BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030729
(172 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1
Length = 189
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 10 FLVLIISALTAKEASAAQHTVGGSQGWVESADLNSWASGQTFKVGDQIVFKYTPGLHSVV 69
FL+ II+ A + A +TVG + GWV D ++WAS +TF VGD +VF Y G H+V
Sbjct: 11 FLLAIINM--ALPSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVD 68
Query: 70 ELPSESAYKSCDLGTAKDSMNSGNDVVKLVKPGTRYFACGTSGHCEQGMKVKI 122
E+ ES YKSC G + + ++G + L K G YF CG GH GMK+ I
Sbjct: 69 EVK-ESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSI 120
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1
Length = 108
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 25 AAQHTVGGSQGW--VESADLNSWASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSCDL 82
A H VG S GW + D WAS F VGD ++F Y H+V+++ E +KSC+
Sbjct: 1 ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQ-FKSCNS 59
Query: 83 GTAKDSMNSGNDVVKLVKPGTRYFACGTSGHCEQGMKVKITTFSGTA 129
+ S SG D + L +PGT YF CG GHC+ G KV+I G++
Sbjct: 60 SSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSS 106
>sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1
Length = 126
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 23 ASAAQHTVGGSQGWVESADLNSWASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSCDL 82
A + +TVG GW + + W +G+TF+ GD +VFKY P +H+VV +P+ YKSC
Sbjct: 28 AESVVYTVGDGGGW--TFGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPA-GGYKSCTA 84
Query: 83 GTAKDSMNSGNDVVKLVKPGTRYFACGTSGHCEQGMKVKIT 123
SG+D + L + GT YF C GHC+ G+K+ +T
Sbjct: 85 SPGSRVFKSGDDRITLSR-GTNYFICSVPGHCQGGLKIAVT 124
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1
Length = 187
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 10 FLVLIISALTAKEASAAQHTVGGSQ-GW---VESAD-LNSWASGQTFKVGDQIVFKYTPG 64
FLV++ L + A ++ VGGS+ W + D L+ WA+ FK+GD ++FKY
Sbjct: 11 FLVMLAMCLLISTSEAEKYVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEKR 70
Query: 65 LHSVVELPSESAYKSCD-LGTAKDSMNSGNDVVKLVKPGTRYFACGTSGHCEQGMKVKIT 123
SV E +E+ Y+ C+ +G N GN V L KPG R+F G HC+ G+K+ +
Sbjct: 71 TESVHE-GNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVL 129
Query: 124 TFS 126
S
Sbjct: 130 VIS 132
>sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1
Length = 107
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 28 HTVGGSQGW----VESADLN-SWASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSCDL 82
+TVG S GW D + WAS +TF +GD +VFKY H+V ++ ++ Y+SC+
Sbjct: 3 YTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKV-TQKNYQSCND 61
Query: 83 GTAKDSMNSGNDVVKLVKPGTRYFACGTSGHCEQGMKVKIT 123
T S N+GBB + L G +Y+ CG HC+ G KV I
Sbjct: 62 TTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHIN 102
>sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 SV=1
Length = 96
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 26 AQHTVGGSQGWVESADLNSWASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSCDLGTA 85
A + VGGS GW + + SW G+ F+ GD ++F Y P +H+VV + ++ + +C+
Sbjct: 1 AVYVVGGSGGWTFNTE--SWPKGKRFRAGDILLFNYNPXMHNVVVV-NQGGFSTCNTPAG 57
Query: 86 KDSMNSGNDVVKLVKPGTRYFACGTSGHCEQGMKVKIT 123
SG D +KL K G YF C GHC+ GMK+ +
Sbjct: 58 AKVYTSGRDQIKLPK-GQSYFICNFPGHCQSGMKIAVN 94
>sp|Q8LG89|BABL_ARATH Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=1 SV=2
Length = 129
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 8 RAFLVLI---ISALTAKEASAAQHTVGGSQGWVESADLNSWASGQTFKVGDQIVFKYTPG 64
RA + L+ + L A AA +TVG S W +A W G+ F+ GD +VF Y P
