BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 030725
         (172 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P45871|YWKD_BACSU Uncharacterized protein YwkD OS=Bacillus subtilis (strain 168)
           GN=ywkD PE=4 SV=1
          Length = 128

 Score = 32.3 bits (72), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 6/103 (5%)

Query: 72  KIGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 130
           K+G + I E    ++  Y+      G+ +I L   P+P     RPE  G  RH    +  
Sbjct: 26  KLGFQVIQETYREERGSYKLDLSLNGSYVIELFSFPDPPERQTRPEAAGL-RHLAFTVGS 84

Query: 131 VSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANALEFTQ 169
           + K    L + GI      T   +G+   F  DPD   LE  +
Sbjct: 85  LDKAVQELHEKGIETEPIRTDPLTGKRFTFFFDPDQLPLELYE 127


>sp|Q7PNM6|ATAT_ANOGA Alpha-tubulin N-acetyltransferase OS=Anopheles gambiae
           GN=AGAP005828 PE=3 SV=4
          Length = 483

 Score = 32.0 bits (71), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 31/128 (24%)

Query: 47  QFLTTKAKMSVEGGILKKEP--IRDSDKIGLEIN-----EARPHDKLPYRGAWLWVGAEM 99
           Q L  + +  VE G    EP   R +   GLE+      E  P+D +P  G         
Sbjct: 291 QRLADEMERCVELGAGGDEPDASRYTPHHGLEVKFADQPETLPYDDMPEPG--------- 341

Query: 100 IHLMELPNPDPLSGRPEH---------GGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS 150
                 P+PDP    P H         GG  R   ++ + VS+    +  AG  Y +  S
Sbjct: 342 ------PDPDPYDFHPHHLELHDDTEGGGSHRDQSLSPQSVSQQASPVHPAGSDYGVLGS 395

Query: 151 GRPAIFTR 158
            +PA +T+
Sbjct: 396 RKPARYTK 403


>sp|P25464|ACVS_ACRCH N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase
            OS=Acremonium chrysogenum GN=PCBAB PE=1 SV=1
          Length = 3712

 Score = 30.4 bits (67), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 11/65 (16%)

Query: 11   IPVRHQVNRLSVNFTLTYTSSQFYQTTT---------VRKCRCNGQFLTTKAKMSVEGGI 61
            + V+  VN L+VNF   Y +S F + T          + +   + +  T+ +K+SVE G+
Sbjct: 2361 VTVKESVNSLNVNFN--YPTSLFEEETVQGFMETFHLLLRQLAHNKASTSLSKLSVEDGV 2418

Query: 62   LKKEP 66
            L  EP
Sbjct: 2419 LNPEP 2423


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.135    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,273,708
Number of Sequences: 539616
Number of extensions: 2702454
Number of successful extensions: 5234
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5234
Number of HSP's gapped (non-prelim): 3
length of query: 172
length of database: 191,569,459
effective HSP length: 109
effective length of query: 63
effective length of database: 132,751,315
effective search space: 8363332845
effective search space used: 8363332845
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)