Length = 110
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 48 VLCLPVSLGFFHAAVS-LAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN 106
+L L FF + +A D+ G +F C CH GG N I P TL L+ N
Sbjct: 5 LLVLFTVFSFFAIGFTQVAFAADLDNGEKVFSANCAACHAGGNNAIMPDKTLKKDVLEAN 64
Query: 107 GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
++ D I + GK MP FG RL DEDI+ A +V SQ+++GW
Sbjct: 65 SMNGIDAITYQVKNGKNAMP------------AFGGRLVDEDIEDAASYVLSQSEKGW 110
>gi|78212527|ref|YP_381306.1| cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. CC9605]
gi|78196986|gb|ABB34751.1| cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. CC9605]
Length = 104
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 51 LPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDT 110
L +SLG SLA D G LF Q C GCH GGN+I+ G L LK L+R + T
Sbjct: 2 LLLSLG--SGGASLAAGRDASTGALLFEQHCAGCHINGGNIIRRGKNLKLKTLEREQIAT 59
Query: 111 EDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
D I + G+G+M G+ + L E +L+A++V QA W +
Sbjct: 60 VDAIAAIAREGRGQMSGYADV------------LGSEGDQLVAEWVLMQAQNAWTQ 103
>gi|403066549|ref|YP_006639038.1| cytochrome c553 (chloroplast) [Saccharina japonica]
gi|378787462|gb|AFC40092.1| cytochrome c553 (chloroplast) [Saccharina japonica]
Length = 112
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 55 LGFFHAAVSLAQ--------TVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN 106
GFF A ++L VDI G ++F C CH GG NVI P TL L N
Sbjct: 6 FGFFIACLALISFQNPAQVGAVDINNGENVFTANCSACHAGGNNVIMPEKTLKKDKLSEN 65
Query: 107 GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+++ I + GK MP FG RL + DI+ +A FV SQ+++ W
Sbjct: 66 QMNSVSAITYQVTNGKNAMPA------------FGGRLAETDIEDVANFVLSQSEKDW 111
>gi|218248576|ref|YP_002373947.1| cytochrome c class I [Cyanothece sp. PCC 8801]
gi|257061642|ref|YP_003139530.1| cytochrome c class I [Cyanothece sp. PCC 8802]
gi|218169054|gb|ACK67791.1| cytochrome c class I [Cyanothece sp. PCC 8801]
gi|256591808|gb|ACV02695.1| cytochrome c class I [Cyanothece sp. PCC 8802]
Length = 113
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 67 TVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMP 126
VD+ G +F C GCH G N+I+ G L LK LQ+N VD+ + I + GK M
Sbjct: 26 AVDLNHGEEIFSIHCAGCHPNGSNIIRRGKNLKLKALQKNKVDSLEAIAALVTNGKNNMS 85
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
+ ++ TP E+I+ ++ +V QA W K
Sbjct: 86 AYSDRLTP------------EEIQAVSVYVLEQAQNNWTK 113
>gi|81299050|ref|YP_399258.1| cytochrome C6 soluble cytochrome f [Synechococcus elongatus PCC
7942]
gi|81167931|gb|ABB56271.1| cytochrome C6 soluble cytochrome f [Synechococcus elongatus PCC
7942]
Length = 112
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A D+Q G LF+ C CH GGNVI TL + L+R G+D+ I +GK
Sbjct: 22 AIAADLQVGARLFQSNCTTCHLNGGNVINGQKTLRQEALRRYGMDSVAAIQKQVTYGKNA 81
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKI 167
MP FG++ +P E I+ +A +V +A++GW +
Sbjct: 82 MPAFGQRLSP------------EQIEAVATYVFDRAERGWTAL 112
>gi|11465666|ref|NP_053810.1| cytochrome c553 [Porphyra purpurea]
gi|1706231|sp|P51200.1|CYC6_PORPU RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|1276666|gb|AAC08086.1| cytochrome c553 (chloroplast) [Porphyra purpurea]
Length = 110
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 64 LAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKG 123
+A D+ G +F C CH GG N I P TL L+ N ++ D I + GK
Sbjct: 22 VAFAADLDNGEKVFSANCAACHAGGNNAIMPDKTLKKDVLEANSMNGIDAITYQVTNGKN 81
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MP FG RL DEDI+ A +V SQ+++GW
Sbjct: 82 AMPA------------FGGRLVDEDIEDAANYVLSQSEKGW 110
>gi|254422808|ref|ZP_05036526.1| Cytochrome c subfamily, putative [Synechococcus sp. PCC 7335]
gi|196190297|gb|EDX85261.1| Cytochrome c subfamily, putative [Synechococcus sp. PCC 7335]
Length = 164
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G LF + C CH GGN+I+ G L + ++RNG I + GKG MP + EK
Sbjct: 85 GAVLFTENCAACHANGGNIIRRGKNLKQRAMKRNGYGDISAIVSIVTQGKGIMPAYAEK- 143
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
L ++I +AQ+V Q+D GW
Sbjct: 144 -----------LSADEISAIAQYVHEQSDAGW 164
>gi|359459702|ref|ZP_09248265.1| cytochrome c6 PetJ [Acaryochloris sp. CCMEE 5410]
Length = 94
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 12/92 (13%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G LF C GCH GGN+I+ TL LK LQR+ DT + ++ G+ MPGF ++
Sbjct: 14 GAVLFETYCAGCHPKGGNIIRRRKTLKLKSLQRDSYDTLAPVINLITQGQNNMPGFADQ- 72
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
L D I+ +AQFV QA W
Sbjct: 73 -----------LNDTQIETVAQFVLEQASNNW 93
>gi|425445949|ref|ZP_18825967.1| Cytochrome c553 [Microcystis aeruginosa PCC 9443]
gi|389733937|emb|CCI02341.1| Cytochrome c553 [Microcystis aeruginosa PCC 9443]
Length = 106
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
+ G S+F C CH GG NV+ TL +DL + G D+ + I G G MP
Sbjct: 24 LADGASIFSANCASCHMGGKNVVNAAKTLKKEDLVKYGKDSVEAIVTQVTKGMGAMP--- 80
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG+RL EDI+ +A +V +QA++GW
Sbjct: 81 ---------AFGSRLSAEDIEAVANYVLAQAEKGW 106
>gi|67924953|ref|ZP_00518341.1| Cytochrome c, class I [Crocosphaera watsonii WH 8501]
gi|67853190|gb|EAM48561.1| Cytochrome c, class I [Crocosphaera watsonii WH 8501]
Length = 114
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
Q DI G +F C+GCH G N+I+ L L+ L+RN VD+ D I ++ +GK
Sbjct: 25 VQAEDINDGAKIFSIHCVGCHPQGKNIIRRAKNLKLRALKRNKVDSLDAIINLVTYGKNN 84
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
M + +K T E I+ ++++V QA W
Sbjct: 85 MSAYEDKLTK------------EQIESVSKYVLQQAQNNW 112
>gi|56751283|ref|YP_171984.1| cytochrome C6 soluble cytochrome f [Synechococcus elongatus PCC
6301]
gi|56686242|dbj|BAD79464.1| cytochrome C6 soluble cytochrome f [Synechococcus elongatus PCC
6301]
Length = 119
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A D+Q G LF+ C CH GGNVI TL + L+R G+D+ I +GK
Sbjct: 29 AIAADLQVGARLFQSNCTTCHLNGGNVINGQKTLRQEALRRYGMDSVAAIQKQVTYGKNA 88
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKI 167
MP FG++ +P E I+ +A +V +A++GW +
Sbjct: 89 MPAFGQRLSP------------EQIEAVATYVFDRAERGWTAL 119
>gi|425462355|ref|ZP_18841829.1| Cytochrome c553 [Microcystis aeruginosa PCC 9808]
gi|389824514|emb|CCI26329.1| Cytochrome c553 [Microcystis aeruginosa PCC 9808]
Length = 106
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
+ G S+F C CH GG NV+ TL +DL + G D+ + I G G MP
Sbjct: 24 LADGASIFSANCASCHMGGKNVVNAAKTLKKEDLAKYGKDSVEAIVTQVTKGMGAMP--- 80
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL EDI+ +A +V +QA++GW
Sbjct: 81 ---------AFGGRLSAEDIEAVANYVLAQAEKGW 106
>gi|443316332|ref|ZP_21045780.1| cytochrome c, mono- and diheme variants family [Leptolyngbya sp.
PCC 6406]
gi|442784051|gb|ELR93943.1| cytochrome c, mono- and diheme variants family [Leptolyngbya sp.
PCC 6406]
Length = 156
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D +F C GCH GGN+I+ G TL L RNGVD+E I + GKG M +
Sbjct: 72 DAPSAAQIFELNCAGCHAHGGNIIRRGKTLKSHALARNGVDSETAIAAIITQGKGIMSAY 131
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQA-DQGW 164
G + TP E+I LLA +V QA D W
Sbjct: 132 GNRFTP------------EEIDLLATYVWHQAQDDLW 156
>gi|428770444|ref|YP_007162234.1| cytochrome c class I [Cyanobacterium aponinum PCC 10605]
gi|428684723|gb|AFZ54190.1| cytochrome c class I [Cyanobacterium aponinum PCC 10605]
Length = 114
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A+TV + +F C GCH G N+I+ G L LK L RNG D+ + I + GK
Sbjct: 25 AETVINNQPQKIFELNCAGCHPNGNNIIRRGKNLKLKALHRNGYDSVEAITQIVSNGKNN 84
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
M F RL + +IK +A++V QA+ W
Sbjct: 85 MSAFSN------------RLSEREIKEVAEYVLQQAENNW 112
>gi|428213644|ref|YP_007086788.1| cytochrome c, mono- and diheme variants family [Oscillatoria
acuminata PCC 6304]
gi|428002025|gb|AFY82868.1| cytochrome c, mono- and diheme variants family [Oscillatoria
acuminata PCC 6304]
Length = 113
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G LF C GCH GGN+I+ G TL LK L +N DT++ I + GK MP + +
Sbjct: 33 GAKLFTVHCAGCHANGGNIIRRGKTLKLKALAKNHRDTQEAIAQLITQGKNPMPAYND-- 90
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
RL +I+ +A +V QA+ GW
Sbjct: 91 ----------RLTVPEIEAVAAYVLEQAEMGW 112
>gi|411118458|ref|ZP_11390839.1| cytochrome c, mono- and diheme variants family [Oscillatoriales
cyanobacterium JSC-12]
gi|410712182|gb|EKQ69688.1| cytochrome c, mono- and diheme variants family [Oscillatoriales
cyanobacterium JSC-12]
Length = 111
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 55 LGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEI 114
L FFH S A VDI G +F C CH GG NVI G TL L++ G+++ + I
Sbjct: 16 LAFFH---SPAYAVDISNGAKIFNANCSACHVGGNNVIISGKTLKKDALEKYGMNSLEAI 72
Query: 115 YHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GK MP F +RL I+ +A FV SQ+ +GW
Sbjct: 73 KAQVTNGKNAMPA------------FKSRLDQTQIEDVAAFVLSQSAKGW 110
>gi|116070861|ref|ZP_01468130.1| cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. BL107]
gi|116066266|gb|EAU72023.1| cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. BL107]
Length = 112
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 63 SLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGK 122
+ + +G +LF+Q C CH GGN+I+ G TL LK L+R G+ + D I + G
Sbjct: 20 GIGEAAASNEGAALFQQHCAACHINGGNIIRRGKTLKLKALERQGIASVDAIAQIAREGV 79
Query: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+M G+G+ P G +L+A+++ QA W
Sbjct: 80 GQMSGYGDVLGPGGD------------QLVAEWIWDQAQNAW 109
>gi|166368369|ref|YP_001660642.1| cytochrome c553 [Microcystis aeruginosa NIES-843]
gi|166090742|dbj|BAG05450.1| cytochrome c553 [Microcystis aeruginosa NIES-843]
Length = 88
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
+ G S+F C CH GG NV+ TL +DL + G D+ + I G G MP
Sbjct: 6 LADGASIFSANCASCHMGGKNVVNAAKTLKKEDLVKYGKDSVEAIVTQVTKGMGAMP--- 62
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL EDI+ +A +V +QA++GW
Sbjct: 63 ---------AFGGRLSAEDIEAVANYVLAQAEKGW 88
>gi|390441117|ref|ZP_10229293.1| Cytochrome c553 [Microcystis sp. T1-4]
gi|422302993|ref|ZP_16390350.1| Cytochrome c553 [Microcystis aeruginosa PCC 9806]
gi|425442214|ref|ZP_18822470.1| Cytochrome c553 [Microcystis aeruginosa PCC 9717]
gi|425456458|ref|ZP_18836169.1| Cytochrome c553 [Microcystis aeruginosa PCC 9807]
gi|425469384|ref|ZP_18848325.1| Cytochrome c553 [Microcystis aeruginosa PCC 9701]
gi|440752286|ref|ZP_20931489.1| cytochrome c6 [Microcystis aeruginosa TAIHU98]
gi|389716865|emb|CCH98950.1| Cytochrome c553 [Microcystis aeruginosa PCC 9717]
gi|389792095|emb|CCI12148.1| Cytochrome c553 [Microcystis aeruginosa PCC 9806]
gi|389802478|emb|CCI18492.1| Cytochrome c553 [Microcystis aeruginosa PCC 9807]
gi|389835580|emb|CCI33419.1| Cytochrome c553 [Microcystis sp. T1-4]
gi|389881019|emb|CCI38382.1| Cytochrome c553 [Microcystis aeruginosa PCC 9701]
gi|440176779|gb|ELP56052.1| cytochrome c6 [Microcystis aeruginosa TAIHU98]
Length = 106
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
+ G S+F C CH GG NV+ TL +DL + G D+ + I G G MP
Sbjct: 24 LADGASIFSANCASCHMGGKNVVNAAKTLKKEDLVKYGKDSVEAIVTQVTKGMGAMP--- 80
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL EDI+ +A +V +QA++GW
Sbjct: 81 ---------AFGGRLSAEDIEAVANYVLAQAEKGW 106
>gi|117933|sp|P00114.1|CYC6_SYNLI RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
Length = 87
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
D+ G +F C CH GGGNV+ TL + L++ G+++ED I + GK MP
Sbjct: 1 ADLANGAKVFSGNCAACHMGGGNVVMANKTLKKEALEQFGMNSEDAIIYQVQHGKNAMP- 59
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
F RL DE I+ +A +V QA +GW
Sbjct: 60 -----------AFAGRLTDEQIQDVAAYVLDQAAKGWA 86
>gi|425464991|ref|ZP_18844301.1| Cytochrome c553 [Microcystis aeruginosa PCC 9809]
gi|389832840|emb|CCI23190.1| Cytochrome c553 [Microcystis aeruginosa PCC 9809]
Length = 106
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
+ G S+F C CH GG NV+ TL +DL + G D+ + I G G MP
Sbjct: 24 LADGASIFSANCASCHMGGKNVVNAAKTLKKEDLVKYGKDSVEAIVTQVTKGMGAMP--- 80
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL EDI+ +A +V +QA++GW
Sbjct: 81 ---------AFGGRLSAEDIETVANYVLAQAEKGW 106
>gi|33862735|ref|NP_894295.1| cytochrome c, class IC:cytochrome c, class I [Prochlorococcus
marinus str. MIT 9313]
gi|33634651|emb|CAE20637.1| Cytochrome c, class IC:Cytochrome c, class I [Prochlorococcus
marinus str. MIT 9313]
Length = 125
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 67 TVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMP 126
+D G SLF+Q C GCH GGN+I+ TL LK L+RNG+D I V G G+M
Sbjct: 37 ALDTDAGGSLFKQHCSGCHVNGGNIIRRNKTLRLKALERNGLDNPQAIARVAREGIGQMS 96
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
G+ + L D +L+A ++ +QA W +
Sbjct: 97 GYEDV------------LGDSGDQLVAAWIWAQAQNAWTQ 124
>gi|254413618|ref|ZP_05027388.1| Cytochrome c subfamily [Coleofasciculus chthonoplastes PCC 7420]
gi|196179725|gb|EDX74719.1| Cytochrome c subfamily [Coleofasciculus chthonoplastes PCC 7420]
Length = 110
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A D KG +F C CH GG N++ TL L++ G+D+ ++I + GKG
Sbjct: 23 ALAADTAKGAKIFSANCAACHIGGNNIVMAQKTLKKDALEKYGMDSIEKIVYQAKNGKGA 82
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MP F RL D DI+ +A +V QA++GW
Sbjct: 83 MP------------AFIGRLSDSDIEDVAAYVIEQAEKGW 110
>gi|56750098|ref|YP_170799.1| cytochrome C6 [Synechococcus elongatus PCC 6301]
gi|81300439|ref|YP_400647.1| cytochrome c6 [Synechococcus elongatus PCC 7942]
gi|117934|sp|P25935.1|CYC6_SYNE7 RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|60416354|sp|P07497.2|CYC6_SYNP6 RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|256652|gb|AAB23485.1| cytochrome c-533 [Synechococcus]
gi|56685057|dbj|BAD78279.1| cytochrome c553 [Synechococcus elongatus PCC 6301]
gi|81169320|gb|ABB57660.1| cytochrome c553 [Synechococcus elongatus PCC 7942]
Length = 111
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 16/117 (13%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNG 107
+ L V L F ++ AQ D+ G +F C CH GG NV+ P TL DL + G
Sbjct: 9 IAALVVLLAF----IAPAQAADLAHGGQVFSANCAACHLGGRNVVNPAKTLQKADLDQYG 64
Query: 108 VDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ + + I GKG MP FG K L +DI +A +V Q+++GW
Sbjct: 65 MASIEAITTQVTNGKGAMPAFGSK------------LSADDIADVASYVLDQSEKGW 109
>gi|22298826|ref|NP_682073.1| cytochrome c553 [Thermosynechococcus elongatus BP-1]
gi|61222454|sp|P0A3X9.1|CYC6_THEEB RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|12039019|dbj|BAB20061.1| cytochrome c553 [Thermosynechococcus elongatus]
gi|22295007|dbj|BAC08835.1| cytochrome c553 [Thermosynechococcus elongatus BP-1]
Length = 112
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 52 PVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTE 111
+++ + A D+ G +F C CH GGGNV+ TL + L++ G+ +E
Sbjct: 10 AIAIALLVSLTPAALAADLANGAKVFSGNCAACHMGGGNVVMANKTLKKEALEQFGMYSE 69
Query: 112 DEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
D I + GK MP F RL DE I+ +A +V QA +GW
Sbjct: 70 DAIIYQVQHGKNAMP------------AFAGRLTDEQIQDVAAYVLDQAAKGWA 111
>gi|427418391|ref|ZP_18908574.1| cytochrome c, mono- and diheme variants family [Leptolyngbya sp.
PCC 7375]
gi|425761104|gb|EKV01957.1| cytochrome c, mono- and diheme variants family [Leptolyngbya sp.
PCC 7375]
Length = 110
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
+F C CH GGGN + P TL DL NG DT D I G MP FG + TP
Sbjct: 34 VFAANCAACHIGGGNAVNPAKTLKKDDLVANGKDTVDAITTQVTNGNAGMPSFGGRLTP- 92
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQGW 164
E ++ +A ++ +Q+D+GW
Sbjct: 93 -----------EQVENVAAYILAQSDKGW 110
>gi|30468224|ref|NP_849111.1| cytochrome c553 [Cyanidioschyzon merolae strain 10D]
gi|75272301|sp|Q85FS2.1|CYC6_CYAME RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|30409324|dbj|BAC76273.1| cytochrome c553 (chloroplast) [Cyanidioschyzon merolae strain 10D]
Length = 104
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D+ G +F C CH GG NVI P TL L L+ N +++ + I GK MP F
Sbjct: 22 DLAHGEQIFSANCAACHAGGNNVIMPEKTLKLDALEANQMNSVEAISTQVRNGKNAMPSF 81
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+RL D DI+ +A +V +QA +GW
Sbjct: 82 -------------SRLTDSDIEDVANYVLAQAKKGW 104
>gi|117927|sp|P00112.2|CYC6_MICAE RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
Length = 81
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 12/92 (13%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G S+F C CH GG NV+ TL +DL + G D+ + I G G MP
Sbjct: 2 GASIFSANCASCHMGGKNVVNAAKTLKKEDLVKYGKDSVEAIVTQVTKGMGAMP------ 55
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL EDI+ +A +V +QA++GW
Sbjct: 56 ------AFGGRLSAEDIEAVANYVLAQAEKGW 81
>gi|428223709|ref|YP_007107806.1| cytochrome c class I [Geitlerinema sp. PCC 7407]
gi|427983610|gb|AFY64754.1| cytochrome c class I [Geitlerinema sp. PCC 7407]
Length = 114
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 20/119 (16%)
Query: 55 LGFFHAAVSL--------AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN 106
LG + A++L A ++G +LF+ C CH G N+I P L K L+R
Sbjct: 5 LGLWLGAIALGGLLFCQAAWAESTREGAALFQANCRMCHSQGRNLIVPEKNLQQKTLERF 64
Query: 107 GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
++++ I +GK MP FGE L DE I +A +V QA QGWP
Sbjct: 65 AMNSQGAIARQVKYGKNVMPAFGES------------LSDEQIAAIADYVLDQAAQGWP 111
>gi|208435570|pdb|2ZBO|A Chain A, Crystal Structure Of Low-Redox-Potential Cytochrom C6 From
Brown Alga Hizikia Fusiformis At 1.6 A Resolution
gi|208435571|pdb|2ZBO|C Chain C, Crystal Structure Of Low-Redox-Potential Cytochrom C6 From
Brown Alga Hizikia Fusiformis At 1.6 A Resolution
gi|208435572|pdb|2ZBO|E Chain E, Crystal Structure Of Low-Redox-Potential Cytochrom C6 From
Brown Alga Hizikia Fusiformis At 1.6 A Resolution
gi|208435573|pdb|2ZBO|G Chain G, Crystal Structure Of Low-Redox-Potential Cytochrom C6 From
Brown Alga Hizikia Fusiformis At 1.6 A Resolution
gi|208435574|pdb|2ZBO|I Chain I, Crystal Structure Of Low-Redox-Potential Cytochrom C6 From
Brown Alga Hizikia Fusiformis At 1.6 A Resolution
gi|208435575|pdb|2ZBO|K Chain K, Crystal Structure Of Low-Redox-Potential Cytochrom C6 From
Brown Alga Hizikia Fusiformis At 1.6 A Resolution
Length = 86
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
DI G ++F C CH GG NVI P TL L N +++ I + GK MP
Sbjct: 1 ADINHGENVFTANCSACHAGGNNVIMPEKTLQKDALSTNQMNSVGAITYQVTNGKNAMPA 60
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL D+DI+ +A FV SQ+++ W
Sbjct: 61 ------------FGGRLSDDDIEDVASFVLSQSEKSW 85
>gi|425449578|ref|ZP_18829415.1| Cytochrome c553 [Microcystis aeruginosa PCC 7941]
gi|389763616|emb|CCI09852.1| Cytochrome c553 [Microcystis aeruginosa PCC 7941]
Length = 106
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
+ G S+F C CH GG NV+ TL +DL + G D+ + + G G MP
Sbjct: 24 LADGASIFSANCASCHMGGKNVVNAAKTLKKEDLVKYGKDSVEALVTQVTKGMGAMP--- 80
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL EDI+ +A +V +QA++GW
Sbjct: 81 ---------AFGGRLSAEDIETVANYVLAQAEKGW 106
>gi|428206371|ref|YP_007090724.1| cytochrome c class I [Chroococcidiopsis thermalis PCC 7203]
gi|428008292|gb|AFY86855.1| cytochrome c class I [Chroococcidiopsis thermalis PCC 7203]
Length = 117
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNG 107
VL + V + + +LA I G +F C GCH GGN+++ G L K L++ G
Sbjct: 12 VLVMLVGMAIAFSTPALAAETPI--GAKIFETQCAGCHINGGNIVRRGKNLKQKALKKYG 69
Query: 108 VDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
+D+ + I ++ G+G M + + RL E+I+ ++ +V QA+ GW K
Sbjct: 70 MDSIEAIANIVTNGQGNMSAYKD------------RLTAEEIQAVSAYVLQQAEAGWRK 116
>gi|434398816|ref|YP_007132820.1| cytochrome c class I [Stanieria cyanosphaera PCC 7437]
gi|428269913|gb|AFZ35854.1| cytochrome c class I [Stanieria cyanosphaera PCC 7437]
Length = 112
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 54 SLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDE 113
S+ FF +VS + D+ G +F C GCH GGN+++ G L K LQ+N +D+ +
Sbjct: 16 SVLFFSNSVSAS---DLDTGAKIFEVNCAGCHIHGGNIVRRGKNLKQKTLQKNKLDSTEA 72
Query: 114 IYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
I + GK MP + + RL+ +I+ +A +V QA W
Sbjct: 73 IATLVTHGKNNMPAYQD------------RLELAEIEAVANYVLQQAQADWK 112
>gi|427729498|ref|YP_007075735.1| cytochrome c, mono- and diheme variants family [Nostoc sp. PCC
7524]
gi|427365417|gb|AFY48138.1| cytochrome c, mono- and diheme variants family [Nostoc sp. PCC
7524]
Length = 110
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A DI GV +F C GCH GGN+I+ G L K L++ G+D+ + I + GK
Sbjct: 22 ANAADIANGVKIFDIHCAGCHINGGNIIRRGKNLHQKALKKYGMDSIEAITSIVTNGKSN 81
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
M + + RL +++I+ +A +V +QA+ W
Sbjct: 82 MSAYKD------------RLTEQEIQDVAAYVLTQAETNW 109
>gi|126657090|ref|ZP_01728261.1| Cytochrome c, class I [Cyanothece sp. CCY0110]
gi|126621633|gb|EAZ92343.1| Cytochrome c, class I [Cyanothece sp. CCY0110]
Length = 111
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 62 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKD-LQRNGVDTEDEIYHVTYF 120
VS A D G +F C CH GGGNV+ + KD L++NGVDT ++I +
Sbjct: 20 VSPALAGDASAGKGIFTANCASCHMGGGNVVAGASKGLAKDALEKNGVDTLEKIVYQVTN 79
Query: 121 GKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GK MP F RL + I+ +A +V SQA+ GW
Sbjct: 80 GKNAMP------------AFQGRLNAQQIEDVATYVLSQAETGW 111
>gi|51209855|ref|YP_063519.1| cytochrome c553 [Gracilaria tenuistipitata var. liui]
gi|75254629|sp|Q6B941.1|CYC6_GRATL RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|50657609|gb|AAT79594.1| cytochrome c553 [Gracilaria tenuistipitata var. liui]
Length = 108
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 58 FHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHV 117
F V L D+ G +F C CH G N I P TL L N +++ + I +
Sbjct: 14 FTNNVQLTFAADLDAGEQIFSANCSACHANGNNAIMPDKTLKSDALSENKMNSIEAITNQ 73
Query: 118 TYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GK MP FG RL DEDI+ +A +V ++++ GW
Sbjct: 74 VKNGKNAMPA------------FGGRLADEDIENVANYVLNKSENGW 108
>gi|425436649|ref|ZP_18817084.1| Cytochrome c553 [Microcystis aeruginosa PCC 9432]
gi|389678603|emb|CCH92558.1| Cytochrome c553 [Microcystis aeruginosa PCC 9432]
Length = 106
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
+ G S+F C CH GG NV+ TL +DL + G D+ + I G G MP
Sbjct: 24 LADGASIFSANCASCHMGGKNVVNAAKTLKKEDLVKYGKDSVEAIVTQVTKGMGAMP--- 80
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G RL EDI+ +A +V +QA++GW
Sbjct: 81 ---------ALGGRLSAEDIEAVANYVLAQAEKGW 106
>gi|61252176|sp|P0A3Y0.1|CYC6_SYNEN RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
gi|159162152|pdb|1C6S|A Chain A, The Solution Structure Of Cytochrome C6 From The
Thermophilic Cyanobacterium Synechococcus Elongatus,
Nmr, 20 Structures
Length = 87
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
D+ G +F C CH GGGNV+ TL + L++ G+ +ED I + GK MP
Sbjct: 1 ADLANGAKVFSGNCAACHMGGGNVVMANKTLKKEALEQFGMYSEDAIIYQVQHGKNAMP- 59
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
F RL DE I+ +A +V QA +GW
Sbjct: 60 -----------AFAGRLTDEQIQDVAAYVLDQAAKGWA 86
>gi|218437874|ref|YP_002376203.1| cytochrome C class I [Cyanothece sp. PCC 7424]
gi|218170602|gb|ACK69335.1| cytochrome c class I [Cyanothece sp. PCC 7424]
Length = 111
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 15/116 (12%)
Query: 49 LCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGV 108
+ L VSLG F + T +I +G LF+ C+GCH G N+I+ G TL + L+R +
Sbjct: 10 IILLVSLGSFPL---VGLTEEIGQGEQLFQTYCVGCHPNGNNIIRRGKTLKSQALKRYKM 66
Query: 109 DTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
D+ + I ++ +GK M F + RL +I+ +A++V QA++ W
Sbjct: 67 DSLEAITNLVTYGKNNMSAFQD------------RLSQPEIESVARYVLEQAEKDW 110
>gi|428311285|ref|YP_007122262.1| cytochrome c, mono- and diheme variants family [Microcoleus sp. PCC
7113]
gi|428252897|gb|AFZ18856.1| cytochrome c, mono- and diheme variants family [Microcoleus sp. PCC
7113]
Length = 137
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A VD G +F C CH GG NV+ TL + L++ G+++ D I + GK
Sbjct: 48 ALAVDAASGAKIFSANCAACHAGGRNVVMADKTLKKEALEKYGMNSADAIINQVTNGKNA 107
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
MP F + TP Q ED+ A +V Q+++GW K
Sbjct: 108 MPAFKGRLTP---------AQIEDV---ASYVLGQSEKGWTK 137
>gi|359459233|ref|ZP_09247796.1| cytochrome c6 PetJ [Acaryochloris sp. CCMEE 5410]
Length = 109
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
+F C CH GG NV+Q TL L NG+D+ D I + GKG MP FG +P
Sbjct: 34 VFNANCAACHAGGNNVVQADKTLKADALSANGMDSADAIINQVTNGKGGMPAFGASLSP- 92
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQ 162
DI+ +A +V QAD+
Sbjct: 93 -----------ADIENVAAYVLDQADK 108
>gi|307152662|ref|YP_003888046.1| cytochrome c class I [Cyanothece sp. PCC 7822]
gi|306982890|gb|ADN14771.1| cytochrome c class I [Cyanothece sp. PCC 7822]
Length = 114
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
+I +G +F C GCH G N+I+ G TL + L++ +D+ + I ++ GK M F
Sbjct: 30 EIGEGAKIFNTHCAGCHPNGNNIIRRGKTLQARALKKYKMDSLEAISNLVANGKNNMSAF 89
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
E RL +++IK +AQ+V QA + W
Sbjct: 90 KE------------RLSEQEIKTVAQYVLEQAPKNW 113
>gi|158337014|ref|YP_001518189.1| cytochrome c6 PetJ [Acaryochloris marina MBIC11017]
gi|158307255|gb|ABW28872.1| cytochrome c6 PetJ [Acaryochloris marina MBIC11017]
Length = 109
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
+F C CH GG NV+Q TL L NG+D+ D I + GKG MP FG +P
Sbjct: 34 VFNANCAACHAGGNNVVQADKTLKADALSANGMDSADAIINQVTNGKGGMPAFGASLSP- 92
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQ 162
DI+ +A +V QAD+
Sbjct: 93 -----------ADIENVAAYVLDQADK 108
>gi|117921|sp|P00116.1|CYC6_APHFL RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
Length = 87
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
D G +LF+ C CH GGGN++ TL + L++ + + I GKG MP
Sbjct: 1 ADTVSGAALFKANCAQCHVGGGNLVNRAKTLKKEALEKYNMYSAKAIIAQVTHGKGAMP- 59
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
FG RL+ E I+ +A +V QAD GW K
Sbjct: 60 -----------AFGIRLKAEQIENVAAYVLEQADNGWKK 87
>gi|159903119|ref|YP_001550463.1| hypothetical protein P9211_05781 [Prochlorococcus marinus str. MIT
9211]
gi|159888295|gb|ABX08509.1| Hypothetical protein P9211_05781 [Prochlorococcus marinus str. MIT
9211]
Length = 128
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G +LF + C GCH GGN+I+ TL LKDLQRNG+DT + I + G G M G+ E+
Sbjct: 46 GENLFIKHCSGCHINGGNIIRRNKTLKLKDLQRNGIDTPEAISKIAREGIGIMSGY-EEV 104
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G +DE +LA ++ Q+ + W
Sbjct: 105 LGEG--------RDE---VLAHWIWKQSQKAW 125
>gi|113476173|ref|YP_722234.1| cytochrome c, class I [Trichodesmium erythraeum IMS101]
gi|110167221|gb|ABG51761.1| cytochrome c, class I [Trichodesmium erythraeum IMS101]
Length = 131
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 53 VSLGFFHAAVSL---AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVD 109
V L V+L A DI G +F+ C CH GG N I P TL DL++ G+
Sbjct: 28 VVLTIMFVVVALQPSAFAADIASGKGVFQGNCAACHIGGKNNINPAKTLQKSDLEKYGMF 87
Query: 110 TEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
++I + GK MP FG RL+ + I+ +A +V +QA+ GW
Sbjct: 88 AAEKIIYQVTNGKNAMPAFGR------------RLKPQQIENVAAYVMAQAEGGW 130
>gi|78779100|ref|YP_397212.1| cytochrome c [Prochlorococcus marinus str. MIT 9312]
gi|78712599|gb|ABB49776.1| cytochrome c [Prochlorococcus marinus str. MIT 9312]
Length = 117
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 13/97 (13%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGA-TLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
DI+ G ++FR C GCH GG+V+ G+ +L L DL++ G+ E I + G G M G
Sbjct: 32 DIRNGETIFRNVCAGCHVRGGSVVLKGSKSLKLSDLEKRGIADEISIAKIANEGIGYMKG 91
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ +K L+D + K+LAQ++ A+ GW
Sbjct: 92 YKKK------------LKDGEDKVLAQWIIQNAENGW 116
>gi|428300652|ref|YP_007138958.1| cytochrome c class I [Calothrix sp. PCC 6303]
gi|428237196|gb|AFZ02986.1| cytochrome c class I [Calothrix sp. PCC 6303]
Length = 112
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 72 KGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEK 131
G +F C GCH GGN+I+ G L LK L++N +D+ D I + GK M + +
Sbjct: 31 NGAKIFESNCAGCHINGGNIIRRGKNLKLKVLRKNNMDSVDAISVIVANGKNNMSAYQD- 89
Query: 132 CTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
RL E+I+ ++ +V QA+ W
Sbjct: 90 -----------RLTVEEIQAVSTYVLQQAENNWK 112
>gi|427418865|ref|ZP_18909048.1| cytochrome c, mono- and diheme variants family [Leptolyngbya sp.