Sbjct: 13 RAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAV--GWPKGKHFRAGDVLVFNYNPR 70
Query: 65 LHSVVELPSESAYKSCDLGTAKDSMNSGNDVVKLVKPGTRYFACGTSGHCEQGMKVKIT 123
+H+VV++ S S Y +C T SG D + L K G +F C HCE MK+ +T
Sbjct: 71 MHNVVKVDSGS-YNNCKTPTGAKPYTSGKDRITLSK-GQNFFICNFPNHCESDMKIAVT 127
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 23 ASAAQHTVGGSQG-WV----ESADLNSWASGQTFKVGDQIVFKYTPGLHSVVELPSESAY 77
A+A + TVGG G W S WA FKVGD IVF+Y G SV+E+ E AY
Sbjct: 26 AAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKE-AY 84
Query: 78 KSCDLGTAKDSMNSGNDVVKLVKPGTRYFACGTSGHCEQGMKVKITTFS 126
SC+ + G VKL + G YF G +GHCE+G K+ + S
Sbjct: 85 NSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVIS 133
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1
Length = 202
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 36 WVESADLNSWASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSCDLGTAKDSMNSGNDV 95
W D + WA+G+TF+VGD + FKY G V++ ++ Y CD ++ ++ + G+
Sbjct: 36 WTTGVDYSGWATGKTFRVGDILEFKY--GSSHTVDVVDKAGYDGCDASSSTENHSDGDTK 93
Query: 96 VKLVKPGTRYFACGTSGHCEQ--GMKVKITTFSGTA 129
+ L G YF C T GHC GMK+ + +G+A
Sbjct: 94 IDLKTVGINYFICSTPGHCRTNGGMKLAVNVVAGSA 129
>sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3
Length = 137
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 16/112 (14%)
Query: 28 HTVGGSQGWVESADLN---SWASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSCDLGT 84
H VG + GW + N WA+G+TF+VGD + F + H+V E+ ++ ++ +C+
Sbjct: 5 HIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNF-- 62
Query: 85 AKDSMNSGNDV-------VKLVKPGTRYFACGTSGHCEQGMKVKITTFSGTA 129
+NS NDV +L + G YF C HC G K+ I + A
Sbjct: 63 ----VNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 110
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2
Length = 196
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 6/122 (4%)
Query: 27 QHTVGGSQGWVESAD---LNSWASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSCDLG 83
+ VG W D +WA+G+TF+VGD++ F + G H V + SE+A+++C+
Sbjct: 24 DYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVV-SEAAFENCEKE 82
Query: 84 TAKDSMNSGNDVVKLVKPGTRYFACGTSGHCEQGMKVKITTFS--GTAPSTPASSSSPAS 141
M + L G +YF C HC G K+ IT + T +TP + ++PA
Sbjct: 83 KPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAGATGGATPGAGATPAP 142
Query: 142 TS 143
S
Sbjct: 143 GS 144
>sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520
PE=1 SV=1
Length = 349
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 10 FLVLIISALTAKEASAAQH-TVGGSQGWVESADLN--SWASGQTFKVGDQIVFKYTPGLH 66
F +++S T S A+ VGGS WV + N SW+ F V D + F Y G
Sbjct: 12 FFTILLSLSTLFTISNARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGAD 71
Query: 67 SVVELPSESAYKSCDLGTAKDSMNSGNDVVKLVKPGTRYFACGTSGHCEQGMKVKITTFS 126
SV+E+ +++ Y +C+ ++ G+ + L + G YF G +C++G K+ + S
Sbjct: 72 SVLEV-NKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVIS 130
Query: 127 GTAPST 132
PST
Sbjct: 131 ARIPST 136
>sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1
Length = 115
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 27 QHTVGGSQGWVESADLN---SWASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSCDLG 83
+ VGG W +D +WA+G+TF+VGD++ F + G+H V + ++ A+ +C
Sbjct: 2 DYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVV-TKDAFDNCKKE 60
Query: 84 TAKDSMNSGNDVVKLVKPGTRYFACGTSGHCEQGMKVKIT 123
M + + L G +Y+ C HC G K+ I
Sbjct: 61 NPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSIN 100
