Query 030719
Match_columns 172
No_of_seqs 187 out of 644
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 05:06:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030719.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030719hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2al3_A TUG long isoform; TUG U 70.1 3.9 0.00013 29.6 3.4 42 70-113 6-47 (90)
2 3drz_A BTB/POZ domain-containi 57.4 19 0.00065 25.6 5.1 63 72-137 5-72 (107)
3 1s1g_A Potassium voltage-gated 44.9 14 0.00047 27.5 2.7 63 71-137 11-75 (124)
4 1und_A Advillin, P92; actin bi 43.4 4.9 0.00017 24.5 -0.0 19 91-109 1-19 (37)
5 1vd2_A Protein kinase C, IOTA 40.7 33 0.0011 24.3 4.0 53 78-135 12-76 (89)
6 2vkp_A BTB/POZ domain-containi 40.1 43 0.0015 22.5 4.5 59 75-137 11-74 (109)
7 2nz0_B Potassium voltage-gated 35.9 18 0.00062 27.4 2.1 63 71-137 33-97 (140)
8 3drx_A BTB/POZ domain-containi 30.9 52 0.0018 26.6 4.2 64 71-137 10-78 (202)
9 2vpk_A Myoneurin; transcriptio 29.7 61 0.0021 22.1 3.9 54 75-137 25-83 (116)
10 3n5b_B ASR0485 protein; PII, P 25.6 11 0.00036 28.4 -0.8 28 67-102 12-39 (112)
11 3ga1_A Nucleus accumbens-assoc 25.6 1.1E+02 0.0036 21.4 4.7 54 75-137 36-93 (129)
12 1r29_A B-cell lymphoma 6 prote 23.5 77 0.0026 22.0 3.5 57 75-137 32-92 (127)
13 1yu8_X Villin; alpha helix, 3- 23.5 18 0.0006 24.7 0.1 19 91-109 31-49 (67)
14 1zav_U 50S ribosomal protein L 21.8 51 0.0017 19.0 1.8 14 97-110 17-30 (30)
15 1qzp_A Dematin; villin headpie 20.9 15 0.00052 25.0 -0.7 19 91-109 32-50 (68)
16 1ujs_A Actin-binding LIM prote 20.5 20 0.00069 25.7 -0.1 20 91-110 46-65 (88)
No 1
>2al3_A TUG long isoform; TUG UBL1 insulin, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: d.15.1.2
Probab=70.14 E-value=3.9 Score=29.56 Aligned_cols=42 Identities=17% Similarity=0.275 Sum_probs=30.0
Q ss_pred CCCceEEEEeCCCCeeEEEEecccCcHHHHHHHHHHHhhcCcCC
Q 030719 70 APEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQS 113 (172)
Q Consensus 70 ~pkG~~~VYVG~e~~RfvVp~~yL~hp~F~eLL~~aeeEfG~~~ 113 (172)
+..|--++++....+|+.|++.- .-.+.++|++|-+.|||+.
T Consensus 6 ~~~~m~v~Vl~~n~rr~~VKvtp--~t~L~~VL~eaC~K~gl~~ 47 (90)
T 2al3_A 6 GGGGSAVSVLAPNGRRHTVKVTP--STVLLQVLEDTCRRQDFNP 47 (90)
T ss_dssp ----CCEEEECTTSCEEEECCCT--TSBHHHHHHHHHHHTTCCG
T ss_pred cCCccEEEEEcCCCcEEEEEECC--CCCHHHHHHHHHHHhCCCh
Confidence 34455566666788999999843 3367789999999999974
No 2
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=57.35 E-value=19 Score=25.55 Aligned_cols=63 Identities=14% Similarity=0.211 Sum_probs=45.9
Q ss_pred CceEEEEeCCCCeeEEEEecccC-cH--HHHHHHHHHHhhcC--cCCCCCeEecCcHHHHHHHHHHHhcCC
Q 030719 72 EGCFSVYVGPQKQRFVIKTEYVN-HP--LFKLLLEEAESEYG--FQSEGPLVLPCRVDVFYRVLLAVDDHD 137 (172)
Q Consensus 72 kG~~~VYVG~e~~RfvVp~~yL~-hp--~F~eLL~~aeeEfG--~~~~G~L~iPCd~~~Fe~vl~~l~~~~ 137 (172)
...+.+-|| +.+|.+..+-|. +| .|..|... ..++. .+.+|.+-|-.+...|++||.-++.+.