PCC 7375]
gi|425761578|gb|EKV02431.1| cytochrome c, mono- and diheme variants family [Leptolyngbya sp.
PCC 7375]
Length = 108
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 15/118 (12%)
Query: 51 LPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDT 110
L SL F + ++ A T D K LF C GCH G N+I+ G L + L+R+G ++
Sbjct: 6 LAASLWFSTSTMAWADTTDSSK---LFETHCAGCHPNGANIIRRGKNLKQRALKRHGYES 62
Query: 111 EDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIE 168
D I + GKG M + ++ L ++I LA +V QA W ++
Sbjct: 63 IDAIATLITNGKGLMSAYSDQ------------LSKDEITSLANYVLEQAAVNWTSVK 108
>gi|67923638|ref|ZP_00517108.1| Cytochrome c, class I [Crocosphaera watsonii WH 8501]
gi|416398782|ref|ZP_11686851.1| Cytochrome C553 (soluble cytochrome f) [Crocosphaera watsonii WH
0003]
gi|67854520|gb|EAM49809.1| Cytochrome c, class I [Crocosphaera watsonii WH 8501]
gi|357262521|gb|EHJ11641.1| Cytochrome C553 (soluble cytochrome f) [Crocosphaera watsonii WH
0003]
Length = 111
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 50/104 (48%), Gaps = 13/104 (12%)
Query: 62 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQ-PGATLFLKDLQRNGVDTEDEIYHVTYF 120
S A D G +F C CH GGGNV+ P L L++NGVDT ++I +
Sbjct: 20 ASPALAGDAGAGKGIFTANCNACHMGGGNVVAGPSKGLAKNYLEKNGVDTLEKIVYQVTN 79
Query: 121 GKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GK MP FG RL + I+ +A +V SQA+ GW
Sbjct: 80 GKNAMP------------AFGGRLDAQKIEDVATYVLSQAEAGW 111
>gi|428203525|ref|YP_007082114.1| cytochrome c, mono- and diheme variants family [Pleurocapsa sp. PCC
7327]
gi|427980957|gb|AFY78557.1| cytochrome c, mono- and diheme variants family [Pleurocapsa sp. PCC
7327]
Length = 111
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D+ KG LF C CH GG NV+ TL DL++ +++ + I GK MP
Sbjct: 27 DLAKGAKLFSANCAACHAGGKNVVNAAKTLQKGDLEKYSMNSLEAIKTQIAKGKNAMP-- 84
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
F RL +++I +A +V SQA++GW
Sbjct: 85 ----------AFAGRLSEQEIDDVANYVLSQAEKGW 110
>gi|428226667|ref|YP_007110764.1| cytochrome c class I [Geitlerinema sp. PCC 7407]
gi|427986568|gb|AFY67712.1| cytochrome c class I [Geitlerinema sp. PCC 7407]
Length = 110
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 66 QTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRM 125
Q D+ G +F C CH GGGNV+ TL DL++ G+ + + I GK M
Sbjct: 24 QAADLNSGAQVFGANCAACHIGGGNVVNAAKTLKKADLEQYGMASTEAIQTQVTNGKNAM 83
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
P +F RL + I+ +A +V +QA++GW
Sbjct: 84 P------------SFKGRLTAQQIEDVAAYVLAQAEKGW 110
>gi|75907751|ref|YP_322047.1| cytochrome c6 [Anabaena variabilis ATCC 29413]
gi|75701476|gb|ABA21152.1| Cytochrome c, class I [Anabaena variabilis ATCC 29413]
Length = 111
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Query: 49 LCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGV 108
L L L S A VD G +F C GCH G N+I+ G L K L++ G+
Sbjct: 7 LVLITLLFLISTLTSPASAVDTANGEQIFSVHCAGCHINGSNIIRRGKNLQKKALKKYGM 66
Query: 109 DTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
D+ + + + GK M + + RL +++I+ +A +V QA++GW
Sbjct: 67 DSLEAVAAIVTNGKNNMSAYKD------------RLSEQEIQNVAAYVLEQAEKGW 110
>gi|282897250|ref|ZP_06305252.1| Cytochrome c, class I [Raphidiopsis brookii D9]
gi|281197902|gb|EFA72796.1| Cytochrome c, class I [Raphidiopsis brookii D9]
Length = 112
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 47 NVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN 106
+VL L +++ F + A VD G S+F+ C CH GG N++ TL + L++
Sbjct: 6 SVLLLGIAI-FTLTFTNSALAVDATIGASVFKANCAQCHIGGKNLVNAAKTLKKEALEKY 64
Query: 107 GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+ +++ I GKG MP FG+ RL+ I+ +A +V QA +GW
Sbjct: 65 GMYSQEAIVTQVTKGKGAMPAFGK------------RLKQNQIENVAAYVLEQAGKGW 110
>gi|352094584|ref|ZP_08955755.1| cytochrome c class I [Synechococcus sp. WH 8016]
gi|351680924|gb|EHA64056.1| cytochrome c class I [Synechococcus sp. WH 8016]
Length = 144
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 24 PLKSFHWKQQLSMELELQKYDTYNV-LCLPVSL-GFFHAAVSLAQTVDIQKGVSLFRQAC 81
PLK +K+ M + L + + LC+ ++L G A + VD+ G LF C
Sbjct: 9 PLKWIGFKKVTPMVM-LNPISLFALMLCISLNLLGVSPAFAASTPAVDLDHGGQLFSANC 67
Query: 82 IGCHDGGGNVIQPGATLFLKDLQRN----GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQ 137
CH GGGNVI TL DLQ + G D + I H GK MP
Sbjct: 68 AACHMGGGNVISASRTLSQSDLQAHLNEYGDDHIEAIEHQIENGKNAMP----------- 116
Query: 138 CTFGARLQDEDIKLLAQFVKSQADQGWPK 166
+F +L ++DI +A +V+ +A++GW +
Sbjct: 117 -SFVGKLSEQDIIDVAAYVELKAEKGWQR 144
>gi|33866050|ref|NP_897609.1| cytochrome C6 (soluble cytochrome F) (cytochrome c553)
[Synechococcus sp. WH 8102]
gi|33639025|emb|CAE08031.1| cytochrome C6 (soluble cytochrome F) (cytochrome c553)
[Synechococcus sp. WH 8102]
Length = 110
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 72 KGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEK 131
+G LF Q C GCH GGN+I+ G L L L+R G+D+ + I + G G+M G+G+K
Sbjct: 27 EGAVLFGQHCAGCHVNGGNIIRRGKNLKLATLKRQGLDSTEAIASIARKGIGQMSGYGDK 86
Query: 132 CTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
G +L+A ++ QA W +
Sbjct: 87 LGEGGD------------QLVAGWILEQAQNAWTQ 109
>gi|254431160|ref|ZP_05044863.1| cytochrome c6 [Cyanobium sp. PCC 7001]
gi|197625613|gb|EDY38172.1| cytochrome c6 [Cyanobium sp. PCC 7001]
Length = 125
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G LF C GCH GGN+I+ TL L L+R GV +E I + G G+M G+G+
Sbjct: 43 GARLFENHCAGCHLNGGNIIRRRKTLRLAALERQGVASEQAIAAIAAAGVGQMGGYGDV- 101
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
L D+ + +A++V QA GWP+
Sbjct: 102 -----------LGDDGVVAVARWVWEQAQAGWPR 124
>gi|116075400|ref|ZP_01472660.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp.
RS9916]
gi|116067597|gb|EAU73351.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp.
RS9916]
Length = 125
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 54 SLGFFHAAVSL---AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDT 110
SLG A +++ V G LF C GCH GGN+I+ G TL L L++NG+D
Sbjct: 21 SLGIVLATLAIFPGVSPVLATSGQELFSNHCAGCHVNGGNIIRRGRTLKLAALKKNGLDD 80
Query: 111 EDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
D I V G G+M G+G+ G DE L+A ++ QA W
Sbjct: 81 PDAIARVAREGIGQMSGYGDVLGVGG---------DE---LVAAWIWEQAQNAW 122
>gi|427719088|ref|YP_007067082.1| cytochrome c class I [Calothrix sp. PCC 7507]
gi|427351524|gb|AFY34248.1| cytochrome c class I [Calothrix sp. PCC 7507]
Length = 111
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 17/117 (14%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNG 107
+ CL S+ F +A++L D G +F C GCH GGN+++ G TL K L+R G
Sbjct: 11 IFCLLTSI-FTPSAIAL----DTVNGSQIFSVQCAGCHLNGGNIVRRGKTLKQKALKRYG 65
Query: 108 VDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+D+ + I + GK M + + RL + I+ +A +V QA++ W
Sbjct: 66 MDSLEAITDIVTNGKSNMSAYKD------------RLNAQQIQDVAAYVLEQAEKDW 110
>gi|220909229|ref|YP_002484540.1| cytochrome C class I [Cyanothece sp. PCC 7425]
gi|219865840|gb|ACL46179.1| cytochrome c class I [Cyanothece sp. PCC 7425]
Length = 111
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 12/89 (13%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
+F C CH GG NVI TL + L++ G+++ D I + GK MP
Sbjct: 33 VFSANCAACHMGGNNVIMANKTLKKEALEQFGMNSADAIIYQVQHGKNAMP--------- 83
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL DE I+ +A +V Q+++GW
Sbjct: 84 ---AFGGRLSDEQIQDVAAYVLEQSEKGW 109
>gi|116075427|ref|ZP_01472687.1| possible cytochrome c6 [Synechococcus sp. RS9916]
gi|116067624|gb|EAU73378.1| possible cytochrome c6 [Synechococcus sp. RS9916]
Length = 121
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 18/122 (14%)
Query: 48 VLCLPVSL-GFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN 106
VL L + L G A SLA D G +F C CH GGGNVI+ TL DLQ +
Sbjct: 11 VLVLVIGLIGALPATASLANP-DSGNGSQIFSTNCAACHMGGGNVIRASRTLSEADLQAH 69
Query: 107 ----GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQ 162
D + I H GK MP + +L D+DI +A +V+ QA++
Sbjct: 70 LDSYSQDHLEAIEHQIEAGKNAMP------------PYQGKLSDDDIADVAAYVEEQAER 117
Query: 163 GW 164
GW
Sbjct: 118 GW 119
>gi|427712953|ref|YP_007061577.1| cytochrome c, mono- and diheme variants family [Synechococcus sp.
PCC 6312]
gi|427377082|gb|AFY61034.1| cytochrome c, mono- and diheme variants family [Synechococcus sp.
PCC 6312]
Length = 112
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 67 TVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMP 126
DI G +F C CH GGGNV+ TL + L++ G+++ D I + GK MP
Sbjct: 25 AADIADGAKVFSANCAACHMGGGNVVMANKTLKKEALEQFGMNSADAIMYQVQNGKNAMP 84
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
FG RL + I+ +A +V Q+ + W
Sbjct: 85 ------------AFGGRLSEAQIENVAAYVLDQSSKNWA 111
>gi|186681641|ref|YP_001864837.1| cytochrome C6 [Nostoc punctiforme PCC 73102]
gi|186464093|gb|ACC79894.1| cytochrome c, class I [Nostoc punctiforme PCC 73102]
Length = 111
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNG 107
V+ L +++ F A S A D G +F C CH GG N++Q L + L++ G
Sbjct: 7 VILLGIAI-FTFAFSSPAFAGDAVSGAKVFSANCASCHAGGKNLVQAAKNLKKEALEKYG 65
Query: 108 VDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ + + I GK MP FG+ RL+ + I+ +A +V SQAD+GW
Sbjct: 66 LYSAEAIIAQVTNGKNAMPAFGK------------RLKADQIENVAAYVLSQADKGW 110
>gi|75907423|ref|YP_321719.1| cytochrome c6 [Anabaena variabilis ATCC 29413]
gi|90101226|sp|Q3MDW2.1|CYC6_ANAVT RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|39235|emb|CAA44876.1| cytochrome c-553 [Anabaena variabilis]
gi|75701148|gb|ABA20824.1| Cytochrome c, class I [Anabaena variabilis ATCC 29413]
Length = 111
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 46 YNVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR 105
++++ L ++L F A S A D+ G +F C CH GG N++Q TL +DL++
Sbjct: 5 FSLVLLGIAL-FTFAFSSPALAADVANGAKIFSANCASCHAGGKNLVQAQKTLKKEDLEK 63
Query: 106 NGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+ + + I GK MP F +G RL+ + I+ +A +V QAD+ W
Sbjct: 64 FGMYSAEAIIAQVTNGKNAMPAF------KG------RLKPDQIEDVAAYVLGQADKSW 110
>gi|414079482|ref|YP_007000906.1| cytochrome c class I [Anabaena sp. 90]
gi|413972761|gb|AFW96849.1| cytochrome c class I [Anabaena sp. 90]
Length = 112
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 47 NVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN 106
+VL L +++ F A +S A D G +F C CH GG N++ TL DL++
Sbjct: 6 SVLLLGIAI-FTFAFISPALAADAASGAKVFSANCASCHAGGRNLVNAAKTLKKADLEKY 64
Query: 107 GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
G+ + + I + GKG MP F RL+ E I+ +A +V QAD GW K
Sbjct: 65 GMYSAEAIVYQVTNGKGAMP------------AFKGRLKAEQIENVAAYVLQQADNGWKK 112
>gi|37521475|ref|NP_924852.1| cytochrome c553 [Gloeobacter violaceus PCC 7421]
gi|35212472|dbj|BAC89847.1| cytochrome c553 [Gloeobacter violaceus PCC 7421]
Length = 112
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 13/115 (11%)
Query: 53 VSLGFFHAAVSLAQT-VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTE 111
VS+ A V LA+ D+ G +F+ C CH GG N+++P TL + L G+ +
Sbjct: 10 VSISVLGAGVILAEAQPDLAAGEKIFKANCAACHAGGNNIVEPEKTLKKEALAHFGMGSP 69
Query: 112 DEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
I GK MP FG L E+I+ +A +V AD+ W K
Sbjct: 70 AAIIQQVTGGKNAMP------------AFGGELSTEEIRQVASYVLEMADKDWQK 112
>gi|170078986|ref|YP_001735624.1| cytochrome c6 [Synechococcus sp. PCC 7002]
gi|22652035|gb|AAN03578.1|AF381046_3 putative cytochrome c6-2 [Synechococcus sp. PCC 7002]
gi|169886655|gb|ACB00369.1| cytochrome c6 [Synechococcus sp. PCC 7002]
Length = 115
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D+ +G +F C GCH GGN+++ G L + + +NG + + I ++ GKG M +
Sbjct: 30 DLDQGAQIFEAHCAGCHLNGGNIVRRGKNLKKRAMAKNGYTSVEAIANLVTQGKGNMSAY 89
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+K L E+I+ ++Q+V Q+ W
Sbjct: 90 GDK------------LSSEEIQAVSQYVLQQSQTDW 113
>gi|428171466|gb|EKX40383.1| hypothetical protein GUITHDRAFT_75684 [Guillardia theta CCMP2712]
Length = 114
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 71 QKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGE 130
+ G +F CI CH GGGN + P TL L+R+G I + GK MP +G
Sbjct: 26 RSGQEVFNTKCIACHQGGGNTLNPSKTLTEDSLKRDGYSDVSAIIDIVTKGKRPMPAYGI 85
Query: 131 KCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
K G L ++I+ ++ +V QA GW
Sbjct: 86 KSKKLG-------LDPDEIEAVSSYVLEQAKSGW 112
>gi|218246835|ref|YP_002372206.1| cytochrome c class I [Cyanothece sp. PCC 8801]
gi|257059876|ref|YP_003137764.1| cytochrome c class I [Cyanothece sp. PCC 8802]
gi|226722267|sp|B7JYX3.1|CYC6_CYAP8 RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|218167313|gb|ACK66050.1| cytochrome c class I [Cyanothece sp. PCC 8801]
gi|256590042|gb|ACV00929.1| cytochrome c class I [Cyanothece sp. PCC 8802]
Length = 111
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D G ++F C CH GG N++ P TL DL+ NG+ + D I GK MP F
Sbjct: 27 DAAAGKTVFTAKCAQCHLGGKNLVNPAKTLSKADLEANGMASLDAIITQVTNGKAAMPAF 86
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+ L E I+ +A +V +QA+ W
Sbjct: 87 GK------------LLTAEQIENVATYVLAQAEADW 110
>gi|452821069|gb|EME28104.1| peroxisomal membrane MPV17/PMP22-like protein isoform 2 [Galdieria
sulphuraria]
Length = 375
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 14/81 (17%)
Query: 75 SLFRQACIGCHDGGGNVI--QPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
+LF Q C CH+ GGN+I TLF K L++NG ++ I +T GKG MPG+ K
Sbjct: 282 TLFEQNCAACHNNGGNIIFYARNKTLFPKALEKNGYLNKESISDLTKQGKGAMPGYANK- 340
Query: 133 TPRGQCTFGARLQDEDIKLLA 153
L DE+I LL+
Sbjct: 341 -----------LNDEEISLLS 350
>gi|318041986|ref|ZP_07973942.1| cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. CB0101]
Length = 128
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
+ G LF Q C GCH GGN+I+ G TL L L+R +E I + G G+M G
Sbjct: 43 LADGAQLFEQHCAGCHVNGGNIIRRGKTLKLAALERENRASEAAIAAIAAAGVGQMSG-- 100
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
+G+ L DE +A +V QA GWPK
Sbjct: 101 ----------YGSVLGDEGTAEVAAWVWQQALAGWPK 127
>gi|126696110|ref|YP_001090996.1| cytochrome c [Prochlorococcus marinus str. MIT 9301]
gi|126543153|gb|ABO17395.1| cytochrome c [Prochlorococcus marinus str. MIT 9301]
Length = 117
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGA-TLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
DI+ G ++FR C GCH GG+V+ G+ +L L DL++ G+ + I + G G M G
Sbjct: 32 DIRDGETIFRNVCAGCHVRGGSVVLKGSKSLKLSDLEKRGIADVNSITIIANEGIGFMKG 91
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
+ K L D + K+LAQ++ A++GW
Sbjct: 92 YKNK------------LNDGEDKVLAQWIIQNAEKGWK 117
>gi|113953743|ref|YP_731112.1| cytochrome C, class IC:cytochrome C, class I [Synechococcus sp.
CC9311]
gi|113881094|gb|ABI46052.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp.
CC9311]
Length = 108
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 16/114 (14%)
Query: 53 VSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTED 112
++L F + +LA ++ G SLF+ C CH G N+I+ G TL +K L + G+D+ +
Sbjct: 10 LALMLFLPSTALA----VETGASLFQNNCASCHPNGENIIRRGRTLKMKALTKRGLDSSE 65
Query: 113 EIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
I V G G+M G+ + A +D D+ +A++V QA + W +
Sbjct: 66 AIAQVAREGIGQMSGYAD-----------ALGEDGDV-FVAEWVWQQAQKAWTQ 107
>gi|119509989|ref|ZP_01629130.1| Cytochrome c, class I [Nodularia spumigena CCY9414]
gi|119512939|ref|ZP_01632001.1| Cytochrome c, class I [Nodularia spumigena CCY9414]
gi|119462392|gb|EAW43367.1| Cytochrome c, class I [Nodularia spumigena CCY9414]
gi|119465313|gb|EAW46209.1| Cytochrome c, class I [Nodularia spumigena CCY9414]
Length = 111
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 24/133 (18%)
Query: 32 QQLSMELELQKYDTYNVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNV 91
Q+L + L + + ++N LP A + G +F C GCH GGN+
Sbjct: 2 QKLLILLLVTIFLSFNNFTLP------------AIAAETNHGAEVFSVHCAGCHINGGNI 49
Query: 92 IQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKL 151
I+ G L L+R G+DT + + + GK M + ++ TP ++I+
Sbjct: 50 IRRGKNLKKPALKRYGMDTIEAVTSIITNGKNNMSAYQDRLTP------------QEIQE 97
Query: 152 LAQFVKSQADQGW 164
+A +V QA GW
Sbjct: 98 VATYVLEQAQTGW 110
>gi|117935|sp|P00115.1|CYC6_SYNP3 RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-552;
AltName: Full=Cytochrome c-553; AltName: Full=Cytochrome
c553; AltName: Full=Soluble cytochrome f
gi|65564|pir||CCYC6 cytochrome c6 - Synechococcus sp. (ATCC 27167)
Length = 87
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
DI G +F C CH GGGNV+ TL + L++ G+++ D I + GK MP
Sbjct: 1 ADIADGAKVFSANCAACHMGGGNVVMANKTLKKEALEQFGMNSADAIMYQVQNGKNAMP- 59
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
FG RL + I+ +A +V Q+ W
Sbjct: 60 -----------AFGGRLSEAQIENVAAYVLDQSSNKWA 86
>gi|427704531|ref|YP_007047753.1| cytochrome c, mono- and diheme variants family [Cyanobium gracile
PCC 6307]
gi|427347699|gb|AFY30412.1| cytochrome c, mono- and diheme variants family [Cyanobium gracile
PCC 6307]
Length = 145
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 63 SLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGK 122
S+ Q ++ G SLF+ C GCH GGN+I+ G TL L L+RNGV + D I + G
Sbjct: 53 SVLQVSVLEAGGSLFQAHCAGCHLQGGNIIRRGKTLKLGALERNGVASPDAIAAIAAGGT 112
Query: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
G+M G+ + L + + +A +V QA GWP+
Sbjct: 113 GQMGGYAQS------------LGEGGPEAVAAWVWQQALDGWPR 144
>gi|428222493|ref|YP_007106663.1| cytochrome c, mono- and diheme variants family [Synechococcus sp.
PCC 7502]
gi|427995833|gb|AFY74528.1| cytochrome c, mono- and diheme variants family [Synechococcus sp.
