BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030719
(172 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1
Length = 82
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 70 APEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGF-QSEGPLVLPCRVDVFYR 128
AP+G +VYVG + +RFVI Y+N P F+ LL +AE E+G+ G L +PC +VF R
Sbjct: 17 APKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQR 76
Query: 129 VLLAVD 134
+ ++
Sbjct: 77 ITCCLN 82
>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var.
radiata GN=ARG7 PE=2 SV=1
Length = 92
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 59 EKRSKKLKRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGF-QSEGPL 117
E SK L AP+G +VYVG +RFVI ++N PLF+ LL +AE E+G+ G L
Sbjct: 17 EASSKVLD---APKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGL 73
Query: 118 VLPCRVDVFYRV 129
+PC D+F +
Sbjct: 74 TIPCSEDLFQHI 85
>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
Length = 82
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 63 KKLKRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGF-QSEGPLVLPC 121
K K AP+G +VYVG + +RFVI Y+N P F+ LL +AE E+G+ G L +PC
Sbjct: 10 KASKAADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPC 69
Query: 122 RVDVF 126
DVF
Sbjct: 70 SEDVF 74
>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
Length = 92
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 70 APEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGF-QSEGPLVLPCRVDVFYR 128
P+G VYVG + +RF+I Y+N P F+ LL +AE E+G+ G L +PC+ D F
Sbjct: 25 VPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLT 84
Query: 129 VLLAVDD 135
V ++D
Sbjct: 85 VTSHLND 91
>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1
Length = 90
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 72 EGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQS-EGPLVLPCRVDVFYRV 129
+G +VYVG + +RFVI Y+N P F+ LL +AE E+G+ G L +PC DVF +
Sbjct: 27 KGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHI 85
>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1
Length = 93
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 66 KRRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGF-QSEGPLVLPCRVD 124
KR P+G +VYVG + +RF I Y+N P F+ LL +AE E+G+ G L +PC+ +
Sbjct: 22 KRVDVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEE 81
Query: 125 VFYRVLLAVDD 135
F V +++
Sbjct: 82 EFLNVTAHLNE 92
>sp|P50734|MECA2_BACSU Adapter protein MecA 2 OS=Bacillus subtilis (strain 168) GN=mecB
PE=1 SV=1
Length = 194
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 95 HPLFKLLLEEAESEYGFQSEGPLVLPC 121
H LFK ++ EA +E GF++ GP+ +
Sbjct: 38 HQLFKDMMNEANTELGFEANGPIAVEV 64
>sp|Q02979|GDE1_YEAST Glycerophosphodiester phosphodiesterase GDE1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GDE1 PE=1
SV=1
Length = 1223
Score = 31.2 bits (69), Expect = 3.7, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 88 IKTEYVNHPLFKLLLEEAESEYGFQS----EGPLVLPCRVDVF 126
+ TE+ N+PL +LL + +Q E PL L CR++ F
Sbjct: 510 LATEWNNYPLLHVLLSSKRFDINYQDNELHETPLYLACRLNFF 552
>sp|Q88JJ0|PSTB1_PSEPK Phosphate import ATP-binding protein PstB 1 OS=Pseudomonas putida
(strain KT2440) GN=pstB1 PE=3 SV=1
Length = 279
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 99 KLLLEEAESEYGFQSEGPLVLPCRVD-VFYRVLLAVDDHD--HDHNKEDNFIRRPGCG 153
L + A+ SE P+V+ C++D +FY +AV D N+ FI GCG
Sbjct: 7 NLNVSTAQRAAPMVSEAPIVMDCKLDKIFYGNFMAVRDSHVPIRKNEITGFIGPSGCG 64
>sp|C4L8X4|IF2_TOLAT Translation initiation factor IF-2 OS=Tolumonas auensis (strain DSM
9187 / TA4) GN=infB PE=3 SV=1
Length = 910
Score = 29.6 bits (65), Expect = 9.3, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 19 ERCKSIGRSSKRSAPALRVKSKSWPRIDTRLEEEEEDEEEEKRSKKLKRRVAPE 72
E K ++KR A ALR K + + T LE + + E E +R + RR+A E
Sbjct: 180 EADKRADENAKREAEALRKKQEEEAQRKTELEAQRKTELEAQRIAEEARRLAVE 233
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,748,588
Number of Sequences: 539616
Number of extensions: 2971084
Number of successful extensions: 28546
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 27836
Number of HSP's gapped (non-prelim): 558
length of query: 172
length of database: 191,569,459
effective HSP length: 109
effective length of query: 63
effective length of database: 132,751,315
effective search space: 8363332845
effective search space used: 8363332845
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)