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 39 SADLNSWASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSCDLGTAKDSMNSGNDVVKL 98
S LN WA F+VGD +V+KY SV+++ ++ AY +C+ + ++G+ VKL
Sbjct: 42 SESLNKWAESLRFRVGDTLVWKYDEEKDSVLQV-TKDAYINCNTTNPAANYSNGDTKVKL 100
Query: 99 VKPGTRYFACGTSGHCEQGMKVKITTFS 126
+ G +F G+ +C +G K+ I S
Sbjct: 101 ERSGPYFFISGSKSNCVEGEKLHIVVMS 128
>sp|Q5JNJ5|ENL1_ORYSJ Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica
GN=ENODL1 PE=1 SV=1
Length = 237
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Query: 31 GGSQGWV--ESADLNSWASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSCDLGTAKDS 88
GG GWV + N WA F+V D IVF + + V +E + +C G
Sbjct: 34 GGRDGWVVDPAESFNYWAERNRFQVNDTIVFLHDDEVGGSVLQVTEGDFDTCSTGNPVQR 93
Query: 89 MN---SGNDVVKLVKPGTRYFACGTSGHCEQGMKVKITTFSGTAPSTPASSSSPASTSGA 145
+ +G V + + G +F G C++G K+ I + P+ P+ + PA +G
Sbjct: 94 LEDVAAGRSVFRFDRSGPFFFISGDEDRCQKGQKLYIIVMA-VRPTKPSEAPEPAGAAGP 152
Query: 146 SSS 148
SS
Sbjct: 153 VSS 155
>sp|P93328|NO16_MEDTR Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1
Length = 180
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 45 WASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSCDLGTAKDSMNSGNDVVKLVKPGTR 104
WAS F VGD I+F+Y SV E+ +E Y C + GN V L K G
Sbjct: 49 WASAHEFTVGDTILFEYDNETESVHEV-NEHDYIMCHTNGEHVEHHDGNTKVVLDKIGVY 107
Query: 105 YFACGTSGHCEQGMKVKITT 124
+F GT HC+ G+K+ +
Sbjct: 108 HFISGTKRHCKMGLKLAVVV 127
>sp|P93329|NO20_MEDTR Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1
Length = 268
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 42 LNSWASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSCDLGTAKDSMNSGNDVVKLVKP 101
L WAS F VGD I F+Y SV E+ E Y C + GN +V L K
Sbjct: 46 LTRWASNYQFIVGDTITFQYNNKTESVHEV-EEEDYDRCGIRGEHVDHYDGNTMVVLKKT 104
Query: 102 GTRYFACGTSGHCEQGMKVKITT 124
G +F G HC G+K+ +
Sbjct: 105 GIHHFISGKKRHCRLGLKLAVVV 127
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1
Length = 172
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 23 ASAAQHTVGGSQGWVESADLNSWASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSC-- 80
+A ++TVG ++ W + + WA G+ F +GD + F + H+++E+ +++ Y+ C
Sbjct: 24 VTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEV-NKTDYEGCIA 82
Query: 81 DLGTAKDSMNSGNDVVKLVKPGTRYFACGTSGHCEQGMKVKITTFSGTAPSTPASSSSPA 140
D + +G D+V L + Y G G C GMK+ + P S+P
Sbjct: 83 DHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGG-CYGGMKLSVK----VEKLPPPPKSAPV 137
Query: 141 STSGASS 147
G+ S
Sbjct: 138 KNIGSVS 144
>sp|P00304|MPAA3_AMBEL Pollen allergen Amb a 3 OS=Ambrosia artemisiifolia var. elatior
PE=1 SV=2
Length = 101
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 28 HTVGGSQ--GWVESADLNS---WASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSCDL 82
+ VGG + GW +D + W++ Q FK D + F +T G SV E+ E AY +CD+
Sbjct: 4 YLVGGPELGGWKLQSDPRAYALWSARQQFKTTDVLWFNFTTGEDSVAEVWREEAYHACDI 63
Query: 83 GTAKDSMNSGNDVVKLVKPGTRYFAC 108
G D L+ PG+ +F C
Sbjct: 64 KDPIRLEPGGPDRFTLLTPGS-HFIC 88
>sp|Q05544|NO551_SOYBN Early nodulin-55-1 (Fragment) OS=Glycine max GN=ENOD55-1 PE=2 SV=1
Length = 137
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 60 KYTPGLHSVVELPSESAYKSCD-LGTAKDSMNSGNDVVKLVKPGTRYFACGTSGHCEQGM 118
KY SV E+ +E+ Y+ C+ +G N GN V L K G R+F G HC+ G+
Sbjct: 1 KYDERTESVHEV-NETDYEQCNTVGKEHVLFNDGNTKVMLTKSGFRHFISGNQSHCQMGL 59
Query: 119 KVKITTFSGTAP 130
K+ + S
Sbjct: 60 KLMVVVMSNNTK 71
>sp|A4G2A7|GCP_HERAR Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Herminiimonas arsenicoxydans GN=gcp PE=3 SV=1
