Query 030721
Match_columns 172
No_of_seqs 117 out of 991
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 05:09:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030721.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030721hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mal_A Stromal cell-derived fa 100.0 6E-57 2.1E-61 354.0 16.2 171 1-171 27-197 (199)
2 1t9f_A Protein 1D10; structura 100.0 1E-53 3.6E-58 333.0 15.0 169 1-171 16-185 (187)
3 3uj4_A Inositol 1,4,5-trisphos 100.0 1E-31 3.4E-36 239.8 8.2 130 1-134 185-319 (604)
4 3mal_A Stromal cell-derived fa 100.0 7.5E-30 2.6E-34 200.0 9.9 111 48-162 12-131 (199)
5 1t9f_A Protein 1D10; structura 99.9 5.4E-28 1.9E-32 187.9 10.7 110 49-162 2-121 (187)
6 3uj4_A Inositol 1,4,5-trisphos 99.9 1.1E-25 3.7E-30 200.9 11.3 153 1-163 124-287 (604)
7 2xoa_A Ryanodine receptor 1; m 99.8 2.9E-20 9.9E-25 165.0 13.9 147 1-163 110-265 (559)
8 2xoa_A Ryanodine receptor 1; m 99.8 4.7E-21 1.6E-25 170.0 7.8 135 1-150 172-317 (559)
9 1n4k_A Inositol 1,4,5-trisphos 99.6 5.8E-17 2E-21 137.9 4.0 86 49-134 6-96 (381)
10 1n4k_A Inositol 1,4,5-trisphos 99.3 4.7E-12 1.6E-16 107.6 10.1 157 2-163 21-212 (381)
11 3im6_A Cardiac Ca2+ release ch 98.8 6.5E-08 2.2E-12 75.3 11.4 104 50-162 109-216 (217)
12 1xzz_A Inositol 1,4,5-trisphos 98.7 4.9E-08 1.7E-12 78.3 9.6 106 50-162 126-237 (246)
13 1xzz_A Inositol 1,4,5-trisphos 98.0 4.6E-05 1.6E-09 61.0 9.9 98 1-106 139-238 (246)
14 3im6_A Cardiac Ca2+ release ch 97.7 0.0003 1E-08 54.7 9.5 92 2-105 123-216 (217)
15 2yug_A Protein FRG1; spliceoso 90.0 2.3 8E-05 31.0 8.8 77 58-162 72-149 (155)
16 2fdb_M FGF8B, fibroblast growt 87.6 4.7 0.00016 29.8 9.1 61 59-134 28-91 (164)
17 3llp_A Fascin; beta-trefoil, a 86.6 2.8 9.7E-05 36.4 8.5 99 6-133 59-157 (493)
18 1bfg_A Basic fibroblast growth 86.5 4.4 0.00015 29.3 8.2 64 55-134 16-79 (146)
19 3llp_A Fascin; beta-trefoil, a 86.2 3.3 0.00011 36.0 8.6 107 24-165 32-139 (493)
20 1qql_A Fibroblast growth facto 84.0 3.8 0.00013 29.4 6.9 62 57-134 7-70 (140)
21 1q1u_A FGF-12, fibrobast growt 83.9 7.8 0.00027 27.9 8.5 61 57-134 10-70 (144)
22 1rg8_A Heparin-binding growth 83.8 10 0.00035 27.4 9.6 60 59-134 17-76 (146)
23 2p39_A Fibroblast growth facto 79.7 15 0.00053 26.7 10.2 62 56-134 12-75 (155)
24 3pg0_A Threefoil; symmetric de 76.5 18 0.0006 25.6 11.5 91 58-162 74-164 (165)
25 3pg0_A Threefoil; symmetric de 75.4 19 0.00065 25.5 9.0 92 57-162 26-117 (165)
26 1ijt_A FGF4, fibroblast growth 71.1 24 0.00082 24.7 9.6 50 68-134 15-64 (128)
27 1nun_A Fibroblast growth facto 71.0 26 0.00089 25.1 11.1 52 67-134 23-74 (145)
28 3q7x_A De novo designed beta-t 65.8 32 0.0011 24.1 9.3 82 26-135 28-109 (132)
29 2p23_A FGF-19, fibroblast grow 62.4 22 0.00075 26.9 6.4 61 57-134 17-84 (194)
30 1rg8_A Heparin-binding growth 58.1 13 0.00046 26.8 4.4 39 25-75 37-75 (146)
31 1ups_A Glcnac-alpha-1,4-GAL-re 58.0 75 0.0026 26.5 9.7 86 56-162 332-418 (420)
32 3q7x_A De novo designed beta-t 57.9 45 0.0015 23.3 9.0 59 59-133 7-65 (132)
33 1pwa_A FGF-19, fibroblast grow 57.7 25 0.00086 25.8 5.9 61 57-134 5-72 (162)
34 2yug_A Protein FRG1; spliceoso 57.4 40 0.0014 24.2 6.9 40 57-106 111-150 (155)
35 1nun_A Fibroblast growth facto 56.5 12 0.00041 26.9 3.9 38 25-74 35-72 (145)
36 1qql_A Fibroblast growth facto 55.4 14 0.00048 26.4 4.1 39 25-75 31-69 (140)
37 1f53_A Yeast killer toxin-like 54.6 15 0.00053 23.7 3.7 36 69-107 11-46 (84)
38 3vsf_A Ricin B lectin; GH43 CB 53.0 73 0.0025 27.2 9.0 93 56-162 359-451 (526)
39 3p6i_A De novo designed beta-t 52.5 61 0.0021 23.2 11.1 64 52-132 78-141 (142)
40 1ihk_A GLIA-activating factor; 52.4 68 0.0023 23.7 9.2 58 60-134 30-87 (174)
41 3hbw_A Fibroblast growth facto 48.4 66 0.0022 24.3 7.0 65 53-134 12-76 (193)
42 3f1r_A FGF-20, fibroblast grow 47.2 89 0.003 23.9 7.6 52 67-134 73-124 (211)
43 3zx7_A Lysenin; toxin, pore fo 46.2 40 0.0014 25.9 5.4 49 49-107 247-296 (309)
44 3nbc_A Ricin B-like lectin; la 45.8 63 0.0022 23.0 6.3 91 54-162 2-97 (148)
45 1bfg_A Basic fibroblast growth 41.3 16 0.00055 26.3 2.5 39 25-75 40-78 (146)
46 2fdb_M FGF8B, fibroblast growt 39.8 28 0.00096 25.5 3.6 22 53-74 68-89 (164)
47 3vsf_A Ricin B lectin; GH43 CB 38.7 93 0.0032 26.5 7.4 93 58-164 408-500 (526)
48 1ihk_A GLIA-activating factor; 34.3 36 0.0012 25.2 3.5 39 25-75 48-86 (174)
49 2vse_A MTX holotoxin, mosquito 30.4 2.2E+02 0.0076 26.2 8.7 85 24-132 295-383 (841)
50 3ef2_A Agglutinin, lectin; bet 27.6 2.3E+02 0.0079 22.5 11.7 83 33-133 43-126 (293)
51 3phz_A Ricin B-related lectin; 27.3 2.4E+02 0.0081 22.5 7.9 102 34-162 45-148 (286)
52 1ups_A Glcnac-alpha-1,4-GAL-re 26.1 2.8E+02 0.0096 22.9 8.1 59 60-133 292-351 (420)
53 3snv_A Symfoil-4T/permutation 24.9 1.8E+02 0.0062 20.4 10.5 81 27-135 32-112 (143)
54 2y9f_A LSL-150, hemolytic lect 24.3 2E+02 0.0067 20.5 6.3 91 57-164 10-102 (150)
55 3cvb_A Plastocyanin; cupredoxi 24.3 48 0.0016 21.2 2.5 30 50-79 19-49 (105)
56 3f1r_A FGF-20, fibroblast grow 23.9 91 0.0031 23.8 4.2 17 58-74 106-122 (211)
57 2x2s_A Agglutinin, agglutinin 23.8 2.1E+02 0.0071 20.6 8.7 84 64-162 14-101 (153)
58 3snv_A Symfoil-4T/permutation 21.2 2.2E+02 0.0075 19.9 9.7 42 84-134 28-69 (143)
No 1
>3mal_A Stromal cell-derived factor 2-like protein; trefoil fold, MIR motifs, unfolded protein response, putativ binding protein, plant protein; 1.95A {Arabidopsis thaliana} SCOP: b.42.6.0
Probab=100.00 E-value=6e-57 Score=353.99 Aligned_cols=171 Identities=81% Similarity=1.382 Sum_probs=159.9
Q ss_pred CccCCCeeEEEeecccCCCCCCceecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecCCCCCC
Q 030721 1 MHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPI 80 (172)
Q Consensus 1 ~h~~t~~~LHSh~~~y~~gs~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p~ 80 (172)
||..|+.|||||...||.||+|||||||.+..|.||+|+|++........+++|++||+|||+|+.|++|||||++++|+
T Consensus 27 ~h~~t~~~LHSH~~~yp~gS~qQqVT~y~~~~D~Nn~W~I~~~~~~~~~~~~~v~~gd~IRL~H~~T~~~LhSH~~~~P~ 106 (199)
T 3mal_A 27 MHEKTKFRLHSHDVPYGSGSGQQSVTGFPGVVDSNSYWIVKPVPGTTEKQGDAVKSGATIRLQHMKTRKWLHSHLHASPI 106 (199)
T ss_dssp EETTTCCEEEEEEEECSSTTCCEEEEEECCSCCGGGCEEEECCTTSSCCTTSBCBTTCEEEEEETTTCCEEEEEEEECTT
T ss_pred EECCCCCcceeCCccCCCCCCCEEEEeeCCCCCCCCEEEEEecCcCCcCCCcEeecCCEEEEEECCCCCCEeECCcCCCC
Confidence 58999999999999999999999999999866889999999887666667899999999999999999999999999999
Q ss_pred CCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCCCCCCCCCCCeeEEEEcCCCCCCcEEE
Q 030721 81 SGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVREKRADNVWLA 160 (172)
Q Consensus 81 S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~~lp~~~~~q~EV~c~~~~~~~~~W~v 160 (172)
|++||||||++.+.+|.+|.|+||+.+.++.++.++.|||+|+.|||||++|+.+||+|+++|+||+|.+.++.+++|+|
T Consensus 107 s~~~EVs~~~~~~~~D~~d~W~Vei~~~~~~~~~~~~fRL~H~~T~~yL~sh~~~lp~wg~~Q~EV~~~~~~~~~~~W~v 186 (199)
T 3mal_A 107 SGNLEVSCFGDDTNSDTGDHWKLIIEGSGKTWKQDQRVRLQHIDTSGYLHSHDKKYQRIAGGQQEVCGIREKKADNIWLA 186 (199)
T ss_dssp TCSEEEEEECBTTBCCGGGCEEEEESSSCCBCBTTCEEEEEETTTCCEEEEEEEECCSSSTTCEEEEEESSCCGGGCEEE
T ss_pred CCCeEEEEeccCCCCCCCCeEEEEEcCCCCEEEcCCeEEEEECCCCeEEeeCCCCCCCCCCcceEEEeeCCCCCCCeEEe
Confidence 99999999997667899999999998878889999999999999999999999999999999999999987788999999
Q ss_pred EEeeeCCCCCC
Q 030721 161 AEGVYLPVTES 171 (172)
Q Consensus 161 e~~~~~~~~~~ 171 (172)
|+++|++++++
T Consensus 187 ee~~~~~~~~~ 197 (199)
T 3mal_A 187 AEGVYLPLNES 197 (199)
T ss_dssp EEEECCCCCC-
T ss_pred CccccCCcccc
Confidence 99999998875
No 2
>1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1
Probab=100.00 E-value=1e-53 Score=332.96 Aligned_cols=169 Identities=43% Similarity=0.765 Sum_probs=150.9
Q ss_pred CccCCCeeEEEeecccCCCCCCceecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecCCCCCC
Q 030721 1 MHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPI 80 (172)
Q Consensus 1 ~h~~t~~~LHSh~~~y~~gs~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p~ 80 (172)
+|+.|+.|||||...||+||+|||||||.+..|.||+|+|++.....+..+.+|++||+|||+|+.|++|||||++++|+
T Consensus 16 ~h~~t~~~LHSH~~~y~~gs~qQqVT~y~~~~D~nn~W~I~~~~~~~~~~~~~v~~Gd~IRL~H~~T~~~Lhsh~~~~p~ 95 (187)
T 1t9f_A 16 INANDGSRLHSHDVKYGSGSGQQSVTAVKNSDDINSHWQIFPALNAKCNRGDAIKCGDKIRLKHLTTGTFLHSHHFTAPL 95 (187)
T ss_dssp EETTTCCEEEEEEEECSSSSCCEEEEEESCSSCGGGCEEEEECTTCCCCTTCBCCTTCEEEEEETTTCCEEEEEEEECSS
T ss_pred EECCCCcccEeCCccCCCCCCceEEEEECCCCCCCCEEEEEecCCCccCCCCEeccCCEEEEEECCCCCCEeECCcCCCC
Confidence 58999999999999999999999999999844999999999988766677899999999999999999999999999999
Q ss_pred C-CCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCCCCCCCCCCCeeEEEEcCCCCCCcEE
Q 030721 81 S-GNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVREKRADNVWL 159 (172)
Q Consensus 81 S-~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~~lp~~~~~q~EV~c~~~~~~~~~W~ 159 (172)
+ .++|||||+..+.+|.+|.|+||+. +..|+.++.|||+|+.|||||++++.+||+|+++|+||+|.+.++.+++|+
T Consensus 96 s~~~~EVs~~g~~~~gd~~d~W~vei~--~~~~~~~~~fRL~H~~tg~yL~~~~~~lp~w~~~Q~EV~~~~~~~~~~~W~ 173 (187)
T 1t9f_A 96 SKQHQEVSAFGSEAESDTGDDWTVICN--GDEWLESEQFKLRHAVTGSYLSLSGQQFGRPIHGQREVVGTDSITGGSAWK 173 (187)
T ss_dssp CTTSEEEEEECCTTTCCGGGCEEEECS--SSSCBTTSEEEEEETTTCCEEEEEEEECCTTSTTCEEEEEESSCCTTCCEE
T ss_pred CCCceEEEEecccCCCCCCCeEEEEEc--CCEEecCCeEEEEECCcCeEEecCCcccCCCCCCceEEEEecCCCCCCEEE
Confidence 9 5899999997667899999999987 456889999999999999999999999999999999999998778899999
Q ss_pred EEEeeeCCCCCC
Q 030721 160 AAEGVYLPVTES 171 (172)
Q Consensus 160 ve~~~~~~~~~~ 171 (172)
||+++|+++++.
T Consensus 174 vee~~~~~~~~~ 185 (187)
T 1t9f_A 174 VAEGIYIKHQQK 185 (187)
T ss_dssp EECCC-------
T ss_pred ECcccccCCCCC
Confidence 999999988764
No 3
>3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A*
Probab=99.97 E-value=1e-31 Score=239.77 Aligned_cols=130 Identities=21% Similarity=0.315 Sum_probs=115.7
Q ss_pred CccCCCeeEEEeecccCCCCCCceecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecCCCCCC
Q 030721 1 MHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPI 80 (172)
Q Consensus 1 ~h~~t~~~LHSh~~~y~~gs~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p~ 80 (172)
+|+.||.|||||...||.||++||||+ .|.||.|.|.+........+.+|++||+|||+|..|++|||||++++|.