PCC 7502]
Length = 100
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 16/112 (14%)
Query: 55 LGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEI 114
LGF A + VD++ G +F+ C CH G N + TL L++ G+ + D I
Sbjct: 4 LGFSQPAFA----VDLESGAKIFKANCAACHALGRNNVVAAKTLKKDALEQYGMYSVDAI 59
Query: 115 YHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
GK MP FG+K L+ ++I+ +A +V +QAD GW K
Sbjct: 60 ITQVTKGKNAMPAFGKK------------LKADEIENVANYVLAQADAGWKK 99
>gi|427717979|ref|YP_007065973.1| Cytochrome c6 [Calothrix sp. PCC 7507]
gi|427350415|gb|AFY33139.1| Cytochrome c6 [Calothrix sp. PCC 7507]
Length = 111
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 47 NVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN 106
+V+ L V++ F A S A D G +F C CH GG N++ TL DL +
Sbjct: 6 SVILLAVAV-FTFAFSSPALAADPVSGAKVFSANCAQCHAGGKNLVNAAKTLKKSDLVKY 64
Query: 107 GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+DT + I GKG MP F + P Q ED+ A +V +AD+ W
Sbjct: 65 GLDTPEAIIAQVTKGKGAMPAFKGRLKPG---------QIEDV---AAYVLDKADKNW 110
>gi|409993527|ref|ZP_11276665.1| cytochrome c6 [Arthrospira platensis str. Paraca]
gi|291571410|dbj|BAI93682.1| cytochrome c6 [Arthrospira platensis NIES-39]
gi|409935610|gb|EKN77136.1| cytochrome c6 [Arthrospira platensis str. Paraca]
Length = 114
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 18/101 (17%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTY---FGKG 123
D+ G S+F C CH GG NVI TL DL + G D +D + V Y GK
Sbjct: 27 DVAAGASVFSANCAACHMGGRNVIVANKTLSKSDLAKYLKGFD-DDAVAAVAYQVTNGKN 85
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MPGF + +P+ Q ED+ A +V QA++GW
Sbjct: 86 AMPGFNGRLSPK---------QIEDV---AAYVVDQAEKGW 114
>gi|427709271|ref|YP_007051648.1| Cytochrome c6 [Nostoc sp. PCC 7107]
gi|427361776|gb|AFY44498.1| Cytochrome c6 [Nostoc sp. PCC 7107]
Length = 111
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 47 NVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN 106
+V+ L +++ F A S A D G +F C CH GG N++ TL +DL++
Sbjct: 6 SVMLLGIAI-FTFAFSSPALAADTVNGAKVFSANCASCHAGGKNLVNAQKTLKKEDLEKY 64
Query: 107 GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+++ + I GK MP F RL+ I+ +A +V QAD+ W
Sbjct: 65 GMNSAEAIIAQVTKGKNAMPA------------FTGRLKSNQIEDVAAYVLGQADKAW 110
>gi|443314350|ref|ZP_21043916.1| cytochrome c553 [Leptolyngbya sp. PCC 6406]
gi|442786042|gb|ELR95816.1| cytochrome c553 [Leptolyngbya sp. PCC 6406]
Length = 113
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 62 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFG 121
+S A D G +F +C CH GGGNV+ TL ++ L + + + + I G
Sbjct: 23 ISPAIAADTAHGAQVFASSCAACHIGGGNVVNGAKTLKIEALNQYEMASIEAIKIQVTKG 82
Query: 122 KGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
K MP F G RL ++DI+ +A +V +QA+QGW
Sbjct: 83 KNAMPAF-----------LG-RLTEQDIEDVAAYVLAQAEQGW 113
>gi|124025340|ref|YP_001014456.1| hypothetical protein NATL1_06291 [Prochlorococcus marinus str.
NATL1A]
gi|123960408|gb|ABM75191.1| Hypothetical protein NATL1_06291 [Prochlorococcus marinus str.
NATL1A]
Length = 123
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 66 QTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRM 125
++ G +LF C GCH GGN+I+ L + L+RNG+D + I ++ G G M
Sbjct: 34 NAIEADSGKNLFNHNCAGCHINGGNIIRRSKNLKISSLKRNGIDNPEAIANIARQGVGIM 93
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+ ++ L D +++A +V QA + W
Sbjct: 94 SGYEDE------------LGDNGDQIVANWVWEQAQKAW 120
>gi|434398104|ref|YP_007132108.1| Cytochrome c6 [Stanieria cyanosphaera PCC 7437]
gi|428269201|gb|AFZ35142.1| Cytochrome c6 [Stanieria cyanosphaera PCC 7437]
Length = 110
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D G +F C CH GG N++ TL L++ G+ + + + GK MP
Sbjct: 27 DAGNGAKIFNANCAACHSGGNNLVNATKTLKKDALEKYGMYSAEAVIAQVTNGKNAMP-- 84
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+F RL D+ I+ +A +V SQAD+GW
Sbjct: 85 ----------SFKGRLNDQQIEDVAAYVISQADKGW 110
>gi|428204088|ref|YP_007082677.1| cytochrome c, mono- and diheme variants family [Pleurocapsa sp. PCC
7327]
gi|427981520|gb|AFY79120.1| cytochrome c, mono- and diheme variants family [Pleurocapsa sp. PCC
7327]
Length = 98
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A +D G +F C GCH GGN+++ TL +K LQRN +D+ + I + GK
Sbjct: 9 AIALDTLNGAKIFNVNCAGCHLNGGNIVRRNKTLKIKALQRNKMDSLEAIQDIVTNGKNN 68
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
M + + RL ++I+ +A +V +A W
Sbjct: 69 MSAYRD------------RLTKQEIEDVAAYVMGRAKNDW 96
>gi|113954538|ref|YP_730946.1| cytochrome C, class IC:cytochrome C, class I [Synechococcus sp.
CC9311]
gi|113881889|gb|ABI46847.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp.
CC9311]
Length = 128
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 63 SLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTED----EIYHVT 118
S A D+ G +F C CH GGGNV+ TL DL+ D D I H
Sbjct: 34 SFALAADVAHGEQVFSANCAACHMGGGNVVNGQRTLKQDDLKAYLSDYNDGHESAIAHQV 93
Query: 119 YFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
GK MP FG K L +DI +A +V+SQ+ +GW
Sbjct: 94 TNGKNGMPAFGSK------------LGSDDISDVAAYVESQSVKGWA 128
>gi|119509987|ref|ZP_01629128.1| Cytochrome c, class I [Nodularia spumigena CCY9414]
gi|119512941|ref|ZP_01632003.1| Cytochrome c, class I [Nodularia spumigena CCY9414]
gi|119462394|gb|EAW43369.1| Cytochrome c, class I [Nodularia spumigena CCY9414]
gi|119465311|gb|EAW46207.1| Cytochrome c, class I [Nodularia spumigena CCY9414]
Length = 110
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 47 NVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN 106
++L L +++ F A S A D G +F C CH GG N++Q TL L++
Sbjct: 6 SLLLLGITI-FTFAFSSPALAADTVNGAKIFGANCAACHAGGRNLVQAQKTLKKDALEKY 64
Query: 107 GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+ + + I GK MP F RL+ E I+ +A +V QAD+GW
Sbjct: 65 GLYSAEAIISQVTKGKNAMP------------AFKGRLKSEQIENVAAYVLEQADKGW 110
>gi|411117395|ref|ZP_11389882.1| cytochrome c, mono- and diheme variants family [Oscillatoriales
cyanobacterium JSC-12]
gi|410713498|gb|EKQ70999.1| cytochrome c, mono- and diheme variants family [Oscillatoriales
cyanobacterium JSC-12]
Length = 116
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A + G +F C CH G NVI +L L + +DT D I + GK
Sbjct: 27 ASAAVLANGAKVFSANCAACHANGNNVINASKSLKADALHQYSMDTLDAIVNQVTNGKSA 86
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MP F RL D+ I+ +A++V Q+ +GW
Sbjct: 87 MPAFKN------------RLSDDQIQAVAEYVLDQSAKGW 114
>gi|334119047|ref|ZP_08493134.1| Cytochrome c6 [Microcoleus vaginatus FGP-2]
gi|333458518|gb|EGK87135.1| Cytochrome c6 [Microcoleus vaginatus FGP-2]
Length = 112
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D G +F C CH GGGNV+ TL + L++ G+++ + I GK MP F
Sbjct: 27 DAANGAKIFSSNCAACHIGGGNVVMAMKTLKKEALEKYGMNSLEAITTQVAKGKNAMPAF 86
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G K P+ Q ED+ A +V SQ+++ W
Sbjct: 87 GAKLKPQ---------QIEDV---ATYVLSQSEKDW 110
>gi|428297768|ref|YP_007136074.1| Cytochrome c6 [Calothrix sp. PCC 6303]
gi|428234312|gb|AFZ00102.1| Cytochrome c6 [Calothrix sp. PCC 6303]
Length = 110
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 47 NVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN 106
+VL L +++ F A + D G +F C CH GG N++ TL +DL++
Sbjct: 6 SVLLLGITI--FTFAFNRPALADATLGAKVFSANCAQCHAGGKNLVNAAKTLKKEDLEKY 63
Query: 107 GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ + + I GKG MP FG RL I+ +A +V QAD+GW
Sbjct: 64 SMYSAEAIITQVTKGKGAMPA------------FGGRLNATQIEDVASYVLEQADKGW 109
>gi|27530924|dbj|BAC54097.1| precursor cytochrome c6 [Phaeodactylum tricornutum]
gi|28565373|gb|AAO43197.1| cytochrome c6 precursor [Phaeodactylum tricornutum]
Length = 133
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGKGRMP 126
D+ G +F C CH GG NVI P TL + L + G TE I GK MP
Sbjct: 47 DVGAGEQIFNANCAACHAGGQNVIMPEKTLEKEALDQYLAGGRTEKSIISQVTGGKNAMP 106
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL DE+I +A +V + A+ GW
Sbjct: 107 ------------AFGGRLSDEEIANVAAYVLASAEAGW 132
>gi|113954892|ref|YP_731094.1| cytochrome C6 (soluble cytochrome F) (cytochrome C553)
[Synechococcus sp. CC9311]
gi|113882243|gb|ABI47201.1| possible cytochrome C6 (soluble cytochrome F) (cytochrome c553)
[Synechococcus sp. CC9311]
Length = 144
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 17/124 (13%)
Query: 48 VLCLPVSL-GFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN 106
+LC+ ++L G A+ + + + D+ G LF C CH GGGNVI TL DLQ +
Sbjct: 33 ILCISLNLLGVSPASAASSPSGDLDHGGQLFSANCAACHMGGGNVISASRTLSQSDLQAH 92
Query: 107 ----GVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQ 162
G D + I H GK MP +F +L ++DI +A +V+ +A++
Sbjct: 93 LNEYGDDHLEAIEHQIEKGKNAMP------------SFVGKLSEQDILDVAAYVELKAEK 140
Query: 163 GWPK 166
GW +
Sbjct: 141 GWQR 144
>gi|72381850|ref|YP_291205.1| cytochrome c [Prochlorococcus marinus str. NATL2A]
gi|72001700|gb|AAZ57502.1| cytochrome c [Prochlorococcus marinus str. NATL2A]
Length = 123
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 66 QTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRM 125
++ G +LF C GCH GGN+I+ L + L+RNG+D + I + G G M
Sbjct: 34 NAIEADSGRTLFNHNCAGCHINGGNIIRRSKNLKISSLKRNGIDNPEAIAKIARQGVGIM 93
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+ ++ L D +++A +V QA + W
Sbjct: 94 SGYEDE------------LGDNGDQIVANWVWEQAQKAW 120
>gi|87124027|ref|ZP_01079877.1| possible cytochrome c6 [Synechococcus sp. RS9917]
gi|86168596|gb|EAQ69853.1| possible cytochrome c6 [Synechococcus sp. RS9917]
Length = 133
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 24/105 (22%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGV--------DTEDEIYHVTY 119
+++ G +F C CH GGGNVI+ TL DLQ + ED++ H
Sbjct: 43 ANLENGSQVFSAQCAACHMGGGNVIRASRTLCQSDLQAHLAAYRSDHLEAIEDQVEH--- 99
Query: 120 FGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GK MP F K L + DI +A FV+ QA++GW
Sbjct: 100 -GKNAMPAFASK------------LSERDIADVAAFVEEQAERGW 131
>gi|352094654|ref|ZP_08955825.1| cytochrome c, class IC:cytochrome c, class I [Synechococcus sp. WH
8016]
gi|351680994|gb|EHA64126.1| cytochrome c, class IC:cytochrome c, class I [Synechococcus sp. WH
8016]
Length = 108
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
++ G SLF+ C CH G N+I+ G TL +K L + G+D+ + I V G G+M G+
Sbjct: 23 MESGASLFQNNCASCHPNGENIIRRGRTLKIKALTKRGIDSSEAIAQVAREGIGQMSGYA 82
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ L D ++A++V QA W
Sbjct: 83 DA------------LGDGGDVIVAEWVWQQAQNAW 105
>gi|15825753|pdb|1F1F|A Chain A, Crystal Structure Of Cytochrome C6 From Arthrospira Maxima
Length = 89
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 18/101 (17%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTY---FGKG 123
D+ G S+F C CH GG NVI TL DL + G D +D + V Y GK
Sbjct: 2 DVAAGASVFSANCAACHMGGRNVIVANKTLSKSDLAKYLKGFD-DDAVAAVAYQVTNGKN 60
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MPGF + +P LQ ED+ A +V QA++GW
Sbjct: 61 AMPGFNGRLSP---------LQIEDV---AAYVVDQAEKGW 89
>gi|427729630|ref|YP_007075867.1| cytochrome c, mono- and diheme variants family [Nostoc sp. PCC
7524]
gi|427365549|gb|AFY48270.1| cytochrome c, mono- and diheme variants family [Nostoc sp. PCC
7524]
Length = 110
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Query: 46 YNVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR 105
+++L L +++ F A + A D G +F C CH GG N++Q TL L++
Sbjct: 5 FSLLLLGITI-FTFAFSNPALAADSASGAKVFSANCAACHAGGKNLVQANKTLKKDALEQ 63
Query: 106 NGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+ + D I GK MP F +G RL + I+ +A +V QAD+GW
Sbjct: 64 FGMYSADAIIAQVTNGKNAMPAF------KG------RLTSDQIEDVAAYVLEQADKGW 110
>gi|67921532|ref|ZP_00515050.1| Cytochrome c, class I [Crocosphaera watsonii WH 8501]
gi|67856644|gb|EAM51885.1| Cytochrome c, class I [Crocosphaera watsonii WH 8501]
Length = 99
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 14/110 (12%)
Query: 55 LGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEI 114
L F+ + ++AQ DI G +F C GCH G N+I+ G L LK L++N VDT D I
Sbjct: 2 LLIFYPSSAIAQ--DISDGSKIFTIHCAGCHPNGKNIIRRGKNLKLKALKKNKVDTLDSI 59
Query: 115 YHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
++ +GK M + E RL +IK ++Q++ +A W
Sbjct: 60 MNLVSYGKNNMSAYEE------------RLTQNEIKAVSQYILDKAQNNW 97
>gi|443312008|ref|ZP_21041629.1| cytochrome c, mono- and diheme variants family [Synechocystis sp.
PCC 7509]
gi|442777889|gb|ELR88161.1| cytochrome c, mono- and diheme variants family [Synechocystis sp.
PCC 7509]
Length = 110
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 75 SLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTP 134
+LF C GCH GGN+++ G +L K L++ G+D+ D I + GK MP
Sbjct: 32 TLFTNNCAGCHINGGNIVRRGKSLKTKALKKFGMDSTDAIAQLVKNGKYAMPA------- 84
Query: 135 RGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ RL D+ I ++ +V QA+ W
Sbjct: 85 -----YKGRLTDQQILDVSAYVLEQAEHDW 109
>gi|87124011|ref|ZP_01079861.1| cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. RS9917]
gi|86168580|gb|EAQ69837.1| cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. RS9917]
Length = 112
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 40 LQKYDTYNVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLF 99
+ + + L L V++ A+ A D G LF C GCH GGN+I+ G TL
Sbjct: 1 MARINRIGALILAVAIWLLSPALP-ASAAD---GEQLFNNHCAGCHPHGGNIIRRGRTLK 56
Query: 100 LKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQ 159
L+ L++ ++ D I + G G+M G+ E P G + +A+++ Q
Sbjct: 57 LRALEQRQLNNPDAIARIAREGIGQMGGYAEVLGPNGD------------QRVAEWIWDQ 104
Query: 160 ADQGW 164
A + W
Sbjct: 105 AQKAW 109
>gi|397634886|gb|EJK71624.1| cytochrome c6 isoform A [Thalassiosira oceanica]
Length = 142
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 14/102 (13%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGK 122
A D+ +G +F C CH GG NVI P TL L++ +G +E + +GK
Sbjct: 52 ASAGDVARGQQIFNMNCAACHAGGQNVIMPEKTLEKDALEKYLSGGRSEASVVTQVTYGK 111
Query: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MP FG RL D +I +A +V ++ GW
Sbjct: 112 AAMP------------AFGGRLTDSEISDVASYVIQTSENGW 141
>gi|116070844|ref|ZP_01468113.1| possible cytochrome c6 [Synechococcus sp. BL107]
gi|116066249|gb|EAU72006.1| possible cytochrome c6 [Synechococcus sp. BL107]
Length = 117
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 64 LAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN----GVDTEDEIYHVTY 119
LA +++G +F Q C CH GGGNVI+ TL ++DL + D + I H
Sbjct: 25 LAFDSAVEQGEQIFSQNCAACHMGGGNVIRASRTLNIRDLNAHLEEYPQDPLEAIEHQIE 84
Query: 120 FGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GK MP ++ +L + +I +A +V+ QA+ GW
Sbjct: 85 DGKNAMP------------SYAGKLSESEIIAVATYVEQQAEMGW 117
>gi|124023458|ref|YP_001017765.1| cytochrome C, class IC:cytochrome C, class I [Prochlorococcus
marinus str. MIT 9303]
gi|123963744|gb|ABM78500.1| Cytochrome c, class IC:Cytochrome c, class I [Prochlorococcus
marinus str. MIT 9303]
Length = 115
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 16/109 (14%)
Query: 60 AAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL----FLKDLQRNGVDTEDEIY 115
AA S D G +F C CH GGGN++ P TL L G E+ I
Sbjct: 19 AAPSWVMAADSAHGGQVFSSTCAACHAGGGNIVDPAKTLQKAALEATLSNYGSGHEEAIV 78
Query: 116 HVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GKG MP F + L DI +A +V++QA GW
Sbjct: 79 AQVTNGKGGMPSFAD------------VLSAADIADVAAYVEAQASSGW 115
>gi|33862782|ref|NP_894342.1| cytochrome c, class IC:cytochrome c, class I [Prochlorococcus
marinus str. MIT 9313]
gi|33634698|emb|CAE20684.1| Cytochrome c, class IC:Cytochrome c, class I [Prochlorococcus
marinus str. MIT 9313]
Length = 112
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 16/109 (14%)
Query: 60 AAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL----FLKDLQRNGVDTEDEIY 115
AA S D G +F C CH GGGN++ P TL L G E+ I
Sbjct: 16 AAPSWVMAADSAHGGQVFSSTCAACHAGGGNIVDPAKTLQKAALEATLSNYGSGHEEAIV 75
Query: 116 HVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GKG MP F + L DI +A +V++QA GW
Sbjct: 76 AQVTNGKGGMPSFAD------------VLSAADIADVAAYVEAQASSGW 112
>gi|300863711|ref|ZP_07108643.1| Cytochrome c6 [Oscillatoria sp. PCC 6506]
gi|300338279|emb|CBN53789.1| Cytochrome c6 [Oscillatoria sp. PCC 6506]
Length = 113
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 54 SLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDE 113
+LGF A++ +I G +F C CH GGGNV+ TL + L++ +++ +
Sbjct: 16 TLGFGRPALAEG---NIANGAKVFAANCAACHIGGGNVVMAQRTLKKEALEKFAMNSLEA 72
Query: 114 IYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
I GK MP F RL D+ I+ +A +V SQA++GW
Sbjct: 73 ITAQVTNGKNAMP------------KFKGRLSDQQIEDVATYVLSQAEKGW 111
>gi|225698031|pdb|3DMI|A Chain A, Crystallization And Structural Analysis Of Cytochrome C6
From The Diatom Phaeodactylum Tricornutum At 1.5 A
Resolution
Length = 88
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGKGRMP 126
D+ G +F C CH GG NVI P TL + L + G TE I GK MP
Sbjct: 2 DVGAGEQIFNANCAACHAGGQNVIMPEKTLEKEALDQYLAGGRTEKSIISQVTGGKNAMP 61
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL DE+I +A +V + A+ GW
Sbjct: 62 ------------AFGGRLSDEEIANVAAYVLASAEAGW 87
>gi|428307750|ref|YP_007144575.1| Cytochrome c6 [Crinalium epipsammum PCC 9333]
gi|428249285|gb|AFZ15065.1| Cytochrome c6 [Crinalium epipsammum PCC 9333]
Length = 111
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D G +F C CH GG NVI L + L++ G+++ + I GK MP
Sbjct: 28 DAASGAKIFSANCAACHAGGNNVIMANKNLKKETLEKYGMNSLEAIVKQVTKGKNAMP-- 85
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
F RL D+ I+ +A +V Q+++GW
Sbjct: 86 ----------AFAGRLNDQQIQDVATYVLGQSEKGW 111
>gi|78184490|ref|YP_376925.1| cytochrome c6 [Synechococcus sp. CC9902]
gi|78168784|gb|ABB25881.1| possible cytochrome c6 [Synechococcus sp. CC9902]
Length = 124
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 64 LAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGV----DTEDEIYHVTY 119
LA +++G +F Q C CH GGGNVI+ TL ++DL + D + I H
Sbjct: 32 LAFDSPLEQGEQIFSQNCAACHMGGGNVIRASRTLNIRDLNAHLTEYPQDPLEAIEHQIE 91
Query: 120 FGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GK MP ++ +L + +I +A +V+ QA+ GW
Sbjct: 92 DGKNAMP------------SYAGKLSESEIVAVATYVEQQAEMGW 124
>gi|427723653|ref|YP_007070930.1| cytochrome c class I [Leptolyngbya sp. PCC 7376]
gi|427355373|gb|AFY38096.1| cytochrome c class I [Leptolyngbya sp. PCC 7376]
Length = 115
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 62 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFG 121
++ A + ++ G +F C GCH GGN+I+ G L + +++ G + + I + G
Sbjct: 23 IAPAFSAELPDGAQVFESTCAGCHVNGGNIIRRGKNLKQRAMEKYGFTSVENITEIINNG 82
Query: 122 KGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
KG M +G+ RL E+ + ++++V +Q+ + W
Sbjct: 83 KGSMSAYGD------------RLTAEETQAVSEYVLTQSQKNW 113
>gi|224006027|ref|XP_002291974.1| hypothetical protein THAPSDRAFT_35934 [Thalassiosira pseudonana
CCMP1335]
gi|220972493|gb|EED90825.1| hypothetical protein THAPSDRAFT_35934 [Thalassiosira pseudonana
CCMP1335]
Length = 133
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGKGRMP 126
D+ G +F C CH GG NVI P TL + L++ G E + GK MP
Sbjct: 47 DVGAGEQIFNANCAACHAGGQNVIMPDKTLEKEALEQYLAGGRNEKAVMTQVTNGKNAMP 106
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL DEDI +A +V + ++ GW
Sbjct: 107 ------------AFGGRLSDEDIANVASYVIATSEAGW 132
>gi|117932|sp|P00118.1|CYC6_SPIMA RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
gi|21730475|pdb|1KIB|A Chain A, Cytochrome C6 From Arthrospira Maxima: An Assembly Of 24
Subunits In The Form Of An Oblate Shell
gi|21730476|pdb|1KIB|B Chain B, Cytochrome C6 From Arthrospira Maxima: An Assembly Of 24
Subunits In The Form Of An Oblate Shell
gi|21730477|pdb|1KIB|C Chain C, Cytochrome C6 From Arthrospira Maxima: An Assembly Of 24
Subunits In The Form Of An Oblate Shell
gi|21730478|pdb|1KIB|D Chain D, Cytochrome C6 From Arthrospira Maxima: An Assembly Of 24
Subunits In The Form Of An Oblate Shell
gi|21730479|pdb|1KIB|E Chain E, Cytochrome C6 From Arthrospira Maxima: An Assembly Of 24
Subunits In The Form Of An Oblate Shell
gi|21730480|pdb|1KIB|F Chain F, Cytochrome C6 From Arthrospira Maxima: An Assembly Of 24
Subunits In The Form Of An Oblate Shell
gi|21730481|pdb|1KIB|G Chain G, Cytochrome C6 From Arthrospira Maxima: An Assembly Of 24
Subunits In The Form Of An Oblate Shell
gi|21730482|pdb|1KIB|H Chain H, Cytochrome C6 From Arthrospira Maxima: An Assembly Of 24
Subunits In The Form Of An Oblate Shell
gi|229508|prf||750601A cytochrome f
Length = 89
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 18/101 (17%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTY---FGKG 123
D+ G S+F C CH GG NVI TL DL + G D +D + V Y GK
Sbjct: 2 DVAAGASVFSANCAACHMGGRNVIVANKTLSKSDLAKYLKGFD-DDAVAAVAYQVTNGKN 60
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MPGF + +P+ Q ED+ A +V QA++GW
Sbjct: 61 AMPGFNGRLSPK---------QIEDV---AAYVVDQAEKGW 89
>gi|282899732|ref|ZP_06307695.1| Cytochrome c, class I [Cylindrospermopsis raciborskii CS-505]
gi|281195347|gb|EFA70281.1| Cytochrome c, class I [Cylindrospermopsis raciborskii CS-505]
Length = 112
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 75 SLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTP 134
S+F+ C CH GG N++ TL + L++ + +++ I GKG MP FG+
Sbjct: 33 SVFKANCAQCHLGGKNLVNAAKTLKKEALEKYDMYSQEAIITQVTKGKGAMPAFGK---- 88
Query: 135 RGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
RL+ I+ +A +V QAD+GW K
Sbjct: 89 --------RLKPAQIENVAAYVLEQADKGWKK 112
>gi|434404638|ref|YP_007147523.1| cytochrome c, mono- and diheme variants family [Cylindrospermum
stagnale PCC 7417]
gi|428258893|gb|AFZ24843.1| cytochrome c, mono- and diheme variants family [Cylindrospermum
stagnale PCC 7417]
Length = 112
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
+F C CH GG N++ +L DL++ G+ + + I GKG MP
Sbjct: 34 VFSANCAQCHAGGRNLVNAAKSLKKADLEKYGLYSAEAIIAQVTKGKGAMP--------- 84
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
FGARL+ I+ +A +V +QAD+ W K
Sbjct: 85 ---AFGARLKANQIEDVAAYVLAQADKDWKK 112
>gi|113478003|ref|YP_724064.1| cytochrome c, class I [Trichodesmium erythraeum IMS101]
gi|110169051|gb|ABG53591.1| cytochrome c, class I [Trichodesmium erythraeum IMS101]
Length = 111
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
+I +G +F+ C GCH GGN+++ L ++ L+RN +D+ + I ++ GK M +
Sbjct: 27 EITQGAEVFQIHCAGCHAKGGNIVKWWKNLKIRTLKRNKLDSVEAIAYLVKNGKNNMSAY 86
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ RL + +I+ ++ +V QA+ W
Sbjct: 87 KD------------RLTEIEIQTVSAYVLKQAENRW 110
>gi|434392163|ref|YP_007127110.1| Cytochrome c6 [Gloeocapsa sp. PCC 7428]
gi|428264004|gb|AFZ29950.1| Cytochrome c6 [Gloeocapsa sp. PCC 7428]
Length = 111
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 40 LQKYDTYNVLCLPV-SLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL 98
++K T +L L + SL F ++ D G +F C CH GG NV+ TL
Sbjct: 1 MKKILTAILLSLAIASLAFVRPVLA----ADTASGAKIFSTNCAACHMGGRNVVVAQKTL 56
Query: 99 FLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKS 158
L++ +++ + I H GK MP F +G RL D+ I+ +A +V
Sbjct: 57 KQDALEKYSMNSIEAIIHQVQNGKNAMPAF------KG------RLSDQQIEDVAAYVLE 104
Query: 159 QADQGW 164
QA +GW
Sbjct: 105 QAAKGW 110
