Your job contains 1 sequence.
>030731
MSYGLPVMIYSFQLDAVIEAEKQAARDLIRQKRKDRALLALKKKKAQEELLKQVDGWLIN
VEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAI
LGEKLSAEDEEEILAEFDNLEAQVFAYIQFELAHNFYYSVLPFPHFSLSKQF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030731
(172 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2184767 - symbol:VPS20.2 "vacuolar protein sor... 444 6.6e-42 1
DICTYBASE|DDB_G0287021 - symbol:vps20 "SNF7 family protei... 202 2.9e-16 1
FB|FBgn0034744 - symbol:Vps20 "Vacuolar protein sorting 2... 187 1.1e-14 1
ZFIN|ZDB-GENE-040924-2 - symbol:chmp6b "chromatin modifyi... 169 9.1e-13 1
POMBASE|SPBC215.14c - symbol:vps20 "ESCRT III complex sub... 168 1.2e-12 1
ASPGD|ASPL0000059099 - symbol:vps20 species:162425 "Emeri... 164 3.1e-12 1
UNIPROTKB|G4MKC0 - symbol:MGG_02515 "Charged multivesicul... 152 5.8e-11 1
UNIPROTKB|F1NBY7 - symbol:CHMP6 "Charged multivesicular b... 149 1.2e-10 1
UNIPROTKB|Q5ZL55 - symbol:CHMP6 "Charged multivesicular b... 149 1.2e-10 1
WB|WBGene00022027 - symbol:vps-20 species:6239 "Caenorhab... 149 1.2e-10 1
UNIPROTKB|Q148L0 - symbol:CHMP6 "Chromatin modifying prot... 142 6.6e-10 1
UNIPROTKB|F1RZY6 - symbol:CHMP6 "Uncharacterized protein"... 137 2.2e-09 1
UNIPROTKB|F1PRE3 - symbol:CHMP6 "Uncharacterized protein"... 133 5.9e-09 1
MGI|MGI:3583942 - symbol:Chmp6 "charged multivesicular bo... 129 1.6e-08 1
RGD|1565325 - symbol:Chmp6 "charged multivesicular body p... 129 1.6e-08 1
UNIPROTKB|Q96FZ7 - symbol:CHMP6 "Charged multivesicular b... 128 2.0e-08 1
CGD|CAL0002935 - symbol:VPS20 species:5476 "Candida albic... 128 2.5e-08 1
UNIPROTKB|Q5AH99 - symbol:CaO19.8516 "Putative uncharacte... 128 2.5e-08 1
SGD|S000004682 - symbol:VPS20 "Myristoylated subunit of E... 128 2.8e-08 1
UNIPROTKB|I3L4A1 - symbol:CHMP6 "Charged multivesicular b... 128 3.0e-08 1
TAIR|locus:2119956 - symbol:SNF7.1 species:3702 "Arabidop... 127 3.5e-08 1
UNIPROTKB|I3L4G8 - symbol:CHMP6 "Charged multivesicular b... 123 6.8e-08 1
POMBASE|SPAC1142.07c - symbol:vps32 "ESCRT III complex su... 121 1.9e-07 1
TAIR|locus:2051970 - symbol:SNF7.2 species:3702 "Arabidop... 120 2.1e-07 1
UNIPROTKB|I3L3E4 - symbol:CHMP6 "Charged multivesicular b... 117 2.9e-07 1
ZFIN|ZDB-GENE-050417-389 - symbol:chmp4c "chromatin modif... 118 5.5e-07 1
CGD|CAL0005125 - symbol:SNF7 species:5476 "Candida albica... 114 1.3e-06 1
UNIPROTKB|Q5ABD0 - symbol:SNF7 "Vacuolar-sorting protein ... 114 1.3e-06 1
UNIPROTKB|Q5ZHP5 - symbol:CHMP4B "Charged multivesicular ... 114 1.3e-06 1
FB|FBgn0086656 - symbol:shrb "shrub" species:7227 "Drosop... 113 1.7e-06 1
UNIPROTKB|P59074 - symbol:CGI-301 "Putative protein CGI-3... 109 2.1e-06 1
SGD|S000004015 - symbol:SNF7 "Subunit of the ESCRT-III co... 110 4.4e-06 1
WB|WBGene00016497 - symbol:vps-32.2 species:6239 "Caenorh... 108 5.6e-06 1
UNIPROTKB|Q08E32 - symbol:CHMP4B "CHMP4B protein" species... 107 1.6e-05 1
UNIPROTKB|E2RDX2 - symbol:CHMP4B "Uncharacterized protein... 107 1.6e-05 1
UNIPROTKB|Q9H444 - symbol:CHMP4B "Charged multivesicular ... 107 1.6e-05 1
UNIPROTKB|F1S4Z2 - symbol:CHMP4B "Uncharacterized protein... 107 1.6e-05 1
MGI|MGI:1922858 - symbol:Chmp4b "charged multivesicular b... 107 1.6e-05 1
RGD|1564543 - symbol:Chmp4c "charged multivesicular body ... 106 4.6e-05 1
ZFIN|ZDB-GENE-040426-906 - symbol:zgc:56112 "zgc:56112" s... 105 6.4e-05 1
UNIPROTKB|I3LG19 - symbol:CHMP4C "Uncharacterized protein... 102 0.00013 1
MGI|MGI:1913621 - symbol:Chmp4c "charged multivesicular b... 104 0.00013 1
DICTYBASE|DDB_G0277133 - symbol:DDB_G0277133 "SNF7 family... 105 0.00028 1
WB|WBGene00020025 - symbol:R12C12.5 species:6239 "Caenorh... 102 0.00030 1
POMBASE|SPCC162.06c - symbol:SPCC162.06c "vacuolar sortin... 99 0.00070 1
ZFIN|ZDB-GENE-040426-2812 - symbol:chmp4b "chromatin modi... 99 0.00083 1
UNIPROTKB|P0C149 - symbol:SNF7 "Vacuolar-sorting protein ... 99 0.00085 1
>TAIR|locus:2184767 [details] [associations]
symbol:VPS20.2 "vacuolar protein sorting-associated
protein 20.2" species:3702 "Arabidopsis thaliana" [GO:0005737
"cytoplasm" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0015031
EMBL:AL391712 GO:GO:0000815 eggNOG:NOG291677 HOGENOM:HOG000208642
KO:K12195 EMBL:BT010522 EMBL:AK175654 IPI:IPI00521076
RefSeq:NP_196488.1 UniGene:At.32537 ProteinModelPortal:Q9FY89
SMR:Q9FY89 IntAct:Q9FY89 STRING:Q9FY89 PaxDb:Q9FY89 PRIDE:Q9FY89
EnsemblPlants:AT5G09260.1 GeneID:830785 KEGG:ath:AT5G09260
TAIR:At5g09260 InParanoid:Q9FY89 OMA:IVEDMPE PhylomeDB:Q9FY89
ProtClustDB:CLSN2687484 Genevestigator:Q9FY89 Uniprot:Q9FY89
Length = 216
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 95/133 (71%), Positives = 101/133 (75%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
Y QL+ VIEAEKQAARDLI VD WLINVEQQLADIE
Sbjct: 31 YQQQLEKVIEAEKQAARDLIREKRKDRALLALKKKRTQEELLKQVDQWLINVEQQLADIE 90
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAED 129
L SKQKAVFESLK G NAIKAIQSE+NL+DVQKLMDDT EAKAYQDE++AILGEKLSAED
Sbjct: 91 LTSKQKAVFESLKQGNNAIKAIQSEVNLDDVQKLMDDTAEAKAYQDELSAILGEKLSAED 150
Query: 130 EEEILAEFDNLEA 142
EEEILAEFDNLE+
Sbjct: 151 EEEILAEFDNLES 163
>DICTYBASE|DDB_G0287021 [details] [associations]
symbol:vps20 "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0287021 GenomeReviews:CM000153_GR GO:GO:0015031
EMBL:AAFI02000095 GO:GO:0000815 eggNOG:NOG291677 KO:K12195
RefSeq:XP_637438.1 STRING:Q54KZ4 PRIDE:Q54KZ4
EnsemblProtists:DDB0234035 GeneID:8625906 KEGG:ddi:DDB_G0287021
InParanoid:Q54KZ4 Uniprot:Q54KZ4
Length = 218
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 40/89 (44%), Positives = 62/89 (69%)
Query: 58 LINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEI 117
L N+E+ +A++E A Q +FESLK G ++K IQ E++LEDV+ LM++T EA YQ++I
Sbjct: 81 LQNIEELIANVEQAEIQVRIFESLKQGNESLKEIQKEMSLEDVENLMEETAEAIQYQNDI 140