T Consensus 185 ~~~~tg~~LHSh~~~yp~gS~qQqVt~----~D~Nn~W~I~~~~~~~~~~~~~Vk~GDvIRL~H~~T~~~LhSH~~~~P~ 260 (604)
T 3uj4_A 185 NPVNAGQPLHASSHQLVDNPGANEVNS----VNANTSWKIVLFMKWSDNKDDILKGGDVVRLFHAEQEKFLTADEHRKKQ 260 (604)
T ss_dssp EESSSCSCEEEEEEECSSSTTCEEEEE----SSCCCEEEEEEEECGGGCCTTBCBTTCEEEEEETTTTEEEEEEEETTEE
T ss_pred EEcCCCCcEEeecccCCCCCCceEEEE----EcCCCeEEEEecCCCCcccCcccccCCEEEEEECCCCCCeecCCCCCCC
Confidence 588999999999999999999999996 5899999999876655557889999999999999999999999999998
Q ss_pred CCCeEEEEecCC-CCCCCCCcEEEEEcc----CCceeeeCCeEEEEEccCCeeeeecCC
Q 030721 81 SGNLEISCFGGE-EESDTGDYWRVMIEG----SGKTWRQDQRIRLQHVDTGGYLHSHPK 134 (172)
Q Consensus 81 S~~qeVs~~~~~-~~~d~~~~W~Ie~~~----~~~~~~~~~~~rL~H~~t~~~L~s~~~ 134 (172)
+..+|||||++. ..+|.++.|+||+.+ .|.+++.++.|||+|+.|||||++|+.
T Consensus 261 ~~~~eVs~yg~~~~~gd~ndlW~IEi~~~~~~~G~~~~~~s~fRLrH~~Tg~YL~s~~~ 319 (604)
T 3uj4_A 261 HVFLRTTGRQSATSATSSKALWEVEVVQHDPARGGAGYWNSLFRFKHLATGHYLAAEVD 319 (604)
T ss_dssp EEEEECCC--CTTCCCCGGGEEEEEECCSSTTCCCBCBTTCEEEEEETTTCCEEEEEEC
T ss_pred cceEEEeecccccCCCCCCCeEEEEEecCCcCCCCeEEecCeEEEEEcccCceeeeccC
Confidence 878999999865 579999999999974 356889999999999999999999965
No 4
>3mal_A Stromal cell-derived factor 2-like protein; trefoil fold, MIR motifs, unfolded protein response, putativ binding protein, plant protein; 1.95A {Arabidopsis thaliana} SCOP: b.42.6.0
Probab=99.96 E-value=7.5e-30 Score=200.00 Aligned_cols=111 Identities=31% Similarity=0.461 Sum_probs=95.1
Q ss_pred CCCCceeeeCCEEEEEeccCCCceeecCCCCCCC-CCeEEEEecCCCCCCCCCcEEEEEccC-----CceeeeCCeEEEE
Q 030721 48 AKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPIS-GNLEISCFGGEEESDTGDYWRVMIEGS-----GKTWRQDQRIRLQ 121 (172)
Q Consensus 48 ~~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p~S-~~qeVs~~~~~~~~d~~~~W~Ie~~~~-----~~~~~~~~~~rL~ 121 (172)
+.++..|.|||+|+|+|+.|++|||||.+.||.+ ++||||||++ .+|.||+|+|++..+ +++|+.++.|||+
T Consensus 12 ~~~~~~V~~Gs~VtL~h~~t~~~LHSH~~~yp~gS~qQqVT~y~~--~~D~Nn~W~I~~~~~~~~~~~~~v~~gd~IRL~ 89 (199)
T 3mal_A 12 GKEGVEITYGSAIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPG--VVDSNSYWIVKPVPGTTEKQGDAVKSGATIRLQ 89 (199)
T ss_dssp ----CBCBTTCEEEEEETTTCCEEEEEEEECSSTTCCEEEEEECC--SCCGGGCEEEECCTTSSCCTTSBCBTTCEEEEE
T ss_pred CCCCCEEeeCCEEEEEECCCCCcceeCCccCCCCCCCEEEEeeCC--CCCCCCEEEEEecCcCCcCCCcEeecCCEEEEE
Confidence 4678999999999999999999999999999985 7999999985 368899999997643 5689999999999
Q ss_pred EccCCeeeeecCCCCCCCCCCCeeEEEEcCC---CCCCcEEEEE
Q 030721 122 HVDTGGYLHSHPKKYQRIAGGQQEVCGVREK---RADNVWLAAE 162 (172)
Q Consensus 122 H~~t~~~L~s~~~~lp~~~~~q~EV~c~~~~---~~~~~W~ve~ 162 (172)
|+.|+|||++|+.+ +|+++|+||+|+... +.++.|+||.
T Consensus 90 H~~T~~~LhSH~~~--~P~s~~~EVs~~~~~~~~D~~d~W~Vei 131 (199)
T 3mal_A 90 HMKTRKWLHSHLHA--SPISGNLEVSCFGDDTNSDTGDHWKLII 131 (199)
T ss_dssp ETTTCCEEEEEEEE--CTTTCSEEEEEECBTTBCCGGGCEEEEE
T ss_pred ECCCCCCEeECCcC--CCCCCCeEEEEeccCCCCCCCCeEEEEE
Confidence 99999999999877 566789999999764 5688999986
No 5
>1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1
Probab=99.95 E-value=5.4e-28 Score=187.87 Aligned_cols=110 Identities=22% Similarity=0.368 Sum_probs=95.2
Q ss_pred CCCceeeeCCEEEEEeccCCCceeecCCCCCC-CCCeEEEEecCCCCCCCCCcEEEEEcc-----CCceeeeCCeEEEEE
Q 030721 49 KQGDTIKSGTIIRLQHMRTRKWLHSHLHASPI-SGNLEISCFGGEEESDTGDYWRVMIEG-----SGKTWRQDQRIRLQH 122 (172)
Q Consensus 49 ~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p~-S~~qeVs~~~~~~~~d~~~~W~Ie~~~-----~~~~~~~~~~~rL~H 122 (172)
..+..|+|||+|+|+|+.|++|||||.++||. |++||||||++ .+|.|++|+|+... .+++|+.++.|||+|
T Consensus 2 s~~~~V~~Gs~I~L~h~~t~~~LHSH~~~y~~gs~qQqVT~y~~--~~D~nn~W~I~~~~~~~~~~~~~v~~Gd~IRL~H 79 (187)
T 1t9f_A 2 SDEDFVTCYSVLKFINANDGSRLHSHDVKYGSGSGQQSVTAVKN--SDDINSHWQIFPALNAKCNRGDAIKCGDKIRLKH 79 (187)
T ss_dssp CTTCBCBTTCEEEEEETTTCCEEEEEEEECSSSSCCEEEEEESC--SSCGGGCEEEEECTTCCCCTTCBCCTTCEEEEEE
T ss_pred CCCCEEEeCCEEEEEECCCCcccEeCCccCCCCCCceEEEEECC--CCCCCCEEEEEecCCCccCCCCEeccCCEEEEEE
Confidence 35788999999999999999999999998875 68999999986 24899999998754 257899999999999
Q ss_pred ccCCeeeeecCCCCCCCCC-CCeeEEEEcCC---CCCCcEEEEE
Q 030721 123 VDTGGYLHSHPKKYQRIAG-GQQEVCGVREK---RADNVWLAAE 162 (172)
Q Consensus 123 ~~t~~~L~s~~~~lp~~~~-~q~EV~c~~~~---~~~~~W~ve~ 162 (172)
+.|++||++|+.+ +|+. .++||+|+... +.++.|+||.
T Consensus 80 ~~T~~~Lhsh~~~--~p~s~~~~EVs~~g~~~~gd~~d~W~vei 121 (187)
T 1t9f_A 80 LTTGTFLHSHHFT--APLSKQHQEVSAFGSEAESDTGDDWTVIC 121 (187)
T ss_dssp TTTCCEEEEEEEE--CSSCTTSEEEEEECCTTTCCGGGCEEEEC
T ss_pred CCCCCCEeECCcC--CCCCCCceEEEEecccCCCCCCCeEEEEE
Confidence 9999999999754 7776 78999999753 4578999994
No 6
>3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A*
Probab=99.93 E-value=1.1e-25 Score=200.90 Aligned_cols=153 Identities=16% Similarity=0.252 Sum_probs=130.2
Q ss_pred CccCCCeeEEEeec-ccCCCCCCceecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecCCCCC
Q 030721 1 MHEKTKFRLHSHEV-PYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASP 79 (172)
Q Consensus 1 ~h~~t~~~LHSh~~-~y~~gs~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p 79 (172)
+|+.|+.||+++.. .+..++..+.|++... .+.+.+|.|.|.... ...++.|.+||.|+|+|+.||+|||||...||
T Consensus 124 ~H~~S~kyL~~~~~~~a~~e~~~~~V~L~~~-~~e~s~F~I~P~~k~-~~eGe~V~~Gd~V~L~~~~tg~~LHSh~~~yp 201 (604)
T 3uj4_A 124 LHLKSNKYLTVNKRLPALLEKNAMRVTLDEA-GNEGSWFYIQPFYKL-RSIGDSVVIGDKVVLNPVNAGQPLHASSHQLV 201 (604)
T ss_dssp EETTTTEEEEEEEEEECSSSTTCEEEEEESS-CCGGGCEEEEESSTT-SCTTSBCBTTCEEEEEESSSCSCEEEEEEECS
T ss_pred EEcccCcEEEEcCCCcccccCCceEEEEEec-CCCCeEEEEecCccc-ccCCCeEeeCCEEEEEEcCCCCcEEeecccCC
Confidence 49999999999984 4566788999999997 789999999988643 45788999999999999999999999999999
Q ss_pred CC-CCeEEEEecCCCCCCCCCcEEEEEccC-----CceeeeCCeEEEEEccCCeeeeecCCCCCCCCCCCeeEEEEcCC-
Q 030721 80 IS-GNLEISCFGGEEESDTGDYWRVMIEGS-----GKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVREK- 152 (172)
Q Consensus 80 ~S-~~qeVs~~~~~~~~d~~~~W~Ie~~~~-----~~~~~~~~~~rL~H~~t~~~L~s~~~~lp~~~~~q~EV~c~~~~- 152 (172)
-+ ++||||| .|.|+.|+|+.... +.+++.|+.|||+|..|++||++|+.+ +|...++||+|++..
T Consensus 202 ~gS~qQqVt~------~D~Nn~W~I~~~~~~~~~~~~~Vk~GDvIRL~H~~T~~~LhSH~~~--~P~~~~~eVs~yg~~~ 273 (604)
T 3uj4_A 202 DNPGANEVNS------VNANTSWKIVLFMKWSDNKDDILKGGDVVRLFHAEQEKFLTADEHR--KKQHVFLRTTGRQSAT 273 (604)
T ss_dssp SSTTCEEEEE------SSCCCEEEEEEEECGGGCCTTBCBTTCEEEEEETTTTEEEEEEEET--TEEEEEEECCC--CTT
T ss_pred CCCCceEEEE------EcCCCeEEEEecCCCCcccCcccccCCEEEEEECCCCCCeecCCCC--CCCcceEEEeeccccc
Confidence 74 7999997 48999999987542 468999999999999999999999877 567778899998642
Q ss_pred ---CCCCcEEEEEe
Q 030721 153 ---RADNVWLAAEG 163 (172)
Q Consensus 153 ---~~~~~W~ve~~ 163 (172)
+.+++|+||..
T Consensus 274 ~~gd~ndlW~IEi~ 287 (604)
T 3uj4_A 274 SATSSKALWEVEVV 287 (604)
T ss_dssp CCCCGGGEEEEEEC
T ss_pred CCCCCCCeEEEEEe
Confidence 56889999964
No 7
>2xoa_A Ryanodine receptor 1; metal transport, calcium channel, ION channel, membrane PROT malignant hyperthermia, cardiac arrhythmia; 2.50A {Oryctolagus cuniculus}
Probab=99.83 E-value=2.9e-20 Score=164.97 Aligned_cols=147 Identities=16% Similarity=0.223 Sum_probs=113.0
Q ss_pred CccCCCeeEEEeecccCCC-CCCceecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCcee-ecCCCC
Q 030721 1 MHEKTKFRLHSHEVPYGSG-SGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLH-SHLHAS 78 (172)
Q Consensus 1 ~h~~t~~~LHSh~~~y~~g-s~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lh-sh~~~~ 78 (172)
+|+.++.|||++...+..+ ...|.||+.....+.|.+|.|.|... ....+++|++||.|+|+|+.|++||| || +
T Consensus 110 ~H~~S~~~L~~~~~~~s~~ek~a~~V~L~~~~~~~~s~f~I~p~~k-~r~~G~~V~~Gd~V~L~~~~t~~~LH~S~---~ 185 (559)
T 2xoa_A 110 RHAHSRMYLSCLTTSRSMTDKLAFDVGLQEDATGEACWWTMHPASK-QRSEGEKVRVGDDLILVSVSSERYLHLST---A 185 (559)
T ss_dssp EETTTCCEEEECSCCC----CCCEEEEEESSCCSSTTEEEEEESST-TSCTTSBCBTTCEEEEEETTTCCEEEEEC----
T ss_pred eecccCeEEEEcCcCcccccccceEEEEEecCCCCCcEEEEEcCcc-ccCCCCccccCCEEEEEECCCCCcccccC---C
Confidence 4899999999987665332 23479999965589999999998874 56788999999999999999999999 55 4
Q ss_pred CCCCCeEEEEecCCCCCCCCCcEEEEEccC---CceeeeCCeEEEEEccCCeeeeecCCCCCCCCCCCeeEEEEcCC---
Q 030721 79 PISGNLEISCFGGEEESDTGDYWRVMIEGS---GKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVREK--- 152 (172)
Q Consensus 79 p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~---~~~~~~~~~~rL~H~~t~~~L~s~~~~lp~~~~~q~EV~c~~~~--- 152 (172)
| +.+||+|+ |.++.|+|.+... ..+++.|+.|||.|..|++||+.+.. +...|.||+|++..
T Consensus 186 ~--gs~eVt~~------d~nt~W~I~~~~~~~~~~~l~~GDvIRL~H~~t~~~L~~~~~----~s~~~~ev~~y~~~~~~ 253 (559)
T 2xoa_A 186 S--GELQVDAS------FMQTLWNMNPICSCCEEGYVTGGHVLRLFHGHMDECLTISAA----DSDDQRRLVYYEGGAVC 253 (559)
T ss_dssp -----CEEEEE------SSCCCEEEEEEECCCCTTBCBTTCEEEEECC---CEEEECCT----TCTTTTCBEEEECGGGG
T ss_pred C--CCeEEEec------cCCCeEEEEEcccCCccccccCCCEEEEEecCCCceeeccCC----CcccceEEEeecCCCcC
Confidence 4 35699984 5788999987643 45899999999999999999997642 23568899999753
Q ss_pred -CCCCcEEEEEe
Q 030721 153 -RADNVWLAAEG 163 (172)
Q Consensus 153 -~~~~~W~ve~~ 163 (172)
+.+++|+||..