>gi|440682515|ref|YP_007157310.1| cytochrome c class I [Anabaena cylindrica PCC 7122]
gi|428679634|gb|AFZ58400.1| cytochrome c class I [Anabaena cylindrica PCC 7122]
Length = 111
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A VD G +F C GCH GGN+I+ G L L++ G+D+ + I ++ GK
Sbjct: 23 ASAVDTTNGTGIFSVHCAGCHINGGNIIRRGKNLKKNALKKYGMDSLEAITNIVTNGKNN 82
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
M + + RL E+I+ +A +V QA++ W
Sbjct: 83 MSAYQD------------RLTTEEIQTVAAYVLEQAEKDW 110
>gi|334120542|ref|ZP_08494622.1| cytochrome c class I [Microcoleus vaginatus FGP-2]
gi|333456520|gb|EGK85152.1| cytochrome c class I [Microcoleus vaginatus FGP-2]
Length = 123
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 51 LPVSLGFFHAA----VSLAQTV-DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR 105
L ++L F A ++LA T + +F C GCH G N+I+ G L K L++
Sbjct: 16 LILTLAFVEIATNSQIALADTATNPTTAAEVFSANCAGCHINGSNIIRRGKNLKQKALKK 75
Query: 106 NGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+D+ I ++ GKG MP + + RL ++ I ++ +V SQA+ W
Sbjct: 76 YGMDSIANISNLVINGKGIMPAYKD------------RLSEQQIIDVSAYVLSQAETDW 122
>gi|219113109|ref|XP_002186138.1| cytochrome c6, cytochrome c553 [Phaeodactylum tricornutum CCAP
1055/1]
gi|209582988|gb|ACI65608.1| cytochrome c6, cytochrome c553 [Phaeodactylum tricornutum CCAP
1055/1]
Length = 133
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGKGRMP 126
D+ G +F C CH GG NVI P TL + L + G +E I GK MP
Sbjct: 47 DVGAGEQIFNANCAACHAGGQNVIMPEKTLEKEALDQYLAGGRSEKAIISQVTGGKNAMP 106
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL DE+I +A +V + A+ GW
Sbjct: 107 ------------AFGGRLSDEEIANVAAYVLASAEAGW 132
>gi|376006189|ref|ZP_09783509.1| Cytochrome c6-like (fragment) [Arthrospira sp. PCC 8005]
gi|375325432|emb|CCE19262.1| Cytochrome c6-like (fragment) [Arthrospira sp. PCC 8005]
Length = 72
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 82 IGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFG 141
+GCH GGGN+I+ G L + LQRNG D+ + I + GK M + +
Sbjct: 1 MGCHAGGGNIIRRGKNLKQRALQRNGYDSIEAIAEIVANGKSNMSAYSD----------- 49
Query: 142 ARLQDEDIKLLAQFVKSQADQGW 164
RL +I+ +A +V QA++ W
Sbjct: 50 -RLSVSEIQQVAAYVLDQAEKNW 71
>gi|86606957|ref|YP_475720.1| cytochrome c6 [Synechococcus sp. JA-3-3Ab]
gi|86555499|gb|ABD00457.1| cytochrome c6 [Synechococcus sp. JA-3-3Ab]
Length = 115
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D+ G +F+ C+GCH G N + L L L VDT + I GKG MP F
Sbjct: 29 DLALGAKVFQAKCVGCHLNGRNTLVAAKNLSLAALHEYHVDTPELIQAQVRNGKGAMPAF 88
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
G+ P E+I+ +A +V +A+ W K
Sbjct: 89 GKLLKP------------EEIEAVAAYVLDRAEHNWSK 114
>gi|218441260|ref|YP_002379589.1| cytochrome C6 [Cyanothece sp. PCC 7424]
gi|226722266|sp|B7K722.1|CYC6_CYAP7 RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|218173988|gb|ACK72721.1| cytochrome c class I [Cyanothece sp. PCC 7424]
Length = 110
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 57 FFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYH 116
F + VS A D G +F C CH GG NV+ TL DL++ + + I
Sbjct: 15 FGFSWVSPAFAGDAGNGSKVFSANCNACHLGGKNVVNAAKTLNKSDLEKYAMLDLEAIKT 74
Query: 117 VTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GKG MP FG++ TP Q ED+ A +V +A++GW
Sbjct: 75 QVTNGKGAMPAFGKRLTPD---------QIEDV---ATYVLEKAEKGW 110
>gi|17231743|ref|NP_488291.1| cytochrome c6 [Nostoc sp. PCC 7120]
gi|61222451|sp|P0A3X7.1|CYC6_ANASP RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|61222453|sp|P0A3X8.1|CYC6_ANASO RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|142014|gb|AAA59365.1| cytochrome a [Nostoc sp. PCC 7120]
gi|2911539|emb|CAA05337.1| cytochrome c6 [Nostoc sp. PCC 7119]
gi|17133386|dbj|BAB75950.1| cytochrome c6 [Nostoc sp. PCC 7120]
Length = 111
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Query: 46 YNVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR 105
++++ L ++L F A S A D G +F C CH GG N++Q TL DL++
Sbjct: 5 FSLVLLGIAL-FTFAFSSPALAADSVNGAKIFSANCASCHAGGKNLVQAQKTLKKADLEK 63
Query: 106 NGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+ + + I GK MP F +G RL+ E I+ +A +V +AD W
Sbjct: 64 YGMYSAEAIIAQVTNGKNAMPAF------KG------RLKPEQIEDVAAYVLGKADADW 110
>gi|172035505|ref|YP_001802006.1| cytochrome c family protein [Cyanothece sp. ATCC 51142]
gi|354555593|ref|ZP_08974894.1| cytochrome c class I [Cyanothece sp. ATCC 51472]
gi|57864843|gb|AAW57018.1| Cytochrome c6 precursor [Cyanothece sp. ATCC 51142]
gi|171696959|gb|ACB49940.1| cytochrome c family protein [Cyanothece sp. ATCC 51142]
gi|353552652|gb|EHC22047.1| cytochrome c class I [Cyanothece sp. ATCC 51472]
Length = 111
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 48/104 (46%), Gaps = 13/104 (12%)
Query: 62 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKD-LQRNGVDTEDEIYHVTYF 120
VS A D G +F C CH GGGNV+ + KD L+ N + +E+ I
Sbjct: 20 VSPALAGDAAAGKGIFTANCASCHMGGGNVVAGASKGLTKDALENNKMLSEEAIIAQVTK 79
Query: 121 GKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GK MP F G RL D I+ +A +V SQA+ GW
Sbjct: 80 GKAAMPAF-----------LG-RLTDTQIEDVAAYVLSQAEAGW 111
>gi|443474399|ref|ZP_21064376.1| Cytochrome c6 [Pseudanabaena biceps PCC 7429]
gi|443020871|gb|ELS34781.1| Cytochrome c6 [Pseudanabaena biceps PCC 7429]
Length = 113
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNG 107
+ L + LG + + A+ QK +F C CH GG N + L L++ G
Sbjct: 9 AIALTMFLGLSFSQPAFAEQTSGQK---VFSSNCASCHAGGTNRVVAAKNLKKDALEKYG 65
Query: 108 VDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
+ + I GKG MP FG+K T +I L+A +V QAD GW K
Sbjct: 66 KYSVEAIVAQVTKGKGAMPAFGKKLTA------------NEINLVANYVIEQADNGWAK 112
>gi|428213225|ref|YP_007086369.1| cytochrome c, mono- and diheme variants family [Oscillatoria
acuminata PCC 6304]
gi|428001606|gb|AFY82449.1| cytochrome c, mono- and diheme variants family [Oscillatoria
acuminata PCC 6304]
Length = 110
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D G +F C CH GG NVI TL L + +++ + I GK MP
Sbjct: 27 DAANGAKIFSANCAACHAGGNNVIMANKTLKKDALDQYAMNSIEAITAQVTKGKNAMPA- 85
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL D I+ +A +V QA++GW
Sbjct: 86 -----------FGGRLSDAQIEDVATYVLEQAEKGW 110
>gi|148239071|ref|YP_001224458.1| cytochrome C6 [Synechococcus sp. WH 7803]
gi|147847610|emb|CAK23161.1| cytochrome C6 [Synechococcus sp. WH 7803]
Length = 110
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGE 130
G LF C GCH GGN+I+ G +L LKDL + G+D + I + G G+M G+G+
Sbjct: 28 GAQLFDLHCAGCHPNGGNIIRRGRSLKLKDLSKRGLDNPEAIAAIAKEGIGQMSGYGD 85
>gi|354565059|ref|ZP_08984235.1| Cytochrome c6 [Fischerella sp. JSC-11]
gi|353550185|gb|EHC19624.1| Cytochrome c6 [Fischerella sp. JSC-11]
Length = 111
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 12/89 (13%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
+F C CH GG N++Q +L DL++ G+++ + I GK MP
Sbjct: 34 VFSANCAACHAGGKNLVQANKSLSKSDLEKYGMNSAEAIIAQVTNGKNAMPA-------- 85
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQGW 164
F ARL+ E I+ +A +V +A++GW
Sbjct: 86 ----FKARLKPEQIEDVAVYVLGEAEKGW 110
>gi|317969673|ref|ZP_07971063.1| cytochrome C6 [Synechococcus sp. CB0205]
Length = 113
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 53/122 (43%), Gaps = 21/122 (17%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQ--- 104
LCL + LG A+ S A D G +F C CH GGGNV+ TL + L+
Sbjct: 9 ALCLALVLG---ASPSFA--ADADHGAQIFSANCAACHMGGGNVVNAERTLKKEALESYL 63
Query: 105 -RNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQG 163
E+ I + GK MP FG K L + DI +A +V+SQ+ G
Sbjct: 64 ANYSAGHEEAIQYQVTNGKNAMPAFGGK------------LSEGDIADVAAYVESQSQNG 111
Query: 164 WP 165
W
Sbjct: 112 WA 113
>gi|254431774|ref|ZP_05045477.1| hypothetical protein CPCC7001_1665 [Cyanobium sp. PCC 7001]
gi|197626227|gb|EDY38786.1| hypothetical protein CPCC7001_1665 [Cyanobium sp. PCC 7001]
Length = 113
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 51/122 (41%), Gaps = 21/122 (17%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL----FLKDL 103
LCL + LG AA S A D+ G LF C CH GGGNV+ TL L
Sbjct: 9 ALCLALVLG---AAPSYA--ADVAHGGQLFSANCAACHMGGGNVVNAERTLKQDALEAYL 63
Query: 104 QRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQG 163
D E I + GK MP FG K L + DI +A +V+ A +G
Sbjct: 64 ANYSSDHEAAIAYQVTNGKNAMPAFGGK------------LSEGDIADVAAYVEDMASKG 111
Query: 164 WP 165
W
Sbjct: 112 WA 113
>gi|428182992|gb|EKX51851.1| hypothetical protein GUITHDRAFT_84887 [Guillardia theta CCMP2712]
Length = 141
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR---NGVDTEDEIYHVTYFGKGRM 125
D+ G +F C CH GG N + P TL +++ G + + I VT GK M
Sbjct: 55 DVDAGEKVFNANCAACHAGGQNSVVPDHTLEKAAIEKFLTGGFNEKAVITQVTN-GKNAM 113
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
P FG RL D+DI +A FV S++++GW
Sbjct: 114 P------------AFGGRLSDDDIANVASFVISKSEEGW 140
>gi|17227657|ref|NP_484205.1| cytochrome c6 [Nostoc sp. PCC 7120]
gi|27734243|sp|Q8Z0D7.1|CYC6L_ANASP RecName: Full=Cytochrome c6-like; Flags: Precursor
gi|17135139|dbj|BAB77685.1| cytochrome c6 [Nostoc sp. PCC 7120]
gi|164513989|emb|CAP16701.1| putative cytochrome c6 [Nostoc sp. PCC 7119]
Length = 111
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A + G +F C GCH G N+I+ G L K L++ G+D+ + I + GK
Sbjct: 23 ANAENTINGEQIFSVHCAGCHINGSNIIRRGKNLQKKTLKKYGMDSLEAIEAIVTNGKNN 82
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
M + + RL +++I+ +A +V QA++GW
Sbjct: 83 MSAYKD------------RLSEQEIQDVAAYVLEQAEKGW 110
>gi|57335963|emb|CAH25383.1| putative cytochrome c6 [Guillardia theta]
Length = 137
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR---NGVDTEDEIYHVTYFGKGRM 125
D+ G +F C CH GG N + P TL +++ G + + I VT GK M
Sbjct: 51 DVDAGEKVFNANCAACHAGGQNSVVPDHTLEKAAIEKFLTGGFNEKAVITQVTN-GKNAM 109
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
P FG RL D+DI +A FV S++++GW
Sbjct: 110 P------------AFGGRLSDDDIANVASFVISKSEEGW 136
>gi|428319640|ref|YP_007117522.1| Cytochrome c6 [Oscillatoria nigro-viridis PCC 7112]
gi|428243320|gb|AFZ09106.1| Cytochrome c6 [Oscillatoria nigro-viridis PCC 7112]
Length = 112
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D G +F C CH GGGNV+ TL + L++ G+++ + I GK MP
Sbjct: 27 DAANGAKIFSANCAACHIGGGNVVMAMKTLKKEALEKYGMNSLEAITTQVTKGKNAMP-- 84
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
F RL+ E I+ +A +V SQ+++ W
Sbjct: 85 ----------AFAGRLKPEQIEDVATYVLSQSEKDW 110
>gi|27530928|dbj|BAC54099.1| precursor cytochrome c6 [Chaetoceros gracilis]
Length = 132
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR---NGVDTEDEIYHVTYFGKGRM 125
D+ G +F C CH GG NVI P TL L++ G + + I VT GK M
Sbjct: 45 DVAAGEQVFNANCAACHAGGQNVIMPEKTLEKDALEQYLAGGRNEKAVITQVTN-GKNAM 103
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
P FG RL D+DI +A +V + ++ GW
Sbjct: 104 P------------AFGGRLSDDDIANVASYVIATSESGW 130
>gi|322812518|pdb|3PH2|B Chain B, Structure Of The Imidazole-Adduct Of The Phormidium
Laminosum Cytochrome C6 Q51v Variant
Length = 86
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D+ G +F C CH GG N++ TL + L++ G+++ I V GK MP F
Sbjct: 3 DLATGAKVFSANCAACHAGGINLVNAEKTLKKEALEKFGMNSIVAITTVVTNGKAGMPAF 62
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+G RL D+ I +A +V QA++GW
Sbjct: 63 ------KG------RLTDDQIAAVAAYVLDQAEKGW 86
>gi|428780703|ref|YP_007172489.1| cytochrome c, mono- and diheme variants family [Dactylococcopsis
salina PCC 8305]
gi|428694982|gb|AFZ51132.1| cytochrome c, mono- and diheme variants family [Dactylococcopsis
salina PCC 8305]
Length = 105
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 16/117 (13%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNG 107
+ L + FF A+ A ++G +F+ C CH G N I TL L R
Sbjct: 5 IASLLIVFSFFIASPVQAS----EEGGKIFQANCAVCHAQGTNRIMVNKTLKKDALARYN 60
Query: 108 VDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+D+++ I H GK MP F RG RL I+ +A++V SQA++GW
Sbjct: 61 MDSKEAIVHQVTNGKRAMPAF------RG------RLNSSQIEAVAEYVLSQAEKGW 105
>gi|428774667|ref|YP_007166455.1| cytochrome c class I [Cyanobacterium stanieri PCC 7202]
gi|428688946|gb|AFZ48806.1| cytochrome c class I [Cyanobacterium stanieri PCC 7202]
Length = 111
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 67 TVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMP 126
D+ +G ++F C CH GG NV+ TL +DL++ + + ++I GK MP
Sbjct: 25 AADVAQGGAIFSANCASCHLGGRNVVNAAKTLQKEDLEKYDMYSLEKIVSQVTNGKAAMP 84
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+F RL + I+ +A +V +QA++GW
Sbjct: 85 ------------SFKGRLDAQQIEDVASYVLAQAEKGW 110
>gi|428318160|ref|YP_007116042.1| cytochrome c class I [Oscillatoria nigro-viridis PCC 7112]
gi|428241840|gb|AFZ07626.1| cytochrome c class I [Oscillatoria nigro-viridis PCC 7112]
Length = 123
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 51 LPVSLGFFHAA----VSLAQTV-DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR 105
L ++L F A +++A T + +F C GCH G N+I+ G L K L++
Sbjct: 16 LILTLAFVEIATNSQIAIADTATNPATAAEVFTANCAGCHINGSNIIRRGKNLKQKALKK 75
Query: 106 NGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+D+ I ++ GKG MP + RL ++ I ++ +V SQA+ W
Sbjct: 76 YGMDSIANISNLVTNGKGIMPAYKN------------RLSEQQIIDVSAYVLSQAETDW 122
>gi|88809552|ref|ZP_01125059.1| cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. WH 7805]
gi|88786302|gb|EAR17462.1| cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. WH 7805]
Length = 115
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 66 QTVDI--QKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKG 123
Q+VD G LF C GCH GGN+I+ G +L LKDL + G+D + I + G G
Sbjct: 24 QSVDALAPDGEQLFDLHCAGCHPNGGNIIRRGRSLKLKDLSKRGLDNPEAIAAIAREGIG 83
Query: 124 RMPGFGE 130
+M G+G
Sbjct: 84 QMSGYGH 90
>gi|318041193|ref|ZP_07973149.1| cytochrome C6 [Synechococcus sp. CB0101]
Length = 113
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 53/123 (43%), Gaps = 23/123 (18%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKD----- 102
LCL + LG AA S A D G +F C CH GGGNV+ TL KD
Sbjct: 9 ALCLALVLG---AAPSFA--ADADHGAQVFSANCAACHMGGGNVVNAERTL-KKDALEAY 62
Query: 103 LQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQ 162
L E+ I + GK MP FG K L +DI +A +V+S + +
Sbjct: 63 LANYSAGHEEAIQYQVTNGKNAMPAFGGK------------LSADDIADVAAYVESMSQK 110
Query: 163 GWP 165
GW
Sbjct: 111 GWA 113
>gi|428777768|ref|YP_007169555.1| cytochrome c class I [Halothece sp. PCC 7418]
gi|428692047|gb|AFZ45341.1| cytochrome c class I [Halothece sp. PCC 7418]
Length = 151
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 66 QTVDIQKGVSLF--RQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKG 123
+ D++ G +F + C CH GG N + L L++ +D+ + I H GK
Sbjct: 60 EAADLENGKQVFMAKANCTQCHRGGINTVIADKHLGKDALEKYNMDSMEAIAHQVRNGKN 119
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MP +G RL +E I+ +A +V SQA++GW
Sbjct: 120 AMPAYGR------------RLSEEQIRDVAAYVLSQAEKGW 148
>gi|75908956|ref|YP_323252.1| cytochrome c, class I [Anabaena variabilis ATCC 29413]
gi|75702681|gb|ABA22357.1| Cytochrome c, class I [Anabaena variabilis ATCC 29413]
Length = 121
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 62 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL-------FLKDLQRNGVDTEDEI 114
+S A ++ G +F C CH GGGN++ TL +L+D + N + I
Sbjct: 20 ISPALAAELPTGAKIFNNNCASCHIGGGNILISEKTLKKEALLKYLEDYETNSIQA---I 76
Query: 115 YHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIE 168
H +GK MP F +K L E+I +A ++ +A++ W +E
Sbjct: 77 IHQVQYGKNAMPAFKDK------------LSTEEILEVAAYIFQKAEKDWSNLE 118
>gi|260435173|ref|ZP_05789143.1| cytochrome C6 [Synechococcus sp. WH 8109]
gi|260413047|gb|EEX06343.1| cytochrome C6 [Synechococcus sp. WH 8109]
Length = 125
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 16/110 (14%)
Query: 61 AVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTE----DEIYH 116
A+ ++ +++G +F C CH GGGNVI TL + DL + V + + H
Sbjct: 27 AIDTIESSALERGEQIFNSNCAACHMGGGNVISANRTLKISDLNDHVVAYSSSPLEALEH 86
Query: 117 VTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
G MP + +K L +E+I +A +V+ +A+ GW +
Sbjct: 87 EIEDGLNAMPSYADK------------LSEEEIMAVATYVEQRAELGWSR 124
>gi|332710256|ref|ZP_08430205.1| cytochrome c [Moorea producens 3L]
gi|332350947|gb|EGJ30538.1| cytochrome c [Moorea producens 3L]
Length = 111
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 53 VSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTED 112
++L F +A++ D KG +F C CH GG N + P L + L++ G+ +
Sbjct: 15 ITLSFPDSALAAG---DAAKGKMVFNANCNACHQGGVNRVIPMKNLKKEALEKFGMYSAA 71
Query: 113 EIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
I GKG MP FG RL+ + I+ +A +V QAD+GW
Sbjct: 72 AIIKQVTNGKGAMP------------RFGGRLKPDQIEDVAAYVLQQADKGW 111
>gi|86608986|ref|YP_477748.1| cytochrome c6 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557528|gb|ABD02485.1| cytochrome c6 [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 113
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D+ G +F+ C+GCH G N + L L L VDT + I GKG MP F
Sbjct: 27 DLALGAKVFQAKCVGCHLNGRNTLVAAKNLSLAALHEYHVDTPELIQAQVRNGKGAMPAF 86
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
+ P E+I+ +A +V +A+ W +
Sbjct: 87 AKILKP------------EEIEAVAAYVLDRAEHNWSR 112
>gi|117930|sp|P00117.1|CYC6_PLEBO RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
Length = 85
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 41/97 (42%), Gaps = 12/97 (12%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
D G +F C CH GG I TL L NG DT + I GKG MP
Sbjct: 1 ADAAAGGKVFNANCAACHASGGGQINGAKTLKKNALTANGKDTVEAIVAQVTNGKGAMP- 59
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
F RL D+ I+ +A +V +A++GW
Sbjct: 60 -----------AFKGRLSDDQIQSVALYVLDKAEKGW 85
>gi|87302566|ref|ZP_01085383.1| cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. WH 5701]
gi|87282910|gb|EAQ74867.1| cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. WH 5701]
Length = 131
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G SLF C GCH GGN+++ G TL LK L+RNG+ I + G G+M G+GE
Sbjct: 45 GESLFANHCAGCHINGGNILRRGKTLKLKALERNGITGPGAIAAIASAGLGQMSGYGEVL 104
Query: 133 TPRG 136
P G
Sbjct: 105 GPGG 108
>gi|9369269|emb|CAB99190.1| cytochrome c6 [Cyanophora paradoxa]
Length = 144
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGKGRMPGFGE 130
G ++F C CH GG NVI TL L++ +G D I GK MP
Sbjct: 63 GAAIFTNNCAACHAGGNNVIAAEKTLKKAALEQYLDGGYNVDAIKKQVTGGKNAMP---- 118
Query: 131 KCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL +++I +A++V SQA GW
Sbjct: 119 --------AFGGRLAEDEIAAVAEYVYSQAGNGW 144
>gi|428774947|ref|YP_007166734.1| cytochrome c class I [Halothece sp. PCC 7418]
gi|428689226|gb|AFZ42520.1| cytochrome c class I [Halothece sp. PCC 7418]
Length = 106
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
+F+ C CH GGN I TL + L+R +D+++ I GK MP F
Sbjct: 30 VFQANCAVCHANGGNRIMANKTLKQEALERYNMDSKEAIITQVKNGKSAMPAF------- 82
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G RL D I+ +A +V +QA++GW
Sbjct: 83 ----LG-RLNDAQIEAVADYVLNQAEKGW 106
>gi|209523313|ref|ZP_03271869.1| cytochrome c class I [Arthrospira maxima CS-328]
gi|423066583|ref|ZP_17055373.1| cytochrome c class I [Arthrospira platensis C1]
gi|209496464|gb|EDZ96763.1| cytochrome c class I [Arthrospira maxima CS-328]
gi|406711891|gb|EKD07089.1| cytochrome c class I [Arthrospira platensis C1]
Length = 114
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 75 SLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTY---FGKGRMPGFG 129
S+F C CH GG NVI TL DL + G D ED + V Y GK MP F
Sbjct: 33 SVFSANCAACHMGGRNVIVANKTLSKSDLAKYLKGFD-EDAVASVAYQVTNGKNAMPAFN 91
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ +P+ Q ED+ A +V QA++GW
Sbjct: 92 GRLSPK---------QIEDV---AAYVVDQAEKGW 114
>gi|78212548|ref|YP_381327.1| cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. CC9605]
gi|78197007|gb|ABB34772.1| possible cytochrome c6 (soluble cytochrome f) (cytochrome c553)
[Synechococcus sp. CC9605]
Length = 128
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 61 AVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN----GVDTEDEIYH 116
A+ ++ +++G +F C CH GGGNVI+ TL + DL + + + H
Sbjct: 30 AIDALKSSALERGEQIFNSNCAACHMGGGNVIRANRTLKISDLNAHVEAYSSSPLEALEH 89
Query: 117 VTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
G MP + + L DE+I +A +V+ +A+ GW +
Sbjct: 90 EIEDGLNAMPSYADT------------LSDEEIMAVATYVEQRAELGWSR 127
>gi|33866032|ref|NP_897591.1| cytochrome C6 (soluble cytochrome F) (cytochrome c553)
[Synechococcus sp. WH 8102]
gi|33639007|emb|CAE08013.1| possible cytochrome C6 (soluble cytochrome F) (cytochrome c553)
[Synechococcus sp. WH 8102]
Length = 118
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 16/99 (16%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN----GVDTEDEIYHVTYFGKGRM 125
I++G +F C CH GGGNVI+ +L ++DL + D + I H GK M
Sbjct: 32 IEQGEQIFSSNCAACHMGGGNVIRANRSLKIRDLNAHLEEYQQDPLEAIEHQIEAGKNAM 91
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
P ++ +L + +I +A +V+ QA+ GW
Sbjct: 92 P------------SYEGKLTEAEIIAVATYVEQQAELGW 118
>gi|332712047|ref|ZP_08431977.1| cytochrome c [Moorea producens 3L]
gi|332349375|gb|EGJ28985.1| cytochrome c [Moorea producens 3L]
Length = 158
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 12/116 (10%)
Query: 49 LCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGV 108
+ L ++ F A A D +G +F Q C CH GG NVI TL L+R +
Sbjct: 7 ILLTATVWFTFALERPALAGDAAQGAQVFSQNCAACHIGGNNVIMANKTLKKAVLKRYKM 66
Query: 109 DTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
++I GK MP F +K T +++I+ +A +V QAD W
Sbjct: 67 YDLEKIKTQVTNGKNAMPSFQKKLT------------EQEIENVATYVLLQADNDW 110
>gi|434387607|ref|YP_007098218.1| cytochrome c, mono- and diheme variants family [Chamaesiphon
minutus PCC 6605]
gi|428018597|gb|AFY94691.1| cytochrome c, mono- and diheme variants family [Chamaesiphon
minutus PCC 6605]
Length = 110
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D G +F C CH GG NVI L + L + G+++ I GK MP
Sbjct: 27 DAASGSKIFSANCAACHAGGNNVIMANKNLKKEALAQYGMNSVAAITTQVTNGKNAMPA- 85
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL I+ +A +V +Q+++GW
Sbjct: 86 -----------FGGRLSAAQIEDVATYVLAQSEKGW 110
>gi|186682288|ref|YP_001865484.1| cytochrome C6 [Nostoc punctiforme PCC 73102]
gi|186464740|gb|ACC80541.1| cytochrome c, class I [Nostoc punctiforme PCC 73102]
Length = 111
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A DI G +F C GCH G N+++ G L + L++ G+D+ + + + GK
Sbjct: 23 AMAADIVNGEQIFSLHCAGCHINGSNIVRRGKNLKKQALKKYGMDSIEAVTSIVTNGKNN 82
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
M + + RL ++ I +A +V QA++ W
Sbjct: 83 MSAYKD------------RLTEQQITDVAAYVLEQAEKDW 110
>gi|58613495|gb|AAW79334.1| chloroplast cytochrome c6 [Isochrysis galbana]
Length = 86
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGKGRMP 126
D G +F C CH GG NVI P TL L+ L+ +G + + + GK MP
Sbjct: 1 DAGAGEQVFSGNCAACHAGGMNVIMPEKTLQLEALEEYLDGGVSVQSVVYQVTNGKNAMP 60
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG RL DEDI +A +V +QA GW
Sbjct: 61 ------------AFGGRLSDEDIDNVATYVINQAKGGW 86
>gi|427419279|ref|ZP_18909462.1| cytochrome c, mono- and diheme variants family [Leptolyngbya sp.
PCC 7375]
gi|425761992|gb|EKV02845.1| cytochrome c, mono- and diheme variants family [Leptolyngbya sp.