T Consensus 5 ~~~v~LNVG--G~~f~t~~~TL~~~p~s~L~~~~~~-~~~~~~~~d~~~~~fiDRdp~~F~~IL~~lr~g~ 72 (107)
T 3drz_A 5 SKWVRLNVG--GTYFLTTRQTLCRDPKSFLYRLCQA-DPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGK 72 (107)
T ss_dssp CCEEEEEET--TEEEEEEHHHHTSSTTSHHHHHHTT-CGGGGGGBCTTSCEEECSCHHHHHHHHHHHHHSC
T ss_pred CCEEEEEEC--CEEEEECHHHHhcCCCcchhHHHhc-CCCCCcCCCCCceEEecCChHHHHHHHHHhCCCe
Confidence 356778898 699999987664 33 55555432 11232 346799999999999999999999874
No 3
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=44.88 E-value=14 Score=27.46 Aligned_cols=63 Identities=21% Similarity=0.214 Sum_probs=44.9
Q ss_pred CCceEEEEeCCCCeeEEEEecccC-cHHHHHHHHHHHhhcCc-CCCCCeEecCcHHHHHHHHHHHhcCC
Q 030719 71 PEGCFSVYVGPQKQRFVIKTEYVN-HPLFKLLLEEAESEYGF-QSEGPLVLPCRVDVFYRVLLAVDDHD 137 (172)
Q Consensus 71 pkG~~~VYVG~e~~RfvVp~~yL~-hp~F~eLL~~aeeEfG~-~~~G~L~iPCd~~~Fe~vl~~l~~~~ 137 (172)
....+.+-|| +.||.+..+-|. .|. .+|..++...-| +.+|.+-|-.+...|++||.-++.+.
T Consensus 11 ~~~~V~LNVG--G~~F~t~~~TL~~~p~--S~L~~~~~~~~~~~~~g~~FiDRdp~~F~~ILnflR~G~ 75 (124)
T 1s1g_A 11 QDELIVLNVS--GRRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGK 75 (124)
T ss_dssp -CCEEEEEET--TEEEEEEHHHHTTSTT--SSTTSSGGGGTBCSSSCSEEECSCHHHHHHHHHHHHHSC
T ss_pred CCCEEEEEeC--CEEEEEeHHHHhcCCC--ceecccCCcccccCCCCcEEEcCChHHHHHHHHHHhcCC
Confidence 4567888898 699999986553 232 123334333334 36899999999999999999999974
No 4
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=43.35 E-value=4.9 Score=24.54 Aligned_cols=19 Identities=11% Similarity=0.333 Sum_probs=17.2
Q ss_pred cccCcHHHHHHHHHHHhhc
Q 030719 91 EYVNHPLFKLLLEEAESEY 109 (172)
Q Consensus 91 ~yL~hp~F~eLL~~aeeEf 109 (172)
.||+.-.|++++.|+.+||
T Consensus 1 ~yLsd~dF~~vFgmsr~eF 19 (37)
T 1und_A 1 XYLSEQDFVSVFGITRGQF 19 (37)
T ss_dssp -CCCHHHHHHHHSSCHHHH
T ss_pred CCCCHHHHHHHHCcCHHHH
Confidence 4899999999999999998
No 5
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=40.68 E-value=33 Score=24.35 Aligned_cols=53 Identities=13% Similarity=0.145 Sum_probs=34.5
Q ss_pred EeCCCCeeEEEEecccCcHHHHHHHHHHHhhcCcCCCC------------CeEecCcHHHHHHHHHHHhc
Q 030719 78 YVGPQKQRFVIKTEYVNHPLFKLLLEEAESEYGFQSEG------------PLVLPCRVDVFYRVLLAVDD 135 (172)
Q Consensus 78 YVG~e~~RfvVp~~yL~hp~F~eLL~~aeeEfG~~~~G------------~L~iPCd~~~Fe~vl~~l~~ 135 (172)
|-.++-.||.||. ..-|++|.++..+-|++..+. +++|.=+.++- ..+...+.