T Consensus 254 ~d~~~~W~VE~v 265 (559)
T 2xoa_A 254 THARSLWRLEPL 265 (559)
T ss_dssp GSGGGCEEEEES
T ss_pred CCCCceEEEEEe
Confidence 45789999864
No 8
>2xoa_A Ryanodine receptor 1; metal transport, calcium channel, ION channel, membrane PROT malignant hyperthermia, cardiac arrhythmia; 2.50A {Oryctolagus cuniculus}
Probab=99.83 E-value=4.7e-21 Score=170.05 Aligned_cols=135 Identities=21% Similarity=0.293 Sum_probs=100.6
Q ss_pred CccCCCeeEE-EeecccCCCCCCceecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecCCCCC
Q 030721 1 MHEKTKFRLH-SHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASP 79 (172)
Q Consensus 1 ~h~~t~~~LH-Sh~~~y~~gs~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p 79 (172)
+|+.||.||| || || |+ ++||++ |.|+.|.|.+...... ..+|++||+|||.|..|++|||++..
T Consensus 172 ~~~~t~~~LH~S~---~~-gs--~eVt~~----d~nt~W~I~~~~~~~~--~~~l~~GDvIRL~H~~t~~~L~~~~~--- 236 (559)
T 2xoa_A 172 VSVSSERYLHLST---AS-GE--LQVDAS----FMQTLWNMNPICSCCE--EGYVTGGHVLRLFHGHMDECLTISAA--- 236 (559)
T ss_dssp EETTTCCEEEEEC----------CEEEEE----SSCCCEEEEEEECCCC--TTBCBTTCEEEEECC---CEEEECCT---
T ss_pred EECCCCCcccccC---CC-CC--eEEEec----cCCCeEEEEEcccCCc--cccccCCCEEEEEecCCCceeeccCC---
Confidence 4788899999 66 54 33 589985 6789999998765422 78999999999999999999997653
Q ss_pred CC-CCeEEEEecCCC-CCCCCCcEEEEEccC---CceeeeCCeEEEEEccCCeeeeecCCCC-----CCCCCCCeeEEEE
Q 030721 80 IS-GNLEISCFGGEE-ESDTGDYWRVMIEGS---GKTWRQDQRIRLQHVDTGGYLHSHPKKY-----QRIAGGQQEVCGV 149 (172)
Q Consensus 80 ~S-~~qeVs~~~~~~-~~d~~~~W~Ie~~~~---~~~~~~~~~~rL~H~~t~~~L~s~~~~l-----p~~~~~q~EV~c~ 149 (172)
.+ +++||++|+... .+|.++.|+||+.+. |..++.++.|||+|+.|||||+++...- +++.....++.|.
T Consensus 237 ~s~~~~ev~~y~~~~~~~d~~~~W~VE~v~~~~~G~~~~~~~~fRLrH~~TG~YL~~~~~~~~~~~~~~~~~~~~s~F~f 316 (559)
T 2xoa_A 237 DSDDQRRLVYYEGGAVCTHARSLWRLEPLRISWSGSHLRWGQPLRIRHVTTGRYLALTEDQGLVVVDACKAHTKATSFCF 316 (559)
T ss_dssp TCTTTTCBEEEECGGGGGSGGGCEEEEESCSTTTTSBCCTTCCEEEEETTTCCEEEEETTTEEEEECGGGCCHHHHCEEE
T ss_pred CcccceEEEeecCCCcCCCCCceEEEEEeccccCCCceEeCCeEEEEECCcCCeeeEcCCCCcccccccccCCCccEEEE
Confidence 34 578999999643 368899999999754 6788899999999999999999987531 2334445667775
Q ss_pred c
Q 030721 150 R 150 (172)
Q Consensus 150 ~ 150 (172)
.
T Consensus 317 ~ 317 (559)
T 2xoa_A 317 R 317 (559)
T ss_dssp E
T ss_pred e
Confidence 3
No 9
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=99.64 E-value=5.8e-17 Score=137.92 Aligned_cols=86 Identities=22% Similarity=0.365 Sum_probs=60.5
Q ss_pred CCCceeeeCCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCC-CCCCCCCcEEEEEcc----CCceeeeCCeEEEEEc
Q 030721 49 KQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGE-EESDTGDYWRVMIEG----SGKTWRQDQRIRLQHV 123 (172)
Q Consensus 49 ~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~-~~~d~~~~W~Ie~~~----~~~~~~~~~~~rL~H~ 123 (172)
....+|++||+|||.|..|+++||+|.+.++..-..||||++.. ..+|+++.|+||+.+ .|..++.++.|||+|+
T Consensus 6 ~~~~~v~~GdvIRL~H~~t~~~Lhs~~~~~~~~v~~~~s~~~s~~~~~d~~s~W~IE~~~~~~~~G~~~~~~~~fRLrH~ 85 (381)
T 1n4k_A 6 NKDDILKGGDVVRLFHAEQEKFLTCDEHRKKQHVFLRTTGRQSATSATSSKALWEVEVVQHDPCRGGAGYWNSLFRFKHL 85 (381)
T ss_dssp -------CCCEEEEEETTTTEEEEEEECSSSEEEEEECCCSSSGGGCCCGGGCEEEEECC-------------CEEEEET
T ss_pred ccCCcccCCcEEEEEEcccCCeeecCCCCCccceeeeccCccCCCCCCCCCCeEEEEEeccCCCCCCceeeCCeEEEEEC
Confidence 34678999999999999999999999987653335688888754 468999999999975 3668889999999999
Q ss_pred cCCeeeeecCC
Q 030721 124 DTGGYLHSHPK 134 (172)
Q Consensus 124 ~t~~~L~s~~~ 134 (172)
.|||||+++..
T Consensus 86 ~Tg~yL~~~~~ 96 (381)
T 1n4k_A 86 ATGHYLAAEVD 96 (381)
T ss_dssp TTCCEEEEEEC
T ss_pred CCCceeeEEec
Confidence 99999999854
No 10
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=99.33 E-value=4.7e-12 Score=107.63 Aligned_cols=157 Identities=15% Similarity=0.169 Sum_probs=78.9
Q ss_pred ccCCCeeEEEeecc------cCCCCCCceecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecC
Q 030721 2 HEKTKFRLHSHEVP------YGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHL 75 (172)
Q Consensus 2 h~~t~~~LHSh~~~------y~~gs~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~ 75 (172)
|..|+.+||||... | .+|++++++ ...|.|++|.|+..... ...+..+++|+.+||+|..||+||++|.
T Consensus 21 H~~t~~~Lhs~~~~~~~~v~~-~~s~~~s~~---~~~d~~s~W~IE~~~~~-~~~G~~~~~~~~fRLrH~~Tg~yL~~~~ 95 (381)
T 1n4k_A 21 HAEQEKFLTCDEHRKKQHVFL-RTTGRQSAT---SATSSKALWEVEVVQHD-PCRGGAGYWNSLFRFKHLATGHYLAAEV 95 (381)
T ss_dssp ETTTTEEEEEEECSSSEEEEE-ECCCSSSGG---GCCCGGGCEEEEECC--------------CEEEEETTTCCEEEEEE
T ss_pred EcccCCeeecCCCCCccceee-eccCccCCC---CCCCCCCeEEEEEeccC-CCCCCceeeCCeEEEEECCCCceeeEEe
Confidence 88999999997642 3 245555543 23688999999977422 3457789999999999999999999997
Q ss_pred CCCCCCCCeE-EE---Ee-----cCCCCCCCCCcEEEEEccC------------------CceeeeCCeEEEEEccCCee
Q 030721 76 HASPISGNLE-IS---CF-----GGEEESDTGDYWRVMIEGS------------------GKTWRQDQRIRLQHVDTGGY 128 (172)
Q Consensus 76 ~~~p~S~~qe-Vs---~~-----~~~~~~d~~~~W~Ie~~~~------------------~~~~~~~~~~rL~H~~t~~~ 128 (172)
.........+ .. +. ......+....|.+..... ...++.++-|||+|+.||.+
T Consensus 96 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~f~l~~~~~~~d~~s~f~l~~~~~~~~d~~v~~~Sy~rl~H~~t~~W 175 (381)
T 1n4k_A 96 DPDFEEECLEFQPSVDPDQDASRSRLRNAQEKMVYSLVSVPEGNDISSIFELDPTTLRGGDSLVPRNSYVRLRHLCTNTW 175 (381)
T ss_dssp C-------------------------------CCEEEEEESCSCSGGGCEEEEC--------------CBEEEEGGGTEE
T ss_pred cCcccccccccccccccccccccccccCCCcCceEEEEecCccCCchhhhccCcccccccccccccCceEEEEEcccCce
Confidence 5432211111 00 00 0000001234455544221 13566777789999999999
Q ss_pred eeecCCCCCC-CC-CCCeeEEEEcCCCCCCcEEEEEe
Q 030721 129 LHSHPKKYQR-IA-GGQQEVCGVREKRADNVWLAAEG 163 (172)
Q Consensus 129 L~s~~~~lp~-~~-~~q~EV~c~~~~~~~~~W~ve~~ 163 (172)
|++....+.. +- .--.+|.|.......+.+.|-..
T Consensus 176 l~~~~~~~~~~~~~~~l~~l~~~~~~e~~~aF~I~~v 212 (381)
T 1n4k_A 176 VHSTNIPIDKEEEKPVMLKIGTSPLKEDKEAFAIVPV 212 (381)
T ss_dssp EEEEEEESCCSSSSCCEEEEEEESSCCSSCCEEEEEC
T ss_pred EEeeccccCcccccceeeeeeeccceeeccceEEEEc
Confidence 9986443211 11 11134677665556667766544
No 11
>3im6_A Cardiac Ca2+ release channel; ryanodine receptor 2, calcium release channel, ION channel, arrhythmia, CPVT, ARVD2, ARVC2, disease mutation; 1.70A {Mus musculus} PDB: 3im5_A 3im7_A 3qr5_A 3ila_A 3hsm_A
Probab=98.79 E-value=6.5e-08 Score=75.27 Aligned_cols=104 Identities=17% Similarity=0.239 Sum_probs=76.2
Q ss_pred CCceeeeCCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEcc----CCceeeeCCeEEEEEccC
Q 030721 50 QGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEG----SGKTWRQDQRIRLQHVDT 125 (172)
Q Consensus 50 ~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~----~~~~~~~~~~~rL~H~~t 125 (172)
..+.|.||..|.|.|..+++||..+...+..+...-|...-....+....+|+|.+.- +|+.+..++.|.|.++.+
T Consensus 109 ~~r~v~YGq~IQLlH~~SnkyLtv~~~~~sek~~lrv~LgL~d~~~se~swF~I~P~yK~RseGd~V~~GD~ViL~sv~s 188 (217)
T 3im6_A 109 GHRTLLYGHAILLRHSYSGMYLCCLSTSRSSTDKLAFDVGLQEDTTGEACWWTIHPASKQRSEGEKVRVGDDLILVSMSS 188 (217)
T ss_dssp -CCBCBTTCEEEEEETTTCCEEEECSCC------CCEEEEEESCCSSSTTEEEEEESSSCCCTTCBCBTTCEEEEEETTT
T ss_pred CCceEEeccEEEeeecccCcEEEEcCCCcccccCcEEEEEeccCCCCcceEEEEEccEeeccCCCceeeCCEEEEEECCC
Confidence 4589999999999999999999998765543334445542111135678899999863 478899999999999999
Q ss_pred CeeeeecCCCCCCCCCCCeeEEEEcCCCCCCcEEEEE
Q 030721 126 GGYLHSHPKKYQRIAGGQQEVCGVREKRADNVWLAAE 162 (172)
Q Consensus 126 ~~~L~s~~~~lp~~~~~q~EV~c~~~~~~~~~W~ve~ 162 (172)
+.||+.+.. .+-.||.|. ...+.|.|-.
T Consensus 189 ~~yLH~S~~------~g~~eVn~s---~~~T~W~i~p 216 (217)
T 3im6_A 189 ERYLHLSYG------NSSWHVDAA---FQQTLWSVAP 216 (217)
T ss_dssp CCEEEEEEC------SSSEEEEEE---SSCCCEEEEE
T ss_pred CceEEeecC------CCceEEeee---cCCceeEEee
Confidence 999997632 356799996 3678999853
No 12
>1xzz_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3 receptor suppressor domain, calcium channe trefoil fold, membrane protein; 1.80A {Mus musculus} PDB: 3jrr_A
Probab=98.74 E-value=4.9e-08 Score=78.32 Aligned_cols=106 Identities=19% Similarity=0.351 Sum_probs=83.6
Q ss_pred CCceeeeCCEEEEEeccCCCceeecCCC-CCCC-CCeEEEEecCCCCCCCCCcEEEEEcc----CCceeeeCCeEEEEEc
Q 030721 50 QGDTIKSGTIIRLQHMRTRKWLHSHLHA-SPIS-GNLEISCFGGEEESDTGDYWRVMIEG----SGKTWRQDQRIRLQHV 123 (172)
Q Consensus 50 ~~~~V~~g~~I~L~H~~T~~~Lhsh~~~-~p~S-~~qeVs~~~~~~~~d~~~~W~Ie~~~----~~~~~~~~~~~rL~H~ 123 (172)
.+.+|.||..|.|+|+.|++||...... +-+. ....|+.-.. +..+.+|+|.+.- .|+.+..++.|.|.++
T Consensus 126 ~g~~v~YG~~iqLlHv~S~kyLt~~~~~~a~~ek~a~~v~L~~~---~se~s~F~I~P~~k~r~eGd~V~~gD~V~l~~~ 202 (246)
T 1xzz_A 126 LGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEA---GNEGSWFYIQPFYKLRSIGDSVVIGDKVVLNPV 202 (246)
T ss_dssp TTCBCBTTCEEEEEETTTTEEEEEEEEEECSSSTTSEEEEEESS---CCGGGCEEEEESSTTSCTTSBCBTTCEEEEEES
T ss_pred CCCeEEeccEEEEEEcCCCcEEEEcCcCchhhcccceEEEEecC---CCCceEEEEeeceeecccCCceEECCEEEEEEC
Confidence 4689999999999999999999986643 3333 3678888543 7788999998853 4777888999999999
Q ss_pred cCCeeeeecCCCCCCCCCCCeeEEEEcCCCCCCcEEEEE
Q 030721 124 DTGGYLHSHPKKYQRIAGGQQEVCGVREKRADNVWLAAE 162 (172)
Q Consensus 124 ~t~~~L~s~~~~lp~~~~~q~EV~c~~~~~~~~~W~ve~ 162 (172)
.+++||+++...|+. -.+-.||.|. ...+.|+|.-
T Consensus 203 ~~~~~Lh~S~~~l~d-~~~~~eVn~~---~~~T~Wki~l 237 (246)
T 1xzz_A 203 NAGQPLHASSHQLVD-NPGCNEVNSV---NCNTSWKIVL 237 (246)
T ss_dssp SSCSCEEEEEEECSS-SSSCEEEEES---SCCCEEEEEE
T ss_pred CCCCcccccccccCC-CCCCcEEEee---cCCceeEEee
Confidence 999999987665653 3456899884 4678999864
No 13
>1xzz_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3 receptor suppressor domain, calcium channe trefoil fold, membrane protein; 1.80A {Mus musculus} PDB: 3jrr_A
Probab=97.98 E-value=4.6e-05 Score=60.95 Aligned_cols=98 Identities=17% Similarity=0.257 Sum_probs=71.6
Q ss_pred CccCCCeeEEEeecccC-CCCCCceecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecCCCCC
Q 030721 1 MHEKTKFRLHSHEVPYG-SGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASP 79 (172)
Q Consensus 1 ~h~~t~~~LHSh~~~y~-~gs~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p 79 (172)
+|+.++-||--....-. .-...+.|++... ...+++|.|.|...- ...+++|..||.|.|.++.++.|||.....++
T Consensus 139 lHv~S~kyLt~~~~~~a~~ek~a~~v~L~~~-~se~s~F~I~P~~k~-r~eGd~V~~gD~V~l~~~~~~~~Lh~S~~~l~ 216 (246)
T 1xzz_A 139 LHLKSNKYLTVNKRLPALLEKNAMRVTLDEA-GNEGSWFYIQPFYKL-RSIGDSVVIGDKVVLNPVNAGQPLHASSHQLV 216 (246)
T ss_dssp EETTTTEEEEEEEEEECSSSTTSEEEEEESS-CCGGGCEEEEESSTT-SCTTSBCBTTCEEEEEESSSCSCEEEEEEECS
T ss_pred EEcCCCcEEEEcCcCchhhcccceEEEEecC-CCCceEEEEeeceee-cccCCceEECCEEEEEECCCCCcccccccccC
Confidence 48888888866543311 1234488899776 788899999988643 34688899999999999999999998755554
Q ss_pred CC-CCeEEEEecCCCCCCCCCcEEEEEc
Q 030721 80 IS-GNLEISCFGGEEESDTGDYWRVMIE 106 (172)
Q Consensus 80 ~S-~~qeVs~~~~~~~~d~~~~W~Ie~~ 106 (172)
-. +..||-|. ..+..|.|...