PCC 7375]
Length = 120
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQ------RNGVDTEDEIYHVTYFGK 122
D+ G +F C CH GG N I TL + L+ R + E +Y V G+
Sbjct: 30 DVAAGEKVFTNTCATCHAGGNNAIVSSQTLKQEALEQYLFNYRLEHNVEAIVYQVAN-GR 88
Query: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
G MP F R+ D+ I +A +VK+Q++ GWP+
Sbjct: 89 GAMPA------------FQGRISDKAIADVAAYVKAQSESGWPE 120
>gi|434404370|ref|YP_007147255.1| cytochrome c, mono- and diheme variants family [Cylindrospermum
stagnale PCC 7417]
gi|428258625|gb|AFZ24575.1| cytochrome c, mono- and diheme variants family [Cylindrospermum
stagnale PCC 7417]
Length = 111
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A+ +D G +F C GCH GGN+I+ G L L++ G+D+ + I + GK
Sbjct: 23 AKALDTTNGAQIFGVHCAGCHINGGNIIRRGKNLKKNALKKYGMDSLEAISAIVTNGKSN 82
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
M + + RL ++I +A +V QA+ GW
Sbjct: 83 MSAYKD------------RLSSQEIADVAAYVLEQAETGW 110
>gi|376001408|ref|ZP_09779278.1| Cytochrome c6 (Soluble cytochrome f) (Cytochrome c553) [Arthrospira
sp. PCC 8005]
gi|375330237|emb|CCE15031.1| Cytochrome c6 (Soluble cytochrome f) (Cytochrome c553) [Arthrospira
sp. PCC 8005]
Length = 103
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 75 SLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTY---FGKGRMPGFG 129
S+F C CH GG NVI TL DL + G D ED + V Y GK MP F
Sbjct: 22 SVFSANCAACHMGGRNVIVANKTLSKSDLAKYLKGFD-EDAVASVAYQVTNGKNAMPAFN 80
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ +P+ Q ED+ A +V QA++GW
Sbjct: 81 GRLSPK---------QIEDV---AAYVVDQAEKGW 103
>gi|58618210|gb|AAW80670.1| chloroplast cytochrome c6 [Heterocapsa triquetra]
Length = 163
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNG-VDTEDEIYHVTYFGKG 123
A D++ G S+F C CH GG N + P + + L G D I VTY G G
Sbjct: 77 ALAADLENGESVFGANCAACHAGGNNSVVPEKKIKKEALVTYGKYDVAAIIKQVTY-GNG 135
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQ 162
MP FGE RL +DI+ +A +V QAD+
Sbjct: 136 SMPAFGE------------RLGPDDIEDVANYVFGQADK 162
>gi|88808315|ref|ZP_01123825.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp. WH
7805]
gi|88787303|gb|EAR18460.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp. WH
7805]
Length = 113
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 18/105 (17%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN-----GVDTEDEIYHVTY 119
A D +G +F C CH GGGN+I+ TL DL+ + G + VTY
Sbjct: 21 ANATDAVRGGQIFTTNCAACHAGGGNIIKAERTLREADLKAHLPNYLGAHESAIVAQVTY 80
Query: 120 FGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+ MP F + L + +I +A +V+ Q+ QGW
Sbjct: 81 -GRNAMPAFVDV------------LSESEIADVAAYVEEQSSQGW 112
>gi|58613493|gb|AAW79333.1| chloroplast cytochrome c6 [Heterocapsa triquetra]
Length = 163
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNG-VDTEDEIYHVTYFGKG 123
A D++ G S+F C CH GG N + P + + L G D I VTY G G
Sbjct: 77 ALAADLENGESVFGANCAACHAGGNNSVVPEKKIKKEALVTYGKYDVAAIIKQVTY-GNG 135
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQ 162
MP FGE RL +DI+ +A +V QAD+
Sbjct: 136 SMPAFGE------------RLGPDDIEDVANYVFGQADK 162
>gi|428297476|ref|YP_007135782.1| cytochrome c class I [Calothrix sp. PCC 6303]
gi|428234020|gb|AFY99809.1| cytochrome c class I [Calothrix sp. PCC 6303]
Length = 109
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL----FLKDLQRNGVDTEDEIYHVTYF 120
A ++ G +F C CH GGGN++ TL + L+ D I H
Sbjct: 18 ALAAEVSNGAKIFNNNCASCHLGGGNILIGEKTLQKSALSQYLEGYNTDAIASIIHQVQN 77
Query: 121 GKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GKG MP F K L++++I +A +V QA++GW
Sbjct: 78 GKGAMPAFKSK------------LKEQEILEVAAYVFQQAEEGW 109
>gi|148242016|ref|YP_001227173.1| cytochrome C6 [Synechococcus sp. RCC307]
gi|147850326|emb|CAK27820.1| Cytochrome C6 [Synechococcus sp. RCC307]
Length = 113
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQ----RNGVDTEDEIYHVTYF 120
A D+ G +F C+ CH GGGNV+ TL + L G E I +
Sbjct: 21 AFAADVAHGGQIFSANCVACHMGGGNVVNGERTLKAEALDAYLANYGDGHESAIAYQVTN 80
Query: 121 GKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
GK MP FG +L D DI +A +V+ A +GW
Sbjct: 81 GKNAMP------------AFGGKLSDGDIADVAAYVEDMASKGWA 113
>gi|186683068|ref|YP_001866264.1| cytochrome C, class I [Nostoc punctiforme PCC 73102]
gi|186465520|gb|ACC81321.1| cytochrome c, class I [Nostoc punctiforme PCC 73102]
Length = 106
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 62 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL----FLKDLQRNGVDTEDEIYHV 117
+S A + G +F C CH GGGN++ TL K L+ D+ + I H
Sbjct: 12 ISPALAAETSNGAKIFEANCASCHIGGGNILISQKTLKKEALSKYLENYNSDSIEAIIHQ 71
Query: 118 TYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GK MP F +G +L E+I +A +V A+QGW
Sbjct: 72 VQNGKNAMPAF------KG------KLSAEEILDVAAYVFQNAEQGW 106
>gi|157836468|pdb|2V08|A Chain A, Structure Of Wild-Type Phormidium Laminosum Cytochrome C6
gi|157836469|pdb|2V08|B Chain B, Structure Of Wild-Type Phormidium Laminosum Cytochrome C6
Length = 86
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
D+ G +F C CH GG N++ TL + L++ G+++ I GK MP
Sbjct: 2 ADLATGAKVFSANCAACHAGGINLVNAEKTLKKEALEKFGMNSIVAITTQVTNGKAGMPA 61
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
F +G RL D+ I +A +V QA++GW
Sbjct: 62 F------KG------RLTDDQIAAVAAYVLDQAEKGW 86
>gi|254422254|ref|ZP_05035972.1| Cytochrome c subfamily [Synechococcus sp. PCC 7335]
gi|196189743|gb|EDX84707.1| Cytochrome c subfamily [Synechococcus sp. PCC 7335]
Length = 117
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 51/123 (41%), Gaps = 21/123 (17%)
Query: 51 LPVSLGFFHAAVSLAQ----TVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR- 105
+ +GF AV LA DI +G +F C+ CH GG NV+Q TL L+
Sbjct: 5 IAAVIGFVFGAVLLAAPPALAGDIAQGKQVFATNCVACHAGGRNVVQADKTLKQDALESY 64
Query: 106 -NGVDTEDEIYHVTY---FGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQAD 161
E I + Y GK MP F RL + I+ +A +V QA+
Sbjct: 65 LENYGAEHNISAIVYQVTNGKNAMP------------AFSGRLTADQIEDVAAYVNDQAE 112
Query: 162 QGW 164
GW
Sbjct: 113 SGW 115
>gi|422294124|gb|EKU21424.1| cytochrome c6 [Nannochloropsis gaditana CCMP526]
Length = 187
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 72 KGVSLFRQACIGCHDGGGNVI--QPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
KG LF C CH G N+I G TL + L + +T I ++ GKG MP +
Sbjct: 93 KGARLFENNCASCHVAGTNIIGYARGKTLKEEALSKYKFNTRASIVNLLTEGKGVMPKYS 152
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G A+L ++++ +A +V QA GW
Sbjct: 153 SYTRKNGD-VVPAKLTEQEMGQVADYVLEQAKAGW 186
>gi|443323466|ref|ZP_21052472.1| cytochrome c, mono- and diheme variants family [Gloeocapsa sp. PCC
73106]
gi|442786851|gb|ELR96578.1| cytochrome c, mono- and diheme variants family [Gloeocapsa sp. PCC
73106]
Length = 108
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
DI G +F C CH GG NV+ TL DL++ + + + + GK MP F
Sbjct: 25 DIANGAKVFSANCAACHAGGLNVVNGAKTLKKGDLEKYEMYSLEAVKTQITKGKNAMPAF 84
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G RL + I+ +A +V +QA++GW
Sbjct: 85 -----------LG-RLNEAQIEDVASYVLAQAEKGW 108
>gi|427730066|ref|YP_007076303.1| cytochrome c, mono- and diheme variants family [Nostoc sp. PCC
7524]
gi|427365985|gb|AFY48706.1| cytochrome c, mono- and diheme variants family [Nostoc sp. PCC
7524]
Length = 108
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 22/105 (20%)
Query: 67 TVDIQKGVSLFRQACIGCHDGGGNVIQPGATL-------FLKDLQRNGVDTEDEIYHVTY 119
+ KG +F C CH GGGN++ TL +L D N ++ I H
Sbjct: 19 AAETSKGAKIFTNNCASCHIGGGNILVSKKTLKKEALSQYLNDYNNNAIEA---IIHQVE 75
Query: 120 FGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GK MP F K L +++I +A +V +A+Q W
Sbjct: 76 NGKNAMPAFKNK------------LSEQEILEVAAYVFQKAEQDW 108
>gi|354567847|ref|ZP_08987014.1| cytochrome c class I [Fischerella sp. JSC-11]
gi|353541521|gb|EHC10988.1| cytochrome c class I [Fischerella sp. JSC-11]
Length = 114
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 16/111 (14%)
Query: 58 FHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTED--E 113
F S Q +I +F C CH GGGNV+ TL + LQ+ DT+
Sbjct: 16 FFIFTSPVQAAEISDAAKIFNSNCASCHIGGGNVLIAEKTLKKEALQQYLKNYDTDSIAA 75
Query: 114 IYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
I H GK MP F K L +++I +A +V +A+QGW
Sbjct: 76 IIHQIQNGKNAMPAFKSK------------LSEDEIIQVAAYVFQKAEQGW 114
>gi|428207879|ref|YP_007092232.1| cytochrome c class I [Chroococcidiopsis thermalis PCC 7203]
gi|428009800|gb|AFY88363.1| cytochrome c class I [Chroococcidiopsis thermalis PCC 7203]
Length = 111
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 16/111 (14%)
Query: 54 SLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDE 113
+L F +AA++ DI G +F C CH GG NV+ TL L++ +++ +
Sbjct: 16 TLTFPNAALA----ADIANGAKVFNSNCAACHMGGKNVVMATKTLQKDALEKYSMNSLEA 71
Query: 114 IYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
I + GK MP F +G +L + I+ +A +V ++++GW
Sbjct: 72 IINQVTNGKNAMPAF------KG------KLNVQQIEDVASYVLDKSEKGW 110
>gi|88808380|ref|ZP_01123890.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp. WH
7805]
gi|88787368|gb|EAR18525.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp. WH
7805]
Length = 94
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 45/107 (42%), Gaps = 18/107 (16%)
Query: 64 LAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR-----NGVDTEDEIYHVT 118
+ D G +F C CH GGGNV+ TL DL+ N E Y VT
Sbjct: 1 MVSAADSAHGEQIFSANCAACHMGGGNVVNGQRTLQQDDLKAYLANYNEGHEEAIAYQVT 60
Query: 119 YFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
GK MP FG K P +DI +A +V+SQ+ GW
Sbjct: 61 N-GKNGMPAFGGKLGP------------DDIADVAAYVESQSINGWA 94
>gi|148239320|ref|YP_001224707.1| cytochrome C6 [Synechococcus sp. WH 7803]
gi|147847859|emb|CAK23410.1| Cytochrome C6 [Synechococcus sp. WH 7803]
Length = 113
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 18/105 (17%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN-----GVDTEDEIYHVTY 119
A D +G +F C CH GGGN+I+ TL DL+ + G + VTY
Sbjct: 21 ADATDTVRGGQIFTTNCAACHAGGGNIIKAERTLQEADLKAHLPNYLGAHESAIVAQVTY 80
Query: 120 FGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+ MP F + L + +I +A +V+ Q+ QGW
Sbjct: 81 -GRNAMPAFVDV------------LSESEIADVAAYVEEQSSQGW 112
>gi|440680160|ref|YP_007154955.1| Cytochrome c6 [Anabaena cylindrica PCC 7122]
gi|428677279|gb|AFZ56045.1| Cytochrome c6 [Anabaena cylindrica PCC 7122]
Length = 110
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G +F C CH GG N++Q +L +DL++ G+ + I GK MP F +
Sbjct: 31 GKVVFTANCASCHAGGKNLVQADKSLKKEDLEKYGIYSAAGIVAQVTNGKNAMPAFKD-- 88
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
RL+ + I+ +A +V QA+ GW
Sbjct: 89 ----------RLKADQIENVAAYVLEQAEAGW 110
>gi|322417992|ref|YP_004197215.1| cytochrome c class I [Geobacter sp. M18]
gi|320124379|gb|ADW11939.1| cytochrome c class I [Geobacter sp. M18]
Length = 131
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 60 AAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTY 119
AA + V ++G LF++ C CH GGNVI P TL L NG+ T +I +
Sbjct: 41 AARTGTHPVASERGRQLFKERCAACHPNGGNVINPKKTLHGGVLAENGITTPADIIN--- 97
Query: 120 FGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFV 156
K R PG G T Q T + D D +L+A++V
Sbjct: 98 --KMRNPGPG--MTRFDQAT----VPDADARLIAEYV 126
>gi|427709476|ref|YP_007051853.1| cytochrome c class I [Nostoc sp. PCC 7107]
gi|427361981|gb|AFY44703.1| cytochrome c class I [Nostoc sp. PCC 7107]
Length = 125
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A D G +F C GCH G N+I+ G L L++ +D+ + I + GK
Sbjct: 37 ASASDTANGAEIFSVHCAGCHINGSNIIRRGKNLKKPALKKYNMDSIEAITSIVTNGKSN 96
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
M + + RL ++ I+ +A +V QA + W
Sbjct: 97 MSAYKD------------RLTEQQIQDVATYVLEQAAKDW 124
>gi|307153936|ref|YP_003889320.1| cytochrome c class I [Cyanothece sp. PCC 7822]
gi|306984164|gb|ADN16045.1| cytochrome c class I [Cyanothece sp. PCC 7822]
Length = 112
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G +F C CH GG N++ TL DL++ + ++I GKG MP
Sbjct: 31 GAKIFSARCASCHAGGKNIVNAQKTLSKVDLEKYDMFDLEKIKTQVTNGKGAMP------ 84
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
+F A L+ E I+ +A +V A++GW K
Sbjct: 85 ------SFKALLKPEQIEDVATYVLDSAEKGWKK 112
>gi|39997837|ref|NP_953788.1| cytochrome c, 1 heme-binding site [Geobacter sulfurreducens PCA]
gi|409913188|ref|YP_006891653.1| cytochrome c, 1 heme-binding site [Geobacter sulfurreducens KN400]
gi|39984729|gb|AAR36115.1| cytochrome c, 1 heme-binding site [Geobacter sulfurreducens PCA]
gi|298506771|gb|ADI85494.1| cytochrome c, 1 heme-binding site [Geobacter sulfurreducens KN400]
Length = 111
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 55 LGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEI 114
L F A+ D+++G LF+Q C CH GGN++ P L + L+ N + + +I
Sbjct: 16 LSFGVASAKGKGDKDLKRGEELFKQHCAVCHPEGGNIVNPQKPLGKESLKANKITSWKDI 75
Query: 115 YHVTYFGKGRMPGFGEKCTPRGQCTFGAR-LQDEDIKLLAQFV 156
R PG G TF A+ + D+D KL+A+++
Sbjct: 76 VKTM-----RNPG-------PGMSTFDAKAIPDKDAKLVAEYI 106
>gi|440681468|ref|YP_007156263.1| cytochrome c class I [Anabaena cylindrica PCC 7122]
gi|428678587|gb|AFZ57353.1| cytochrome c class I [Anabaena cylindrica PCC 7122]
Length = 134
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 24/129 (18%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQ--------KGVSLFRQACIGCHDGGGNVIQPGATLF 99
+L L +++ + A++ L ++ I KG +F C CH GG N++ TL
Sbjct: 15 LLILFLAIAWLAASIVLFNSIIIYPASATETFKGREIFNANCASCHIGGNNILVEHKTLE 74
Query: 100 LKDLQR--NGVDTE--DEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQF 155
+ L + DTE I H GKG MP F K L D+++ A +
Sbjct: 75 KEALAKYLKNYDTEPIQAIIHQIQNGKGAMPSFKNK------------LSDQEMIETAAY 122
Query: 156 VKSQADQGW 164
V +A++GW
Sbjct: 123 VFQKAEKGW 131
>gi|116074523|ref|ZP_01471784.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp.
RS9916]
gi|116067745|gb|EAU73498.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp.
RS9916]
Length = 121
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 44/95 (46%), Gaps = 18/95 (18%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQ---RNGVDTEDE--IYHVTYFGKGRMPGFGE 130
+F C CH GGGNV+ TL DL+ N D +E Y VT GK MP FG
Sbjct: 40 VFSANCAACHIGGGNVVNGQRTLQQDDLKAYLANYNDGHEEAIAYQVTN-GKNGMPAFGG 98
Query: 131 KCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
K L +DI +A +V+SQ+ GW
Sbjct: 99 K------------LSSDDIADVAAYVESQSVNGWA 121
>gi|317969244|ref|ZP_07970634.1| cytochrome C6 [Synechococcus sp. CB0205]
Length = 111
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G LF C GCH GGN+I+ G TL L L+R G+ +++ I + G+G+M G+ E
Sbjct: 29 GAQLFELHCAGCHLNGGNIIRRGKTLKLAALERQGIASQEAIAAIAAQGQGQMSGYVEA- 87
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
L ++ ++ +A++V Q+ GWPK
Sbjct: 88 -----------LGEDGVQQVAEWVWQQSQAGWPK 110
>gi|427710665|ref|YP_007053042.1| cytochrome c class I [Nostoc sp. PCC 7107]
gi|427363170|gb|AFY45892.1| cytochrome c class I [Nostoc sp. PCC 7107]
Length = 128
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 41/104 (39%), Gaps = 16/104 (15%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL----FLKDLQRNGVDTEDEIYHVTYF 120
A + G +F C CH GGGN++ TL K L D+ I H
Sbjct: 37 ALAAETSNGAKIFSANCSSCHIGGGNILVAEKTLTKEALSKYLADYNTDSIQAIIHQVQN 96
Query: 121 GKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GK MP F K T E+I +A +V QA+ GW
Sbjct: 97 GKNAMPPFKNKLT------------SEEILDVAAYVFQQAEHGW 128
>gi|427738919|ref|YP_007058463.1| cytochrome c, mono- and diheme variants family [Rivularia sp. PCC
7116]
gi|427373960|gb|AFY57916.1| cytochrome c, mono- and diheme variants family [Rivularia sp. PCC
7116]
Length = 109
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
+F C CH GG N++ TL DL++ + + + I + GK MP
Sbjct: 33 VFNANCASCHAGGRNLVNAQKTLSKADLEKYDMYSIEAITNQVTNGKNAMPA-------- 84
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQGW 164
F RL D I+ +A +V S+A+ GW
Sbjct: 85 ----FKGRLSDAQIQDVAAYVLSKAEAGW 109
>gi|323454658|gb|EGB10528.1| hypothetical protein AURANDRAFT_23725, partial [Aureococcus
anophagefferens]
Length = 89
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGKGRMP 126
D++ G ++F C CH GG NVI TL + L G E + GK MP
Sbjct: 1 DVESGATIFAGNCAACHAGGNNVIAAEKTLRKEALDSYLTGGRKESSVVTQVTNGKNAMP 60
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQAD 161
FG RL DE+I +A +V QA+
Sbjct: 61 ------------AFGGRLSDEEIGDVAAYVIDQAN 83
>gi|282899583|ref|ZP_06307547.1| Cytochrome c, class I [Cylindrospermopsis raciborskii CS-505]
gi|281195462|gb|EFA70395.1| Cytochrome c, class I [Cylindrospermopsis raciborskii CS-505]
Length = 118
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 17/122 (13%)
Query: 48 VLCLPVSLGF-FHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL----FLKD 102
VL L +++ F F + + +I +G ++F+ C CH GGGN++ TL K
Sbjct: 9 VLILAIAVFFSFTLIIEPVLSAEISRGHAIFKTECASCHVGGGNILVENKTLKTSAMKKY 68
Query: 103 LQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQ 162
L+ D I + GK MP F K T E+I + +V A+
Sbjct: 69 LENYDTDPIGAIVNQIQNGKSAMPAFKNKLT------------KEEILEVGLYVFQMAET 116
Query: 163 GW 164
GW
Sbjct: 117 GW 118
>gi|354568161|ref|ZP_08987327.1| cytochrome c class I [Fischerella sp. JSC-11]
gi|353541126|gb|EHC10596.1| cytochrome c class I [Fischerella sp. JSC-11]
Length = 113
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A D G +F C GCH G N+++ G L LK L++ +D+ + I + GK
Sbjct: 25 ALAADTTNGAKIFDVHCAGCHLNGSNIVRRGKNLKLKALKKYSMDSTEAIAFIVANGKNN 84
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
M + + RL +++I+ +A +V QA++GW
Sbjct: 85 MSAYKD------------RLSEQEIQDVAAYVLQQAEKGW 112
>gi|197118564|ref|YP_002138991.1| lipoprotein cytochrome c [Geobacter bemidjiensis Bem]
gi|197087924|gb|ACH39195.1| cytochrome c, 1 heme-binding site [Geobacter bemidjiensis Bem]
Length = 110
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 45 TYNVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQ 104
+ +VL L V A A+ D + + F Q C+ CH GGN+I+P TL K L
Sbjct: 8 SVSVLSLAVMAAPGICAAKKAEKTDAK---AKFDQHCVACHPKGGNIIRPDKTLSKKSLA 64
Query: 105 RNGVDTEDEIYHVTYFGKGRMPG-----FGEKCTPRGQCTFGAR 143
+G+ +E +I K R PG F K P + T A+
Sbjct: 65 GHGIKSEKDI-----VAKMRNPGAGMTKFDAKAVPDAEATAIAK 103
>gi|298492418|ref|YP_003722595.1| cytochrome c class I ['Nostoc azollae' 0708]
gi|298234336|gb|ADI65472.1| cytochrome c class I ['Nostoc azollae' 0708]
Length = 111
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
+F C CH GG N++ G +L DL++ + +E+ I GKG MP
Sbjct: 34 VFTANCASCHAGGKNLVNAGKSLKKADLEKYNMYSEEAILAQVTKGKGAMP--------- 84
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQGW 164
F +LQ I+ +A +V QA W
Sbjct: 85 ---AFQGKLQPAQIENVAAYVFEQAGNEW 110
>gi|428218922|ref|YP_007103387.1| cytochrome c class I [Pseudanabaena sp. PCC 7367]
gi|427990704|gb|AFY70959.1| cytochrome c class I [Pseudanabaena sp. PCC 7367]
Length = 113
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 16/118 (13%)
Query: 51 LPVSLGFFHAAVSLAQ---TVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNG 107
L V + F ++ Q D G LF C CH G N++ TL L+ G
Sbjct: 9 LGVLICLFTCSIVFVQPSYAADAANGAKLFSVNCASCHAKGRNLVIKNKTLQKDALETYG 68
Query: 108 VDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
+ + ++I + GK MP F +L D+ ++ +A +V QAD GW
Sbjct: 69 MYSIEKIVYQIGHGKNAMPAF-------------RKLSDQQMEDIATYVLQQADNGWS 113
>gi|282900302|ref|ZP_06308253.1| Cytochrome c, class I [Cylindrospermopsis raciborskii CS-505]
gi|281194807|gb|EFA69753.1| Cytochrome c, class I [Cylindrospermopsis raciborskii CS-505]
Length = 110
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
+F+ C CH GG N+ TL DL+ + ++D I GK MP
Sbjct: 34 VFQANCAQCHAGGKNLANAAKTLSKADLEEYNLYSQDAIIAQVTNGKNSMP--------- 84
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQGW 164
F +L E I +A +V QA+ GW
Sbjct: 85 ---KFKGKLSAEQIADVAAYVMEQAEAGW 110
>gi|414076140|ref|YP_006995458.1| cytochrome c class 1 [Anabaena sp. 90]
gi|413969556|gb|AFW93645.1| cytochrome c class 1 [Anabaena sp. 90]
Length = 111
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A +D G +F C GCH G N+I+ G L L++ G+D+ + I + GK
Sbjct: 23 ANALDTGNGAEIFSFHCAGCHIHGENIIRRGKNLKKNALKKYGMDSLEAITAIVTNGKNN 82
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
M + + RL E+I+ +A +V QA++ W
Sbjct: 83 MSAYKK------------RLTTEEIQQVAAYVLEQAEKDW 110
>gi|3121976|sp|P81244.1|CYC6_PROHO RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
Length = 45
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 24/42 (57%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEI 114
G S+F C CH GG N+I P TL L DLQ NG DT I
Sbjct: 4 GASIFSAKCAQCHLGGKNIINPTKTLSLADLQANGKDTVSAI 45
>gi|443310407|ref|ZP_21040061.1| hypothetical protein Syn7509DRAFT_00035290 [Synechocystis sp. PCC
7509]
gi|442779563|gb|ELR89802.1| hypothetical protein Syn7509DRAFT_00035290 [Synechocystis sp. PCC
7509]
Length = 112
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Query: 53 VSLGFFHAAVSLAQTVDIQ--KGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDT 110
++LG F A + + +Q +G +F Q C CH GGGN++ + L + +D+
Sbjct: 11 LALGIFAALLLGNLALAVQTNRGGEIFGQHCAACHLGGGNIVIEDKNSHISALAKYKMDS 70
Query: 111 EDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
I GK MP F RL D I+ +A +V QA +GW
Sbjct: 71 TRAIASQVKHGKKAMP------------AFIGRLSDFQIEEIAIYVLEQAKKGW 112
>gi|332878344|ref|ZP_08446070.1| cytochrome [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683795|gb|EGJ56666.1| cytochrome [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 177
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 56 GFFHAAVSL----AQTVDIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRNG 107
G+ A SL + TVD +G +L+ C CH DG G ++Q G + Q G
Sbjct: 70 GYEQAKASLRADASLTVDAARGRALYNVYCALCHGEQGDGKGVLVQRGKVFGVP--QFAG 127
Query: 108 VD-TEDEIYHVTYFGKGRMPGFGEKCT 133
D TE IYHV Y+G+ MP F + T
Sbjct: 128 RDFTEGSIYHVLYYGRNAMPAFATQLT 154
>gi|323447684|gb|EGB03596.1| hypothetical protein AURANDRAFT_33813 [Aureococcus anophagefferens]
Length = 89
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGKGRMP 126
D++ G ++F C CH GG NVI TL + L G E + GK MP
Sbjct: 1 DVESGATIFAGNCAACHAGGNNVIAAEKTLRKEALDSYLAGGRKESSVVTQVTNGKNAMP 60
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQAD 161
FG RL DE+I +A +V QA+
Sbjct: 61 ------------AFGGRLSDEEIGDVAAYVIDQAN 83
>gi|428781085|ref|YP_007172871.1| cytochrome c, mono- and diheme variants family [Dactylococcopsis
salina PCC 8305]
gi|428695364|gb|AFZ51514.1| cytochrome c, mono- and diheme variants family [Dactylococcopsis
salina PCC 8305]
Length = 145
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A ++ K V L + C CH GG N + L L++ +D+ I GK
Sbjct: 56 AANLENGKKVFLAQANCTQCHRGGLNTVIANKHLGQDALEKYNMDSMAAIAQQVRNGKNA 115
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MP +G RL DE I+ +A +V QA++GW
Sbjct: 116 MPAYGR------------RLTDEQIRDVAAYVLDQAEKGW 143
>gi|434404902|ref|YP_007147787.1| cytochrome c, mono- and diheme variants family [Cylindrospermum
stagnale PCC 7417]
gi|428259157|gb|AFZ25107.1| cytochrome c, mono- and diheme variants family [Cylindrospermum
stagnale PCC 7417]
Length = 114
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 20/114 (17%)
Query: 55 LGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL----FLKDLQRNGVDT 110
L F H A++ A+T + G +F C CH GGGN++ TL K L D+
Sbjct: 17 LTFVHPALA-AETAN---GAKIFNANCASCHIGGGNILIEHKTLKKEALSKYLANYDSDS 72
Query: 111 EDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
I + GK MP F +K L ++I +A +V +A+QGW
Sbjct: 73 IQAIIYQVQNGKNAMPAFKDK------------LSAQEILEVAAYVFQKAEQGW 114
>gi|352094454|ref|ZP_08955625.1| cytochrome c class I [Synechococcus sp. WH 8016]
gi|351680794|gb|EHA63926.1| cytochrome c class I [Synechococcus sp. WH 8016]
Length = 113
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 18/105 (17%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR---NGVDTEDE--IYHVTY 119
A D +G +F C CH GGGN+++ TL DL+ N V + + VTY
Sbjct: 21 AMASDTVRGGQIFNTNCAACHAGGGNIVKSERTLRQADLEAFLPNYVTGHETGIVAQVTY 80
Query: 120 FGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G+ MP F + L + +I +A +V+ QA GW
Sbjct: 81 -GRNAMPAFLDV------------LSENEIADVAAYVEDQASHGW 112
>gi|427719567|ref|YP_007067561.1| cytochrome c class I [Calothrix sp. PCC 7507]
gi|427352003|gb|AFY34727.1| cytochrome c class I [Calothrix sp. PCC 7507]
Length = 114
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 16/104 (15%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL----FLKDLQRNGVDTEDEIYHVTYF 120
A + G +F C CH GGGN++ TL K L+ D+ I +
Sbjct: 23 ALAAETANGAKIFNANCSSCHIGGGNILISQKTLTKEALSKYLENYDQDSIQAIIYQVQN 82
Query: 121 GKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GK MP F K L +++I +A ++ QA+QGW
Sbjct: 83 GKNAMPAFKNK------------LSNQEILEVATYIFQQAEQGW 114
>gi|117922|sp|P11448.1|CYC6_BRYMA RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
gi|359742|prf||1313302A cytochrome c6
Length = 88
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 14/98 (14%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGKGRMP 126
D++ G +F C CH GG N ++P TL +D+ + +G + + I GKG MP
Sbjct: 3 DLEIGADVFTGNCAACHAGGANSVEPLKTLNKEDVTKYLDGGLSIEAITSQVRNGKGAMP 62
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ + RL DE+I + +V ++GW
Sbjct: 63 AWSD------------RLDDEEIDGVVAYVFKNINEGW 88
>gi|420148837|ref|ZP_14656026.1| cytochrome C [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394754672|gb|EJF38012.1| cytochrome C [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 177
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 60 AAVSLAQTVDIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRNGVDTEDEIY 115
A +L QT ++ G +L+ C+ CH DG G ++Q L + + + + TE IY
Sbjct: 83 ATDTLQQTQNLNNGKALYGIYCVLCHGEKGDGKGVLVQREKILGVPNYKSREL-TEGSIY 141
Query: 116 HVTYFGKGRMPGFGEKCT 133
HV Y+G+ MP F + +
Sbjct: 142 HVLYYGRNTMPAFANQLS 159
>gi|113953111|ref|YP_730957.1| cytochrome C, class IC:cytochrome C, class I [Synechococcus sp.