T Consensus 12 ~~~gdi~~~~v~~----~i~~~~L~~kv~~~~~~~~~~~f~lky~DEeGD~itisSd~EL~-eAl~l~~~ 76 (89)
T 1vd2_A 12 YYRGDIMITHFEP----SISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELE-EAFRLYEL 76 (89)
T ss_dssp ESSSCEEEEEECT----TCCHHHHHHHHHHHTTCCSSCCEEEEECCSSSCCEECCSHHHHH-HHHHHHHH
T ss_pred EeCCeEEEEECCC----CCCHHHHHHHHHHHhCCCCCCeEEEEEECCCCCcccccCHHHHH-HHHHHHHc
Confidence 4344677888876 468999999999999975433 45555555443 44444433
No 6
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=40.13 E-value=43 Score=22.50 Aligned_cols=59 Identities=14% Similarity=0.227 Sum_probs=40.2
Q ss_pred EEEEeCC--CCeeEEEEeccc--CcHHHHHHHHHHHhhcCcCCCCCeEec-CcHHHHHHHHHHHhcCC
Q 030719 75 FSVYVGP--QKQRFVIKTEYV--NHPLFKLLLEEAESEYGFQSEGPLVLP-CRVDVFYRVLLAVDDHD 137 (172)
Q Consensus 75 ~~VYVG~--e~~RfvVp~~yL--~hp~F~eLL~~aeeEfG~~~~G~L~iP-Cd~~~Fe~vl~~l~~~~ 137 (172)
+.+.||+ +.++|-+.=..| ..|.|+.++...-.|- . ..|.|| .+...|+.+|.-+=.+.
T Consensus 11 v~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~---~-~~i~l~~~~~~~f~~~l~~iYt~~ 74 (109)
T 2vkp_A 11 VHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEV---K-SEIHIPDVEPAAFLILLKYMYSDE 74 (109)
T ss_dssp EEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC---------C-CEEEETTSCHHHHHHHHHHHHHCC
T ss_pred EEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccC---C-CeEEeCCCCHHHHHHHHHHHcCCC
Confidence 3455653 247888887777 5899999997543332 2 678997 68999999998887764
No 7
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=35.90 E-value=18 Score=27.42 Aligned_cols=63 Identities=21% Similarity=0.211 Sum_probs=45.5
Q ss_pred CCceEEEEeCCCCeeEEEEeccc-CcHHHHHHHHHHHhhcCc-CCCCCeEecCcHHHHHHHHHHHhcCC
Q 030719 71 PEGCFSVYVGPQKQRFVIKTEYV-NHPLFKLLLEEAESEYGF-QSEGPLVLPCRVDVFYRVLLAVDDHD 137 (172)
Q Consensus 71 pkG~~~VYVG~e~~RfvVp~~yL-~hp~F~eLL~~aeeEfG~-~~~G~L~iPCd~~~Fe~vl~~l~~~~ 137 (172)
....+.+-|| +.||.+..+=| .+|. .+|..++...-| +.+|.+-|-.|...|++||.-++.+.
T Consensus 33 ~~~~V~LNVG--G~~F~T~~~TL~~~P~--S~L~~~~~~~~~~~~~g~yFiDRdp~~F~~ILnflR~G~ 97 (140)
T 2nz0_B 33 QDELIVLNVS--GRRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGK 97 (140)
T ss_dssp CCCEEEEEET--TEEEEEEHHHHHTCTT--STTTSGGGGGSEETTTTEEEECSCHHHHHHHHHHHHHSS
T ss_pred CCCEEEEEEC--CEEEEeeHHHHhcCCC--eeecccCCcccccCCCCeEEEeCCcHHHHHHHHHHhcCC
Confidence 4577888898 69999988654 2332 133334433334 46899999999999999999999874
No 8
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=30.93 E-value=52 Score=26.63 Aligned_cols=64 Identities=14% Similarity=0.199 Sum_probs=45.8
Q ss_pred CCceEEEEeCCCCeeEEEEecccC-cH--HHHHHHHHHHhhcC--cCCCCCeEecCcHHHHHHHHHHHhcCC
Q 030719 71 PEGCFSVYVGPQKQRFVIKTEYVN-HP--LFKLLLEEAESEYG--FQSEGPLVLPCRVDVFYRVLLAVDDHD 137 (172)
Q Consensus 71 pkG~~~VYVG~e~~RfvVp~~yL~-hp--~F~eLL~~aeeEfG--~~~~G~L~iPCd~~~Fe~vl~~l~~~~ 137 (172)
..-.+.+-|| +.||.+...-|. +| .|..|+.. ..++. .+.+|.+-|..|...|++||..++.+.