T Consensus 217 d~~~~~eVn~~------~~~T~Wki~l~ 238 (246)
T 1xzz_A 217 DNPGCNEVNSV------NCNTSWKIVLF 238 (246)
T ss_dssp SSSSCEEEEES------SCCCEEEEEEE
T ss_pred CCCCCcEEEee------cCCceeEEeeh
Confidence 32 46799773 35568998764
No 14
>3im6_A Cardiac Ca2+ release channel; ryanodine receptor 2, calcium release channel, ION channel, arrhythmia, CPVT, ARVD2, ARVC2, disease mutation; 1.70A {Mus musculus} PDB: 3im5_A 3im7_A 3qr5_A 3ila_A 3hsm_A
Probab=97.67 E-value=0.0003 Score=54.73 Aligned_cols=92 Identities=15% Similarity=0.308 Sum_probs=60.4
Q ss_pred ccCCCeeEEEeecccCCCCCCceecc--cccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecCCCCC
Q 030721 2 HEKTKFRLHSHEVPYGSGSGQQSVTG--FPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASP 79 (172)
Q Consensus 2 h~~t~~~LHSh~~~y~~gs~~q~Vt~--~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p 79 (172)
|..++-||--+... +.-...+-|++ ......+..+|.|.|...- ...++.|+-||.|.|.++.++.|||....
T Consensus 123 H~~SnkyLtv~~~~-~sek~~lrv~LgL~d~~~se~swF~I~P~yK~-RseGd~V~~GD~ViL~sv~s~~yLH~S~~--- 197 (217)
T 3im6_A 123 HSYSGMYLCCLSTS-RSSTDKLAFDVGLQEDTTGEACWWTIHPASKQ-RSEGEKVRVGDDLILVSMSSERYLHLSYG--- 197 (217)
T ss_dssp ETTTCCEEEECSCC-------CCEEEEEESCCSSSTTEEEEEESSSC-CCTTCBCBTTCEEEEEETTTCCEEEEEEC---
T ss_pred ecccCcEEEEcCCC-cccccCcEEEEEeccCCCCcceEEEEEccEee-ccCCCceeeCCEEEEEECCCCceEEeecC---
Confidence 66666666544322 22223345554 2333467889999988643 34689999999999999999999997533
Q ss_pred CCCCeEEEEecCCCCCCCCCcEEEEE
Q 030721 80 ISGNLEISCFGGEEESDTGDYWRVMI 105 (172)
Q Consensus 80 ~S~~qeVs~~~~~~~~d~~~~W~Ie~ 105 (172)
.+..||.+.. .+..|.|-+
T Consensus 198 -~g~~eVn~s~------~~T~W~i~p 216 (217)
T 3im6_A 198 -NSSWHVDAAF------QQTLWSVAP 216 (217)
T ss_dssp -SSSEEEEEES------SCCCEEEEE
T ss_pred -CCceEEeeec------CCceeEEee
Confidence 3467998743 556798754
No 15
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=89.97 E-value=2.3 Score=30.98 Aligned_cols=77 Identities=9% Similarity=0.148 Sum_probs=52.3
Q ss_pred CEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCCCCC
Q 030721 58 TIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQ 137 (172)
Q Consensus 58 ~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~~lp 137 (172)
+.|+||-. .|+||..... --|+|... .......|.|+.. +..+.|++ .+|+||......
T Consensus 72 ~~v~LRs~-~GkYLs~~~~-------G~v~a~a~--~~g~~E~F~l~~~--------~G~~aLra-~nG~yl~~~~~g-- 130 (155)
T 2yug_A 72 SRIALKSG-YGKYLGINSD-------GLVVGRSD--AIGPREQWEPVFQ--------DGKMALLA-SNSCFIRCNEAG-- 130 (155)
T ss_dssp SCEEEEET-TSCBEEECSS-------SBEEECCS--SCCTTTBEEEECS--------TTCCEEEE-TTSCBEEECSSS--
T ss_pred CEEEEEeC-CCCEEEecCC-------CcEEeccC--CCCCCCEEEEEEE--------CCEEEEEe-CCCCEEEEcCCC--
Confidence 47999974 4999987432 24666554 3457788987653 24678999 799999986422
Q ss_pred CCCCCCeeEEEEcC-CCCCCcEEEEE
Q 030721 138 RIAGGQQEVCGVRE-KRADNVWLAAE 162 (172)
Q Consensus 138 ~~~~~q~EV~c~~~-~~~~~~W~ve~ 162 (172)
.+.|... ......|.++.
T Consensus 131 -------~l~a~a~~~~~~E~f~v~l 149 (155)
T 2yug_A 131 -------DIEAKNKTAGEEEMIKIRS 149 (155)
T ss_dssp -------CEEECCSCCCTTTCCEEEE
T ss_pred -------cEEEecCCCCCCcEEEEEE
Confidence 3777654 24567888864
No 16
>2fdb_M FGF8B, fibroblast growth factor 8 isoform B; beta-trefoil fold, immunoglobulin fold, hormone/growth factor/transferase complex; 2.28A {Homo sapiens} SCOP: b.42.1.1
Probab=87.62 E-value=4.7 Score=29.79 Aligned_cols=61 Identities=21% Similarity=0.300 Sum_probs=42.4
Q ss_pred EEEEEec---cCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCC
Q 030721 59 IIRLQHM---RTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 134 (172)
Q Consensus 59 ~I~L~H~---~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~ 134 (172)
.||+++. .+|.+|..+. +..|.+..+. .+....|+|+.+ ..+..|+|+.+.|+.||+-+..
T Consensus 28 ~~R~~qLY~rt~g~~LqI~~-------dG~V~Gt~~~--~~~~s~L~~~s~------~~g~~V~I~gv~s~~YLcMn~~ 91 (164)
T 2fdb_M 28 LIRTYQLYSRTSGKHVQVLA-------NKRINAMAED--GDPFAKLIVETD------TFGSRVRVRGAETGLYICMNKK 91 (164)
T ss_dssp CEEEEEEEETTTSSEEEECT-------TSCEEEEECT--TCGGGCEEEEEE------ETTTEEEEEETTTCCEEEECTT
T ss_pred cceEEEEEEccCCeEEEECC-------CCcEEeeccC--CCcceEEEEEEe------ccceEEEEEEeccCcEEEEcCC
Confidence 4444443 3478998863 3467777752 466678888765 3346899999999999998744
No 17
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=86.64 E-value=2.8 Score=36.37 Aligned_cols=99 Identities=19% Similarity=0.284 Sum_probs=73.3
Q ss_pred CeeEEEeecccCCCCCCceecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecCCCCCCCCCeE
Q 030721 6 KFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLE 85 (172)
Q Consensus 6 ~~~LHSh~~~y~~gs~~q~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p~S~~qe 85 (172)
.++|-||.-.|=...+.=.|+|-....+....|.|++.. .-.-.|+....|+||.+. ...
T Consensus 59 ~~~lks~~G~yL~~d~~G~v~~~~~~~~~~~~f~~~~~~------------dG~w~lq~~~~g~yl~~~--------~~~ 118 (493)
T 3llp_A 59 AVCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHD------------DGRWSLQSEAHRRYFGGT--------EDR 118 (493)
T ss_dssp CBCEECTTSCEEEECTTSCEEEEESSCCGGGCEEEEECT------------TSEEEEEETTTCCEEEEE--------BTE
T ss_pred EEEEecCCCcEeecCCCCcEEeCcccCCCCceEEEEECC------------CCeEEEEEcccCceecCC--------Cce
Confidence 588999998884444455677777767778888887331 147889999999999875 358
Q ss_pred EEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecC
Q 030721 86 ISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHP 133 (172)
Q Consensus 86 Vs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~ 133 (172)
|+|++.. ..+...|.|.+. .--.|-|+++..+||.+.+.
T Consensus 119 ~~c~~~~--~~~~~~w~~~la-------~hpqv~l~s~~r~~y~~l~~ 157 (493)
T 3llp_A 119 LSCFAQT--VSPAEKWSVHIA-------MHPQVNIYSVTRKRYAHLSA 157 (493)
T ss_dssp EEEEESS--CCGGGCEEEEEC-------SCCEEEEEETTTTEEEEEEC
T ss_pred EEEEecc--CCccceeeeeec-------cCcEEEEeecccceeEEcCC
Confidence 9999852 446688998774 34678888888899888753
No 18
>1bfg_A Basic fibroblast growth factor; 1.60A {Homo sapiens} SCOP: b.42.1.1 PDB: 1iil_A 1ii4_A 1bas_A 1bla_A 1bld_A 1bfb_A* 1bfc_A* 4fgf_A 1fga_A 2fgf_A 1ev2_A 1cvs_A 1fq9_A* 1bff_A 2bfh_A
Probab=86.47 E-value=4.4 Score=29.34 Aligned_cols=64 Identities=16% Similarity=0.118 Sum_probs=44.2
Q ss_pred eeCCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCC
Q 030721 55 KSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 134 (172)
Q Consensus 55 ~~g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~ 134 (172)
..+..++|.....|.+|..+. +--|.+..+ ..+....|.|+.+. . ..|+|+.+.|+.||+-+..
T Consensus 16 ~~~r~~rLY~r~~g~~LqI~~-------dG~V~Gt~~--~~~~~s~l~i~sv~------~-G~V~I~gv~s~~YLcMn~~ 79 (146)
T 1bfg_A 16 HFKDPKRLYCKNGGFFLRIHP-------DGRVDGVRE--KSDPHIKLQLQAEE------R-GVVSIKGVSANRYLAMKED 79 (146)
T ss_dssp ---CCEEEEETTTTEEEEECT-------TSCEEEECC--TTCGGGCEEEEECS------T-TEEEEEETTTTEEEEECTT
T ss_pred CcCccEEEEEcCCCEEEEECC-------CCeEEeecC--CCCCceEEEEEecc------C-CEEEEEEcccCcEEEEcCC
Confidence 345667887655588998864 345777764 24566778887753 2 3899999999999998743
No 19
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=86.15 E-value=3.3 Score=35.97 Aligned_cols=107 Identities=9% Similarity=0.179 Sum_probs=68.8
Q ss_pred eecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEE
Q 030721 24 SVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRV 103 (172)
Q Consensus 24 ~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~I 103 (172)
.|++....+----.|++++..+.. .++.|+|+ ...|+||.+.. .--|+|-.. ..+....|.|
T Consensus 32 ~vna~~~~l~~rQvw~l~~~~~~~--------~~~~~~lk-s~~G~yL~~d~-------~G~v~~~~~--~~~~~~~f~~ 93 (493)
T 3llp_A 32 KVNASASSLKKKQIWTLEQPPDEA--------GSAAVCLR-SHLGRYLAADK-------DGNVTCERE--VPGPDCRFLI 93 (493)
T ss_dssp CEEEEESSCCGGGCEEEC-----C--------CCCCBCEE-CTTSCEEEECT-------TSCEEEEES--SCCGGGCEEE
T ss_pred EEEeccCCccceEEEEEEecCCCC--------CccEEEEe-cCCCcEeecCC-------CCcEEeCcc--cCCCCceEEE
Confidence 334444434444467776332210 13467777 44599997743 356888764 3667788999
Q ss_pred EEccCCceeeeCCeEEEEEccCCeeeeecCCCCCCCCCCCeeEEEEcCC-CCCCcEEEEEeee
Q 030721 104 MIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVREK-RADNVWLAAEGVY 165 (172)
Q Consensus 104 e~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~~lp~~~~~q~EV~c~~~~-~~~~~W~ve~~~~ 165 (172)
+...+ ..+.|+....|.||.+++.+ |+|.... .+..+|.|.--++
T Consensus 94 ~~~~d-------G~w~lq~~~~g~yl~~~~~~----------~~c~~~~~~~~~~w~~~la~h 139 (493)
T 3llp_A 94 VAHDD-------GRWSLQSEAHRRYFGGTEDR----------LSCFAQTVSPAEKWSVHIAMH 139 (493)
T ss_dssp EECTT-------SEEEEEETTTCCEEEEEBTE----------EEEEESSCCGGGCEEEEECSC
T ss_pred EECCC-------CeEEEEEcccCceecCCCce----------EEEEeccCCccceeeeeeccC
Confidence 87644 57899999999999988644 7898754 5678998865543
No 20
>1qql_A Fibroblast growth factor 7/1 chimera; beta-trefoil, hormone/growth factor complex; 2.30A {Rattus norvegicus} SCOP: b.42.1.1 PDB: 1qqk_A
Probab=84.04 E-value=3.8 Score=29.44 Aligned_cols=62 Identities=13% Similarity=0.150 Sum_probs=42.3
Q ss_pred CCEEEEEecc--CCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCC
Q 030721 57 GTIIRLQHMR--TRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 134 (172)
Q Consensus 57 g~~I~L~H~~--T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~ 134 (172)
|..+|+++.= ||.+|..++ +--|.+..+ ..+....|.|+.+. .+ .|+|+.+.|+.||+-+..
T Consensus 7 G~~~R~~~LY~r~g~~L~I~~-------dG~V~Gt~~--~~~~~s~l~~~sv~------~g-~V~I~gv~s~~YLcmn~~ 70 (140)
T 1qql_A 7 GGDIRVRRLFCRTQWYLRIDK-------RGKVKGTQE--MRNSYNIMEIRTVA------VG-IVAIKGVESEYYLAMNKE 70 (140)
T ss_dssp --CEEEECCEETTTEEEEECT-------TCCEEEESC--TTCSTTCEEEEEEE------TT-EEEEEETTTCCCCEECTT
T ss_pred CceeEEEEEEecCCeEEEECC-------CCeEEeecC--CCCCceEEEEEeec------CC-EEEEEEcccCcEEEEcCC
Confidence 4455555554 367887753 346887775 24677888887753 34 899999999999998643
No 21
>1q1u_A FGF-12, fibrobast growth factor homologous factor 1, FGF12B; human, hormone/growth factor complex; 1.70A {Homo sapiens} SCOP: b.42.1.1
Probab=83.91 E-value=7.8 Score=27.92 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=43.9
Q ss_pred CCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCC
Q 030721 57 GTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 134 (172)
Q Consensus 57 g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~ 134 (172)
|...+|.-- ||.+|..++ +-.|.++.+ ..+....|.|+.... ..|+|+.+.|+.||+-+..