CC9311]
gi|113880462|gb|ABI45420.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp.
CC9311]
Length = 113
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 20/106 (18%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR------NGVDTEDEIYHVT 118
A D +G +F C CH GGGN+++ TL DL+ G +T + VT
Sbjct: 21 AMASDTVRGGQIFNTNCAACHAGGGNIVKSERTLRQDDLEAFLPNYLTGHET-GIVAQVT 79
Query: 119 YFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
Y G+ MP F + L + +I +A +V+ QA GW
Sbjct: 80 Y-GRNAMPAFLDV------------LSENEIADVAAYVEDQASHGW 112
>gi|440680161|ref|YP_007154956.1| Cytochrome c6 [Anabaena cylindrica PCC 7122]
gi|428677280|gb|AFZ56046.1| Cytochrome c6 [Anabaena cylindrica PCC 7122]
Length = 111
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
+F C CH GG N++ +L DL + + + + I GKG MP F +
Sbjct: 34 VFTANCASCHAGGKNLVNAAKSLKKADLVKYDMYSAEAIIAQVTKGKGAMPAF------K 87
Query: 136 GQCTFGARLQDEDIKLLAQFVKSQADQGW 164
G RL+ I+ +A +V QAD+ W
Sbjct: 88 G------RLKPAQIENVAAYVLEQADKDW 110
>gi|87124133|ref|ZP_01079983.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp.
RS9917]
gi|86168702|gb|EAQ69959.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp.
RS9917]
Length = 121
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCT-- 133
+F C CH GGGNV+ TL DL +++ +G+G + T
Sbjct: 40 IFSANCAACHIGGGNVVNAERTLKQADLDA----------YLSGYGEGHEAAIAAQVTKG 89
Query: 134 PRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+F +L D DI +A +V+ QA GW
Sbjct: 90 KNAMPSFLGKLSDTDIADVAAYVEQQAGNGW 120
>gi|87124122|ref|ZP_01079972.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp.
RS9917]
gi|86168691|gb|EAQ69948.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp.
RS9917]
Length = 133
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 20/95 (21%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQ------RNGVDTEDEIYHVTYFGKGRMPGFG 129
+F C CH GGGN++ TL DLQ NG E I +G+ MP F
Sbjct: 52 VFSSNCAACHAGGGNIVNGERTLRQADLQDYLAQYSNG--HESAIVAQVTYGRNAMPAFI 109
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ L + I +A +V+ QA +GW
Sbjct: 110 DT------------LTETQISDVAAYVEEQASKGW 132
>gi|119485354|ref|ZP_01619682.1| cytochrome c6 [Lyngbya sp. PCC 8106]
gi|119457110|gb|EAW38236.1| cytochrome c6 [Lyngbya sp. PCC 8106]
Length = 115
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 18/101 (17%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDE---IYHVTYFGKG 123
D G +F C CH GG NVI TL DL + G + + + Y +T GK
Sbjct: 28 DPATGSQVFAANCNACHMGGKNVIMSNKTLSKADLAKYLKGFNDDPQAAIAYQITK-GKN 86
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MP F + +P+ Q ED+ + +V S+AD+GW
Sbjct: 87 AMPAFKGRLSPQ---------QIEDV---SAYVFSKADKGW 115
>gi|411118456|ref|ZP_11390837.1| photosystem II cytochrome PsbV2 [Oscillatoriales cyanobacterium
JSC-12]
gi|410712180|gb|EKQ69686.1| photosystem II cytochrome PsbV2 [Oscillatoriales cyanobacterium
JSC-12]
Length = 168
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Query: 52 PVSLGFF-HAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDT 110
P++L F V L D+ KG LF + C+ CH GG + P L L LQ +
Sbjct: 46 PINLPFDDQGTVRLFTATDLSKGKKLFEKNCLSCHVGGTTLPNPNVPLSLTALQ-GAIPR 104
Query: 111 EDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFV--KSQADQGWPKIE 168
D I + F + M G + Q + + D++ +A F+ +Q GW IE
Sbjct: 105 RDTINSLVAFLRQPMTYDGSEEAILCQRIPESWMPTVDVEAIAAFILRAAQKAPGW-GIE 163
Query: 169 SMED 172
+ E+
Sbjct: 164 TFEN 167
>gi|404492143|ref|YP_006716249.1| lipoprotein cytochrome c, 1 heme-binding site [Pelobacter
carbinolicus DSM 2380]
gi|77544256|gb|ABA87818.1| lipoprotein cytochrome c, 1 heme-binding site [Pelobacter
carbinolicus DSM 2380]
Length = 150
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 63 SLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGK 122
S+A D G LF+Q C CH GG N+I P TL + L++NG+ + +I +
Sbjct: 66 SMAAATD--NGAVLFQQHCAVCHPGGSNIITPEKTLDRQTLEKNGITSVQDIVAIL---- 119
Query: 123 GRMPGFGEKCTPRGQCTFGAR-LQDEDIKLLAQFV 156
R PG G TFG L D++ +A+ +
Sbjct: 120 -RNPG-------PGMTTFGPEVLSDKEAGQVAEHI 146
>gi|427701449|ref|YP_007044671.1| cytochrome c, mono- and diheme variants family [Cyanobium gracile
PCC 6307]
gi|427344617|gb|AFY27330.1| cytochrome c, mono- and diheme variants family [Cyanobium gracile
PCC 6307]
Length = 113
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 47/122 (38%), Gaps = 21/122 (17%)
Query: 48 VLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL----FLKDL 103
LCL + LG + + D G +F C CH GGGNV+ TL L
Sbjct: 9 ALCLALVLG-----AAPSFAADAAHGGQIFSANCAACHMGGGNVVNAERTLKADALASYL 63
Query: 104 QRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQG 163
E I + GK MP FG K L + DI +A +V+ A +G
Sbjct: 64 ANYDAGHEAAIAYQVTNGKNAMPAFGGK------------LSEGDIADVAAYVEDMASKG 111
Query: 164 WP 165
W
Sbjct: 112 WA 113
>gi|116075527|ref|ZP_01472787.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp.
RS9916]
gi|116067724|gb|EAU73478.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp.
RS9916]
Length = 113
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 39/101 (38%), Gaps = 18/101 (17%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDL-----QRNGVDTEDEIYHVTYFGKG 123
D G +F C CH GGGNV+ TL DL Q N + VTY G
Sbjct: 25 DAVNGAKVFSANCAACHAGGGNVVNGEHTLQQDDLKAYLAQYNNGHESAIVAQVTY-GLN 83
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MP F L + I +A +V+ QA GW
Sbjct: 84 EMP------------AFIGTLTENQISDVAAYVEEQASNGW 112
>gi|197725283|pdb|3DP5|A Chain A, Crystal Structure Of Geobacter Sulfurreducens Omcf With N-
Terminal Strep-Tag Ii
Length = 99
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 67 TVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDT-EDEIYHVTYFGKGRM 125
V G LF C GCH GGN + P TL + NG+ T D ++ G G M
Sbjct: 16 AVPNSGGGELFATHCAGCHPQGGNTVHPEKTLARARREANGIRTVRDVAAYIRNPGPG-M 74
Query: 126 PGFGEKCTP 134
P FGE P
Sbjct: 75 PAFGEAMIP 83
>gi|215687009|dbj|BAG90823.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 113
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 72 KGVSLFRQACIGCHDGGGNVIQP 94
+G +LFR+ACIGCHD GGN++QP
Sbjct: 88 EGAALFRKACIGCHDMGGNILQP 110
>gi|300863710|ref|ZP_07108642.1| Cytochrome c-550-like protein [Oscillatoria sp. PCC 6506]
gi|300338278|emb|CBN53788.1| Cytochrome c-550-like protein [Oscillatoria sp. PCC 6506]
Length = 167
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D+ G LF Q C+ CH GG + P +L LKDL + D + + F + M
Sbjct: 64 DLSAGKRLFGQNCLNCHVGGATLPNPMVSLSLKDL-KAATPPRDNVSSLVAFLREPMSYD 122
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFV--KSQADQGWPKIESMED 172
G + + + + + E I+ LA FV +Q GW +ES E+
Sbjct: 123 GSEESYWCREVPESWMPQEQIENLAAFVLRAAQKAPGW-GVESFEN 167
>gi|170076799|ref|YP_001733437.1| cytochrome c6 [Synechococcus sp. PCC 7002]
gi|3121980|sp|O30881.1|CYC6_SYNP2 RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f; Flags: Precursor
gi|2522461|gb|AAB81077.1| cytochrome c6 precursor [Synechococcus sp. PCC 7002]
gi|169884468|gb|ACA98181.1| Cytochrome c6 precursor (Cytochrome c553) [Synechococcus sp. PCC
7002]
Length = 117
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 19/89 (21%)
Query: 81 CIGCHDGGGNVIQPGATL-------FLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCT 133
C CH GG N + P TL +L + E+ + + G+G MP
Sbjct: 38 CAACHAGGNNAVMPTKTLKADALKTYLAGYKDGSKSLEEAVAYQVTNGQGAMP------- 90
Query: 134 PRGQCTFGARLQDEDIKLLAQFVKSQADQ 162
FG RL D DI +A ++ QA+
Sbjct: 91 -----AFGGRLSDADIANVAAYIADQAEN 114
>gi|325969304|ref|YP_004245496.1| hypothetical protein VMUT_1793 [Vulcanisaeta moutnovskia 768-28]
gi|323708507|gb|ADY01994.1| hypothetical protein VMUT_1793 [Vulcanisaeta moutnovskia 768-28]
Length = 297
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 21/159 (13%)
Query: 24 PLKSFHWKQQLSMELELQKYDTYNVLCLPVSLGFFHAAVSLAQTVDIQKGVSLF------ 77
P+ +HW+ + ME L KY +N C+ + + +S D ++ F
Sbjct: 102 PVLHYHWRTDIIMEY-LVKYLDFNPKCIAIGGLVPYVLISRGVPKDSRRSALRFLLRIKQ 160
Query: 78 -RQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTED-EIYHV-TYFGKGRMPGFGEKCTP 134
CI G +I P L GVD+ D + V +GK MPG GE+
Sbjct: 161 ETDTCIHVLGLGSPIINPILKLI-------GVDSTDTSTWRVKAAYGKVIMPGGGERHVS 213
Query: 135 RGQCTFGA-RLQDEDIKLLAQFVKSQADQGWPKIESMED 172
FG ++ +D+ L +F++ D G+P I+ D
Sbjct: 214 GRSINFGGKKITPDDLMRLHKFLR---DTGFPIIDRFND 249
>gi|119483358|ref|ZP_01618772.1| cytochrome c550 like protein [Lyngbya sp. PCC 8106]
gi|119458125|gb|EAW39247.1| cytochrome c550 like protein [Lyngbya sp. PCC 8106]
Length = 175
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYH-VTYFGKGRMPG 127
DI G LF +C+ CH GG N+ P +L L+DL + D I + V+YF R P
Sbjct: 64 DINTGKMLFEASCLNCHAGGVNIPYPTVSLSLEDL-KAATPARDNIKNLVSYF---RYPL 119
Query: 128 FGEKCTPRGQC-----TFGARLQDEDIKLLAQFVKS-QADQGWPKIESMED 172
+ C ++ +++Q E KL A ++S QA GW K + +
Sbjct: 120 SFDGSDTNYWCRQISESWMSQVQAE--KLAAYIIRSAQAAPGWGKTQEANE 168
>gi|253701235|ref|YP_003022424.1| cytochrome C class I [Geobacter sp. M21]
gi|251776085|gb|ACT18666.1| cytochrome c class I [Geobacter sp. M21]
Length = 138
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
G LF+Q C CH GGN I P TL K + + + D+I V R PG G
Sbjct: 61 GEQLFKQHCAACHPNGGNTITPAKTLSKKAMADRNIKSADDIVKVM-----RNPGPG 112
>gi|148262414|ref|YP_001229120.1| cytochrome c, class I [Geobacter uraniireducens Rf4]
gi|146395914|gb|ABQ24547.1| cytochrome c, class I [Geobacter uraniireducens Rf4]
Length = 120
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G F + C CH GGN+I P L K+ + NGV T +I K R PG
Sbjct: 43 GKKEFEEHCTACHANGGNIINPAKPLHKKEREANGVKTARDI-----IAKMRNPG----- 92
Query: 133 TPRGQCTFGAR-LQDEDIKLLAQFV 156
G F + + D++ K +A ++
Sbjct: 93 --PGMNKFDKKTISDKEAKAIANYI 115
>gi|429756600|ref|ZP_19289188.1| hypothetical protein HMPREF9072_01934 [Capnocytophaga sp. oral
taxon 324 str. F0483]
gi|429171015|gb|EKY12664.1| hypothetical protein HMPREF9072_01934 [Capnocytophaga sp. oral
taxon 324 str. F0483]
Length = 178
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 60 AAVSLAQTVDIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRNGVDTEDEIY 115
A +L QT ++ G L+ C CH DG G ++Q L + + + + TE IY
Sbjct: 84 ATDTLQQTQNLTDGKKLYGIYCALCHGEKGDGKGVLVQREKILGVPNYKSREL-TEGSIY 142
Query: 116 HVTYFGKGRMPGFGEKCT 133
HV Y+G+ MP F + +
Sbjct: 143 HVLYYGRNTMPAFANQLS 160
>gi|349700844|ref|ZP_08902473.1| alcohol dehydrogenase [Gluconacetobacter europaeus LMG 18494]
Length = 697
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 13/98 (13%)
Query: 67 TVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMP 126
T Q+G + CIGCH G +V+ G L DL+ +G ++D ++ G+G +
Sbjct: 606 TAAAQRGAPDYATYCIGCH--GHDVMSGGV---LPDLRWSGALSDDTGFY-NVVGRGALT 659
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
FG FG+ L + I+ + QF+ QA++ W
Sbjct: 660 AFGMD-------EFGSVLSRQKIEDIRQFIIQQANRSW 690
>gi|39997527|ref|NP_953478.1| lipoprotein cytochrome c, 1 heme-binding site [Geobacter
sulfurreducens PCA]
gi|409912884|ref|YP_006891349.1| lipoprotein cytochrome c, 1 heme-binding site [Geobacter
sulfurreducens KN400]
gi|39984418|gb|AAR35805.1| lipoprotein cytochrome c, 1 heme-binding site [Geobacter
sulfurreducens PCA]
gi|298506470|gb|ADI85193.1| lipoprotein cytochrome c, 1 heme-binding site [Geobacter
sulfurreducens KN400]
Length = 104
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDT-EDEIYHVTYFGKGRMPGFGEKCTP 134
LF C GCH GGN + P TL + NG+ T D ++ G G MP FGE P
Sbjct: 30 LFATHCAGCHPQGGNTVHPEKTLARARREANGIRTVRDVAAYIRNPGPG-MPAFGEAMIP 88
>gi|209870442|pdb|3CU4|A Chain A, Omcf, Outer Membrance Cytochrome F From Geobacter
Sulfurreducens
Length = 85
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDT-EDEIYHVTYFGKGRMPGFGEKCTP 134
LF C GCH GGN + P TL + NG+ T D ++ G G MP FGE P
Sbjct: 11 LFATHCAGCHPQGGNTVHPEKTLARARREANGIRTVRDVAAYIRNPGPG-MPAFGEAMIP 69
>gi|90101225|sp|P0C180.1|CYC6_ANAVA RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
Length = 86
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 12/97 (12%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
D G +F C CH GG N+ TL DL++ G + I GK MP
Sbjct: 1 ADSVNGAKIFSANCASCHAGGKNLGVAQKTLKKADLEKYGAYSAMAIGAQVTNGKNAMP- 59
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
F RL+ E+I +A +V +A+ W
Sbjct: 60 -----------AFKGRLKPEEIXXVAAYVLGKAEAEW 85
>gi|429745886|ref|ZP_19279268.1| cytochrome [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429167635|gb|EKY09536.1| cytochrome [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 177
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 60 AAVSLAQTVDIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRNGVDTEDEIY 115
A +L QT ++ G L+ C CH DG G ++Q L + + + + TE IY
Sbjct: 83 ATDTLQQTQNLTDGKKLYGIYCALCHGEKGDGKGILVQREKILGVPNYKSREL-TEGSIY 141
Query: 116 HVTYFGKGRMPGFGEKCT 133
HV Y+G+ MP F + +
Sbjct: 142 HVLYYGRNTMPAFANQLS 159
>gi|254220950|pdb|3DR0|A Chain A, Structure Of Reduced Cytochrome C6 From Synechococcus Sp.
Pcc 7002
gi|254220951|pdb|3DR0|B Chain B, Structure Of Reduced Cytochrome C6 From Synechococcus Sp.
Pcc 7002
gi|254220952|pdb|3DR0|C Chain C, Structure Of Reduced Cytochrome C6 From Synechococcus Sp.
Pcc 7002
Length = 93
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 19/89 (21%)
Query: 81 CIGCHDGGGNVIQPGATL-------FLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCT 133
C CH GG N + P TL +L + E+ + + G+G MP
Sbjct: 14 CAACHAGGNNAVMPTKTLKADALKTYLAGYKDGSKSLEEAVAYQVTNGQGAMP------- 66
Query: 134 PRGQCTFGARLQDEDIKLLAQFVKSQADQ 162
FG RL D DI +A ++ QA+
Sbjct: 67 -----AFGGRLSDADIANVAAYIADQAEN 90
>gi|315225683|ref|ZP_07867490.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
gi|420159352|ref|ZP_14666157.1| cytochrome C [Capnocytophaga ochracea str. Holt 25]
gi|314944346|gb|EFS96388.1| conserved hypothetical protein [Capnocytophaga ochracea F0287]
gi|394762402|gb|EJF44643.1| cytochrome C [Capnocytophaga ochracea str. Holt 25]
Length = 177
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 60 AAVSLAQTVDIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRNGVDTEDEIY 115
A +L QT ++ G L+ C CH DG G ++Q L + + + + TE IY
Sbjct: 83 ATDTLQQTQNLTNGKELYGIYCALCHGEEGDGKGVLVQREKILGVPNYKSREL-TEGSIY 141
Query: 116 HVTYFGKGRMPGF 128
HV Y+G+ MP F
Sbjct: 142 HVLYYGRNTMPAF 154
>gi|65561|pir||CCAI6 cytochrome c6 - Anabaena variabilis (tentative sequence)
Length = 86
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 12/97 (12%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
D G +F C CH GG N+ TL DL++ G + I GK MP
Sbjct: 1 ADSVNGAKIFSANCASCHAGGKNLGVAQKTLKKADLEKYGAYSAMAIGAQVTNGKNAMP- 59
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
F RL+ E+I+ +A +V +A+ W
Sbjct: 60 -----------AFKGRLKPEEIZBVAAYVLGKAEAEW 85
>gi|392390729|ref|YP_006427332.1| cytochrome c, mono- and diheme variants family [Ornithobacterium
rhinotracheale DSM 15997]
gi|390521807|gb|AFL97538.1| cytochrome c, mono- and diheme variants family [Ornithobacterium
rhinotracheale DSM 15997]
Length = 196
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 63 SLAQTVDIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVT 118
SL + D+++G LF QAC+ CH DG G ++ GA L + + + + T ++HV
Sbjct: 106 SLNREQDLKRGEKLFGQACVACHGEKGDGQGPIVVSGAFLGVPNYKDREI-TVGSVHHVI 164
Query: 119 YFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFV 156
+G+ M ++ + D+D +A++V
Sbjct: 165 MYGRNAM------------GSYASHFTDDDRWRVAEYV 190
>gi|402832551|ref|ZP_10881192.1| cytochrome C [Capnocytophaga sp. CM59]
gi|402276778|gb|EJU25878.1| cytochrome C [Capnocytophaga sp. CM59]
Length = 193
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 61 AVSLAQTVDIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRNGVDTEDEIYH 116
A SLA +I++G +L+ C+ CH DG G ++Q L + + + + T+ IYH
Sbjct: 97 ADSLALDSNIKEGAALYNIYCMVCHGAEGDGQGILVQRDKYLGVPNYKDREI-TQGSIYH 155
Query: 117 VTYFGKGRMPGFGEKCTPR 135
V Y+G+ M + + T +
Sbjct: 156 VIYYGRNAMGSYASQITEK 174
>gi|282898253|ref|ZP_06306244.1| Cytochrome c, class I [Raphidiopsis brookii D9]
gi|281196784|gb|EFA71689.1| Cytochrome c, class I [Raphidiopsis brookii D9]
Length = 118
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 67 TVDIQKGVSLFRQACIGCHDGGGNVIQPGATL----FLKDLQRNGVDTEDEIYHVTYFGK 122
+ +I +G ++F C CH GGGN++ TL K L+ D I + GK
Sbjct: 29 SAEISRGHAIFNAECASCHVGGGNILVQNKTLQTSAMKKYLENYDTDPIGGIVNQIQNGK 88
Query: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
MP F K T E+I + +V A+ GW
Sbjct: 89 SAMPAFKNKLT------------KEEILEVGLYVFQMAETGW 118
>gi|86606343|ref|YP_475106.1| cytochrome c-550 [Synechococcus sp. JA-3-3Ab]
gi|123751791|sp|Q2JTY6.1|CY550_SYNJA RecName: Full=Cytochrome c-550; AltName: Full=Cytochrome c550;
AltName: Full=Low-potential cytochrome c; Flags:
Precursor
gi|86554885|gb|ABC99843.1| cytochrome c550 [Synechococcus sp. JA-3-3Ab]
Length = 178
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQ------RNGVDTEDEIYH-VTYFGK 122
+ +G LF +AC CH GG P TL L DL+ N + D I + VTY G
Sbjct: 60 LARGKQLFNRACAQCHVGGQTYPNPDVTLKLSDLEGATPPRDNVLAIVDYIKNPVTYDGV 119
Query: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQ--GW--PKIESMED 172
+ + + L DED+KL+A ++ QA GW K ES D
Sbjct: 120 ESLVEYHPNTQLLSEYPRLRNLTDEDLKLIAGYILVQAKTVPGWGGTKSESHSD 173
>gi|117926|sp|P22343.1|CYC6_EUGVI RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
Length = 87
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 72 KGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGKGRMPGFG 129
G +F C CH GGN+I PG L ++ +G T++ I + GKG MP
Sbjct: 1 SGAEVFGNNCSSCHVNGGNIIIPGHVLSQSAMEEYLDGGYTKEAIEYQVRNGKGPMP--- 57
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
+ L + +IK + +V SQA W
Sbjct: 58 ---------AWEGVLDESEIKEVTDYVYSQASGPW 83
>gi|86157850|ref|YP_464635.1| cytochrome c, class I [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774361|gb|ABC81198.1| cytochrome c, class I [Anaeromyxobacter dehalogenans 2CP-C]
Length = 97
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 13/86 (15%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G ++F Q C CH G G L KDL + +E EI V GKG+M G
Sbjct: 22 GAAVFAQKCAVCHGKDGKGAPAGKALGAKDLTTVKL-SEAEIVKVVENGKGKMTG----- 75
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKS 158
F +L DE +K +A++VK
Sbjct: 76 -------FKGKLSDEQVKSVAKYVKG 94
>gi|87303280|ref|ZP_01086073.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp. WH
5701]
gi|87282175|gb|EAQ74136.1| Cytochrome c, class IC:Cytochrome c, class I [Synechococcus sp. WH
5701]
Length = 118
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 21/130 (16%)
Query: 40 LQKYDTYNVLCLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL- 98
+++ ++ +CL + LG + + D G +F C CH GGGNV+ TL
Sbjct: 6 MRRLLSFFAVCLALLLG-----AAPSFAADAAHGGQIFSANCAACHMGGGNVVNAERTLK 60
Query: 99 ---FLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQF 155
L D E I GK MP F K L + DI ++ +
Sbjct: 61 ADALTAYLANYSSDHEAAIAAQVTVGKNAMPAFLGK------------LTETDIADVSAY 108
Query: 156 VKSQADQGWP 165
V+ A +GW
Sbjct: 109 VEEMAAKGWA 118
>gi|213963256|ref|ZP_03391513.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
gi|213954118|gb|EEB65443.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
Length = 169
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 60 AAVSLAQTVDIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRNGVDTEDEIY 115
A +L QT ++ G +L+ C CH DG G ++Q F +N TE IY
Sbjct: 75 ATDTLQQTQNLTDGKALYGIYCALCHGEKGDGKGILVQ-REKFFGVPNYKNRDFTEGSIY 133
Query: 116 HVTYFGKGRMPGFGEKCTPR 135
HV Y+G+ MP F + + +
Sbjct: 134 HVIYYGRNAMPAFATQLSEK 153
>gi|393780834|ref|ZP_10369040.1| cytochrome C [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392607948|gb|EIW90814.1| cytochrome C [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 177
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 64 LAQTVDIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTY 119
L QT ++ G L+ C CH DG G ++Q L + + + + TE IYHV Y
Sbjct: 87 LQQTQNLTDGKKLYGIYCALCHGEKGDGKGVLVQREKILGVPNYKSREL-TEGSIYHVLY 145
Query: 120 FGKGRMPGFGEKCT 133
+G+ MP F + +
Sbjct: 146 YGRNTMPAFANQLS 159
>gi|429754078|ref|ZP_19286824.1| hypothetical protein HMPREF9073_02802 [Capnocytophaga sp. oral
taxon 326 str. F0382]
gi|429170388|gb|EKY12071.1| hypothetical protein HMPREF9073_02802 [Capnocytophaga sp. oral
taxon 326 str. F0382]
Length = 196
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 60 AAVSLAQTVDIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRNGVDTEDEIY 115
A +L QT ++ G L+ C CH DG G ++Q F +N TE IY
Sbjct: 102 ATDTLQQTQNLTNGKELYGIYCALCHGEKGDGKGVLVQ-REKFFGVPNYKNRDFTEGSIY 160
Query: 116 HVTYFGKGRMPGFG 129
HV Y+G+ MP F
Sbjct: 161 HVIYYGRNAMPAFA 174
>gi|86609971|ref|YP_478733.1| cytochrome c-550 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123751653|sp|Q2JIS8.1|CY550_SYNJB RecName: Full=Cytochrome c-550; AltName: Full=Cytochrome c550;
AltName: Full=Low-potential cytochrome c; Flags:
Precursor
gi|86558513|gb|ABD03470.1| cytochrome c550 [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 180
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 61 AVSLAQTVDI-------QKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQ------RNG 107
AV+L+ T I KG LF AC CH GG P +L L DL+ N
Sbjct: 46 AVALSPTESITFTEAQLAKGKKLFNTACAQCHVGGQTYPNPDVSLKLSDLEGATPPRDNV 105
Query: 108 VDTEDEIYH-VTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQ--GW 164
+ D I + VTY G + + + L DED+KL+A ++ QA GW
Sbjct: 106 LAIVDYIKNPVTYDGVESLLEYHPNTQLTSEYPRLRNLTDEDLKLIAGYILVQAKTVPGW 165
Query: 165 --PKIESMED 172
K ES D
Sbjct: 166 GGTKNESHSD 175
>gi|322418931|ref|YP_004198154.1| cytochrome c class I [Geobacter sp. M18]
gi|320125318|gb|ADW12878.1| cytochrome c class I [Geobacter sp. M18]
Length = 135
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G LF+Q C CH GGN I P TL K L + + ++I V M F E
Sbjct: 58 GEQLFKQHCAVCHPNGGNTISPSKTLSAKALTASKITKPEDIVKVMRNPGPGMSKFDE-- 115
Query: 133 TPRGQCTFGARLQDEDIKLLAQFV 156
A + ++D K + +++
Sbjct: 116 ---------AMISNDDAKKIGEYI 130
>gi|419801697|ref|ZP_14326912.1| cytochrome C-553 family protein [Haemophilus parainfluenzae HK262]
gi|419844333|ref|ZP_14367624.1| cytochrome C-553 family protein [Haemophilus parainfluenzae HK2019]
gi|385193304|gb|EIF40682.1| cytochrome C-553 family protein [Haemophilus parainfluenzae HK262]
gi|386417458|gb|EIJ31937.1| cytochrome C-553 family protein [Haemophilus parainfluenzae HK2019]
Length = 107
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 51 LPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDT 110
LPV L F A +L+ D+ K +++++C CH G G + + L+ + T
Sbjct: 12 LPV-LNFLFATSALSAEADLVKAEKVYKRSCATCHGKQGEKPAMGESKIINQLKPEEIST 70
Query: 111 EDEIYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKS 158
++ G++ G G P Q RL DEDI+ L++++K+
Sbjct: 71 -----ALSERKMGKIIGAG---NPAKQ-----RLSDEDIRNLSEYIKN 105