Query: 118 NAILGEKLSAEDEEEILAEFDNLEAQVFA 146
+ L K S E+E+++L E D +E Q+ A
Sbjct: 141 SEALSGKFSKEEEDDLLNELDEMEKQLNA 169
>FB|FBgn0034744 [details] [associations]
symbol:Vps20 "Vacuolar protein sorting 20" species:7227
"Drosophila melanogaster" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 EMBL:AE013599
GO:GO:0015031 KO:K12195 OMA:DAITQEQ GeneTree:ENSGT00530000063571
RefSeq:NP_611686.2 RefSeq:NP_726213.1 GeneID:37581
KEGG:dme:Dmel_CG4071 CTD:37581 FlyBase:FBgn0034744 ChiTaRS:CHMP6
GenomeRNAi:37581 NextBio:804396 ProteinModelPortal:Q9W236
SMR:Q9W236 IntAct:Q9W236 MINT:MINT-294316 STRING:Q9W236
PRIDE:Q9W236 EnsemblMetazoa:FBtr0071856 EnsemblMetazoa:FBtr0308602
UCSC:CG4071-RA InParanoid:Q9W236 PhylomeDB:Q9W236
ArrayExpress:Q9W236 Bgee:Q9W236 Uniprot:Q9W236
Length = 212
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 41/134 (30%), Positives = 71/134 (52%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
Y +++ +E ++ AR + D L N+E+ ADIE
Sbjct: 37 YQKRIETQLENDRLLARKCLQQGRKDRAKLLLRKKKYQESLLTNADKQLENLEKLAADIE 96
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAED 129
A + V + LK+G A+K + +++++V+++MD+T E Q EI+AIL + L+ +D
Sbjct: 97 FAQVEMKVLDGLKAGNAALKKVHEMLDIDEVERIMDETREGIEKQQEIDAILTDVLTTQD 156
Query: 130 EEEILAEFDNLEAQ 143
EE++LAE D LEA+
Sbjct: 157 EEDVLAELDALEAE 170
>ZFIN|ZDB-GENE-040924-2 [details] [associations]
symbol:chmp6b "chromatin modifying protein 6b"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-040924-2 GO:GO:0031902 GO:GO:0015031 GO:GO:0012505
eggNOG:NOG291677 HOGENOM:HOG000208642 HOVERGEN:HBG080510 KO:K12195
OrthoDB:EOG4DBTG6 EMBL:AY648810 EMBL:BC095171 IPI:IPI00481351
RefSeq:NP_001003874.1 UniGene:Dr.77489 ProteinModelPortal:Q503V0
STRING:Q503V0 GeneID:445397 KEGG:dre:445397 CTD:445397
InParanoid:Q503V0 NextBio:20832102 Bgee:Q503V0 Uniprot:Q503V0
Length = 206
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
Y ++ ++ E+Q A+ L+ + + N+E+ + DIE
Sbjct: 33 YQKRITLQMDKERQLAKQLLKDGKKDKALLLLKKKRYQDQLLEKTENQISNLERMVQDIE 92
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAED 129
A + V E LK G + +K + +++E+V+K+MD+T +A YQ +I+ +L L+ ED
Sbjct: 93 FAQIEMKVIEGLKVGNDCLKKMHEVLSIEEVEKIMDETHDAIEYQKQIDEMLAGSLTQED 152
Query: 130 EEEILAEFD 138
EE +LAE +
Sbjct: 153 EEAVLAELE 161
>POMBASE|SPBC215.14c [details] [associations]
symbol:vps20 "ESCRT III complex subunit Vps20"
species:4896 "Schizosaccharomyces pombe" [GO:0000815 "ESCRT III
complex" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0006900 "membrane
budding" evidence=IC] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045324
"late endosome to vacuole transport" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 PomBase:SPBC215.14c GO:GO:0005938
GO:GO:0005774 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000815
GO:GO:0043328 eggNOG:NOG291677 KO:K12195 OMA:DAITQEQ GO:GO:0006900
PIR:T39904 RefSeq:NP_596691.1 ProteinModelPortal:O94318
STRING:O94318 EnsemblFungi:SPBC215.14c.1 GeneID:2540725
KEGG:spo:SPBC215.14c OrthoDB:EOG46DQCG NextBio:20801847
Uniprot:O94318
Length = 226
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 41/131 (31%), Positives = 66/131 (50%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
YS +L+ + + E AR + G L N+EQ L+ IE
Sbjct: 28 YSKRLEKIEQLEIDIARKCLRDSDKRGALRALKAKKLYSGLITQTYGQLGNIEQLLSTIE 87
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAED 129
QK V L+ GTN I+ +Q+++ LE V ++ +D +EA +Y DE+N +L ++S +
Sbjct: 88 FTLIQKDVMFGLQEGTNLIRQLQADMPLERVGRICNDRDEAMSYVDEVNDMLQGRMSRDQ 147
Query: 130 EEEILAEFDNL 140
E+EI E D+L
Sbjct: 148 EDEIQEELDSL 158
>ASPGD|ASPL0000059099 [details] [associations]
symbol:vps20 species:162425 "Emericella nidulans"
[GO:0070676 "intralumenal vesicle formation" evidence=IEA]
[GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005938 "cell cortex"
evidence=IEA] [GO:0000815 "ESCRT III complex" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 EMBL:BN001308 GO:GO:0015031
HOGENOM:HOG000208642 OMA:DAITQEQ EnsemblFungi:CADANIAT00001246
Uniprot:C8VRW4
Length = 208
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 35/90 (38%), Positives = 56/90 (62%)
Query: 55 DGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEIN-LEDVQKLMDDTEEAKAY 113
D L +EQ + +E A QK V L+ GT ++ I E+ +E V+KL+ +TEEA+AY
Sbjct: 75 DAQLAQLEQLTSQVEFALVQKDVLYGLQQGTQVLQMINKEMGGIEGVEKLLGETEEARAY 134
Query: 114 QDEINAILGEKLSAEDEEEILAEFDNLEAQ 143
Q+EI+ +L LS +DE+E+ E + L+ +
Sbjct: 135 QEEISQMLAGNLSNQDEDEVEDELEALQRE 164
>UNIPROTKB|G4MKC0 [details] [associations]
symbol:MGG_02515 "Charged multivesicular body protein 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:CM001231 KO:K12195 RefSeq:XP_003709323.1
ProteinModelPortal:G4MKC0 EnsemblFungi:MGG_02515T0 GeneID:2681612
KEGG:mgr:MGG_02515 Uniprot:G4MKC0
Length = 202
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 36/91 (39%), Positives = 54/91 (59%)
Query: 55 DGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEIN-LEDVQKLMDDTEEAKAY 113
D L +E+ +E A QK V L+ GT ++ I E+ +E V+KLM +T +A AY
Sbjct: 73 DAQLDQLEKLANSVEFALIQKDVVFGLQQGTKVLEEIHKEMGGIEHVEKLMGETADAIAY 132
Query: 114 QDEINAILGEKLSAEDEEEILAEFDNLEAQV 144
Q EI+ +LG +S +DE+E+ E LEA+V
Sbjct: 133 QKEISEMLGNSMSNQDEDEVEDELAALEAEV 163
>UNIPROTKB|F1NBY7 [details] [associations]
symbol:CHMP6 "Charged multivesicular body protein 6"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
IPI:IPI00585289 OMA:DAITQEQ GeneTree:ENSGT00530000063571
EMBL:AADN02053516 Ensembl:ENSGALT00000031461 ArrayExpress:F1NBY7
Uniprot:F1NBY7
Length = 197
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/129 (25%), Positives = 62/129 (48%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
Y ++ +E E++ AR L+ D + N+E+ + DIE
Sbjct: 30 YQKRISLGLERERELARQLLKEGKKEKAMLLLKKKRYQEQLLDKTDNQISNLERMVQDIE 89
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAED 129