T Consensus 10 g~~~~Ly~r-~g~~LqI~~-------dG~V~Gt~~--~~~~~sile~~sv~~-------g~V~I~gv~s~~YLcMn~~ 70 (144)
T 1q1u_A 10 GIVTRLFSQ-QGYFLQMHP-------DGTIDGTKD--ENSDYTLFNLIPVGL-------RVVAIQGVKASLYVAMNGE 70 (144)
T ss_dssp CEEEEEEET-TTEEEEECT-------TSCEEEESC--TTSGGGCEEEEEEET-------TEEEEEETTTCCEEEECTT
T ss_pred CceEEEEEc-CCeEEEECC-------CCcEeeecC--CCCCceeEEEEeccC-------CEEEEEEcccCcEEEEcCC
Confidence 666777776 589998864 245777764 234567788776532 5799999999999998754
No 22
>1rg8_A Heparin-binding growth factor 1; beta-trefoil, hormone/growth factor complex; 1.10A {Homo sapiens} SCOP: b.42.1.1 PDB: 1jqz_A 3fjb_A 1jt3_A 1jt4_A 1jtc_A 3baq_A 3bah_A 3fja_A 3fj9_A 3fjk_A 3hom_A 3fjc_A 3ba5_A 3fjh_A 1jt5_A 1k5v_A 3fjj_A 1jy0_A 3bao_A 3fjf_A ...
Probab=83.78 E-value=10 Score=27.39 Aligned_cols=60 Identities=15% Similarity=0.116 Sum_probs=42.8
Q ss_pred EEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCC
Q 030721 59 IIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 134 (172)
Q Consensus 59 ~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~ 134 (172)
.++|.-..+|.+|..++ +.-|.+..+ ..+....|.|+.+. .+ .|+|+.+.|+.||+-+..
T Consensus 17 ~~qLY~r~~g~~LqI~~-------dG~V~Gt~~--~~~~~s~l~i~sv~------~G-~V~I~gv~s~~YLcMn~~ 76 (146)
T 1rg8_A 17 PKLLYCSNGGHFLRILP-------DGTVDGTRD--RSDQHIQLQLSAES------VG-EVYIKSTETGQYLAMDTD 76 (146)
T ss_dssp CEEEEETTTTEEEEECT-------TSCEEEECC--TTCTTCCEEEEEEE------TT-EEEEEETTTCCEEEECTT
T ss_pred EEEEEEcCCCEEEEECC-------CCcEeeecc--CCCCceEEEEEeec------CC-eEEEEEcccCcEEEECCC
Confidence 35555554488888753 346777775 24677888887753 33 899999999999998743
No 23
>2p39_A Fibroblast growth factor 23; atypical beta-trefoil fold, signaling protein; HET: SCR; 1.50A {Homo sapiens}
Probab=79.69 E-value=15 Score=26.74 Aligned_cols=62 Identities=16% Similarity=0.078 Sum_probs=46.4
Q ss_pred eCCEEEEEecc--CCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecC
Q 030721 56 SGTIIRLQHMR--TRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHP 133 (172)
Q Consensus 56 ~g~~I~L~H~~--T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~ 133 (172)
.|..++|.-.. ||.+|..+. +-.|.+..+ .+....|.|+.+.. ..|+|+.+.|+.||+-+.
T Consensus 12 ~~~~~~LY~~~~rtg~~LqI~~-------dG~V~Gt~d---~~~~s~Lei~sv~~-------g~V~Ikgv~s~~YLcMn~ 74 (155)
T 2p39_A 12 WGGLIHLYTATARNSYHLQIHK-------NGHVDGAPH---QTIYSALMIRSEDA-------GFVVITGVMSRRYLCMDF 74 (155)
T ss_dssp STTCEEEECTTSSSCCEEEECT-------TSCEEEESS---CCTTTCEEEEECGG-------GEEEEEETTTTEEEEECT
T ss_pred CCCEEEEEEccCCCceEEEECC-------CCcEeCccC---CCCcEEEEEEeecC-------CEEEEEEeccCcEEEECC
Confidence 36678888754 899998863 346777765 46678888777532 489999999999999875
Q ss_pred C
Q 030721 134 K 134 (172)
Q Consensus 134 ~ 134 (172)
.
T Consensus 75 ~ 75 (155)
T 2p39_A 75 R 75 (155)
T ss_dssp T
T ss_pred C
Confidence 4
No 24
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene}
Probab=76.52 E-value=18 Score=25.64 Aligned_cols=91 Identities=12% Similarity=0.143 Sum_probs=55.1
Q ss_pred CEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCCCCC
Q 030721 58 TIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQ 137 (172)
Q Consensus 58 ~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~~lp 137 (172)
...+|++..+++.|-...... ...-.|..+... +..+-.|.++..++ ..++|++..++..|-..+.. .
T Consensus 74 g~y~i~~~~sg~cLdv~~~~~--~~G~~v~~~~c~--~~~~Q~W~~~~~g~-------g~~~i~~~~sg~cLdv~~~~-~ 141 (165)
T 3pg0_A 74 GYYKLVARHSGKALDVENAST--SDGANVIQYSYS--GGDNQQWRLVDLGD-------GYYKLVARHSGKALDVENAS-T 141 (165)
T ss_dssp TEEEEEETTTCCEEEEGGGCC--STTCBEEEECCC--CCGGGCEEEEECSS-------SCEEEEETTTCCEEEEGGGC-C
T ss_pred CEEEEEECCCCCEEEeCCCCC--CCCCEEEEEcCC--CCCccEEEEEECCC-------CEEEEEECCCCcEEEcCCCC-C
Confidence 478999999999997644321 122334444421 34678899887543 45899999999999876432 1
Q ss_pred CCCCCCeeEEEEcCCCCCCcEEEEE
Q 030721 138 RIAGGQQEVCGVREKRADNVWLAAE 162 (172)
Q Consensus 138 ~~~~~q~EV~c~~~~~~~~~W~ve~ 162 (172)
+.+..=.--.|.. ..+..|+++.
T Consensus 142 ~~G~~v~~~~c~g--~~nQ~W~~~~ 164 (165)
T 3pg0_A 142 SDGANVIQYSYSG--GDNQQWRLVD 164 (165)
T ss_dssp STTCBEEEECCCC--CGGGCEEEEE
T ss_pred CCCCEEEEeCCCC--CccceEEEEE
Confidence 1121111123442 3567898864
No 25
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene}
Probab=75.39 E-value=19 Score=25.46 Aligned_cols=92 Identities=12% Similarity=0.135 Sum_probs=54.3
Q ss_pred CCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCCCC
Q 030721 57 GTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKY 136 (172)
Q Consensus 57 g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~~l 136 (172)
+...+|++..+|+.|-...... ...-.|..+.-. +..+-.|.+...++ ..++|++..++.+|-..+...
T Consensus 26 ~g~y~i~n~~sg~cLdv~~~~~--~~g~~v~~~~c~--~~~~Q~W~~~~~~~-------g~y~i~~~~sg~cLdv~~~~~ 94 (165)
T 3pg0_A 26 DGYYKLVARHSGKALDVENAST--SDGANVIQYSYS--GGDNQQWRLVDLGD-------GYYKLVARHSGKALDVENAST 94 (165)
T ss_dssp CCEEEEEETTTCCEEEEGGGCC--STTCBEEEECCC--CCGGGCEEEEEEET-------TEEEEEETTTCCEEEEGGGCC
T ss_pred CCEEEEEECCCCCEEEeCCCCC--CCCCEEEEECCC--CCccceEEEEECCC-------CEEEEEECCCCCEEEeCCCCC
Confidence 5678999999999997643221 112344444421 34578899876533 478999999999998654321
Q ss_pred CCCCCCCeeEEEEcCCCCCCcEEEEE
Q 030721 137 QRIAGGQQEVCGVREKRADNVWLAAE 162 (172)
Q Consensus 137 p~~~~~q~EV~c~~~~~~~~~W~ve~ 162 (172)
+.+..=.--.|.. ..+..|+++.
T Consensus 95 -~~G~~v~~~~c~~--~~~Q~W~~~~ 117 (165)
T 3pg0_A 95 -SDGANVIQYSYSG--GDNQQWRLVD 117 (165)
T ss_dssp -STTCBEEEECCCC--CGGGCEEEEE
T ss_pred -CCCCEEEEEcCCC--CCccEEEEEE
Confidence 1111101113433 2456888875
No 26
>1ijt_A FGF4, fibroblast growth factor 4; B-trefoil fold, hormone/growth factor complex; 1.80A {Homo sapiens} SCOP: b.42.1.1
Probab=71.07 E-value=24 Score=24.73 Aligned_cols=50 Identities=8% Similarity=-0.011 Sum_probs=35.7
Q ss_pred CCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCC
Q 030721 68 RKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 134 (172)
Q Consensus 68 ~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~ 134 (172)
|.+|..++ +.-|.+..+ .+....|.|+.+. .+ .|+|+.+.|+.||+-+..
T Consensus 15 g~~LqI~~-------dG~V~Gt~~---~~~~s~l~~~sv~------~g-~V~I~gv~s~~YLcmn~~ 64 (128)
T 1ijt_A 15 GFHLQALP-------DGRIGGAHA---DTRDSLLELSPVE------RG-VVSIFGVASRFFVAMSSK 64 (128)
T ss_dssp CEEEEECT-------TSCEEEESS---CCGGGCEEEEEEE------TT-EEEEEETTTTEEEEECTT
T ss_pred CeEEEECC-------CCcEecccC---CCccceEEEEecc------CC-EEEEEEcccCcEEEEcCC
Confidence 67887754 346777764 2236778877653 33 899999999999998743
No 27
>1nun_A Fibroblast growth factor-10; beta-trefoil fold, immunoglobulin-like domain, hormone/growth factor/membrane protein complex; HET: 15P; 2.90A {Homo sapiens} SCOP: b.42.1.1
Probab=70.96 E-value=26 Score=25.11 Aligned_cols=52 Identities=15% Similarity=0.138 Sum_probs=38.3
Q ss_pred CCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCC
Q 030721 67 TRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 134 (172)
Q Consensus 67 T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~ 134 (172)
||.+|..++ +--|.+..+ ..+....|.|+.+ ..+ .|+|+.+.|+.||+-+..
T Consensus 23 ~g~~LqI~~-------dG~V~Gt~~--~~~~~s~l~~~sv------~~g-~V~I~gv~s~~YLcmn~~ 74 (145)
T 1nun_A 23 TKYFLKIEK-------NGKVSGTKK--ENCPYSILEITSV------EIG-VVAVKAINSNYYLAMNKK 74 (145)
T ss_dssp TSCEEEECT-------TSCEEEECC--SCCTTSCEEEEEE------ETT-EEEEEETTTTEEEEECTT
T ss_pred CCeEEEECC-------CCcEeeecC--CCCCceeEEEEEe------cCC-eEEEEEcccCcEEEEcCC
Confidence 477888763 346777765 2467788888775 334 899999999999998644
No 28
>3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A
Probab=65.78 E-value=32 Score=24.12 Aligned_cols=82 Identities=21% Similarity=0.338 Sum_probs=50.7
Q ss_pred cccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEE
Q 030721 26 TGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMI 105 (172)
Q Consensus 26 t~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~ 105 (172)
.+-..+.+..+.|.|. +|..| +|+|+-+.|+.||-..+ .-.|.+... ..++...+.+..
T Consensus 28 ~Gt~~~~~~~s~l~~~-----------~v~~G-~V~I~g~~sg~yL~m~~-------~G~v~Gs~~--~s~ec~flE~~~ 86 (132)
T 3q7x_A 28 DGTRDRSDPGIQFQIS-----------PEGNG-EVLLRSTETGQFLRINP-------DGTVDGTRD--RSDPGIQFQISP 86 (132)
T ss_dssp EEECCTTCGGGCEEEE-----------EEETT-EEEEEETTTCCEEEECT-------TSBEEEECC---CCGGGCEEEEE
T ss_pred EeecCCCCCCcEEEEE-----------ecccC-EEEEEEEcccEEEEECC-------CCCEeeccC--CCCCceeEEEEe
Confidence 4444334556666664 45556 89999999999998753 223544432 122223344433
Q ss_pred ccCCceeeeCCeEEEEEccCCeeeeecCCC
Q 030721 106 EGSGKTWRQDQRIRLQHVDTGGYLHSHPKK 135 (172)
Q Consensus 106 ~~~~~~~~~~~~~rL~H~~t~~~L~s~~~~ 135 (172)
.+ ...+.++.+.++.||+-+..-
T Consensus 87 ~~-------~g~v~ikg~~sg~YLamnk~G 109 (132)
T 3q7x_A 87 EG-------NGEVLLRSTETGQFLRINPDG 109 (132)
T ss_dssp EE-------TTEEEEEETTTCCEEEECTTS
T ss_pred ec-------CcEEEEEeccCCeEEEECCCC
Confidence 32 246889999999999987543
No 29
>2p23_A FGF-19, fibroblast growth factor 19; atypical beta-trefoil fold, signaling protein; 1.80A {Homo sapiens} SCOP: b.42.1.1
Probab=62.45 E-value=22 Score=26.94 Aligned_cols=61 Identities=20% Similarity=0.339 Sum_probs=42.4
Q ss_pred CCEEEEEeccC--CC-----ceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeee
Q 030721 57 GTIIRLQHMRT--RK-----WLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYL 129 (172)
Q Consensus 57 g~~I~L~H~~T--~~-----~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L 129 (172)
|..+|+++.-+ +. +|..+. +-.|.+..+ .+....|.|+.+. . ..|+|+.+.|+.||
T Consensus 17 g~~~R~~qLY~rtg~g~~~~~LqI~~-------dG~V~Gt~d---~s~~siLei~sv~------~-G~V~IkGv~S~~YL 79 (194)
T 2p23_A 17 GDPIRLRHLYTSGPHGLSSCFLRIRA-------DGVVDCARG---QSAHSLLEIKAVA------L-RTVAIKGVHSVRYL 79 (194)
T ss_dssp -CCCEEEEEEEECTTSCCEEEEEECT-------TSBEEEESS---CCTTTCEEEEEEE------T-TEEEEEETTTCCEE
T ss_pred CCccEEEEEEEccCCCCcceEEEECC-------CCcEeCccC---CCcccEEEEEecc------C-CEEEEEEcccCcEE
Confidence 56677777654 42 787753 346777754 4667788877653 2 48999999999999
Q ss_pred eecCC
Q 030721 130 HSHPK 134 (172)
Q Consensus 130 ~s~~~ 134 (172)
+-+..
T Consensus 80 cMn~~ 84 (194)
T 2p23_A 80 CMGAD 84 (194)
T ss_dssp EECGG
T ss_pred EECCC
Confidence 98643
No 30
>1rg8_A Heparin-binding growth factor 1; beta-trefoil, hormone/growth factor complex; 1.10A {Homo sapiens} SCOP: b.42.1.1 PDB: 1jqz_A 3fjb_A 1jt3_A 1jt4_A 1jtc_A 3baq_A 3bah_A 3fja_A 3fj9_A 3fjk_A 3hom_A 3fjc_A 3ba5_A 3fjh_A 1jt5_A 1k5v_A 3fjj_A 1jy0_A 3bao_A 3fjf_A ...