T Consensus 10 ~~~~V~LNVG--G~~F~Tt~sTL~r~PdS~L~~lfs~-~~~~~~~~De~geyFIDRDP~~F~~ILnyLRtG~ 78 (202)
T 3drx_A 10 VSKWVRLNVG--GTYFLTTRQTLCRDPKSFLYRLCQA-DPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGK 78 (202)
T ss_dssp CCCEEEEEET--TEEEEEETTGGGSCTTSSTHHHHSC-CCC----BCTTCCEEECSCSTTHHHHHHHHHHSC
T ss_pred CCCEEEEEEC--CEEEEEeHHHHhCCCcchHHHHhcC-ccccCcccCCCccEEecCChHHHHHHHHHhcCCc
Confidence 4567788898 699999987664 34 45555321 11232 346899999999999999999999764
No 9
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=29.70 E-value=61 Score=22.14 Aligned_cols=54 Identities=17% Similarity=0.287 Sum_probs=39.8
Q ss_pred EEEEeCCCCeeEEEEeccc--CcHHHHHHHHHHHhhcCcCCCCCeEec---CcHHHHHHHHHHHhcCC
Q 030719 75 FSVYVGPQKQRFVIKTEYV--NHPLFKLLLEEAESEYGFQSEGPLVLP---CRVDVFYRVLLAVDDHD 137 (172)
Q Consensus 75 ~~VYVG~e~~RfvVp~~yL--~hp~F~eLL~~aeeEfG~~~~G~L~iP---Cd~~~Fe~vl~~l~~~~ 137 (172)
+.+.|| +++|-+.-..| ..|.|+.++... .++.|.|+ .+...|+.+|.-+=.+.
T Consensus 25 v~l~v~--~~~~~aHk~vLaa~S~yF~~~f~~~-------~~~~i~l~~~~~~~~~f~~ll~~~Yt~~ 83 (116)
T 2vpk_A 25 CTIVIG--EFQFKAHRNVLASFSEYFGAIYRST-------SENNVFLDQSQVKADGFQKLLEFIYTGT 83 (116)
T ss_dssp EEEEET--TEEEEECHHHHHHHCHHHHHHHTTC-------CCSCEECCTTTCCHHHHHHHHHHHHHSC
T ss_pred EEEEEC--CEEEeccHHHHhhcCHHHHHHHcCC-------CCCeEEeecCCCCHHHHHHHHHHHcCCC
Confidence 345565 46777776666 578999988643 35678888 78999999998887764
No 10
>3n5b_B ASR0485 protein; PII, PIPX, transcription regulator, signal transducer; HET: ADP; 1.90A {Nostoc}
Probab=25.63 E-value=11 Score=28.44 Aligned_cols=28 Identities=29% Similarity=0.555 Sum_probs=10.4
Q ss_pred CCCCCCceEEEEeCCCCeeEEEEecccCcHHHHHHH
Q 030719 67 RRVAPEGCFSVYVGPQKQRFVIKTEYVNHPLFKLLL 102 (172)
Q Consensus 67 ~~~~pkG~~~VYVG~e~~RfvVp~~yL~hp~F~eLL 102 (172)
+..||+|-..-=+..| .|||||.|..|.
T Consensus 12 ~~~~~~~~~~~~ms~E--------~YLNHPTFGLLy 39 (112)
T 3n5b_B 12 SGLVPRGSHMNPENSE--------TYINHPTWGLLY 39 (112)
T ss_dssp --------------CC--------CEEEETTTEEEE
T ss_pred CCcccCCccCCCcchh--------hhccCCccchhe
Confidence 3567877654433333 499999997664
No 11
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=25.60 E-value=1.1e+02 Score=21.42 Aligned_cols=54 Identities=19% Similarity=0.257 Sum_probs=40.1
Q ss_pred EEEEeCCCCeeEEEEecccC--cHHHHHHHHHHHhhcCcCCCCCeEec--CcHHHHHHHHHHHhcCC
Q 030719 75 FSVYVGPQKQRFVIKTEYVN--HPLFKLLLEEAESEYGFQSEGPLVLP--CRVDVFYRVLLAVDDHD 137 (172)
Q Consensus 75 ~~VYVG~e~~RfvVp~~yL~--hp~F~eLL~~aeeEfG~~~~G~L~iP--Cd~~~Fe~vl~~l~~~~ 137 (172)
+.+.|| +++|-+.=..|. .|.|+.++... ....|.|| .+.+.|+.+|.-+=.+.