+ V E LK G + + +++E+V++++ +T++A YQ +I+ IL L+ ED
Sbjct: 90 FTQIEMKVIEGLKIGNECLNKMHQVMSIEEVERIIGETQDAVEYQRQIDEILAGSLTEED 149
Query: 130 EEEILAEFD 138
E+ IL E +
Sbjct: 150 EDAILEELN 158
>UNIPROTKB|Q5ZL55 [details] [associations]
symbol:CHMP6 "Charged multivesicular body protein 6"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0012505 "endomembrane system" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0047485
"protein N-terminus binding" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0031902 GO:GO:0015031 GO:GO:0012505
EMBL:AJ719879 IPI:IPI00585289 RefSeq:NP_001026700.1
UniGene:Gga.6206 ProteinModelPortal:Q5ZL55 STRING:Q5ZL55
GeneID:428673 KEGG:gga:428673 CTD:79643 eggNOG:NOG291677
HOGENOM:HOG000208642 HOVERGEN:HBG080510 InParanoid:Q5ZL55 KO:K12195
OrthoDB:EOG4DBTG6 NextBio:20829603 ArrayExpress:Q5ZL55
Uniprot:Q5ZL55
Length = 200
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/129 (25%), Positives = 62/129 (48%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
Y ++ +E E++ AR L+ D + N+E+ + DIE
Sbjct: 33 YQKRISLGLERERELARQLLKEGKKEKAMLLLKKKRYQEQLLDKTDNQISNLERMVQDIE 92
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAED 129
+ V E LK G + + +++E+V++++ +T++A YQ +I+ IL L+ ED
Sbjct: 93 FTQIEMKVIEGLKIGNECLNKMHQVMSIEEVERIIGETQDAVEYQRQIDEILAGSLTEED 152
Query: 130 EEEILAEFD 138
E+ IL E +
Sbjct: 153 EDAILEELN 161
>WB|WBGene00022027 [details] [associations]
symbol:vps-20 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] InterPro:IPR005024 Pfam:PF03357 GO:GO:0008340
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0032940
GO:GO:0015031 GO:GO:0010171 GO:GO:0040011 eggNOG:NOG291677
HOGENOM:HOG000208642 KO:K12195 GeneTree:ENSGT00530000063571
EMBL:FO081482 RefSeq:NP_490762.1 ProteinModelPortal:Q9BL60
SMR:Q9BL60 STRING:Q9BL60 PaxDb:Q9BL60 EnsemblMetazoa:Y65B4A.3
GeneID:171654 KEGG:cel:CELE_Y65B4A.3 UCSC:Y65B4A.3 CTD:171654
WormBase:Y65B4A.3 InParanoid:Q9BL60 OMA:WESETWI NextBio:872165
Uniprot:Q9BL60
Length = 208
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 34/132 (25%), Positives = 65/132 (49%)
Query: 18 IEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAV 77
+E E+Q A+ LI L +EQ + D+E A Q+ V
Sbjct: 45 LEKERQLAKQLIKDGRKDRALLLLKKKRYQEKIIDQTLNHLSKIEQMVNDLEFAEVQQRV 104
Query: 78 FESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEF 137
+ L+ G A+K + +++++ ++M++T+EA YQ+EI+ +L +LS D ++ E
Sbjct: 105 TDGLRQGNEALKKMNQLFDIDEIDRIMEETKEAAEYQEEISNMLSGQLSNTDVSDVEKEL 164
Query: 138 DNLEAQVFAYIQ 149
++L A + +Q
Sbjct: 165 EDLLAAEWGTVQ 176
>UNIPROTKB|Q148L0 [details] [associations]
symbol:CHMP6 "Chromatin modifying protein 6" species:9913
"Bos taurus" [GO:0047485 "protein N-terminus binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 CTD:79643 eggNOG:NOG291677
HOGENOM:HOG000208642 HOVERGEN:HBG080510 KO:K12195 OrthoDB:EOG4DBTG6
OMA:DAITQEQ GeneTree:ENSGT00530000063571 EMBL:DAAA02049440
EMBL:BC118185 IPI:IPI00705933 RefSeq:NP_001068925.1
UniGene:Bt.26731 STRING:Q148L0 Ensembl:ENSBTAT00000018623
GeneID:510596 KEGG:bta:510596 InParanoid:Q148L0 NextBio:20869528
Uniprot:Q148L0
Length = 201
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 31/129 (24%), Positives = 60/129 (46%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
Y ++ +E E++ AR L+ + + ++E + IE
Sbjct: 33 YQKRITQQLEREREIARQLLRDGRKERAKLLLKKKRYREQLLDKTENQITSLETMVQSIE 92
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAED 129
+ V E LK G + + +++E+V++++D+T+EA YQ +I+ +L + ED
Sbjct: 93 FTQIEMKVIEGLKIGNECLNKMHQVMSIEEVERILDETQEAVDYQRQIDELLAGSFTQED 152
Query: 130 EEEILAEFD 138
E+ IL E D
Sbjct: 153 EDAILEELD 161
>UNIPROTKB|F1RZY6 [details] [associations]
symbol:CHMP6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0047485 "protein N-terminus binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 OMA:DAITQEQ GeneTree:ENSGT00530000063571
EMBL:CU993801 Ensembl:ENSSSCT00000018659 Uniprot:F1RZY6
Length = 180
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 32/136 (23%), Positives = 63/136 (46%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
Y ++ +E E++ AR L+ + + ++E + IE
Sbjct: 12 YQKRITQQLEREREIARQLLRDGRKERAKLLLKKKRYREQLLDKTENQITSLETMVQSIE 71
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAED 129
+ V E L+ G + + +++E+V++++D+T+EA YQ +I+ +L + ED
Sbjct: 72 FTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGSFTQED 131
Query: 130 EEEILAEFDNL-EAQV 144
E IL E D + + QV
Sbjct: 132 EAAILEELDAITQEQV 147
>UNIPROTKB|F1PRE3 [details] [associations]
symbol:CHMP6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00530000063571 OMA:IVEDMPE EMBL:AAEX03006193
Ensembl:ENSCAFT00000009186 Uniprot:F1PRE3
Length = 180
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 29/129 (22%), Positives = 61/129 (47%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
Y ++ +E E++ AR L+ + + ++E + IE
Sbjct: 12 YQKRITQQLEREREIARQLLRDGKKDRAKLLLKKKRYREQLLDKTENQISSLETMVQSIE 71
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAED 129
+ V E L+ G +K + +++E+V++++++T+EA YQ +I+ +L + ED
Sbjct: 72 FTQIEMKVVEGLQIGNECLKKMHQVMSIEEVERILEETQEAVEYQRQIDELLAGSFTQED 131
Query: 130 EEEILAEFD 138
E+ IL E +
Sbjct: 132 EDAILEELN 140
>MGI|MGI:3583942 [details] [associations]
symbol:Chmp6 "charged multivesicular body protein 6"
species:10090 "Mus musculus" [GO:0005575 "cellular_component"
evidence=ND] [GO:0005768 "endosome" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0047485
"protein N-terminus binding" evidence=ISO] InterPro:IPR005024
Pfam:PF03357 MGI:MGI:3583942 GO:GO:0031902 GO:GO:0015031
GO:GO:0012505 HOGENOM:HOG000238748 CTD:79643 eggNOG:NOG291677
HOVERGEN:HBG080510 KO:K12195 OrthoDB:EOG4DBTG6 OMA:DAITQEQ
EMBL:BI157958 IPI:IPI00110956 RefSeq:NP_001078967.1
UniGene:Mm.306673 ProteinModelPortal:P0C0A3 SMR:P0C0A3
STRING:P0C0A3 PhosphoSite:P0C0A3 PaxDb:P0C0A3 PRIDE:P0C0A3