Probab=58.05 E-value=13 Score=26.76 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=25.9
Q ss_pred ecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecC
Q 030721 25 VTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHL 75 (172)
Q Consensus 25 Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~ 75 (172)
|.+-....+..+.|.|+ .|..| .|+|+.+.|+.||=...
T Consensus 37 V~Gt~~~~~~~s~l~i~-----------sv~~G-~V~I~gv~s~~YLcMn~ 75 (146)
T 1rg8_A 37 VDGTRDRSDQHIQLQLS-----------AESVG-EVYIKSTETGQYLAMDT 75 (146)
T ss_dssp EEEECCTTCTTCCEEEE-----------EEETT-EEEEEETTTCCEEEECT
T ss_pred EeeeccCCCCceEEEEE-----------eecCC-eEEEEEcccCcEEEECC
Confidence 34444433555566654 35556 99999999999997643
No 31
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3
Probab=58.00 E-value=75 Score=26.52 Aligned_cols=86 Identities=14% Similarity=0.115 Sum_probs=53.1
Q ss_pred eCCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccC-CeeeeecCC
Q 030721 56 SGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDT-GGYLHSHPK 134 (172)
Q Consensus 56 ~g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t-~~~L~s~~~ 134 (172)
.+..+||++..||.||..-.. ++-.|.+.+.. ......|.++.. +.-+||++.-+ +.||..-+
T Consensus 332 ~~g~~~ikn~~tg~y~~~~~~----~~~~~~~~~~~---~w~~~~w~~~~~--------~G~~~i~~~~~~~~~l~~e~- 395 (420)
T 1ups_A 332 RDGYTLLKNNETGEYLNIENQ----TGYIEHGKVPK---TWWSAQWSEVPV--------DGYTRFVNRWKPNMSIHTES- 395 (420)
T ss_dssp ETTEEEEEETTTCCEEECTTC----CSBCEEECCCT---TCGGGCEEEEEE--------TTEEEEEESSSTTCEEECTT-
T ss_pred cCCcEEEeeccccceEccccC----CCccccccCCC---CcccceEEEecC--------CCeEEEEEeccCCceEEEec-
Confidence 356789999999999988542 22345543221 225567887642 23788888877 68887543
Q ss_pred CCCCCCCCCeeEEEEcCCCCCCcEEEEE
Q 030721 135 KYQRIAGGQQEVCGVREKRADNVWLAAE 162 (172)
Q Consensus 135 ~lp~~~~~q~EV~c~~~~~~~~~W~ve~ 162 (172)
..++.|-.-.+....+..|.++.
T Consensus 396 -----~~g~~~~g~v~~~~~~~~w~~~~ 418 (420)
T 1ups_A 396 -----YEGVLQYGNVPNTYWTSQWQLIP 418 (420)
T ss_dssp -----CCSBCEEECCCTTCGGGCEEEEE
T ss_pred -----cCCceeecccCCccCCceEEEEe
Confidence 22444444444334577888764
No 32
>3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A
Probab=57.91 E-value=45 Score=23.29 Aligned_cols=59 Identities=22% Similarity=0.366 Sum_probs=43.9
Q ss_pred EEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecC
Q 030721 59 IIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHP 133 (172)
Q Consensus 59 ~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~ 133 (172)
.|-|+-..+|.+|..++ +-.|.+..+ ..+....|.|..+. . ..|+|+-+.|+.||....
T Consensus 7 ~~~~~~~~~g~~L~I~~-------dG~V~Gt~~--~~~~~s~l~~~~v~------~-G~V~I~g~~sg~yL~m~~ 65 (132)
T 3q7x_A 7 EVLLRSTETGQFLRINP-------DGTVDGTRD--RSDPGIQFQISPEG------N-GEVLLRSTETGQFLRINP 65 (132)
T ss_dssp CEEEEETTTCCEEEECT-------TSBEEEECC--TTCGGGCEEEEEEE------T-TEEEEEETTTCCEEEECT
T ss_pred hheeeeccCcEEEEECC-------CCcEEeecC--CCCCCcEEEEEecc------c-CEEEEEEEcccEEEEECC
Confidence 46788888999998753 346777764 24667788876653 2 379999999999999864
No 33
>1pwa_A FGF-19, fibroblast growth factor-19; beta trefoil, disulphide bonds, hormone-growth factor comple; 1.30A {Homo sapiens} SCOP: b.42.1.1
Probab=57.70 E-value=25 Score=25.78 Aligned_cols=61 Identities=20% Similarity=0.339 Sum_probs=40.6
Q ss_pred CCEEEEEeccC--CC-----ceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeee
Q 030721 57 GTIIRLQHMRT--RK-----WLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYL 129 (172)
Q Consensus 57 g~~I~L~H~~T--~~-----~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L 129 (172)
|..+|+++.=+ +. +|..+. +--|.+..+ .+....|.|+.+. . ..|+|+.+.|+.||
T Consensus 5 g~~~R~~~LY~~~~~g~~~~~LqI~~-------dG~V~Gt~d---~~~~siLei~sv~------~-g~V~I~gv~s~~YL 67 (162)
T 1pwa_A 5 GDPIRLRHLYTSGPHGLSSCFLRIRA-------DGVVDCARG---QSAHSLLEIKAVA------L-RTVAIKGVHSVRYL 67 (162)
T ss_dssp --CEEEEEEEECCTTSCCCEEEEECT-------TSBEEEESS---CCGGGCEEEEEEE------T-TEEEEEETTTCCEE
T ss_pred CCceEEEEEEEccCCCCceeEEEECC-------CCcEeCCcC---CCCccEEEEEeec------C-CEEEEEEcccCcEE
Confidence 44566666554 42 777753 346777743 4566778776653 2 68999999999999
Q ss_pred eecCC
Q 030721 130 HSHPK 134 (172)
Q Consensus 130 ~s~~~ 134 (172)
+-+..
T Consensus 68 cMn~~ 72 (162)
T 1pwa_A 68 CMGAD 72 (162)
T ss_dssp EECGG
T ss_pred EEcCC
Confidence 97643
No 34
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=57.40 E-value=40 Score=24.24 Aligned_cols=40 Identities=5% Similarity=0.016 Sum_probs=27.6
Q ss_pred CCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEc
Q 030721 57 GTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIE 106 (172)
Q Consensus 57 g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~ 106 (172)
+..+.|++ .+|+||.+.+- -.++|... ..+.+..|.|++.
T Consensus 111 ~G~~aLra-~nG~yl~~~~~-------g~l~a~a~--~~~~~E~f~v~l~ 150 (155)
T 2yug_A 111 DGKMALLA-SNSCFIRCNEA-------GDIEAKNK--TAGEEEMIKIRSC 150 (155)
T ss_dssp TTCCEEEE-TTSCBEEECSS-------SCEEECCS--CCCTTTCCEEEEC
T ss_pred CCEEEEEe-CCCCEEEEcCC-------CcEEEecC--CCCCCcEEEEEEe
Confidence 44688999 78999987432 24777554 2344678998875
No 35
>1nun_A Fibroblast growth factor-10; beta-trefoil fold, immunoglobulin-like domain, hormone/growth factor/membrane protein complex; HET: 15P; 2.90A {Homo sapiens} SCOP: b.42.1.1
Probab=56.50 E-value=12 Score=26.95 Aligned_cols=38 Identities=13% Similarity=0.307 Sum_probs=27.1
Q ss_pred ecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeec
Q 030721 25 VTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSH 74 (172)
Q Consensus 25 Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh 74 (172)
|.+-....+..+.|.|. .|..| .|+|+.+.|+.||=..
T Consensus 35 V~Gt~~~~~~~s~l~~~-----------sv~~g-~V~I~gv~s~~YLcmn 72 (145)
T 1nun_A 35 VSGTKKENCPYSILEIT-----------SVEIG-VVAVKAINSNYYLAMN 72 (145)
T ss_dssp EEEECCSCCTTSCEEEE-----------EEETT-EEEEEETTTTEEEEEC
T ss_pred EeeecCCCCCceeEEEE-----------EecCC-eEEEEEcccCcEEEEc
Confidence 44555444566777764 35557 9999999999999664
No 36
>1qql_A Fibroblast growth factor 7/1 chimera; beta-trefoil, hormone/growth factor complex; 2.30A {Rattus norvegicus} SCOP: b.42.1.1 PDB: 1qqk_A
Probab=55.42 E-value=14 Score=26.38 Aligned_cols=39 Identities=15% Similarity=0.368 Sum_probs=28.0
Q ss_pred ecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecC
Q 030721 25 VTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHL 75 (172)
Q Consensus 25 Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~ 75 (172)
|.+-....+....|.|+ .|..| .|+|+.+.|+.||=...
T Consensus 31 V~Gt~~~~~~~s~l~~~-----------sv~~g-~V~I~gv~s~~YLcmn~ 69 (140)
T 1qql_A 31 VKGTQEMRNSYNIMEIR-----------TVAVG-IVAIKGVESEYYLAMNK 69 (140)
T ss_dssp EEEESCTTCSTTCEEEE-----------EEETT-EEEEEETTTCCCCEECT
T ss_pred EEeecCCCCCceEEEEE-----------eecCC-EEEEEEcccCcEEEEcC
Confidence 45555444567777775 34557 99999999999997754
No 37
>1f53_A Yeast killer toxin-like protein; killer toxin-like protein,SKLP, crystallin family; NMR {Streptomyces SP} SCOP: b.11.1.4
Probab=54.58 E-value=15 Score=23.68 Aligned_cols=36 Identities=22% Similarity=0.542 Sum_probs=27.6
Q ss_pred CceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEcc
Q 030721 69 KWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEG 107 (172)
Q Consensus 69 ~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~ 107 (172)
.||+.-.+ +.+.++|-||++.+..+-.++|+=.+..
T Consensus 11 ~~LkiwsH---~~gr~s~~CyAN~G~~~fg~wWVdkIsT 46 (84)
T 1f53_A 11 NFLKIWSH---SGGQQSVDCYANRGRIDFGGWWVDKIST 46 (84)
T ss_dssp SSEEEEEE---CSSCEEEEEECSSBCCBCCSCCEEEEEC
T ss_pred CeEEEEEe---cCCCcccceeeccCcccccCEEEEEEec
Confidence 37775444 5578999999998888888999877654
No 38
>3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A*
Probab=53.01 E-value=73 Score=27.19 Aligned_cols=93 Identities=13% Similarity=0.144 Sum_probs=56.4
Q ss_pred eCCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCCC
Q 030721 56 SGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKK 135 (172)
Q Consensus 56 ~g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~~ 135 (172)
.+...+|++..+|+.|-.-.... ...-.|..+.-. +..+..|.+....+ ..++|++..+|+.|-..+..
T Consensus 359 ~~~~y~i~n~~sg~cLdv~~~~~--~~G~~v~~~~c~--g~~~Q~W~~~~~g~-------g~y~i~n~~sg~cLdv~~~~ 427 (526)
T 3vsf_A 359 DTTRYKLVNKNSGKVLDVLDGSV--DNAAQIVQWTDN--GSLSQQWYLVDVGG-------GYKKIVNVKSGRALDVKDES 427 (526)
T ss_dssp CCCCEEEEETTTCCEEEEGGGCC--STTEEEEEECCC--CCGGGCEEEEECST-------TEEEEEESSSCCEEEEGGGC
T ss_pred CCccEEEEECCCCceEEecCCCC--CCCcEEEEccCC--CCcceEEEEEECCC-------CEEEEEECCCCCEEEeCCCC
Confidence 46779999999999997644211 123344444421 44578899877543 45899999999999865432
Q ss_pred CCCCCCCCeeEEEEcCCCCCCcEEEEE
Q 030721 136 YQRIAGGQQEVCGVREKRADNVWLAAE 162 (172)
Q Consensus 136 lp~~~~~q~EV~c~~~~~~~~~W~ve~ 162 (172)
. +.+..=+.-.|.. ..+..|+++.
T Consensus 428 ~-~~G~~v~~~~c~g--~~nQ~W~~~~ 451 (526)
T 3vsf_A 428 K-EDGGVLIQYTSNG--GYNQHWKFTD 451 (526)
T ss_dssp C-STTEEEEEECCCC--CGGGCEEEEE
T ss_pred C-CCCCEEEEecCCC--CcccEEEEEE
Confidence 0 1111111123543 2566888865
No 39
>3p6i_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; HET: SO4; 1.32A {Synthetic} PDB: 3ogf_A
Probab=52.54 E-value=61 Score=23.16 Aligned_cols=64 Identities=22% Similarity=0.306 Sum_probs=39.9
Q ss_pred ceeeeCCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeee
Q 030721 52 DTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHS 131 (172)
Q Consensus 52 ~~V~~g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s 131 (172)
..|..| +|+|+-+.|+.||-...- -.|.+... ..++.....+.... .-.|.|+-+.++.||+-
T Consensus 78 ~sv~~G-vV~I~Gv~tg~yL~Mn~d-------G~l~Gs~~--~s~ec~flEi~~v~-------~G~V~Ikgv~Sg~YLaM 140 (142)
T 3p6i_A 78 SPEGNG-EVLLKSTETGQYLRINPD-------GTVDGTRD--RSDTHIQFQISPEG-------NGEVLLKSTETGQYLRI 140 (142)
T ss_dssp EEEETT-EEEEEETTTCCEEEECTT-------SBEEEECC--TTCTTCCEEEEECS-------SSCEEEEETTTTEEEEE
T ss_pred EeccCC-EEEEEEecCceEEeECCC-------CCCccccC--CCCCeEEEEEEEEe-------CCEEEEEEEecceEEEE
Confidence 455667 999999999999977432 23444432 12221222222221 24689999999999986
Q ss_pred c
Q 030721 132 H 132 (172)
Q Consensus 132 ~ 132 (172)
+
T Consensus 141 n 141 (142)
T 3p6i_A 141 N 141 (142)
T ss_dssp C
T ss_pred C
Confidence 5
No 40
>1ihk_A GLIA-activating factor; B-trefoil fold, hormone/growth factor complex; 2.20A {Homo sapiens} SCOP: b.42.1.1 PDB: 1g82_A*
Probab=52.43 E-value=68 Score=23.68 Aligned_cols=58 Identities=21% Similarity=0.121 Sum_probs=39.2
Q ss_pred EEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCC
Q 030721 60 IRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 134 (172)
Q Consensus 60 I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~ 134 (172)
++|.- .||.+|..+. +--|.+..+. .+....|.|+.+. . ..|+|+.+.|+.||+-+..