T Consensus 36 v~l~v~--~~~~~~Hk~vLaa~S~~F~~~f~~~-------~~~~i~l~~~~~~~~f~~ll~~iYtg~ 93 (129)
T 3ga1_A 36 VSVVVK--GHAFKAHRAVLAASSSYFRDLFNNS-------RSAVVELPAAVQPQSFQQILSFCYTGR 93 (129)
T ss_dssp EEEEET--TEEEEECHHHHHHHBHHHHHHHHHC-------CCSEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred eEEEEC--CEEEEehHHHHHHcCHHHHHHHcCC-------CCCEEEECCCCCHHHHHHHHHHHhCCc
Confidence 455565 467777655554 68999988765 45679996 89999999998876653
No 12
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=23.48 E-value=77 Score=21.97 Aligned_cols=57 Identities=14% Similarity=0.184 Sum_probs=41.8
Q ss_pred EEEEeCCCCeeEEEEeccc--CcHHHHHHHHHHHhhcCcCCCCCeEe-c-CcHHHHHHHHHHHhcCC
Q 030719 75 FSVYVGPQKQRFVIKTEYV--NHPLFKLLLEEAESEYGFQSEGPLVL-P-CRVDVFYRVLLAVDDHD 137 (172)
Q Consensus 75 ~~VYVG~e~~RfvVp~~yL--~hp~F~eLL~~aeeEfG~~~~G~L~i-P-Cd~~~Fe~vl~~l~~~~ 137 (172)
+.+.|| +++|-+.=..| ..|.|+.++...-.| ....|.| + .+...|+.+|.-|=.+.
T Consensus 32 v~l~v~--~~~~~aHk~iLaa~S~~F~~~f~~~~~e----~~~~i~l~~~~~~~~f~~ll~~~Ytg~ 92 (127)
T 1r29_A 32 VVIVVS--REQFRAHKTVLMACSGLFYSIFTDQLKR----NLSVINLDPEINPEGFNILLDFMYTSR 92 (127)
T ss_dssp EEEEET--TEEEEECHHHHHHHCHHHHHHHTSTTTT----TCSEEECCTTSCHHHHHHHHHHHHHSC
T ss_pred EEEEEC--CEEEehHHHHHHHhCHHHHHHhcCCccC----CCCEEEeCCCCCHHHHHHHHHHHcCCC
Confidence 445565 46777776666 679999999755444 4677999 4 78899999998887654
No 13
>1yu8_X Villin; alpha helix, 3-10 helix, structural protein; 1.45A {Gallus gallus} SCOP: a.14.1.1 PDB: 1qqv_A 1yu5_X 2rjx_A 2rjy_A 1yu7_X 2rjv_A 2rjw_A 3nkj_A 3myc_A 3mya_A 3mye_X 1unc_A
Probab=23.46 E-value=18 Score=24.74 Aligned_cols=19 Identities=16% Similarity=0.275 Sum_probs=18.3
Q ss_pred cccCcHHHHHHHHHHHhhc
Q 030719 91 EYVNHPLFKLLLEEAESEY 109 (172)
Q Consensus 91 ~yL~hp~F~eLL~~aeeEf 109 (172)
.||+.-.|++++.|+.+||
T Consensus 31 ~yLsdedF~~vFgms~~eF 49 (67)
T 1yu8_X 31 NHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHH
T ss_pred hcCCHHHHHHHHCcCHHHH
Confidence 7999999999999999998
No 14
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=21.78 E-value=51 Score=19.02 Aligned_cols=14 Identities=21% Similarity=0.477 Sum_probs=11.5
Q ss_pred HHHHHHHHHHhhcC
Q 030719 97 LFKLLLEEAESEYG 110 (172)
Q Consensus 97 ~F~eLL~~aeeEfG 110 (172)
...+|.+..||+||
T Consensus 17 El~eLvk~lEe~fG 30 (30)
T 1zav_U 17 ELAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhC
Confidence 35688899999998
No 15
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A
Probab=20.92 E-value=15 Score=25.00 Aligned_cols=19 Identities=11% Similarity=0.209 Sum_probs=18.1
Q ss_pred cccCcHHHHHHHHHHHhhc
Q 030719 91 EYVNHPLFKLLLEEAESEY 109 (172)
Q Consensus 91 ~yL~hp~F~eLL~~aeeEf 109 (172)
.||+.-.|++++.|+.+||
T Consensus 32 ~yLsdedF~~vFgmsr~eF 50 (68)
T 1qzp_A 32 RHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 7999999999999999998
No 16
>1ujs_A Actin-binding LIM protein homologue; VHP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 2l3x_A
Probab=20.52 E-value=20 Score=25.70 Aligned_cols=20 Identities=15% Similarity=0.202 Sum_probs=18.7
Q ss_pred cccCcHHHHHHHHHHHhhcC
Q 030719 91 EYVNHPLFKLLLEEAESEYG 110 (172)
Q Consensus 91 ~yL~hp~F~eLL~~aeeEfG 110 (172)
.||+.-.|++++.|+.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T 1ujs_A 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 79999999999999999983
Done!