Ensembl:ENSMUST00000026434 GeneID:208092 KEGG:mmu:208092
GeneTree:ENSGT00530000063571 InParanoid:P0C0A3 NextBio:372136
Bgee:P0C0A3 CleanEx:MM_CHMP6 Genevestigator:P0C0A3
GermOnline:ENSMUSG00000025371 Uniprot:P0C0A3
Length = 200
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 29/129 (22%), Positives = 59/129 (45%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
Y ++ +E E+ AR L+ + + ++E + IE
Sbjct: 33 YQKRVTQQLERERALARQLLRDGRKERAKLLLKKKRYREQLLDRTENQISSLEAMVQSIE 92
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAED 129
+ V E L+ G + + +++E+V++++D+T+EA YQ +I+ +L + ED
Sbjct: 93 FTQIEMKVMEGLQVGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGNFTQED 152
Query: 130 EEEILAEFD 138
E+ IL E +
Sbjct: 153 EDAILEELN 161
>RGD|1565325 [details] [associations]
symbol:Chmp6 "charged multivesicular body protein 6"
species:10116 "Rattus norvegicus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA;ISO] InterPro:IPR005024 Pfam:PF03357 RGD:1565325
GO:GO:0015031 EMBL:CH473948 CTD:79643 KO:K12195 OrthoDB:EOG4DBTG6
GeneTree:ENSGT00530000063571 IPI:IPI00364337 RefSeq:NP_001099326.1
UniGene:Rn.7707 Ensembl:ENSRNOT00000005379 GeneID:287873
KEGG:rno:287873 NextBio:627155 Uniprot:D3ZDR2
Length = 200
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 29/129 (22%), Positives = 59/129 (45%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
Y ++ +E E+ AR L+ + + ++E + IE
Sbjct: 33 YQKRVTQQLERERALARQLLRDGRKERAKLLLKKKRYREQLLDRTENQISSLEAMVQSIE 92
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAED 129
+ V E L+ G + + +++E+V++++D+T+EA YQ +I+ +L + ED
Sbjct: 93 FTQIEMKVMEGLQVGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGSFTQED 152
Query: 130 EEEILAEFD 138
E+ IL E +
Sbjct: 153 EDAILEELN 161
>UNIPROTKB|Q96FZ7 [details] [associations]
symbol:CHMP6 "Charged multivesicular body protein 6"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0012505 "endomembrane system" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0047485
"protein N-terminus binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 GO:GO:0012505 GO:GO:0016197
GO:GO:0016044 CTD:79643 eggNOG:NOG291677 HOGENOM:HOG000208642
HOVERGEN:HBG080510 KO:K12195 OrthoDB:EOG4DBTG6 EMBL:AY329087
EMBL:AK021811 EMBL:CR457284 EMBL:AK223187 EMBL:AK292105
EMBL:BC010108 IPI:IPI00305423 RefSeq:NP_078867.2 UniGene:Hs.514560
PDB:2K3W PDB:3HTU PDBsum:2K3W PDBsum:3HTU ProteinModelPortal:Q96FZ7
SMR:Q96FZ7 IntAct:Q96FZ7 MINT:MINT-5003442 STRING:Q96FZ7
PhosphoSite:Q96FZ7 DMDM:73917777 PaxDb:Q96FZ7 PRIDE:Q96FZ7
DNASU:79643 Ensembl:ENST00000325167 GeneID:79643 KEGG:hsa:79643
UCSC:uc002jyw.4 GeneCards:GC17P078965 HGNC:HGNC:25675 HPA:HPA023001
HPA:HPA024460 MIM:610901 neXtProt:NX_Q96FZ7 PharmGKB:PA142672114
InParanoid:Q96FZ7 OMA:DAITQEQ PhylomeDB:Q96FZ7
EvolutionaryTrace:Q96FZ7 GenomeRNAi:79643 NextBio:68773 Bgee:Q96FZ7
CleanEx:HS_CHMP6 Genevestigator:Q96FZ7 GermOnline:ENSG00000176108
Uniprot:Q96FZ7
Length = 201
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 29/127 (22%), Positives = 58/127 (45%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
Y ++ +E E+ AR L+ + + ++E + IE
Sbjct: 33 YQKRIAQQLERERALARQLLRDGRKERAKLLLKKKRYQEQLLDRTENQISSLEAMVQSIE 92
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAED 129
+ V E L+ G + + +++E+V++++D+T+EA YQ +I+ +L + ED
Sbjct: 93 FTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGSFTQED 152
Query: 130 EEEILAE 136
E+ IL E
Sbjct: 153 EDAILEE 159
>CGD|CAL0002935 [details] [associations]
symbol:VPS20 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0036178 "filamentous growth
of a population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0071467 "cellular response to pH" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0071285
"cellular response to lithium ion" evidence=IMP] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0000815 "ESCRT III complex" evidence=IEA]
[GO:0036177 "filamentous growth of a population of unicellular
organisms in response to pH" evidence=IMP] [GO:0070676
"intralumenal vesicle formation" evidence=IEA] [GO:0043328 "protein
targeting to vacuole involved in ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0002935
GO:GO:0036178 GO:GO:0015031 GO:GO:0071285 GO:GO:0071467
eggNOG:NOG291677 KO:K12195 EMBL:AACQ01000019 EMBL:AACQ01000018
RefSeq:XP_721018.1 RefSeq:XP_721139.1 ProteinModelPortal:Q5AH99
STRING:Q5AH99 GeneID:3637272 GeneID:3637427 KEGG:cal:CaO19.8516
KEGG:cal:CaO19.897 Uniprot:Q5AH99
Length = 216
Score = 128 (50.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 31/142 (21%), Positives = 65/142 (45%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
Y +L+ +IE + + A+ + L N+E+ + IE
Sbjct: 30 YQKRLNTIIEKQTELAKKAVLNKQPEKAKFYLRSKKQQESVISTTFDQLNNLEKLIGTIE 89
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILG--EKLSA 127
+K V L+ G ++ + +E+ +E + L+D E+ K DE++ +LG ++L+
Sbjct: 90 FKLIEKDVVYGLQQGNKVLQKLNNEMQVEKIDALIDQLEDEKLKVDEVSELLGGVDQLNR 149
Query: 128 EDEEEILAEFDNLEAQVFAYIQ 149
+E+E+ EF L+ ++ I+
Sbjct: 150 SEEDEVDKEFQTLQEEIHGKIK 171
>UNIPROTKB|Q5AH99 [details] [associations]
symbol:CaO19.8516 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0036178
"filamentous growth of a population of unicellular organisms in
response to neutral pH" evidence=IMP] [GO:0071285 "cellular
response to lithium ion" evidence=IMP] [GO:0071467 "cellular
response to pH" evidence=IMP] InterPro:IPR005024 Pfam:PF03357
CGD:CAL0002935 GO:GO:0036178 GO:GO:0015031 GO:GO:0071285
GO:GO:0071467 eggNOG:NOG291677 KO:K12195 EMBL:AACQ01000019
EMBL:AACQ01000018 RefSeq:XP_721018.1 RefSeq:XP_721139.1
ProteinModelPortal:Q5AH99 STRING:Q5AH99 GeneID:3637272
GeneID:3637427 KEGG:cal:CaO19.8516 KEGG:cal:CaO19.897
Uniprot:Q5AH99
Length = 216