T Consensus 30 ~qLY~-r~g~~LqI~~-------dG~V~Gt~~~--~s~~silei~sv~------~-g~V~I~gv~s~~YLcMn~~ 87 (174)
T 1ihk_A 30 RQLYC-RTGFHLEIFP-------NGTIQGTRKD--HSRFGILEFISIA------V-GLVSIRGVDSGLYLGMNEK 87 (174)
T ss_dssp EEEEE-TTSCEEEECT-------TSCEEEESST--TCGGGCEEEEEEE------T-TEEEEEETTTCCEEEECTT
T ss_pred EEEEe-cCCcEEEECC-------CCcEEeecCC--CCCcceEEEEecc------C-ceEEEEEcccCcEEEEcCC
Confidence 33443 3477787754 2357777642 4566778876653 2 4899999999999998643
No 41
>3hbw_A Fibroblast growth factor 13; beta-trefoil fold, alternative splicing, polymorphism, hormone; 1.90A {Homo sapiens} PDB: 4dck_C
Probab=48.38 E-value=66 Score=24.27 Aligned_cols=65 Identities=18% Similarity=0.182 Sum_probs=45.3
Q ss_pred eeeeCCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeec
Q 030721 53 TIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSH 132 (172)
Q Consensus 53 ~V~~g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~ 132 (172)
+.--|.+.+|.-- +|.||..+. +-.|.+..+ ..+....|.|..++. ..|+|+.+.|+.||+-+
T Consensus 12 p~l~g~~rqLYcr-~G~hLqI~~-------dG~V~GT~~--~~s~~slLei~sv~~-------GvV~IkGv~S~~YLcMn 74 (193)
T 3hbw_A 12 PQLKGIVTKLYSR-QGYHLQLQA-------DGTIDGTKD--EDSTYTLFNLIPVGL-------RVVAIQGVQTKLYLAMN 74 (193)
T ss_dssp CCEEEEEEEEEET-TSCEEEECT-------TSCEEEESC--TTCGGGCEEEEEEET-------TEEEEEETTTCCEEEEC
T ss_pred ccccceeeEEEEc-CCeEEEEcC-------CCcEEcccC--CCCCceEEEEEeccC-------CEEEEEEeeceeEEEEc
Confidence 3444666677665 588998854 346777764 245667788766532 57999999999999987
Q ss_pred CC
Q 030721 133 PK 134 (172)
Q Consensus 133 ~~ 134 (172)
..
T Consensus 75 ~~ 76 (193)
T 3hbw_A 75 SE 76 (193)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 42
>3f1r_A FGF-20, fibroblast growth factor 20; beta-trefoil fold, polymorphism, secreted, hormone; 2.50A {Homo sapiens}
Probab=47.24 E-value=89 Score=23.89 Aligned_cols=52 Identities=15% Similarity=0.081 Sum_probs=37.1
Q ss_pred CCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCC
Q 030721 67 TRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 134 (172)
Q Consensus 67 T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~ 134 (172)
||.+|..+. +-.|.+..+ ..+....|.|+.+. . ..|+|+.+.|+.||+-+..
T Consensus 73 tg~hLqI~~-------dG~V~GT~~--~~s~yslLei~sv~------~-G~V~IkGv~S~~YLcMn~~ 124 (211)
T 3f1r_A 73 TGFHLQILP-------DGSVQGTRQ--DHSLFGILEFISVA------V-GLVSIRGVDSGLYLGMNDK 124 (211)
T ss_dssp TTEEEEECT-------TSCEEEESC--TTCSSSEEEEEEEE------T-TEEEEEETTTCCEEEECTT
T ss_pred CCeEEEECC-------CCcEEeccC--CCCCcceeeEEecc------C-CEEEEEEeecceEEEECCC
Confidence 577787753 345777764 24567778877653 2 4899999999999998754
No 43
>3zx7_A Lysenin; toxin, pore forming toxin; HET: PC; 2.84A {Eisenia fetida} PDB: 3zxd_A* 3zxg_A*
Probab=46.17 E-value=40 Score=25.90 Aligned_cols=49 Identities=14% Similarity=0.301 Sum_probs=30.9
Q ss_pred CCCceeeeCCEEEEEeccC-CCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEcc
Q 030721 49 KQGDTIKSGTIIRLQHMRT-RKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEG 107 (172)
Q Consensus 49 ~~~~~V~~g~~I~L~H~~T-~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~ 107 (172)
....+++.||+|++++.-- ..-|--.+- ..--|-|.. ...|.|++|+++
T Consensus 247 ~kalplrhgdvvtf~n~~ft~sglcyddg-----patnvycld-----kredkwilevvg 296 (309)
T 3zx7_A 247 NKSLPLRHGDVVTFMNKYFTRSGLCYDDG-----PATNVYCLD-----KREDKWILEVVG 296 (309)
T ss_dssp SSCSSCBTTCEECEEESSSTTEEEEECCC-----SSCCEEEEE-----TCCCCEEEEECC
T ss_pred cccCccccCcEEEEehhhcccCceeccCC-----CcceeEeec-----ccCcceEEEEEe
Confidence 4678999999999998653 222211111 123466654 356889999874
No 44
>3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A*
Probab=45.82 E-value=63 Score=22.99 Aligned_cols=91 Identities=11% Similarity=0.168 Sum_probs=55.5
Q ss_pred eeeCCEEEEEecc-CCCceeecCCCCCCCCCeEEEEecCCCCCCCCCc----EEEEEccCCceeeeCCeEEEEEccCCee
Q 030721 54 IKSGTIIRLQHMR-TRKWLHSHLHASPISGNLEISCFGGEEESDTGDY----WRVMIEGSGKTWRQDQRIRLQHVDTGGY 128 (172)
Q Consensus 54 V~~g~~I~L~H~~-T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~----W~Ie~~~~~~~~~~~~~~rL~H~~t~~~ 128 (172)
|..| .-+|+++. +|+.|-...... ...-.|..+... +..|-. |+|+...+.. ...++|+++ |+|
T Consensus 2 i~~G-~Y~I~n~~~sgk~lDv~~~st--a~Gt~V~~w~~~--g~~nQ~~~~~W~~~~~~~~~----~g~y~i~n~--G~~ 70 (148)
T 3nbc_A 2 ITPG-TYNITNVAYTNRLIDLTGSNP--AENTLIIGHHLN--KTPSGYGNQQWTLVQLPHTT----IYTMQAVNP--QSY 70 (148)
T ss_dssp CCSE-EEEEEESSCTTCEEEEGGGCC--STTEEEEEECCC--STTTCCGGGCEEEEECTTSS----EEEEEESSS--CCE
T ss_pred ccCC-EEEEEEecCCCCeEECCCCcC--CCCcEEEEeCCC--CChhheeecEEEEEECCCcc----cceEEEEEC--CcE
Confidence 3445 38999999 999997754321 135677777753 567788 9998764411 135788887 888
Q ss_pred eeecCCCCCCCCCCCeeEEEEcCCCCCCcEEEEE
Q 030721 129 LHSHPKKYQRIAGGQQEVCGVREKRADNVWLAAE 162 (172)
Q Consensus 129 L~s~~~~lp~~~~~q~EV~c~~~~~~~~~W~ve~ 162 (172)
|-..+.. ...+. .|.... .+..|+|+.
T Consensus 71 Ldv~~~~---ta~Gt-~v~~~~---~~q~W~i~~ 97 (148)
T 3nbc_A 71 VRVRDDN---LVDGA-ALVGSQ---QPTPVSIES 97 (148)
T ss_dssp EEEGGGC---CSTTC-BEEEES---SCCCEEEEE
T ss_pred EEccCCC---CCCCc-EEecCC---CCcEEEEEE
Confidence 8654321 11111 233332 346888876
No 45
>1bfg_A Basic fibroblast growth factor; 1.60A {Homo sapiens} SCOP: b.42.1.1 PDB: 1iil_A 1ii4_A 1bas_A 1bla_A 1bld_A 1bfb_A* 1bfc_A* 4fgf_A 1fga_A 2fgf_A 1ev2_A 1cvs_A 1fq9_A* 1bff_A 2bfh_A
Probab=41.31 E-value=16 Score=26.27 Aligned_cols=39 Identities=13% Similarity=0.316 Sum_probs=25.7
Q ss_pred ecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecC
Q 030721 25 VTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHL 75 (172)
Q Consensus 25 Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~ 75 (172)
|.+-....|....|.|+ .|..| .|+|+.+.|+.||=...
T Consensus 40 V~Gt~~~~~~~s~l~i~-----------sv~~G-~V~I~gv~s~~YLcMn~ 78 (146)
T 1bfg_A 40 VDGVREKSDPHIKLQLQ-----------AEERG-VVSIKGVSANRYLAMKE 78 (146)
T ss_dssp EEEECCTTCGGGCEEEE-----------ECSTT-EEEEEETTTTEEEEECT
T ss_pred EEeecCCCCCceEEEEE-----------eccCC-EEEEEEcccCcEEEEcC
Confidence 34444333455666665 23346 99999999999997643
No 46
>2fdb_M FGF8B, fibroblast growth factor 8 isoform B; beta-trefoil fold, immunoglobulin fold, hormone/growth factor/transferase complex; 2.28A {Homo sapiens} SCOP: b.42.1.1
Probab=39.77 E-value=28 Score=25.53 Aligned_cols=22 Identities=18% Similarity=0.243 Sum_probs=18.1
Q ss_pred eeeeCCEEEEEeccCCCceeec
Q 030721 53 TIKSGTIIRLQHMRTRKWLHSH 74 (172)
Q Consensus 53 ~V~~g~~I~L~H~~T~~~Lhsh 74 (172)
.+..|..|+|+.+.|+.||=..
T Consensus 68 s~~~g~~V~I~gv~s~~YLcMn 89 (164)
T 2fdb_M 68 TDTFGSRVRVRGAETGLYICMN 89 (164)
T ss_dssp EEETTTEEEEEETTTCCEEEEC
T ss_pred EeccceEEEEEEeccCcEEEEc
Confidence 3456779999999999999664
No 47
>3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A*
Probab=38.70 E-value=93 Score=26.52 Aligned_cols=93 Identities=8% Similarity=0.092 Sum_probs=55.6
Q ss_pred CEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCCCCC
Q 030721 58 TIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQ 137 (172)
Q Consensus 58 ~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~~lp 137 (172)
...+|++..+|+.|-...... ...-.|..+.-. +..+..|.++...+ ..++|++..+|..|-..+..-
T Consensus 408 g~y~i~n~~sg~cLdv~~~~~--~~G~~v~~~~c~--g~~nQ~W~~~~~g~-------g~y~i~~~~sg~cLdv~~~s~- 475 (526)
T 3vsf_A 408 GYKKIVNVKSGRALDVKDESK--EDGGVLIQYTSN--GGYNQHWKFTDIGD-------GYYKISSRHCGKLIDVRKWST- 475 (526)
T ss_dssp TEEEEEESSSCCEEEEGGGCC--STTEEEEEECCC--CCGGGCEEEEEEET-------TEEEEEESSSCCEEEEGGGCC-
T ss_pred CEEEEEECCCCCEEEeCCCCC--CCCCEEEEecCC--CCcccEEEEEECCC-------CeEEEEECCCCCEEEeCCCCC-
Confidence 468999999999997643321 123344444421 44778899877543 458999999999998754220
Q ss_pred CCCCCCeeEEEEcCCCCCCcEEEEEee
Q 030721 138 RIAGGQQEVCGVREKRADNVWLAAEGV 164 (172)
Q Consensus 138 ~~~~~q~EV~c~~~~~~~~~W~ve~~~ 164 (172)
+.+..=+.-.|.. ..+..|+++...
T Consensus 476 ~~G~~v~~~~c~g--~~nQ~W~~~~v~ 500 (526)
T 3vsf_A 476 EDGGIIQQWSDAG--GTNQHWKLVLVS 500 (526)
T ss_dssp STTEEEEEECCCC--CGGGCEEEEEC-
T ss_pred CCCCEEEEEcCCC--CccCeEEEEecC
Confidence 1111111123443 356789987654
No 48
>1ihk_A GLIA-activating factor; B-trefoil fold, hormone/growth factor complex; 2.20A {Homo sapiens} SCOP: b.42.1.1 PDB: 1g82_A*
Probab=34.29 E-value=36 Score=25.18 Aligned_cols=39 Identities=10% Similarity=0.159 Sum_probs=25.7
Q ss_pred ecccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecC
Q 030721 25 VTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHL 75 (172)
Q Consensus 25 Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~ 75 (172)
|.+-..+.+....|.|. .|..| .|+|+.+.|+.||=...
T Consensus 48 V~Gt~~~~s~~silei~-----------sv~~g-~V~I~gv~s~~YLcMn~ 86 (174)
T 1ihk_A 48 IQGTRKDHSRFGILEFI-----------SIAVG-LVSIRGVDSGLYLGMNE 86 (174)
T ss_dssp EEEESSTTCGGGCEEEE-----------EEETT-EEEEEETTTCCEEEECT
T ss_pred EEeecCCCCCcceEEEE-----------eccCc-eEEEEEcccCcEEEEcC
Confidence 34444334555666654 34455 99999999999997643
No 49
>2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A
Probab=30.39 E-value=2.2e+02 Score=26.22 Aligned_cols=85 Identities=19% Similarity=0.316 Sum_probs=51.9
Q ss_pred eecccccccCCCCceEEeecCCCCCCCCceeeeC--CEEEEEeccCCCceeecCCCCCCC-CCeEEEEecCCCCCCCCCc
Q 030721 24 SVTGFPDVDDANSYWIVKPILGASAKQGDTIKSG--TIIRLQHMRTRKWLHSHLHASPIS-GNLEISCFGGEEESDTGDY 100 (172)
Q Consensus 24 ~Vt~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g--~~I~L~H~~T~~~Lhsh~~~~p~S-~~qeVs~~~~~~~~d~~~~ 100 (172)
.|.++......|-.|.|. ..+ ...+|+++.++++|-+-+ ++.+ +..-|..+.+ .+.....
T Consensus 295 ~VqLw~~~~~~nQ~W~f~-------------yd~~~g~Y~IrN~~sgk~L~~~~--~~s~~G~~~V~~~~~--~gs~~Q~ 357 (841)
T 2vse_A 295 PVESYKNFGFENQKWNIK-------------YDSKKNAYKIYNRETPTLLLSWN--SNSSNGEQVIRGYTE--SGSNNQY 357 (841)
T ss_dssp EEEEEECCCCGGGCEEEE-------------EETTTTEEEEEESSSTTCEEECC--TTCGGGCCBCEEECC--CSCGGGC
T ss_pred eEEEEcCCCCccceEEEE-------------ECCCCCEEEEEEcCCCCEEEEcC--CCCCCCceEEEEecC--CCCcccE
Confidence 344555434555556654 233 367999999999998754 3322 2233444443 2455678
Q ss_pred EEEEEccCCceeeeCCeEEEEEc-cCCeeeeec
Q 030721 101 WRVMIEGSGKTWRQDQRIRLQHV-DTGGYLHSH 132 (172)
Q Consensus 101 W~Ie~~~~~~~~~~~~~~rL~H~-~t~~~L~s~ 132 (172)
|+|+..++| -++|++. ..+..|-..