Length = 342
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 12/62 (19%)
Query: 2 ERMNIKRAFLVLIISALTAKEASAAQHT----------VGGSQGWVESADLNSWASGQTF 51
++ NI RAF+ I+ LTAK +A +HT VG +Q ES LN+ A+ + F
Sbjct: 233 DKANIARAFVDAIVEVLTAKCVTALKHTGLKRLVIAGGVGANQQLRES--LNAAAAKKHF 290
Query: 52 KV 53
KV
Sbjct: 291 KV 292
>sp|Q52675|DSTOR_RHOCA Dimethyl sulfoxide/trimethylamine N-oxide reductase OS=Rhodobacter
capsulatus GN=dorA PE=1 SV=2
Length = 823
Score = 33.1 bits (74), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 28 HTVGGSQGWVESADLN----SWASGQTFKVGDQIVFKYTP-GLHSVVELPSESAYKSCDL 82
+ VGG+ +V D N +W +TF V D F++TP H+ + LP+ ++Y+ D+
Sbjct: 471 YWVGGNP-FVHHQDRNRMVKAWEKLETFIVHD---FQWTPTARHADIVLPATTSYERNDI 526
Query: 83 GTAKDSMNSGNDVV-KLVKP 101
T D N+G + K+V+P
Sbjct: 527 ETIGDYSNTGILAMKKIVEP 546
>sp|A5GI62|RIMM_SYNPW Ribosome maturation factor RimM OS=Synechococcus sp. (strain
WH7803) GN=rimM PE=3 SV=1
Length = 175
Score = 33.1 bits (74), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Query: 37 VESADLNSWASGQTFKVGDQIVFKYTPGLHSVVELPSESAYKSCD---LGTAKDSMNSGN 93
VES D GQT V + G +++L A S D +GT KD ++ GN
Sbjct: 73 VESRDAAEALVGQTLMVPADDRPELAEGEFHLLDLVGLEARLSADGDAIGTVKDLISGGN 132
Query: 94 DVVKLVKPGTRYF------ACGTSGHCEQG 117
D++ L +P R A H EQG
Sbjct: 133 DLLVLERPDGRTLMIPFVEAIVPDVHLEQG 162
>sp|Q8VRZ1|HPPA_ANAMA Pyrophosphate-energized proton pump (Fragment) OS=Anaplasma
marginale GN=hppA PE=3 SV=1
Length = 141
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 102 GTRYFACGTSGHCEQGMKVKITTFSGTAPSTPASSSSPASTSGASSSAFTSFASSV 157
GT F CG G G+ V IT + P +S + AS +G ++ A S+
Sbjct: 46 GTNLFVCGLIGLIVTGLIVVITEYYTGTNKRPVNSXAQASVTGHGTNVIQGLAVSL 101
>sp|Q8G1E6|HPPA_BRUSU K(+)-insensitive pyrophosphate-energized proton pump OS=Brucella
suis biovar 1 (strain 1330) GN=hppA PE=3 SV=1
Length = 718
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 102 GTRYFACGTSGHCEQGMKVKITTFSGTAPSTPASSSSPASTSGASSSAFTSFASSV 157
GT F CG G G+ V IT + P +S + AS +G ++ A S+
Sbjct: 335 GTNLFVCGLIGLIVTGLIVVITEYYTGTNKRPVNSIAQASVTGHGTNVIQGLAVSL 390
>sp|Q8YGH4|HPPA_BRUME K(+)-insensitive pyrophosphate-energized proton pump OS=Brucella
melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC
10094) GN=hppA PE=3 SV=2
Length = 718
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 102 GTRYFACGTSGHCEQGMKVKITTFSGTAPSTPASSSSPASTSGASSSAFTSFASSV 157
GT F CG G G+ V IT + P +S + AS +G ++ A S+
Sbjct: 335 GTNLFVCGLIGLIVTGLIVVITEYYTGTNKRPVNSIAQASVTGHGTNVIQGLAVSL 390
>sp|Q9T041|MAPT_ARATH Microtubule-associated protein TORTIFOLIA1 OS=Arabidopsis thaliana
GN=TOR1 PE=1 SV=2
Length = 864
Score = 30.4 bits (67), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 118 MKVKITTFSGTAPSTPASSSSPASTSGASSSAFTSFASSVPLVVALLAS 166
M T+ S P+ PA SSS A+ S ++S + TSF + V L +L S
Sbjct: 1 MSTPTTSGSAAKPTRPARSSSLATRSCSNSGSLTSFQAMVELKQKILTS 49
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.123 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,178,103
Number of Sequences: 539616
Number of extensions: 2151284
Number of successful extensions: 13998
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 11826
Number of HSP's gapped (non-prelim): 1689
length of query: 172
length of database: 191,569,459
effective HSP length: 109
effective length of query: 63
effective length of database: 132,751,315
effective search space: 8363332845
effective search space used: 8363332845
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)