Score = 128 (50.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 31/142 (21%), Positives = 65/142 (45%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
Y +L+ +IE + + A+ + L N+E+ + IE
Sbjct: 30 YQKRLNTIIEKQTELAKKAVLNKQPEKAKFYLRSKKQQESVISTTFDQLNNLEKLIGTIE 89
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILG--EKLSA 127
+K V L+ G ++ + +E+ +E + L+D E+ K DE++ +LG ++L+
Sbjct: 90 FKLIEKDVVYGLQQGNKVLQKLNNEMQVEKIDALIDQLEDEKLKVDEVSELLGGVDQLNR 149
Query: 128 EDEEEILAEFDNLEAQVFAYIQ 149
+E+E+ EF L+ ++ I+
Sbjct: 150 SEEDEVDKEFQTLQEEIHGKIK 171
>SGD|S000004682 [details] [associations]
symbol:VPS20 "Myristoylated subunit of ESCRTIII" species:4932
"Saccharomyces cerevisiae" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045324 "late endosome to vacuole transport" evidence=IMP;IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0000815 "ESCRT III
complex" evidence=IDA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0005768 "endosome" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0043162 "ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IC]
InterPro:IPR005024 Pfam:PF03357 SGD:S000004682 GO:GO:0005774
GO:GO:0015031 EMBL:BK006946 EMBL:Z49259 GO:GO:0045324 GO:GO:0000815
eggNOG:NOG291677 HOGENOM:HOG000208642 KO:K12195 OMA:DAITQEQ
GeneTree:ENSGT00530000063571 GO:GO:0043162 GO:GO:0070676
OrthoDB:EOG46DQCG PIR:S54452 RefSeq:NP_013794.1
ProteinModelPortal:Q04272 DIP:DIP-1961N IntAct:Q04272
MINT:MINT-390066 STRING:Q04272 PaxDb:Q04272 EnsemblFungi:YMR077C
GeneID:855101 KEGG:sce:YMR077C NextBio:978422 Genevestigator:Q04272
GermOnline:YMR077C Uniprot:Q04272
Length = 221
Score = 128 (50.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 29/89 (32%), Positives = 51/89 (57%)
Query: 58 LINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEI 117
LIN+E ++ +E +K LK+G +K + E + +V +LMDD ++ AYQ+EI
Sbjct: 83 LINLENMVSTLEFKMVEKQFINGLKNGNEILKKLNKEFS--NVDELMDDVQDQIAYQNEI 140
Query: 118 NAILGEKL--SAEDEEEILAEFDNLEAQV 144
N L L ++ E+++ E D LE+++
Sbjct: 141 NETLSRSLVGTSNYEDDLDKELDALESEL 169
>UNIPROTKB|I3L4A1 [details] [associations]
symbol:CHMP6 "Charged multivesicular body protein 6"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
HGNC:HGNC:25675 EMBL:AC127496 Ensembl:ENST00000572778 Bgee:I3L4A1
Uniprot:I3L4A1
Length = 224
Score = 128 (50.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 29/127 (22%), Positives = 58/127 (45%)
Query: 10 YSFQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIE 69
Y ++ +E E+ AR L+ + + ++E + IE
Sbjct: 12 YQKRIAQQLERERALARQLLRDGRKERAKLLLKKKRYQEQLLDRTENQISSLEAMVQSIE 71
Query: 70 LASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAED 129
+ V E L+ G + + +++E+V++++D+T+EA YQ +I+ +L + ED
Sbjct: 72 FTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGSFTQED 131
Query: 130 EEEILAE 136
E+ IL E
Sbjct: 132 EDAILEE 138
>TAIR|locus:2119956 [details] [associations]
symbol:SNF7.1 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR005024
Pfam:PF03357 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL078470
EMBL:AL161574 GO:GO:0015031 GO:GO:0000815 eggNOG:NOG291419
KO:K12194 HOGENOM:HOG000209960 EMBL:AY042853 EMBL:AY072490
EMBL:AY088519 IPI:IPI00528225 IPI:IPI00548294 PIR:T08971
RefSeq:NP_001078468.1 RefSeq:NP_194645.1 RefSeq:NP_974635.1
UniGene:At.3412 ProteinModelPortal:Q9SZE4 SMR:Q9SZE4 IntAct:Q9SZE4
STRING:Q9SZE4 PaxDb:Q9SZE4 PRIDE:Q9SZE4 EnsemblPlants:AT4G29160.1
EnsemblPlants:AT4G29160.3 GeneID:829037 KEGG:ath:AT4G29160
TAIR:At4g29160 InParanoid:Q9SZE4 OMA:DEINENM PhylomeDB:Q9SZE4
ProtClustDB:CLSN2685332 Genevestigator:Q9SZE4 Uniprot:Q9SZE4
Length = 219
Score = 127 (49.8 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 28/88 (31%), Positives = 47/88 (53%)
Query: 59 INVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEIN 118
+ + Q+ +E A ++L+SG +A+KA+Q N++DV K MD+ E +I
Sbjct: 81 LRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQ 140
Query: 119 AILGEKLSAE---DEEEILAEFDNLEAQ 143
L + A DE+E+ AE D LE++
Sbjct: 141 EALATPMGAAADFDEDELAAELDELESE 168
>UNIPROTKB|I3L4G8 [details] [associations]
symbol:CHMP6 "Charged multivesicular body protein 6"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
HGNC:HGNC:25675 EMBL:AC127496 Ensembl:ENST00000571457 Bgee:I3L4G8
Uniprot:I3L4G8
Length = 173
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 60 NVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINA 119
++E + IE + V E L+ G + + +++E+V++++D+T+EA YQ +I+
Sbjct: 41 SLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDE 100
Query: 120 ILGEKLSAEDEEEILAE 136
+L + EDE+ IL E
Sbjct: 101 LLAGSFTQEDEDAILEE 117
>POMBASE|SPAC1142.07c [details] [associations]
symbol:vps32 "ESCRT III complex subunit Vps32"
species:4896 "Schizosaccharomyces pombe" [GO:0000815 "ESCRT III
complex" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006900
"membrane budding" evidence=IC] [GO:0043328 "protein targeting to
vacuole involved in ubiquitin-dependent protein catabolic process
via the multivesicular body sorting pathway" evidence=IMP]
[GO:0045324 "late endosome to vacuole transport" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 PomBase:SPAC1142.07c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0000815 GO:GO:0043328
eggNOG:NOG291419 KO:K12194 OMA:MKELEAW HOGENOM:HOG000209960
GO:GO:0006900 OrthoDB:EOG4TMVBN RefSeq:NP_594271.1
ProteinModelPortal:Q9P7F7 MINT:MINT-468312 STRING:Q9P7F7
EnsemblFungi:SPAC1142.07c.1 GeneID:2542922 KEGG:spo:SPAC1142.07c
NextBio:20803958 Uniprot:Q9P7F7
Length = 222
Score = 121 (47.7 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 27/91 (29%), Positives = 53/91 (58%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
++G N+EQQL I+ A+ ++++ G A+K+IQ ++ + V ++MD + +
Sbjct: 77 IEGSRNNIEQQLFSIQNANLNFETLQAMRQGAEAMKSIQRGMDADKVDQIMDKIRDQQTI 136
Query: 114 QDEINAILGEK--LSAE-DEEEILAEFDNLE 141
+EI+ ++ L+AE DE+E+ E D L+