T Consensus 358 W~i~~~gdG-------~y~I~N~~~sglvLDv~ 383 (841)
T 2vse_A 358 WTIEKNVNG-------FYKFRNLSDPSKILDLK 383 (841)
T ss_dssp EEEEECTTS-------CEEEEESSCTTCEEEEG
T ss_pred EEEEECCCc-------eEEEEecCCCceEEEec
Confidence 999876432 4788887 667777754
No 50
>3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A*
Probab=27.56 E-value=2.3e+02 Score=22.48 Aligned_cols=83 Identities=10% Similarity=0.270 Sum_probs=51.9
Q ss_pred CCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCC-CCCCCCCcEEEEEccCCce
Q 030721 33 DANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGE-EESDTGDYWRVMIEGSGKT 111 (172)
Q Consensus 33 d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~-~~~d~~~~W~Ie~~~~~~~ 111 (172)
..|-.|.+++... .+...+|++..+|+.|-...... ...-.|..+... .....+-.|+|+...+
T Consensus 43 ~~nQqW~~~~~~G----------~~G~Y~I~n~~SGkcLDV~~~st--anGt~V~qw~~~~~~~g~nQqW~l~~~~g--- 107 (293)
T 3ef2_A 43 NWHQLWLAEPIPN----------VADTFTLCNLFSGTYMDLYNGSS--EAGTAVNGWQGTAFTTNPHQLWTIKKSSD--- 107 (293)
T ss_dssp CTTCEEEEEECTT----------STTEEEEEETTTCCEEEEGGGCC--STTEEEEEECCCTTCCCGGGCEEEEECTT---
T ss_pred CccEEEEEeeccC----------CCceEEEEECCCCCEEecCCCCC--CCCCEEEEeccCCCCCCCCcEEEEEEeCC---
Confidence 3667788864210 13578999999999997753321 123345444410 0122388899877522
Q ss_pred eeeCCeEEEEEccCCeeeeecC
Q 030721 112 WRQDQRIRLQHVDTGGYLHSHP 133 (172)
Q Consensus 112 ~~~~~~~rL~H~~t~~~L~s~~ 133 (172)
+..++|++..+|+.|-..+
T Consensus 108 ---~G~y~I~n~~SGk~LDV~g 126 (293)
T 3ef2_A 108 ---GTSYKIQNYGSKTFVDLVN 126 (293)
T ss_dssp ---SSSEEEEETTTCCEEEEGG
T ss_pred ---CCEEEEEECCCCcEEEeCC
Confidence 1368899999999998654
No 51
>3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus}
Probab=27.29 E-value=2.4e+02 Score=22.51 Aligned_cols=102 Identities=12% Similarity=0.284 Sum_probs=61.2
Q ss_pred CCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceee
Q 030721 34 ANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWR 113 (172)
Q Consensus 34 ~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~ 113 (172)
.|-.|.+++. -.|...+|++..+|+.|-...... ...-.|..+.. .+..|-.|+++..
T Consensus 45 ~nQqW~l~~~-----------G~G~~Y~I~N~~SGKcLDV~g~sT--adGa~V~qW~~--nGg~NQqW~l~~~------- 102 (286)
T 3phz_A 45 LNNLWLIEPV-----------GEADTYTVRNAFAGSYMDLAGHAA--TDGTAIIGYRP--TGGDNQKWIISQI------- 102 (286)
T ss_dssp GGGCEEEEEC-----------SSTTEEEEEETTTCCEEEEGGGCC--STTEEEEEECC--CCCGGGCEEEEES-------
T ss_pred hHHEEEEEEC-----------CCCcEEEEEECCCCcEEEeCCCcC--CCCCeEEEeCC--CCChhcEEEEEcC-------
Confidence 4567887632 136678999999999997643211 12344544443 2567889998764
Q ss_pred eCCeEEEEEccCCeeeeecCCCCCCCCCCCeeEEEEcC--CCCCCcEEEEE
Q 030721 114 QDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVRE--KRADNVWLAAE 162 (172)
Q Consensus 114 ~~~~~rL~H~~t~~~L~s~~~~lp~~~~~q~EV~c~~~--~~~~~~W~ve~ 162 (172)
+..++|+++.+|++|-..+..-.+-+. |.-... ...+..|+++.
T Consensus 103 -~G~y~I~n~~SGkcLDV~~gsttanGa----V~qWt~~tgg~NQqW~~~~ 148 (286)
T 3phz_A 103 -NDVWKIKSKETGTFVTLLNGDGGGTGT----VVGWQNITNNTSQNWTFQK 148 (286)
T ss_dssp -SSCEEEEETTTCCEEEEETC---CCCE----EEEESCCCSSCTTCEEEEE
T ss_pred -CCeEEEEECCCCcEEEeCCCCcCCCce----EEEccCCCCCccCcEEEEE
Confidence 245899999999999843321001122 222221 14567898865
No 52
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3
Probab=26.07 E-value=2.8e+02 Score=22.94 Aligned_cols=59 Identities=17% Similarity=0.289 Sum_probs=36.1
Q ss_pred EEEEeccCCCceeecCCCCCCCCCeEEEEecCCCC-CCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecC
Q 030721 60 IRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEE-SDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHP 133 (172)
Q Consensus 60 I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~-~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~ 133 (172)
.++....||+|+........ | .|+.... .|.+..|.++..+ ...||++..||.||....
T Consensus 292 ~~~~~~~~g~~~~~~~~~g~------~-~yg~~~~~~~~~~~W~~~~~~--------g~~~ikn~~tg~y~~~~~ 351 (420)
T 1ups_A 292 YLIRNRQTGKFLYIEENNDK------V-SYGDITLKNEKNAKWSKEYRD--------GYTLLKNNETGEYLNIEN 351 (420)
T ss_dssp EEEEETTTCCEEECCTTCSS------C-EEECCCTTTTGGGCEEEEEET--------TEEEEEETTTCCEEECTT
T ss_pred ccccccCCCcEEEEeccCCe------e-eccCcccCCCcCceeEEEecC--------CcEEEeeccccceEcccc
Confidence 35555567777765433221 1 4554322 2344689976642 457899999999999754
No 53
>3snv_A Symfoil-4T/permutation #1 synthetic protein; beta-trefoil, de novo protein; 2.20A {Homo sapiens}
Probab=24.86 E-value=1.8e+02 Score=20.37 Aligned_cols=81 Identities=21% Similarity=0.305 Sum_probs=47.9
Q ss_pred ccccccCCCCceEEeecCCCCCCCCceeeeCCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEc
Q 030721 27 GFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIE 106 (172)
Q Consensus 27 ~~~~~~d~n~~W~I~~~~~~~~~~~~~V~~g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~ 106 (172)
+-..+.+....|.|. +|..| .|+|+-+.|+.||-... .-.|.+... ..++...+.+...
T Consensus 32 Gt~~~~~~~s~l~~~-----------sv~~G-~V~I~gv~sg~yL~m~~-------~G~v~Gs~~--~~~ec~flE~~~e 90 (143)
T 3snv_A 32 GTRDRSDTHIQFQIS-----------PEGNG-EVLLKSTETGQYLRINP-------DGTVDGTRD--RSDTHIQFQISPE 90 (143)
T ss_dssp EESCTTCTTSEEEEE-----------EEETT-EEEEEETTTTEEEEECT-------TSBEEEECC--TTCTTSEEEEEEC
T ss_pred eecCCCCCceEEEEE-----------eccCC-eEEEEEEcccEEEeECC-------CCCEeeccc--CCCcceEEEEEec
Confidence 333334555666653 44556 89999999999997743 234544432 1222222222222
Q ss_pred cCCceeeeCCeEEEEEccCCeeeeecCCC
Q 030721 107 GSGKTWRQDQRIRLQHVDTGGYLHSHPKK 135 (172)
Q Consensus 107 ~~~~~~~~~~~~rL~H~~t~~~L~s~~~~ 135 (172)
....+.++-+.++.||+-+..-
T Consensus 91 -------~~g~v~i~~~~sg~Ylamnk~G 112 (143)
T 3snv_A 91 -------GNGEVLLKSTETGQYLRINPDG 112 (143)
T ss_dssp -------STTEEEEEETTTCCEEEECTTS
T ss_pred -------CCcEEEEEEeeCCEEEEEcCCC
Confidence 1356777788999999987543
No 54
>2y9f_A LSL-150, hemolytic lectin LSLA; sugar binding protein; 1.47A {Laetiporus sulphureus} PDB: 2y9g_A*
Probab=24.33 E-value=2e+02 Score=20.52 Aligned_cols=91 Identities=21% Similarity=0.260 Sum_probs=55.9
Q ss_pred CCEEEEEeccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCCCC
Q 030721 57 GTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKY 136 (172)
Q Consensus 57 g~~I~L~H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~~l 136 (172)
|=-+||.|..+.+-|-+-....|.-...+| .....|.|-.-+.+.|+ ..-.+.|+...||+-|.|--.+
T Consensus 10 glyfRll~f~S~~Vi~a~~~~sp~v~~~~v-------~~~y~dQ~F~lI~g~ge---~~G~yaIkSk~Tg~vlfsr~~~- 78 (150)
T 2y9f_A 10 GLYFRLLGFASRQVIFARNSPSPDVGLSPV-------NDQATDQYFSLIYGTGE---HAGLYAIKSKATGKVLFSRRPA- 78 (150)
T ss_dssp TCCBEEEETTTCEEEEECSSSSCCEEEEEG-------GGCCGGGCEEEEECCGG---GTTCEEEEETTTCCEEEECSSS-
T ss_pred ceeeeeeccceeeEEEecCCCCcccccccc-------ccccCcEEEEEeccCCC---cCceEEEEecCcCcEEEEecCC-
Confidence 445899999999988887776664222222 13344566655654432 2345777789999999985433
Q ss_pred CCCCCCCeeEEEEcCC--CCCCcEEEEEee
Q 030721 137 QRIAGGQQEVCGVREK--RADNVWLAAEGV 164 (172)
Q Consensus 137 p~~~~~q~EV~c~~~~--~~~~~W~ve~~~ 164 (172)
+| -|-|.+.. -.++++.+|++-
T Consensus 79 -~p-----~vG~~d~Dgky~dnwF~~E~gk 102 (150)
T 2y9f_A 79 -EP-----YVGQIDGDGRYPDNWFKIEPGK 102 (150)
T ss_dssp -SS-----SEEEESSSSCSGGGCBEEEECC
T ss_pred -CC-----ccceeCCCCccccccEEEccCC
Confidence 22 24555432 246777888764
No 55
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=24.25 E-value=48 Score=21.19 Aligned_cols=30 Identities=10% Similarity=0.130 Sum_probs=22.4
Q ss_pred CCceeeeCCEEEEEeccC-CCceeecCCCCC
Q 030721 50 QGDTIKSGTIIRLQHMRT-RKWLHSHLHASP 79 (172)
Q Consensus 50 ~~~~V~~g~~I~L~H~~T-~~~Lhsh~~~~p 79 (172)
....|+.||+|++.+... ...+|.|....|
T Consensus 19 ~~i~v~~Gd~V~~~N~~~~~H~v~~~~~~~~ 49 (105)
T 3cvb_A 19 ANVTVHPGDTVKWVNNKLPPHNILFDDKQVP 49 (105)
T ss_dssp SEEEECTTEEEEEEECSSCCEEEEECTTSSG
T ss_pred CEEEEcCCCEEEEEECCCCCCeEEEeCCCCC
Confidence 346789999999988764 667888876544
No 56
>3f1r_A FGF-20, fibroblast growth factor 20; beta-trefoil fold, polymorphism, secreted, hormone; 2.50A {Homo sapiens}
Probab=23.90 E-value=91 Score=23.81 Aligned_cols=17 Identities=6% Similarity=0.270 Sum_probs=15.0
Q ss_pred CEEEEEeccCCCceeec
Q 030721 58 TIIRLQHMRTRKWLHSH 74 (172)
Q Consensus 58 ~~I~L~H~~T~~~Lhsh 74 (172)
..|+|+.+.|+.||=..
T Consensus 106 G~V~IkGv~S~~YLcMn 122 (211)
T 3f1r_A 106 GLVSIRGVDSGLYLGMN 122 (211)
T ss_dssp TEEEEEETTTCCEEEEC
T ss_pred CEEEEEEeecceEEEEC
Confidence 48999999999999664
No 57
>2x2s_A Agglutinin, agglutinin SSA; fungal lectin, beta-trefoil domain, cell adhesion; 1.60A {Sclerotinia sclerotiorum} PDB: 2x2t_A*
Probab=23.79 E-value=2.1e+02 Score=20.64 Aligned_cols=84 Identities=12% Similarity=0.261 Sum_probs=50.4
Q ss_pred eccCCCceeecCCCCCCCCCeEEEEecCCCCCCCCCcEEEEEc-cCCceeeeCCeEEEEEccCCeeeeecCCCCCCCCCC
Q 030721 64 HMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIE-GSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGG 142 (172)
Q Consensus 64 H~~T~~~Lhsh~~~~p~S~~qeVs~~~~~~~~d~~~~W~Ie~~-~~~~~~~~~~~~rL~H~~t~~~L~s~~~~lp~~~~~ 142 (172)
....++.|-.-... ....-+|-.|......-++..|.+... ..+ ....++|.++.+|.||...+..
T Consensus 14 ~~~s~~~L~v~~~~--t~~G~~Vr~y~r~~T~~d~qkw~~~~v~~~~----~~~~Y~Iinv~sG~~L~~~~~~------- 80 (153)
T 2x2s_A 14 YQAPSLNLNAWEGK--LEPGAVVRTYTRGDKPSDNAKWQVALVAGSG----DSAEYLIINVHSGYFLTATKEN------- 80 (153)
T ss_dssp TTCTTEEEEECCSS--CCSCEEEEEEECCSSCCGGGCEEEEEEECCG----GGCEEEEEETTTCCBCBCCSTT-------
T ss_pred ccCCCcceEecccc--CCCCceeEEeccCCCCCCcceeEEEEEeccC----CCceEEEEecCCccEEEecCCC-------
Confidence 44457777664421 122478888875334556888997554 111 1246779999999999987642
Q ss_pred CeeEEEEcC--C-CCCCcEEEEE
Q 030721 143 QQEVCGVRE--K-RADNVWLAAE 162 (172)
Q Consensus 143 q~EV~c~~~--~-~~~~~W~ve~ 162 (172)
|+.-... + +....|+|+.
T Consensus 81 --~~at~~q~sp~~~~~rWrI~~ 101 (153)
T 2x2s_A 81 --HIVSTPQISPTDPSARWTIKP 101 (153)
T ss_dssp --EECEECCCCTTCGGGCEEEEE
T ss_pred --CceEEEEEcCCCccceEEEEe
Confidence 3322211 1 3456788876
No 58
>3snv_A Symfoil-4T/permutation #1 synthetic protein; beta-trefoil, de novo protein; 2.20A {Homo sapiens}
Probab=21.17 E-value=2.2e+02 Score=19.94 Aligned_cols=42 Identities=26% Similarity=0.385 Sum_probs=29.6
Q ss_pred eEEEEecCCCCCCCCCcEEEEEccCCceeeeCCeEEEEEccCCeeeeecCC
Q 030721 84 LEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPK 134 (172)
Q Consensus 84 qeVs~~~~~~~~d~~~~W~Ie~~~~~~~~~~~~~~rL~H~~t~~~L~s~~~ 134 (172)
..|.+..+ ..+....|.|..+. . ..|+|+-+.|+.||.....
T Consensus 28 G~V~Gt~~--~~~~~s~l~~~sv~------~-G~V~I~gv~sg~yL~m~~~ 69 (143)
T 3snv_A 28 GTVDGTRD--RSDTHIQFQISPEG------N-GEVLLKSTETGQYLRINPD 69 (143)
T ss_dssp SBEEEESC--TTCTTSEEEEEEEE------T-TEEEEEETTTTEEEEECTT
T ss_pred CCEeeecC--CCCCceEEEEEecc------C-CeEEEEEEcccEEEeECCC
Confidence 46666654 24666777776653 2 3789999999999998643
Done!