>gi|334119046|ref|ZP_08493133.1| photosystem II cytochrome PsbV2 [Microcoleus vaginatus FGP-2]
gi|333458517|gb|EGK87134.1| photosystem II cytochrome PsbV2 [Microcoleus vaginatus FGP-2]
Length = 166
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D+ G LF Q+C+ CH GG N+ P +L L DL + + I + + + M
Sbjct: 63 DLSAGKVLFEQSCLNCHVGGANLPDPMISLSLADL-KGATPPRNNINSLVAYLREPMTYD 121
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFV--KSQADQGWPKIESMED 172
G + T + + + +I+ LA FV +Q GW +E+ E
Sbjct: 122 GTEETFWCRQVPESWMPQAEIENLAAFVIRAAQKAPGW-GVENFES 166
>gi|256820250|ref|YP_003141529.1| hypothetical protein Coch_1422 [Capnocytophaga ochracea DSM 7271]
gi|256581833|gb|ACU92968.1| conserved hypothetical protein [Capnocytophaga ochracea DSM 7271]
Length = 177
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 60 AAVSLAQTVDIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRNGVDTEDEIY 115
A +L Q ++ G L+ C CH DG G ++Q L + + + + TE IY
Sbjct: 83 ATDTLQQIQNLTDGKKLYGIYCALCHGEKGDGKGVLVQREKILGVPNYKSREL-TEGSIY 141
Query: 116 HVTYFGKGRMPGFGEKCT 133
HV Y+G+ MP F + +
Sbjct: 142 HVLYYGRNTMPAFANQLS 159
>gi|428319641|ref|YP_007117523.1| photosystem II cytochrome PsbV2 [Oscillatoria nigro-viridis PCC
7112]
gi|428243321|gb|AFZ09107.1| photosystem II cytochrome PsbV2 [Oscillatoria nigro-viridis PCC
7112]
Length = 166
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D+ G LF Q C+ CH GG N+ P +L L DL + + I + + + M
Sbjct: 63 DLSAGKVLFEQNCLNCHVGGANLPDPTVSLSLADL-KGATPPRNNINSLVAYLRKPMTYD 121
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFV--KSQADQGW 164
G + T + + + +I+ LA FV +Q GW
Sbjct: 122 GTEETFWCREVPESWMPQAEIENLAAFVIRAAQKAPGW 159
>gi|197122840|ref|YP_002134791.1| cytochrome C class I [Anaeromyxobacter sp. K]
gi|196172689|gb|ACG73662.1| cytochrome c class I [Anaeromyxobacter sp. K]
Length = 97
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G ++F + C CH G G L KDL + +E EI V GKG+M G
Sbjct: 22 GAAVFAKKCAVCHGKDGKGAPAGKALGAKDLTTVKL-SEAEIVKVVENGKGKMTG----- 75
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVK 157
F +L D+++K +A++VK
Sbjct: 76 -------FKGKLSDDEVKSVAKYVK 93
>gi|729268|sp|Q09099.1|CYC6_MONBR RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-552;
AltName: Full=Cytochrome c-553; AltName: Full=Cytochrome
c553; AltName: Full=Soluble cytochrome f
gi|157830579|pdb|1CED|A Chain A, The Structure Of Cytochrome C6 From Monoraphidium Braunii,
Nmr, Minimized Average Structure
gi|157830714|pdb|1CTJ|A Chain A, Crystal Structure Of Cytochrome C6
Length = 89
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATL---FLKDLQRNGVDTEDEIYHVTYFGKGR 124
D+ G ++F C CH GGGN + P TL ++ G + E +Y + GKG
Sbjct: 2 ADLALGKAVFDGNCAACHAGGGNNVIPDHTLQKAAIEQFLDGGFNIEAIVYQIEN-GKGA 60
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQA 160
MP + RL +++I +A +V QA
Sbjct: 61 MP------------AWDGRLDEDEIAGVAAYVYDQA 84
>gi|332710375|ref|ZP_08430323.1| photosystem II cytochrome PsbV2 [Moorea producens 3L]
gi|332350924|gb|EGJ30516.1| photosystem II cytochrome PsbV2 [Moorea producens 3L]
Length = 232
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D+ G+ LF Q C CH GG N+I P +L L+ L D + + F + M
Sbjct: 130 DLSVGIKLFSQNCQRCHVGGANLIDPTVSLSLEKLA-GAKPPRDNLNGLVAFMRQPMTYD 188
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQG 163
GE + + + L E I+ LA FV A +G
Sbjct: 189 GEDESFWCREVPESWLSQEKIEKLAAFVIRAAQKG 223
>gi|157829658|pdb|1A2S|A Chain A, The Solution Nmr Structure Of Oxidized Cytochrome C6 From
The Green Alga Monoraphidium Braunii, Minimized Average
Structure
Length = 89
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATL---FLKDLQRNGVDTEDEIYHVTYFGKGR 124
D+ G ++F C CH GGGN + P TL ++ G + E +Y + GKG
Sbjct: 2 ADLALGKAVFDGNCAACHAGGGNNVIPDHTLQKAAIEQFLDGGFNIEAIVYQIEN-GKGA 60
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQA 160
MP + RL +++I +A +V QA
Sbjct: 61 MP------------AWDGRLDEDEIAGVAAYVYDQA 84
>gi|32307470|gb|AAP79140.1| cytochrome C6 [Bigelowiella natans]
Length = 165
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 14/88 (15%)
Query: 75 SLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGKGRMPGFGEKC 132
S+F C CH GGGN I G TL +++ +G ++ I + GKG MP
Sbjct: 82 SIFETNCGACHQGGGNNIITGHTLSKTAMEQYLDGGWNKESIEYQIRNGKGPMPA----- 136
Query: 133 TPRGQCTFGARLQDEDIKLLAQFVKSQA 160
+ L DE+IK + ++V Q+
Sbjct: 137 -------WEGVLSDEEIKAMTEWVYEQS 157
>gi|307102674|gb|EFN50943.1| hypothetical protein CHLNCDRAFT_28519 [Chlorella variabilis]
Length = 99
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 16/102 (15%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR---NGVDTEDEIYHVTYFGKGR 124
D+ G +F C CH GG N +Q TL L++ G + IY V GK
Sbjct: 1 ADLALGEEVFSNNCAACHMGGNNSVQVEKTLRKAALEQYLEGGFNQPAIIYQVEN-GKNA 59
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPK 166
MP +G+ RL +E+I+ +A +V Q G K
Sbjct: 60 MPAWGD------------RLSEEEIEAVAAYVFKQVRVGRRK 89
>gi|197117972|ref|YP_002138399.1| lipoprotein cytochrome c [Geobacter bemidjiensis Bem]
gi|197087332|gb|ACH38603.1| lipoprotein cytochrome c, 1 heme-binding site [Geobacter
bemidjiensis Bem]
Length = 134
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G LF+ C CH GGN I P TL K + + + D+I + M F E
Sbjct: 57 GEQLFKLHCAACHPNGGNTITPAKTLSKKAMADRNIKSTDDIVKIMRNPGPGMNKFDEGM 116
Query: 133 TPR 135
P+
Sbjct: 117 IPK 119
>gi|22298827|ref|NP_682074.1| cytochrome c-550 [Thermosynechococcus elongatus BP-1]
gi|75463734|sp|Q9ET95.1|PSBV2_THEVL RecName: Full=Cytochrome c-550-like protein; Flags: Precursor
gi|81743127|sp|Q8DJE2.1|PSBV2_THEEB RecName: Full=Cytochrome c-550-like protein; Flags: Precursor
gi|12039018|dbj|BAB20060.1| cytochrome c550 like protein [Thermosynechococcus elongatus]
gi|12039023|dbj|BAB20064.1| cytochrome c550 like protein [Thermosynechococcus vulcanus]
gi|22295008|dbj|BAC08836.1| cytochrome c550 like protein [Thermosynechococcus elongatus BP-1]
Length = 175
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 68 VDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPG 127
VD+ +G LF + C CH GG + P +L LKDL + D I + F +
Sbjct: 68 VDLTRGKRLFEENCKNCHVGGSTLPNPLVSLSLKDL-KGATPPRDTIASLVAFQRSPKSY 126
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQA--DQGWPKIESMED 172
G + + + L E ++ LA F+ A GW +ES D
Sbjct: 127 DGSEESYSCRRVSEDWLTTEQLETLAAFILRAAAVAPGW-GVESFPD 172
>gi|322419579|ref|YP_004198802.1| cytochrome c class I [Geobacter sp. M18]
gi|320125966|gb|ADW13526.1| cytochrome c class I [Geobacter sp. M18]
Length = 110
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G + F Q C CH GGN++ L K L NGV TE +I K R PG
Sbjct: 33 GKAKFDQHCASCHPKGGNIVNAQKGLSKKALAANGVKTEKDI-----VAKMRNPG----- 82
Query: 133 TPRGQCTFGAR-LQDEDIKLLAQFV 156
G F A+ + D + +A+++
Sbjct: 83 --PGMTKFDAKTVPDAEANAIAKYI 105
>gi|395761649|ref|ZP_10442318.1| putative diheme cytochrome c-553 [Janthinobacterium lividum PAMC
25724]
Length = 424
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTY-FGKGRMPGFGEK 131
G L+R C CH G + P + + + T+ + + G PG
Sbjct: 318 GEKLYRAQCASCHQADGKGVPPD---YPPLAGKRALTTDSAVNAIRLVLNGGFAPGTSSN 374
Query: 132 CTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESME 171
P G FGA + D +I + +V++ P + ++E
Sbjct: 375 PRPYGMPPFGAAMDDAEIAAVVTYVRASWGNNAPAVSALE 414
>gi|12230017|sp|P57736.1|CYC6_SCEOB RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
gi|7767092|pdb|1C6O|A Chain A, Crystal Structure Of Oxidized Cytochrome C6 From The Green
Algae Scenedesmus Obliquus
gi|7767093|pdb|1C6O|B Chain B, Crystal Structure Of Oxidized Cytochrome C6 From The Green
Algae Scenedesmus Obliquus
gi|7767094|pdb|1C6R|A Chain A, Crystal Structure Of Reduced Cytochrome C6 From The Green
Algae Scenedesmus Obliquus
Length = 89
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 16/97 (16%)
Query: 67 TVDIQKGVSLFRQACIGCHDGGGNVIQPGATL---FLKDLQRNGVDTEDEIYHVTYFGKG 123
+ D+ G F C CH GG N + P TL ++ + G + E Y V GKG
Sbjct: 1 SADLALGKQTFEANCAACHAGGNNSVIPDHTLRKAAMEQFLQGGFNLEAITYQVEN-GKG 59
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQA 160
MP + L D++I +A +V QA
Sbjct: 60 AMP------------AWSGTLDDDEIAAVAAYVYDQA 84
>gi|253700665|ref|YP_003021854.1| cytochrome C [Geobacter sp. M21]
gi|251775515|gb|ACT18096.1| cytochrome c, class I [Geobacter sp. M21]
Length = 111
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 10/84 (11%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A+ D G + F Q C CH GGN+I+ L K L +G+ +E +I K R
Sbjct: 26 AKKADKVDGKAKFDQHCAVCHPKGGNIIKSDRPLGKKSLAAHGIKSEKDI-----VAKMR 80
Query: 125 MPG-----FGEKCTPRGQCTFGAR 143
PG F K P + T A+
Sbjct: 81 NPGPSMTKFDAKAVPDAEATAIAK 104
>gi|27530930|dbj|BAC54100.1| precursor cytochrome c6 [Chlorella vulgaris]
Length = 139
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 16/96 (16%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR---NGVDTEDEIYHVTYFGKGRM 125
D+ G +F C CH GG N +QP TL L++ G I V GKG M
Sbjct: 53 DLTLGQQVFDNNCAACHMGGQNSVQPEKTLQKAALEQYLEGGFSVASIITQVEN-GKGAM 111
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQAD 161
P + RL ++I+ +A++V QA+
Sbjct: 112 P------------AWSGRLDSDEIESVAEYVFKQAE 135
>gi|392954811|ref|ZP_10320362.1| cytochrome c [Hydrocarboniphaga effusa AP103]
gi|391857468|gb|EIT67999.1| cytochrome c [Hydrocarboniphaga effusa AP103]
Length = 428
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
+++G L+R+ C CH G P A + + + I + FG G PG
Sbjct: 319 MERGADLYRRHCADCHGDAGEGHAPVAPALAGNRALSMSSAVNSI-RIIRFG-GYEPGTE 376
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFVK-SQADQGWPKIES 169
P G FG RL D++I + F++ S + G P E+
Sbjct: 377 GNPRPFGMPPFGTRLGDDEIADVLTFIRASWGNHGRPVSET 417
>gi|374329710|ref|YP_005079894.1| Diheme cytochrome c SoxE [Pseudovibrio sp. FO-BEG1]
gi|359342498|gb|AEV35872.1| Diheme cytochrome c SoxE [Pseudovibrio sp. FO-BEG1]
Length = 245
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 53 VSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNV 91
V+LGF AVS+A DI +G LF AC+ CHD G +
Sbjct: 22 VALGFLSGAVSIASAQDIARGERLF-NACLRCHDVGKDA 59
>gi|404495008|ref|YP_006719114.1| cytochrome c [Geobacter metallireducens GS-15]
gi|418066098|ref|ZP_12703465.1| cytochrome c, class I [Geobacter metallireducens RCH3]
gi|78192635|gb|ABB30402.1| cytochrome c [Geobacter metallireducens GS-15]
gi|373561032|gb|EHP87276.1| cytochrome c, class I [Geobacter metallireducens RCH3]
Length = 110
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKC 132
G F++ C CH GGN++ P L L+ NGV T +I K R PG
Sbjct: 33 GAKEFKEHCAVCHPDGGNIVNPAKPLKKATLEANGVKTWKDI-----VAKMRNPG----- 82
Query: 133 TPRGQCTFGAR-LQDEDIKLLAQFV 156
G F + + D++ + +A++V
Sbjct: 83 --PGMTKFEKKDVSDKEARAIAEYV 105
>gi|193875792|gb|ACF24532.1| cytochrome C6 precursor [Gymnochlora stellata]
Length = 156
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 17/115 (14%)
Query: 56 GFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDE 113
G AA +A+ VD ++F C CH GGGN I G TL +++ +G ++
Sbjct: 57 GGILAATRMARAVD---PTNIFETNCGACHQGGGNNIITGHTLSKTAMEQYLDGGWNKEA 113
Query: 114 IYHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIE 168
I + GKG MP + L +E+IK + +V Q+ + I
Sbjct: 114 IEYQIRNGKGPMPA------------WEGVLSEEEIKAMTDWVYEQSTTAFKDIN 156
>gi|317491386|ref|ZP_07949822.1| cytochrome c [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920933|gb|EFV42256.1| cytochrome c [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 442
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 61 AVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGV---DTEDEIYHV 117
A +L + D + G +L+ C CH G+ G T F +L+ N V D + HV
Sbjct: 304 ANALWKGDDSKTGAALYVDNCAACHRTDGS----GYTRFFPELRGNPVVMTDDATSLIHV 359
Query: 118 TYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESME 171
G +PG + FG RL D+ + + F+++ P+I + +
Sbjct: 360 VLTGN-TLPGVQGAPSSITMPAFGWRLNDQQVADVVNFIRTSWGNKAPEITAKD 412
>gi|365837912|ref|ZP_09379269.1| gluconate 2-dehydrogenase cytochrome c subunit [Hafnia alvei ATCC
51873]
gi|364561103|gb|EHM39017.1| gluconate 2-dehydrogenase cytochrome c subunit [Hafnia alvei ATCC
51873]
Length = 442
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 61 AVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGV---DTEDEIYHV 117
A +L + D + G +L+ C CH G+ G T F +L+ N V D + HV
Sbjct: 304 ANALWKGDDSKTGAALYVDNCAACHRTDGS----GYTRFFPELRGNPVVMTDDATSLIHV 359
Query: 118 TYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESME 171
G +PG + FG RL D+ + + F+++ P+I + +
Sbjct: 360 VLTGN-TLPGVQGAPSSITMPAFGWRLNDQQVADVVNFIRTSWGNKAPEITAKD 412
>gi|5541758|emb|CAB51077.1| cytochrome c6 precursor [Euglena gracilis]
Length = 176
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGKGRMPGFGE 130
G +F C CH GGNVI G L ++ +G T++ I + GKG MP
Sbjct: 91 GADVFADNCSTCHVNGGNVISAGKVLSKTAIEEYLDGGYTKEAIEYQVRNGKGPMP---- 146
Query: 131 KCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKI 167
+ L +++I + +V +QA W +
Sbjct: 147 --------AWEGVLSEDEIVAVTDYVYTQAGGAWANV 175
>gi|212558351|gb|ACJ30805.1| Cytochrome c, class I [Shewanella piezotolerans WP3]
Length = 721
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 65 AQTVDIQKGVSLFRQACIGCH-DGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFG-K 122
A V I G +F Q C CH DG I+ GA + D+ +G E EI H FG
Sbjct: 206 APQVKIDLGKEIFVQYCSSCHGDGTVANIEIGAPVLSDDIWLHGGSIE-EIEHTIEFGLN 264
Query: 123 GRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFV 156
MP F E+ + GA + ++ ++ A+
Sbjct: 265 NLMPAFSEQLSRNEILAIGAYITEQRLRYDAKLA 298
>gi|402566985|ref|YP_006616330.1| cytochrome c [Burkholderia cepacia GG4]
gi|402248182|gb|AFQ48636.1| cytochrome c [Burkholderia cepacia GG4]
Length = 458
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 38/99 (38%), Gaps = 8/99 (8%)
Query: 62 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDE---IYHVT 118
+L V G L+ C CH G+ GA L N V T D+ + HV
Sbjct: 316 AALRSGVTPTGGALLYLNNCNACHRSDGS----GAMKAFPALAGNAVVTSDDPSSVIHVI 371
Query: 119 YFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVK 157
G RMP P FG RL D + LA FV+
Sbjct: 372 LTGS-RMPSTRSDPAPLAMPAFGWRLSDLQVAELATFVR 409
>gi|117925|sp|P00119.1|CYC6_EUGGR RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-552;
AltName: Full=Cytochrome c-553; AltName: Full=Cytochrome
c553; AltName: Full=Soluble cytochrome f
Length = 87
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGKGRMPGFGE 130
G +F C CH GGNVI G L ++ +G T++ I + GKG MP
Sbjct: 2 GADVFADNCSTCHVNGGNVISAGKVLSKTAIEEYLDGGYTKEAIEYQVRNGKGPMP---- 57
Query: 131 KCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKI 167
+ L +++I + +V +QA W +
Sbjct: 58 --------AWEGVLSEDEIVAVTDYVYTQAGGAWANV 86
>gi|219122389|ref|XP_002181528.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406804|gb|EEC46742.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 154
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 11/99 (11%)
Query: 62 VSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFG 121
+S D+ G LF+ C GCH GG N + TL T++ + +
Sbjct: 62 ISATAAADVGNGSELFKANCAGCHAGGANFLAEKKTL-----------TKEALENFQSLD 110
Query: 122 KGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQA 160
+ ++ F + P F ++ D D + +V QA
Sbjct: 111 QQKLQDFVQNKMPHKFLPFKSQFSDSDYSDVTSYVLDQA 149
>gi|254473662|ref|ZP_05087058.1| cytochrome c2 [Pseudovibrio sp. JE062]
gi|211957374|gb|EEA92578.1| cytochrome c2 [Pseudovibrio sp. JE062]
Length = 245
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 53 VSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCHDGG 88
V+LGF AVS+A D+ +G LF AC+ CHD G
Sbjct: 22 VALGFLSGAVSIASAQDVARGERLF-NACLRCHDVG 56
>gi|384250226|gb|EIE23706.1| cytochrome c6, partial [Coccomyxa subellipsoidea C-169]
Length = 89
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 12/96 (12%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
A D+ G +F C CH GG NV+Q TL L + + + GK
Sbjct: 1 AGAADLSAGEEVFSNNCAACHTGGANVVQAEKTLQKDALVAHWCFADMLLSAQVTNGKNA 60
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQA 160
MP + RL +++I+ +A +V QA
Sbjct: 61 MP------------AWAGRLSEDEIQDVAAYVYDQA 84
>gi|298490297|ref|YP_003720474.1| cytochrome c class I ['Nostoc azollae' 0708]
gi|298232215|gb|ADI63351.1| cytochrome c class I ['Nostoc azollae' 0708]
Length = 125
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 16/104 (15%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATL----FLKDLQRNGVDTEDEIYHVTYF 120
A + G +F C CH GG N++ TL K L+ ++ I +
Sbjct: 34 ALAAETSNGSKIFNANCAACHIGGANILVEHKTLQKSGLSKYLENYEIEPIQAIINQIQN 93
Query: 121 GKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGW 164
GK MP F K L +++I + ++ +A+ GW
Sbjct: 94 GKSAMPAFKNK------------LSEQEILEVTAYIFQKAETGW 125
>gi|317128331|ref|YP_004094613.1| cytochrome C class I [Bacillus cellulosilyticus DSM 2522]
gi|315473279|gb|ADU29882.1| cytochrome c class I [Bacillus cellulosilyticus DSM 2522]
Length = 124
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
I+ G ++ Q CI CH GG++ G+ + L+ GV +E+EI + + G G MP F
Sbjct: 51 IELGEYVYEQNCINCH--GGDLAGVGSNPAINGLE--GVKSEEEIVAIIHEGPGAMPAF 105
>gi|317046583|ref|YP_004114231.1| gluconate 2-dehydrogenase [Pantoea sp. At-9b]
gi|316948200|gb|ADU67675.1| Gluconate 2-dehydrogenase (acceptor) [Pantoea sp. At-9b]
Length = 439
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 59 HAAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGV---DTEDEIY 115
+ A +L + D Q G S++ +C CH G+ G F L+ N V D +
Sbjct: 303 NVAQALWKGDDSQPGASVYVDSCAACHKTDGS----GYQRFFPALRGNPVVLADDPTSLI 358
Query: 116 HVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQG 163
H+ G G +PG T FG RL D+ + + F++ G
Sbjct: 359 HIVLTG-GTLPGVQGAPTAITMPAFGWRLNDQQVADVVNFIRGSWGNG 405
>gi|325955357|ref|YP_004239017.1| cytochrome C class I [Weeksella virosa DSM 16922]
gi|323437975|gb|ADX68439.1| cytochrome c class I [Weeksella virosa DSM 16922]
Length = 222
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 66 QTVDIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFG 121
+ VD ++G L++Q C CH DG G++++ A + + T +YHV +G
Sbjct: 111 KEVDHKRGELLYKQNCSVCHGANGDGQGSIVKSKAYSGVPTFAERNI-TVGSVYHVIMYG 169
Query: 122 KGRMPGFGEKCTP 134
K M + TP
Sbjct: 170 KNAMGSYASHLTP 182
>gi|86606342|ref|YP_475105.1| cytochrome c-550 [Synechococcus sp. JA-3-3Ab]
gi|123724572|sp|Q2JTY7.1|PSBV2_SYNJA RecName: Full=Cytochrome c-550-like protein; Flags: Precursor
gi|86554884|gb|ABC99842.1| putative cytochrome [Synechococcus sp. JA-3-3Ab]
Length = 174
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFG 129
+ G + F+ AC+ CH GG + P +L LKDL R D I + + + G
Sbjct: 71 LTDGKNRFQSACLNCHVGGSTLPAPNISLSLKDL-RGATPPRDTIQALVEYQRDPRSYDG 129
Query: 130 EKCTPRGQCTFGARLQDEDIKLLAQFV--KSQADQGW 164
+ + + + + DE ++ LA F+ +Q GW
Sbjct: 130 TEVSYGCRPVPPSWMDDEALRNLAAFILRAAQVAPGW 166
>gi|427722457|ref|YP_007069734.1| Cytochrome c6 [Leptolyngbya sp. PCC 7376]
gi|427354177|gb|AFY36900.1| Cytochrome c6 [Leptolyngbya sp. PCC 7376]
Length = 117
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 19/97 (19%)
Query: 73 GVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRN-------GVDTEDEIYHVTYFGKGRM 125
G +F C CH GG N + P TL L+ N D I + GK M
Sbjct: 30 GEQVFTANCNACHIGGNNAVMPPKTLKEDALKANLEGYKDGSKSLADAIAYQVENGKNAM 89
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQ 162
P FG RL + I +A +V QA+
Sbjct: 90 PA------------FGGRLPADQIANVAAYVADQAEN 114
>gi|381151725|ref|ZP_09863594.1| cytochrome c oxidase, subunit II [Methylomicrobium album BG8]
gi|380883697|gb|EIC29574.1| cytochrome c oxidase, subunit II [Methylomicrobium album BG8]
Length = 507
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 60 AAVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTY 119
+A S ++ I KG +++ C+ CH GG + P NG D +++I +
Sbjct: 403 SAPSSSKEALIAKGKTVYESRCVSCHQAGGQGLPPTFPALTGSDVVNG-DIKEQI-DLMK 460
Query: 120 FGKGRMPGFGEKCTPR 135
GKG MP FG +P
Sbjct: 461 AGKGMMPAFGGTLSPE 476
>gi|408673158|ref|YP_006872906.1| cytochrome c family protein [Emticicia oligotrophica DSM 17448]
gi|387854782|gb|AFK02879.1| cytochrome c family protein [Emticicia oligotrophica DSM 17448]
Length = 204
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 71 QKGVSLFRQACIGCH------DGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
++G L+ + C+ CH DG + G + D +N D IYHV FGKGR
Sbjct: 120 EEGKVLYERNCLHCHGEKGAGDGPVGKVYKGVPNYAADAYKNMND--GHIYHVITFGKGR 177
Query: 125 MPGFGEKCTP 134
M + P
Sbjct: 178 MWAHASQVNP 187
>gi|220917622|ref|YP_002492926.1| cytochrome c class I [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955476|gb|ACL65860.1| cytochrome c class I [Anaeromyxobacter dehalogenans 2CP-1]
Length = 97
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 76 LFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
+F + C CH G G L KDL + +E EI V GKG+M G
Sbjct: 25 VFAKKCAVCHGKDGKGAPAGKALGAKDLTTVKL-SEAEIVKVVENGKGKMTG-------- 75
Query: 136 GQCTFGARLQDEDIKLLAQFVK 157
F +L D+++K +A++VK
Sbjct: 76 ----FKGKLSDDEVKSVAKYVK 93
>gi|68159418|gb|AAY86372.1| cytochrome c-552 Ks_3357 [Candidatus Kuenenia stuttgartiensis]
gi|91203654|emb|CAJ71307.1| similar to cytochrome c-553 [Candidatus Kuenenia stuttgartiensis]
Length = 121
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 75 SLFRQACIGCHDGGGNVIQPGATLFLKDLQRNG---VDTEDEIYHVTYFGKGRMPGFGEK 131
+LF C CH G + G L DL G T+ EI + GK +MP + E+
Sbjct: 41 NLFEYHCAKCHGLTGEANKRGKALKAPDLCDPGWQNSKTDKEILYSITNGKNKMPAWNER 100
Query: 132 CTPRGQCTFGARLQDEDIKLLAQFVK 157
TP E+I+ LA++V+
Sbjct: 101 LTP------------EEIEALARYVR 114
>gi|425900072|ref|ZP_18876663.1| cytochrome c family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397889400|gb|EJL05882.1| cytochrome c family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 421
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 4/100 (4%)
Query: 66 QTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRM 125
+ V+ G LF+ AC GCH + Q L + G
Sbjct: 310 EVVEQAPGAQLFQSACAGCHGPAAPMRQIDGRPALARTSALHASSARNFLKTVLEGVSAT 369
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
PG P F A L ++ + +LA F++ QA G P
Sbjct: 370 PGLPGPVMP----PFAASLDNQQLAVLASFLREQASPGQP 405
>gi|113476288|ref|YP_722349.1| cytochrome c-550 [Trichodesmium erythraeum IMS101]
gi|123160700|sp|Q111E8.1|PSBV2_TRIEI RecName: Full=Cytochrome c-550-like protein; Flags: Precursor
gi|110167336|gb|ABG51876.1| cytochrome c550 like protein [Trichodesmium erythraeum IMS101]
Length = 165
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGF 128
D+ +G F + C+ CH GG N++ P +L L+ L + D++ ++ F + M
Sbjct: 63 DLSEGKQTFAKNCLNCHVGGANLVNPSVSLSLEKL-KGATPPRDDLNNLVAFLRDPMIYD 121
Query: 129 GEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQG 163
G T + + ++++ +A F+ A +
Sbjct: 122 GSSYTLFCRQITENWMSQQEVENIAAFILRAAQKA 156
>gi|312113061|ref|YP_004010657.1| cytochrome-c peroxidase [Rhodomicrobium vannielii ATCC 17100]