Sbjct: 137 SEEISTMISTPVGLNAEIDEDELANELDELQ 167
>TAIR|locus:2051970 [details] [associations]
symbol:SNF7.2 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031
EMBL:AC005169 GO:GO:0000815 eggNOG:NOG291419 KO:K12194 OMA:MKELEAW
HOGENOM:HOG000209960 EMBL:AY045911 EMBL:AY079421 IPI:IPI00526112
PIR:F84581 RefSeq:NP_179573.1 UniGene:At.20997
ProteinModelPortal:O82197 SMR:O82197 IntAct:O82197 STRING:O82197
PaxDb:O82197 PRIDE:O82197 EnsemblPlants:AT2G19830.1 GeneID:816502
KEGG:ath:AT2G19830 TAIR:At2g19830 InParanoid:O82197
PhylomeDB:O82197 Genevestigator:O82197 Uniprot:O82197
Length = 213
Score = 120 (47.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 59 INVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEIN 118
+ + Q+ +E A ++L++G +A+KA+Q N++DV K MD+ E +I
Sbjct: 82 LRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQ 141
Query: 119 AILGEKLSAED--EEEILAEFDNLE 141
L A D E+E+ AE D LE
Sbjct: 142 EALSAPFGANDFDEDELEAELDELE 166
>UNIPROTKB|I3L3E4 [details] [associations]
symbol:CHMP6 "Charged multivesicular body protein 6"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
HGNC:HGNC:25675 EMBL:AC127496 Ensembl:ENST00000572525 Bgee:I3L3E4
Uniprot:I3L3E4
Length = 113
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 68 IELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSA 127
IE + V E L+ G + + +++E+V++++D+T+EA YQ +I+ +L +
Sbjct: 5 IEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGSFTQ 64
Query: 128 EDEEEILAE 136
EDE+ IL E
Sbjct: 65 EDEDAILEE 73
>ZFIN|ZDB-GENE-050417-389 [details] [associations]
symbol:chmp4c "chromatin modifying protein 4C"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR005024
Pfam:PF03357 ZFIN:ZDB-GENE-050417-389 GO:GO:0015031
eggNOG:NOG291419 HOVERGEN:HBG050928 HOGENOM:HOG000209959 KO:K12194
CTD:92421 EMBL:BC092770 IPI:IPI00506306 RefSeq:NP_001017844.1
UniGene:Dr.84820 ProteinModelPortal:Q568Q1 STRING:Q568Q1
GeneID:550542 KEGG:dre:550542 InParanoid:Q568Q1 OrthoDB:EOG4ZCT5Z
NextBio:20879783 ArrayExpress:Q568Q1 Uniprot:Q568Q1
Length = 239
Score = 118 (46.6 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E A+ V +++ AIK + +I+L+ + LM D E +
Sbjct: 100 IDGTLSTIEFQRESLENATTNTEVLKNMGYAAKAIKGVHEKIDLDKIDSLMQDITEQQEV 159
Query: 114 QDEINAILGEKLSAE-DEEEILAEFDNLEAQ 143
EI+ + + + DE+E+LAE LE +
Sbjct: 160 AQEISDAISKPFGDQFDEDELLAELAELEQE 190
>CGD|CAL0005125 [details] [associations]
symbol:SNF7 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0016485 "protein processing"
evidence=IGI;IMP] [GO:0006623 "protein targeting to vacuole"
evidence=ISS;IMP] [GO:0000815 "ESCRT III complex" evidence=ISS;IDA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0036178 "filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0007165 "signal transduction" evidence=IGI]
[GO:0045324 "late endosome to vacuole transport" evidence=IMP]
[GO:0036177 "filamentous growth of a population of unicellular
organisms in response to pH" evidence=IMP] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0071285 "cellular response to lithium ion"
evidence=IMP] [GO:0071467 "cellular response to pH"
evidence=IGI;IMP] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0070676 "intralumenal vesicle formation" evidence=IEA]
[GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0071454
"cellular response to anoxia" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 CGD:CAL0005125 GO:GO:0007165 GO:GO:0036178
GO:GO:0009405 GO:GO:0035690 GO:GO:0031505 EMBL:AACQ01000036
EMBL:AACQ01000035 GO:GO:0016485 GO:GO:0006623 GO:GO:0045324
GO:GO:0000815 GO:GO:0071285 GO:GO:0071467 eggNOG:NOG291419
KO:K12194 RefSeq:XP_718900.1 RefSeq:XP_719002.1
ProteinModelPortal:Q5ABD0 STRING:Q5ABD0 GeneID:3639377
GeneID:3639478 KEGG:cal:CaO19.13461 KEGG:cal:CaO19.6040
Uniprot:Q5ABD0
Length = 226
Score = 114 (45.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/132 (24%), Positives = 55/132 (41%)
Query: 14 LDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASK 73
L ++ + Q AR + V+ + +E QL IE A+
Sbjct: 38 LQQQMDDQDQLARKYVSSKQTTLAKSALKRKKGYESNLLKVENQIETLETQLISIEGANL 97
Query: 74 QKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAE--DEE 131
+++K G A+K I E +++ V+ MD+ E DEI+ + + E DE+
Sbjct: 98 NLETMKAMKQGAKAMKQIHGEYDVDKVEDTMDEIREQVELADEISEAISRPVGNEFVDED 157
Query: 132 EILAEFDNLEAQ 143
E+ E LEA+
Sbjct: 158 ELDEELKELEAE 169
>UNIPROTKB|Q5ABD0 [details] [associations]
symbol:SNF7 "Vacuolar-sorting protein SNF7" species:237561
"Candida albicans SC5314" [GO:0000815 "ESCRT III complex"
evidence=ISS;IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006623 "protein targeting to vacuole" evidence=ISS;IMP]
[GO:0007165 "signal transduction" evidence=IGI] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016485 "protein processing"
evidence=IGI;IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0031505 "fungal-type cell wall organization" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036177
"filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] [GO:0036178 "filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0045324 "late endosome to
vacuole transport" evidence=IMP] [GO:0071285 "cellular response to
lithium ion" evidence=IMP] [GO:0071467 "cellular response to pH"
evidence=IGI;IMP] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0005125
GO:GO:0007165 GO:GO:0036178 GO:GO:0009405 GO:GO:0035690
GO:GO:0031505 EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0016485
GO:GO:0006623 GO:GO:0045324 GO:GO:0000815 GO:GO:0071285
GO:GO:0071467 eggNOG:NOG291419 KO:K12194 RefSeq:XP_718900.1
RefSeq:XP_719002.1 ProteinModelPortal:Q5ABD0 STRING:Q5ABD0
GeneID:3639377 GeneID:3639478 KEGG:cal:CaO19.13461
KEGG:cal:CaO19.6040 Uniprot:Q5ABD0
Length = 226
Score = 114 (45.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/132 (24%), Positives = 55/132 (41%)
Query: 14 LDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASK 73
L ++ + Q AR + V+ + +E QL IE A+
Sbjct: 38 LQQQMDDQDQLARKYVSSKQTTLAKSALKRKKGYESNLLKVENQIETLETQLISIEGANL 97
Query: 74 QKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAE--DEE 131
+++K G A+K I E +++ V+ MD+ E DEI+ + + E DE+
Sbjct: 98 NLETMKAMKQGAKAMKQIHGEYDVDKVEDTMDEIREQVELADEISEAISRPVGNEFVDED 157
Query: 132 EILAEFDNLEAQ 143
E+ E LEA+
Sbjct: 158 ELDEELKELEAE 169
>UNIPROTKB|Q5ZHP5 [details] [associations]
symbol:CHMP4B "Charged multivesicular body protein 4b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:NOG291419
HOVERGEN:HBG050928 OrthoDB:EOG49GKHS GeneTree:ENSGT00390000005006
HOGENOM:HOG000209959 KO:K12194 EMBL:AJ721089 IPI:IPI00582041
RefSeq:NP_001006286.1 UniGene:Gga.1495 ProteinModelPortal:Q5ZHP5
IntAct:Q5ZHP5 STRING:Q5ZHP5 PRIDE:Q5ZHP5 Ensembl:ENSGALT00000003268
GeneID:419150 KEGG:gga:419150 CTD:128866 InParanoid:Q5ZHP5
OMA:MKELEAW NextBio:20822253 Uniprot:Q5ZHP5
Length = 227
Score = 114 (45.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 27/93 (29%), Positives = 50/93 (53%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E A+ V +++ A+KA ++++ V +LM D E +
Sbjct: 84 IDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHDNMDIDKVDELMQDIAEQQEL 143
Query: 114 QDEINAILGEKLS-AE--DEEEILAEFDNLEAQ 143
DEI+ + + + E DE+E++AE + LE +
Sbjct: 144 ADEISTAISKPVGFGEEFDEDELMAELEELEQE 176
>FB|FBgn0086656 [details] [associations]
symbol:shrb "shrub" species:7227 "Drosophila melanogaster"
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0015031
"protein transport" evidence=IEA] [GO:0044130 "negative regulation
of growth of symbiont in host" evidence=IMP] [GO:0048812 "neuron
projection morphogenesis" evidence=IMP] InterPro:IPR005024
Pfam:PF03357 EMBL:AE013599 GO:GO:0015031 GO:GO:0048813
GO:GO:0044130 eggNOG:NOG291419 GeneTree:ENSGT00390000005006
KO:K12194 OMA:MKELEAW EMBL:AY069131 RefSeq:NP_610462.3
UniGene:Dm.2267 SMR:Q8T0Q4 IntAct:Q8T0Q4 MINT:MINT-896346
STRING:Q8T0Q4 EnsemblMetazoa:FBtr0088623 GeneID:35933
KEGG:dme:Dmel_CG8055 UCSC:CG8055-RA CTD:35933 FlyBase:FBgn0086656
InParanoid:Q8T0Q4 OrthoDB:EOG4SBCFD ChiTaRS:shrb GenomeRNAi:35933
NextBio:795919 Uniprot:Q8T0Q4
Length = 226
Score = 113 (44.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 27/95 (28%), Positives = 51/95 (53%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E A+ AV ++K+ +A+K ++++ V +MDD E +
Sbjct: 78 IDGTLSTIEMQREALESANTNTAVLTTMKNAADALKRAHQNMDVDKVHDMMDDIAEQQDV 137
Query: 114 QDEINAILGEKLS--AE-DEEEILAEFDNLEAQVF 145
EI+ + ++ A+ D+E++ E D LE + F
Sbjct: 138 AREISDAISNPVAFGADLDDEDLERELDELEQENF 172
>UNIPROTKB|P59074 [details] [associations]
symbol:CGI-301 "Putative protein CGI-301" species:9606
"Homo sapiens" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031 EMBL:AF531436
EMBL:AL834124 IPI:IPI00171424 ProteinModelPortal:P59074 SMR:P59074
STRING:P59074 DMDM:24638418 PaxDb:P59074 PRIDE:P59074
neXtProt:NX_P59074 eggNOG:NOG291419 HOVERGEN:HBG050928
InParanoid:P59074 OrthoDB:EOG49GKHS ArrayExpress:P59074
Genevestigator:P59074 GermOnline:ENSG00000101421 Uniprot:P59074
Length = 171
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/93 (26%), Positives = 49/93 (52%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E A+ V +++ S A KA ++++ V +LM D + +
Sbjct: 42 IDGTLSTIEFQQQALENANTNTEVLKNMGSAAKAKKAAHDNMDIDKVDELMQDIADQQEL 101
Query: 114 QDEINAILGEKLS---AEDEEEILAEFDNLEAQ 143
+EI+ + + + DE+E++AE + LE +
Sbjct: 102 GEEISTAISKPVGFGEKSDEDELMAELEELEQE 134
>SGD|S000004015 [details] [associations]
symbol:SNF7 "Subunit of the ESCRT-III complex" species:4932
"Saccharomyces cerevisiae" [GO:0045324 "late endosome to vacuole
transport" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000815 "ESCRT III complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IC] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0071454 "cellular response
to anoxia" evidence=IMP] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0005768 "endosome" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 SGD:S000004015 GO:GO:0015031
EMBL:BK006945 GO:GO:0045324 GO:GO:0000815 eggNOG:NOG291419
GeneTree:ENSGT00390000005006 KO:K12194 HOGENOM:HOG000209960
GO:GO:0071454 GO:GO:0043162 GO:GO:0070676 OrthoDB:EOG4TMVBN
EMBL:L09751 EMBL:Z73197 EMBL:AY558202 PIR:S52590 RefSeq:NP_013125.1
ProteinModelPortal:P39929 SMR:P39929 DIP:DIP-1747N IntAct:P39929
MINT:MINT-389266 STRING:P39929 PaxDb:P39929 PeptideAtlas:P39929
EnsemblFungi:YLR025W GeneID:850712 KEGG:sce:YLR025W CYGD:YLR025w
OMA:DSLMQDI NextBio:966772 Genevestigator:P39929 GermOnline:YLR025W
Uniprot:P39929
Length = 240
Score = 110 (43.8 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
V+G + ++EQQL IE A+ +++ G A+K I S ++++ V + MD+ E
Sbjct: 80 VEGTMESMEQQLFSIESANLNLETMRAMQEGAKAMKTIHSGLDIDKVDETMDEIREQVEL 139
Query: 114 QDEINAILGEKL----SAEDEEEILAEFDNL 140
DEI+ + L + DE+E+ E D L
Sbjct: 140 GDEISDAISRPLITGANEVDEDELDEELDML 170
>WB|WBGene00016497 [details] [associations]
symbol:vps-32.2 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0032940 GO:GO:0015031 GO:GO:0018996 GO:GO:0040011
eggNOG:NOG291419 GeneTree:ENSGT00390000005006 HOGENOM:HOG000209959
KO:K12194 EMBL:FO080808 RefSeq:NP_505022.2 UniGene:Cel.26024
ProteinModelPortal:Q22916 SMR:Q22916 STRING:Q22916
EnsemblMetazoa:C37C3.3 GeneID:183288 KEGG:cel:CELE_C37C3.3
UCSC:C37C3.3 CTD:183288 WormBase:C37C3.3 InParanoid:Q22916
OMA:QIHGEYN NextBio:920584 Uniprot:Q22916
Length = 217
Score = 108 (43.1 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 28/92 (30%), Positives = 51/92 (55%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E AS V +K ++A+KA+ + ++ + V+ +MD+ +E +
Sbjct: 80 IDGVLATLEHQRETLENASTNAEVLTVMKLASDALKAVHNNMDSDQVRDMMDNIDEQREV 139
Query: 114 QDEI-NAILGEKLS-AEDEEEILAEFDNLEAQ 143