gi|311218190|gb|ADP69558.1| Cytochrome-c peroxidase [Rhodomicrobium vannielii ATCC 17100]
Length = 343
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 26/123 (21%)
Query: 71 QKGVSLFR-QACIGCHDG---GGN------VIQ-PGATLF-LKDLQRNGVD---TEDEIY 115
+KG+ LF + C CH+G GGN VIQ PGA + L D R V +++ ++
Sbjct: 207 KKGLRLFMDKGCAACHNGINVGGNGYYPFGVIQKPGAEILPLGDKGRFAVSKTASDEYVF 266
Query: 116 HVT----------YFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
YF G++ + G G +L DED KL+ F+K+ + P
Sbjct: 267 RAAPLRNVALRAPYFHSGQVWSLEQAVAVMGDSQLGEKLTDEDTKLIVAFLKTLTGE-QP 325
Query: 166 KIE 168
++E
Sbjct: 326 RVE 328
>gi|171060784|ref|YP_001793133.1| cytochrome c class I [Leptothrix cholodnii SP-6]
gi|170778229|gb|ACB36368.1| cytochrome c class I [Leptothrix cholodnii SP-6]
Length = 124
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 65 AQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGR 124
AQ D KG L+R C GCH G G + P A F + D + G+G
Sbjct: 43 AQAADTVKGAELYRLHCAGCHGGDGRPVMPMAPDFSRPTTLLKPDL--TLLAAIRNGRGA 100
Query: 125 MPGF 128
MP +
Sbjct: 101 MPAY 104
>gi|297562075|ref|YP_003681049.1| cytochrome C class I [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296846523|gb|ADH68543.1| cytochrome c class I [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 311
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 65 AQTVDIQKGVSLFRQACIGCH--DGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGK 122
A VD+ G +F Q C CH DG G+ + G D++ +G D + V+
Sbjct: 52 ADEVDVANGEDIFNQTCATCHNYDGSGSYGEDGEYTRGPDIRDSGAAAVD--FQVS---T 106
Query: 123 GRMPGFGEKC-TPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKI 167
GRMP PR + +ED++ L + +Q G P I
Sbjct: 107 GRMPSMNPDAQMPRKPMA----MSEEDLQDLIAYYNAQIRTGGPDI 148
>gi|410457432|ref|ZP_11311242.1| putative pyrrolo-quinoline quinone [Bacillus bataviensis LMG 21833]
gi|409925177|gb|EKN62401.1| putative pyrrolo-quinoline quinone [Bacillus bataviensis LMG 21833]
Length = 749
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 22/92 (23%)
Query: 69 DIQKGVSLFRQACIGCH--DGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMP 126
++ G S+++ C+ CH +G G P +LQ+ +D + I VT GKG+MP
Sbjct: 674 NVSAGESIYKNNCLACHGAEGAGGHNGP-------NLQKTKMDLDAIIKQVTN-GKGQMP 725
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKS 158
F + L ++IK +A++VKS
Sbjct: 726 PFKDT------------LSADEIKSVAEYVKS 745
>gi|381406000|ref|ZP_09930684.1| gluconate 2-dehydrogenase [Pantoea sp. Sc1]
gi|380739199|gb|EIC00263.1| gluconate 2-dehydrogenase [Pantoea sp. Sc1]
Length = 436
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 61 AVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGV---DTEDEIYHV 117
A +L + D Q G + + +C CH G+ G F L+ N V D + H+
Sbjct: 304 AKALWRGDDSQTGAAAYVDSCAACHKTDGS----GYKRFYPALRGNPVVLADDPTSLIHI 359
Query: 118 TYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQ 159
G G++PG + FG RL D+ + + FV++
Sbjct: 360 VLVG-GQLPGVNGAPSTITMPAFGWRLNDQQVADVVNFVRNS 400
>gi|304398486|ref|ZP_07380359.1| Gluconate 2-dehydrogenase (acceptor) [Pantoea sp. aB]
gi|304353991|gb|EFM18365.1| Gluconate 2-dehydrogenase (acceptor) [Pantoea sp. aB]
Length = 436
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 61 AVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGV---DTEDEIYHV 117
A +L + D Q G + + +C CH G+ G F L+ N V D + H+
Sbjct: 304 AKALWRGDDSQTGAATYVDSCAACHKTDGS----GYKRFYPALRGNPVVLADDPTSLIHI 359
Query: 118 TYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQ 159
G G++PG + FG RL D+ + + FV++
Sbjct: 360 VLVG-GQLPGVNGAPSTITMPAFGWRLNDQQVADVVNFVRNS 400
>gi|308188998|ref|YP_003933129.1| gluconate 2-dehydrogenase [Pantoea vagans C9-1]
gi|308059508|gb|ADO11680.1| Gluconate 2-dehydrogenase cytochrome c subunit precursor [Pantoea
vagans C9-1]
Length = 436
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 61 AVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDE---IYHV 117
A +L + D Q G + + +C CH G+ G F L+ N V D+ + H+
Sbjct: 304 AKALWRGDDSQTGAATYVDSCAACHKTDGS----GYKRFYPALRGNPVVMADDPTSLIHI 359
Query: 118 TYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQ 159
G G++PG + FG RL D+ + + FV++
Sbjct: 360 VLVG-GQLPGVNGAPSTITMPAFGWRLNDQQVADVVNFVRNS 400
>gi|398793204|ref|ZP_10553678.1| cytochrome c, mono- and diheme variants family [Pantoea sp. YR343]
gi|398211271|gb|EJM97892.1| cytochrome c, mono- and diheme variants family [Pantoea sp. YR343]
Length = 439
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGV---DTEDEIYHVTYFGKGRM 125
D Q G S + +C CH G+ G F L+ N V D + H+ G G +
Sbjct: 313 DSQPGASTYVDSCAACHKTDGS----GYQRFYPALRGNPVVMADDPTSLIHIVLVG-GTL 367
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESMED 172
PG T FG RL D+ + + F++ G S +D
Sbjct: 368 PGVQGAPTAITMPAFGWRLNDQQVADVVNFIRGSWGNGVKSSVSAKD 414
>gi|407976252|ref|ZP_11157153.1| gluconate 2-dehydrogenase (acceptor) [Nitratireductor indicus C115]
gi|407428427|gb|EKF41110.1| gluconate 2-dehydrogenase (acceptor) [Nitratireductor indicus C115]
Length = 438
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 60 AAVSLAQTVD--IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEI--- 114
A +L + D + G L+ C CH G GA +L N + T D++
Sbjct: 319 ATTALLNSADPSMDLGPRLYLDNCGACHFTNGK----GADGVFPELDGNSLVTADQVTGL 374
Query: 115 YHVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVK 157
HV G R+P E+ FG RL DE++ LA F++
Sbjct: 375 LHVILNGS-RLPSTRERPADLAMPGFGKRLSDEEVAALATFLR 416
>gi|398798902|ref|ZP_10558199.1| cytochrome c, mono- and diheme variants family [Pantoea sp. GM01]
gi|398099725|gb|EJL89977.1| cytochrome c, mono- and diheme variants family [Pantoea sp. GM01]
Length = 439
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 8/115 (6%)
Query: 61 AVSLAQTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDE---IYHV 117
A +L + D Q G S + +C CH G+ G F L+ N V D+ + H+
Sbjct: 305 ARALWKGDDSQPGASTYVDSCAACHKTDGS----GYQRFYPALRGNPVVMADDPTSLIHI 360
Query: 118 TYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIESMED 172
G G +PG T FG R+ D+ + + F++ G S +D
Sbjct: 361 VLVG-GTLPGVQGAPTAITMPAFGWRMNDQQVADVVNFIRGSWGNGVKSSVSAKD 414
>gi|429749506|ref|ZP_19282625.1| polysulfidee reductase, NrfD [Capnocytophaga sp. oral taxon 332
str. F0381]
gi|429168043|gb|EKY09904.1| polysulfidee reductase, NrfD [Capnocytophaga sp. oral taxon 332
str. F0381]
Length = 757
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 63 SLAQTVDIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVT 118
SL ++ + +G +L+ C CH DG G +I+ G + + + + T IYHV
Sbjct: 666 SLQRSQHLTQGKALYDIYCALCHGEKGDGKGILIERGKIFGVPNYKNIDI-TAGSIYHVI 724
Query: 119 YFGKGRMPGFGEKCTPR 135
Y+G+ M F + T +
Sbjct: 725 YYGRNAMNDFATQLTEK 741
>gi|399116396|emb|CCG19201.1| putative cytochrome C oxidase subunit [Taylorella asinigenitalis
14/45]
Length = 310
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 17/90 (18%)
Query: 70 IQKGVSLFRQACIGCH--DGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGK-GRMP 126
I KG + Q CI CH DG GN + GA D+ N + D I H G+ G MP
Sbjct: 225 IAKGKEKYDQICIACHMADGKGNRLL-GAPNLTDDVWFNS-SSRDVIVHTILNGRSGEMP 282
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFV 156
GA L ++ IK+LA +V
Sbjct: 283 A------------HGALLTEDQIKILASYV 300
>gi|431797457|ref|YP_007224361.1| cytochrome c, mono- and diheme variants family [Echinicola
vietnamensis DSM 17526]
gi|430788222|gb|AGA78351.1| cytochrome c, mono- and diheme variants family [Echinicola
vietnamensis DSM 17526]
Length = 209
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 44 DTYNVLCLPVSLGFFHAAVSLAQTVDIQ-----KGVSLFRQACIGCHDGGGN-------V 91
+ Y++L + + A+ S+ V++ G LF Q C+ CH GG V
Sbjct: 92 NQYDMLPYRLDVADLTASDSVKNPVELNDQVLAAGEQLFMQYCLPCHGAGGEGDGKVGEV 151
Query: 92 IQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
I G LK + TE I+HV GKGRM G + +P
Sbjct: 152 I--GGVANLKGGAYINL-TEGHIFHVITHGKGRMGAHGSQISPE 192
>gi|428213223|ref|YP_007086367.1| photosystem II cytochrome PsbV2 [Oscillatoria acuminata PCC 6304]
gi|428001604|gb|AFY82447.1| photosystem II cytochrome PsbV2 [Oscillatoria acuminata PCC 6304]
Length = 166
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 69 DIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQ 104
+ +G LF+Q C+ CH GG + P +L LKDL
Sbjct: 63 SLHEGKELFKQHCLNCHVGGATLPYPVVSLSLKDLS 98
>gi|120404529|ref|YP_954358.1| class I cytochrome c [Mycobacterium vanbaalenii PYR-1]
gi|119957347|gb|ABM14352.1| menaquinol-cytochrome c reductase cytochrome c1 subunit precursor
[Mycobacterium vanbaalenii PYR-1]
Length = 273
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 69 DIQKGVSLFRQACIGCHD--GGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMP 126
D+ +G LFR C CH+ G G + G + DL GV T +IY G MP
Sbjct: 155 DVARGGDLFRLNCASCHNFTGKGGALSSGK--YAPDL---GVATPAQIYTAMVTGPQNMP 209
Query: 127 GFGEK 131
F E+
Sbjct: 210 KFSER 214
>gi|86609972|ref|YP_478734.1| cytochrome c-550 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123765433|sp|Q2JIS7.1|PSBV2_SYNJB RecName: Full=Cytochrome c-550-like protein; Flags: Precursor
gi|86558514|gb|ABD03471.1| cytochrome, putative [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 165
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 52 PVSLGFFHAAVSLAQTVD-IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQ 104
PV L A +L T + + G + F+ AC+ CH GG + P +L LKDL+
Sbjct: 53 PVELPLDAAGHTLTFTPEQLTDGKNRFQSACLNCHVGGATLPAPNISLSLKDLR 106
>gi|296274545|ref|YP_003657176.1| cytochrome-c peroxidase [Arcobacter nitrofigilis DSM 7299]
gi|296098719|gb|ADG94669.1| Cytochrome-c peroxidase [Arcobacter nitrofigilis DSM 7299]
Length = 344
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 16/112 (14%)
Query: 71 QKGVSLF-RQACIGCHD--GGGNVIQPGATLF------LKDLQ--RNGVDTEDEIYHV-- 117
+KG++LF + CIGCH+ G G +QP AT L D + +N + + ++
Sbjct: 216 KKGLNLFIDKGCIGCHNDIGLGGTMQPFATAAKYKFANLGDFKGDKNRMVKTPTLRNIEE 275
Query: 118 --TYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKI 167
YF G + E G G ++ D D K + F+KS + PKI
Sbjct: 276 TAPYFHNGGVWSLKEAVKVMGSTQLGLKISDNDAKEIVTFLKSLTGEK-PKI 326
>gi|320451419|ref|YP_004203515.1| cytochrome c [Thermus scotoductus SA-01]
gi|320151588|gb|ADW22966.1| cytochrome c [Thermus scotoductus SA-01]
Length = 241
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 28/112 (25%)
Query: 65 AQTVD---IQKGVSLFRQACIGCHDGGGNVIQPGATLF-----LKDLQRNGVDTEDEIYH 116
A VD ++KG S++ C+ CH G + P LKD Q + +
Sbjct: 150 AANVDQALMEKGKSIYEANCVACHQANGQGMPPAFPALAGNPNLKDTQL--------VLN 201
Query: 117 VTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWPKIE 168
G+G MP GA DED+K +A ++++ + +E
Sbjct: 202 TIKNGRGAMP------------AVGAAFSDEDLKAVATYIRNSFGNSFGPVE 241
>gi|24636293|sp|P83391.1|CYC6_CLAGO RecName: Full=Cytochrome c6; AltName: Full=Cytochrome c-553;
AltName: Full=Cytochrome c553; AltName: Full=Soluble
cytochrome f
gi|27573792|pdb|1LS9|A Chain A, Structure Of The Cytochrome C6 From The Green Alga
Cladophora Glomerata
Length = 91
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 14/93 (15%)
Query: 70 IQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQR--NGVDTEDEIYHVTYFGKGRMPG 127
+ G +F C CH GG N + TL +++ G T + I + GKG MP
Sbjct: 6 LADGKKVFAGNCAACHLGGNNSVLADKTLKKDAIEKYLEGGLTLEAIKYQVNNGKGAMPA 65
Query: 128 FGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQA 160
+ + RL ++DI+ ++ +V QA
Sbjct: 66 WAD------------RLDEDDIEAVSNYVYDQA 86
>gi|346992192|ref|ZP_08860264.1| putative cytochrome c family protein [Ruegeria sp. TW15]
Length = 156
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 37 ELELQKYDTYNVL-CLPVSLGFFHAAVSLAQTVDIQKGVSLFRQACIGCH 85
ELE+ +L C + L F A+ +LAQ +D+Q G L+R C CH
Sbjct: 11 ELEMLNLSEEQMLVCRTLLLSIFTASAALAQDIDLQNGHDLYRTYCWQCH 60
>gi|228472676|ref|ZP_04057436.1| cytochrome c family protein [Capnocytophaga gingivalis ATCC 33624]
gi|228276089|gb|EEK14845.1| cytochrome c family protein [Capnocytophaga gingivalis ATCC 33624]
Length = 193
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 61 AVSLAQTVDIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRNGVDTEDEIYH 116
A SLA +++G +L+ C+ CH DG G ++Q L + + + + T+ IY+
Sbjct: 97 ADSLALKDHLKEGAALYNIYCMVCHGAEGDGQGILVQRDKYLGVPNYKDREI-TQGSIYY 155
Query: 117 VTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLL 152
V Y G+ M + + T + + ++ KLL
Sbjct: 156 VIYHGRNAMGSYASQITEKERWQVALYVEQLRNKLL 191
>gi|75426332|sp|O34215.1|GADH2_PECCY RecName: Full=Gluconate 2-dehydrogenase cytochrome c subunit;
Short=GA 2-DH cytochrome c subunit; Short=GADH
cytochrome c subunit; Flags: Precursor
gi|2584861|gb|AAC45884.1| cytochrome c precursor [Pantoea cypripedii]
Length = 441
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 11/108 (10%)
Query: 61 AVSLAQTVDIQKGVSLFRQACIGCHDGGGN---VIQPGATLFLKDLQRNGVDTED--EIY 115
A +L + D Q G S++ +C CH G+ + PGA Q G D +
Sbjct: 305 AKALWKGDDSQTGASVYVDSCAACHKTDGSRLSALLPGAAW-----QPGGAGEPDPTSLI 359
Query: 116 HVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQG 163
H+ G G +PG T FG RL D+ + + F++ G
Sbjct: 360 HIVLTG-GTLPGVQGAPTAITMPAFGWRLNDQQVADVVNFIRGSWGNG 406
>gi|86140755|ref|ZP_01059314.1| hypothetical protein MED217_16425 [Leeuwenhoekiella blandensis
MED217]
gi|85832697|gb|EAQ51146.1| hypothetical protein MED217_16425 [Leeuwenhoekiella blandensis
MED217]
Length = 219
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 56 GFFHAAVSLAQTV-----DIQKGVSLFRQACIGCH----DGGGNVIQPGATLFLKDLQRN 106
G+ A SL V ++ +G +L+ C CH DG G + + L +
Sbjct: 79 GYEAAKASLTNPVPYTEDNLNEGKALYTIYCAICHGDKGDGKGTLAKREKILGVPAYNDQ 138
Query: 107 G-VDTEDEIYHVTYFGKGRMPGFGEKCTPR 135
G TE +YHVTY+G M + + T R
Sbjct: 139 GRAITEGSVYHVTYYGLNTMGSYASQTTER 168
>gi|389682631|ref|ZP_10173971.1| cytochrome c family protein [Pseudomonas chlororaphis O6]
gi|388553714|gb|EIM16967.1| cytochrome c family protein [Pseudomonas chlororaphis O6]
Length = 421
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 35/99 (35%), Gaps = 4/99 (4%)
Query: 67 TVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMP 126
V+ G LF+ AC GCH + Q L+ + G P
Sbjct: 311 VVEQAPGAQLFQSACAGCHGPAAPMRQIDGRPALERTSALHASSARNFLKTVLEGVPATP 370
Query: 127 GFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQADQGWP 165
G P F A L ++ + LA F++ QA G P
Sbjct: 371 GLPGPVMP----PFAASLDNQQLAALASFLREQASPGQP 405
>gi|311741500|ref|ZP_07715324.1| ubiquinol-cytochrome c reductase cytochrome C subunit
[Corynebacterium pseudogenitalium ATCC 33035]
gi|311303670|gb|EFQ79749.1| ubiquinol-cytochrome c reductase cytochrome C subunit
[Corynebacterium pseudogenitalium ATCC 33035]
Length = 295
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 66 QTVDIQKGVSLFRQACIGCHD--GGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKG 123
Q D+ KG LFR C CH+ G G + G F +L +E EIY G
Sbjct: 174 QAEDVAKGSELFRMNCASCHNFTGQGGALSSGK--FAPELAPA---SEQEIYQAMLTGPQ 228
Query: 124 RMPGFGEK 131
MP F ++
Sbjct: 229 NMPKFSDR 236
>gi|144897945|emb|CAM74809.1| cytochrome c551 peroxidase [Magnetospirillum gryphiswaldense MSR-1]
Length = 327
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 46/124 (37%), Gaps = 28/124 (22%)
Query: 63 SLAQTVDIQKGVSLFRQ-ACIGCHDG---GGNVIQP-----------GATLFLKDLQRNG 107
+ A D +KG +LF+ C CH G GGN+ Q G + DL R
Sbjct: 194 ATALGADEKKGYALFKSYGCASCHQGANVGGNLFQKLGFFGNWFKDRGGPVTAADLGRFN 253
Query: 108 VDTEDEIYHV-------------TYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQ 154
V D HV YF G + E G+ G + D DI L+ +
Sbjct: 254 VTGRDSDRHVFKVPSLRLAVLTPPYFHDGSVSSLDEAIRIMGRYQLGRDIPDADIALIVK 313
Query: 155 FVKS 158
F+ +
Sbjct: 314 FLGT 317
>gi|354615625|ref|ZP_09033374.1| cytochrome c class I [Saccharomonospora paurometabolica YIM 90007]
gi|353220024|gb|EHB84513.1| cytochrome c class I [Saccharomonospora paurometabolica YIM 90007]
Length = 275
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 14/90 (15%)
Query: 72 KGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMPGFGEK 131
+G LFR C CH+ G Q GA K G E EIY G MP F ++
Sbjct: 159 RGAELFRLNCASCHNFTG---QGGALSAGKYAPELGPANESEIYTAMQSGPQNMPKFSDR 215
Query: 132 CTPRGQCTFGARLQDEDIKLLAQFVKSQAD 161
+L E+ K + +VKS +D
Sbjct: 216 -----------QLSPEEKKDIVAYVKSVSD 234
>gi|443672715|ref|ZP_21137796.1| Ubiquinol-cytochrome c reductase PetC [Rhodococcus sp. AW25M09]
gi|443414742|emb|CCQ16134.1| Ubiquinol-cytochrome c reductase PetC [Rhodococcus sp. AW25M09]
Length = 249
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 69 DIQKGVSLFRQACIGCHD--GGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRMP 126
D+ +G LFR C CH+ G G + G F DL G E EIY G MP
Sbjct: 131 DVARGSELFRLNCASCHNFTGQGGALSSGK--FAPDL---GPANEQEIYTAMVTGPQNMP 185
Query: 127 GFGEK 131
F ++
Sbjct: 186 KFSDR 190
>gi|255325371|ref|ZP_05366477.1| menaquinol-cytochrome c reductase cytochrome c subunit
[Corynebacterium tuberculostearicum SK141]
gi|255297936|gb|EET77247.1| menaquinol-cytochrome c reductase cytochrome c subunit
[Corynebacterium tuberculostearicum SK141]
Length = 294
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 66 QTVDIQKGVSLFRQACIGCHD--GGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKG 123
Q D+ KG LFR C CH+ G G + G F +L +E EIY G
Sbjct: 173 QAEDVAKGSELFRMNCASCHNFTGQGGALSSGK--FAPELAPA---SEQEIYQAMLTGPQ 227
Query: 124 RMPGFGEK 131
MP F ++
Sbjct: 228 NMPKFSDR 235
>gi|395236745|ref|ZP_10414903.1| putative menaquinol-cytochrome c reductase cytochrome c subunit
[Turicella otitidis ATCC 51513]
gi|423350333|ref|ZP_17327986.1| menaquinol-cytochrome c reductase cytochrome C subunit [Turicella
otitidis ATCC 51513]
gi|394488092|emb|CCI82991.1| putative menaquinol-cytochrome c reductase cytochrome c subunit
[Turicella otitidis ATCC 51513]
gi|404387683|gb|EJZ82789.1| menaquinol-cytochrome c reductase cytochrome C subunit [Turicella
otitidis ATCC 51513]
Length = 295
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 18/93 (19%)
Query: 68 VDIQKGVSLFRQACIGCHD--GGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRM 125
D+ +G LFRQ C CH+ G G + G + D E EIY G M
Sbjct: 176 ADVARGSELFRQNCASCHNFTGRGGALSSGKYAPVLDPA-----NEQEIYQAMLTGPQNM 230
Query: 126 PGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKS 158
P F ++ +L ++ K + FVKS
Sbjct: 231 PKFSDR-----------QLSPDEKKDIIAFVKS 252
>gi|408380710|ref|ZP_11178290.1| cytochrome-c peroxidase [Agrobacterium albertimagni AOL15]
gi|407745405|gb|EKF56941.1| cytochrome-c peroxidase [Agrobacterium albertimagni AOL15]
Length = 350
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 25/119 (21%)
Query: 65 AQTVDIQKGVSLF-RQACIGCHDG---GGN-------VIQPGATLFLK-DLQRNGV-DTE 111
A T++ Q+G++LF + C CH G GG + +PGA + + D R V +T
Sbjct: 203 AMTIEQQQGLALFIDKGCAACHGGINVGGEGYYPFGLIEKPGADVLPEGDKGRFAVTNTA 262
Query: 112 DEIY------------HVTYFGKGRMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKS 158
D+ Y YF G++ G E G G LQ+ D+ + F++S
Sbjct: 263 DDSYVFRAAPLRNVALTAPYFHSGKVWGLNEAVAIMGTSQLGEELQEGDVGKIVAFLES 321
>gi|290760286|gb|ADD54636.1| photosystem II V protein [Galdieria sulphuraria]
Length = 167
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 67 TVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQ 104
T ++KG LF C CH GGG P L +K LQ
Sbjct: 53 TEQVKKGKRLFNSNCAQCHSGGGTKTNPNIGLDIKSLQ 90
>gi|296117510|ref|ZP_06836094.1| cytochrome c family protein [Corynebacterium ammoniagenes DSM
20306]
gi|295969241|gb|EFG82482.1| cytochrome c family protein [Corynebacterium ammoniagenes DSM
20306]
Length = 298
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 22/105 (20%)
Query: 66 QTVDIQKGVSLFRQACIGCHD--GGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKG 123
Q+ D+ +G LFR C CH+ G G + G K G E EIY G
Sbjct: 177 QSEDVARGGELFRMNCASCHNFTGKGGSLSSG-----KYAPPLGPANEQEIYQAMLTGPQ 231
Query: 124 RMPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKSQAD----QGW 164
MP F ++ +L ++ K L ++KS ++ GW
Sbjct: 232 NMPKFSDR-----------QLSADEKKDLIAYIKSASETPSPAGW 265
>gi|411118783|ref|ZP_11391163.1| Zn-dependent hydrolase, glyoxylase [Oscillatoriales cyanobacterium
JSC-12]
gi|410710646|gb|EKQ68153.1| Zn-dependent hydrolase, glyoxylase [Oscillatoriales cyanobacterium
JSC-12]
Length = 243
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Query: 22 LSPL---KSFHWKQQL-SMELELQKY--DTYNVLCLPVSLGFFHAAVSLAQTVD 69
LSP+ K+FHW++QL S++ + ++ DT N++C +LGF ++L Q D
Sbjct: 176 LSPIRIPKTFHWQRQLNSVQKLIDEFSPDTLNIICPGANLGFLRGQLALEQGYD 229
>gi|306836520|ref|ZP_07469491.1| cytochrome c family protein [Corynebacterium accolens ATCC 49726]
gi|304567610|gb|EFM43204.1| cytochrome c family protein [Corynebacterium accolens ATCC 49726]
Length = 295
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 66 QTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRM 125
Q D+ KG LFR C CH+ G Q GA K E EIY G M
Sbjct: 174 QAEDVAKGSELFRMNCASCHNFTG---QGGALSSGKYAPELAPANEQEIYQAMLTGPQNM 230
Query: 126 PGFGEK 131
P F ++
Sbjct: 231 PKFSDR 236
>gi|227503251|ref|ZP_03933300.1| ubiquinol-cytochrome C reductase cytochrome C subunit
[Corynebacterium accolens ATCC 49725]
gi|227075754|gb|EEI13717.1| ubiquinol-cytochrome C reductase cytochrome C subunit
[Corynebacterium accolens ATCC 49725]
Length = 295
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 66 QTVDIQKGVSLFRQACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGKGRM 125
Q D+ KG LFR C CH+ G Q GA K E EIY G M
Sbjct: 174 QAEDVAKGSELFRMNCASCHNFTG---QGGALSSGKYAPELAPANEQEIYQAMLTGPQNM 230
Query: 126 PGFGEK 131
P F ++
Sbjct: 231 PKFSDR 236
>gi|385221646|ref|YP_005770779.1| cytochrome c oxidase, cbb3-type subunit III [Helicobacter pylori
SouthAfrica7]
gi|317010425|gb|ADU84172.1| cytochrome c oxidase, cbb3-type, subunit III [Helicobacter pylori
SouthAfrica7]
Length = 292
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 19/94 (20%)
Query: 70 IQKGVSLFRQ-ACIGCHDGGGNVIQPGATLFLKDLQRNGVDTEDEIYHVTYFGK----GR 124
I KG LF C+GCH G +Q +F DL G TE+ + ++ GK G
Sbjct: 207 IDKGKELFESMGCVGCHGSDGKGLQDN-QVFAADLTTYG--TENFLRNILTHGKKGNIGH 263
Query: 125 MPGFGEKCTPRGQCTFGARLQDEDIKLLAQFVKS 158
MP F K D +K LA+F++S
Sbjct: 264 MPSFKYK-----------NFSDLQVKALAEFIQS 286
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,712,123,032
Number of Sequences: 23463169
Number of extensions: 111193935
Number of successful extensions: 200423
Number of sequences better than 100.0: 413
Number of HSP's better than 100.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 147
Number of HSP's that attempted gapping in prelim test: 199908
Number of HSP's gapped (non-prelim): 426
length of query: 172
length of database: 8,064,228,071
effective HSP length: 132
effective length of query: 40
effective length of database: 9,262,057,059
effective search space: 370482282360
effective search space used: 370482282360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)