EI +AI + A DE ++L E +LE +
Sbjct: 140 AKEIADAISNPGFNNAIDEADLLRELVDLEQE 171
>UNIPROTKB|Q08E32 [details] [associations]
symbol:CHMP4B "CHMP4B protein" species:9913 "Bos taurus"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 eggNOG:NOG291419 HOVERGEN:HBG050928
OrthoDB:EOG49GKHS GeneTree:ENSGT00390000005006 HOGENOM:HOG000209959
KO:K12194 CTD:128866 OMA:MKELEAW EMBL:DAAA02036490
EMBL:DAAA02036491 EMBL:DAAA02036492 EMBL:BC123447 IPI:IPI00688280
RefSeq:NP_001121978.1 UniGene:Bt.3621 STRING:Q08E32
Ensembl:ENSBTAT00000017812 GeneID:616164 KEGG:bta:616164
InParanoid:Q08E32 NextBio:20899993 Uniprot:Q08E32
Length = 224
Score = 107 (42.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 25/93 (26%), Positives = 50/93 (53%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E A+ V +++ A+KA ++++ V +LM D + +
Sbjct: 82 IDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQEL 141
Query: 114 QDEINAILGEKLS-AE--DEEEILAEFDNLEAQ 143
+EI+ + + + E DE+E++AE + LE +
Sbjct: 142 AEEISTAISKPVGFGEEFDEDELMAELEELEQE 174
>UNIPROTKB|E2RDX2 [details] [associations]
symbol:CHMP4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00390000005006 KO:K12194 CTD:128866 OMA:MKELEAW
EMBL:AAEX03013900 RefSeq:XP_542966.1 ProteinModelPortal:E2RDX2
Ensembl:ENSCAFT00000011977 GeneID:485842 KEGG:cfa:485842
NextBio:20859747 Uniprot:E2RDX2
Length = 224
Score = 107 (42.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 25/93 (26%), Positives = 50/93 (53%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E A+ V +++ A+KA ++++ V +LM D + +
Sbjct: 82 IDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQEL 141
Query: 114 QDEINAILGEKLS-AE--DEEEILAEFDNLEAQ 143
+EI+ + + + E DE+E++AE + LE +
Sbjct: 142 AEEISTAISKPVGFGEEFDEDELMAELEELEQE 174
>UNIPROTKB|Q9H444 [details] [associations]
symbol:CHMP4B "Charged multivesicular body protein 4b"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
EMBL:CH471077 GO:GO:0031902 GO:GO:0015031 GO:GO:0016197
GO:GO:0016044 PDB:3UM3 PDBsum:3UM3 HOVERGEN:HBG050928
OrthoDB:EOG49GKHS GermOnline:ENSG00000101421 KO:K12194 CTD:128866
OMA:MKELEAW HOGENOM:HOG000209960 EMBL:AB100261 EMBL:AY329085
EMBL:AL050349 EMBL:BC033859 IPI:IPI00025974 RefSeq:NP_789782.1
UniGene:Hs.472471 PDB:3C3Q PDB:4ABM PDBsum:3C3Q PDBsum:4ABM
ProteinModelPortal:Q9H444 SMR:Q9H444 DIP:DIP-29924N IntAct:Q9H444
MINT:MINT-5000054 STRING:Q9H444 PhosphoSite:Q9H444 DMDM:24636296
PeptideAtlas:Q9H444 PRIDE:Q9H444 Ensembl:ENST00000217402
GeneID:128866 KEGG:hsa:128866 UCSC:uc002xaa.3 GeneCards:GC20P032399
HGNC:HGNC:16171 HPA:HPA041401 MIM:605387 MIM:610897
neXtProt:NX_Q9H444 Orphanet:98993 PharmGKB:PA25721
InParanoid:Q9H444 PhylomeDB:Q9H444 ChiTaRS:CHMP4B
EvolutionaryTrace:Q9H444 GenomeRNAi:128866 NextBio:82502
ArrayExpress:Q9H444 Bgee:Q9H444 CleanEx:HS_CHMP4B
Genevestigator:Q9H444 Uniprot:Q9H444
Length = 224
Score = 107 (42.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 25/93 (26%), Positives = 50/93 (53%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E A+ V +++ A+KA ++++ V +LM D + +
Sbjct: 82 IDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQEL 141
Query: 114 QDEINAILGEKLS-AE--DEEEILAEFDNLEAQ 143
+EI+ + + + E DE+E++AE + LE +
Sbjct: 142 AEEISTAISKPVGFGEEFDEDELMAELEELEQE 174
>UNIPROTKB|F1S4Z2 [details] [associations]
symbol:CHMP4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00390000005006 KO:K12194 OMA:MKELEAW
EMBL:AEMK01197293 EMBL:CU407167 RefSeq:XP_003134450.3
Ensembl:ENSSSCT00000007957 GeneID:100516767 KEGG:ssc:100516767
Uniprot:F1S4Z2
Length = 224
Score = 107 (42.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 25/93 (26%), Positives = 50/93 (53%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E A+ V +++ A+KA ++++ V +LM D + +
Sbjct: 82 IDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQEL 141
Query: 114 QDEINAILGEKLS-AE--DEEEILAEFDNLEAQ 143
+EI+ + + + E DE+E++AE + LE +
Sbjct: 142 AEEISTAISKPVGFGEEFDEDELMAELEELEQE 174
>MGI|MGI:1922858 [details] [associations]
symbol:Chmp4b "charged multivesicular body protein 4B"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 MGI:MGI:1922858 GO:GO:0005829 GO:GO:0031902
GO:GO:0015031 eggNOG:NOG291419 HOVERGEN:HBG050928 OrthoDB:EOG49GKHS
GeneTree:ENSGT00390000005006 KO:K12194 CTD:128866 OMA:MKELEAW
HOGENOM:HOG000209960 ChiTaRS:CHMP4B EMBL:AK008205 EMBL:AK156473
EMBL:AK159193 EMBL:AL929557 EMBL:BC006905 EMBL:BC011429
EMBL:BC059279 IPI:IPI00171974 RefSeq:NP_083638.1 UniGene:Mm.262480
ProteinModelPortal:Q9D8B3 SMR:Q9D8B3 STRING:Q9D8B3
PhosphoSite:Q9D8B3 PaxDb:Q9D8B3 PRIDE:Q9D8B3
Ensembl:ENSMUST00000044277 GeneID:75608 KEGG:mmu:75608
UCSC:uc008njp.1 InParanoid:A2AVM1 NextBio:343498 Bgee:Q9D8B3
CleanEx:MM_CHMP4B Genevestigator:Q9D8B3
GermOnline:ENSMUSG00000038467 Uniprot:Q9D8B3
Length = 224
Score = 107 (42.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 25/93 (26%), Positives = 50/93 (53%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E A+ V +++ A+KA ++++ V +LM D + +
Sbjct: 82 IDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQEL 141
Query: 114 QDEINAILGEKLS-AE--DEEEILAEFDNLEAQ 143
+EI+ + + + E DE+E++AE + LE +
Sbjct: 142 AEEISTAISKPVGFGEEFDEDELMAELEELEQE 174
>RGD|1564543 [details] [associations]
symbol:Chmp4c "charged multivesicular body protein 4C"
species:10116 "Rattus norvegicus" [GO:0005829 "cytosol"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 RGD:1564543 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 eggNOG:NOG291419 HOVERGEN:HBG050928
OrthoDB:EOG49GKHS HOGENOM:HOG000209959 KO:K12194 CTD:92421
EMBL:BC092576 IPI:IPI00209669 RefSeq:NP_001017466.2
UniGene:Rn.162567 ProteinModelPortal:Q569C1 STRING:Q569C1
PRIDE:Q569C1 GeneID:361916 KEGG:rno:361916 UCSC:RGD:1564543
InParanoid:Q569C1 NextBio:678036 ArrayExpress:Q569C1
Genevestigator:Q569C1 GermOnline:ENSRNOG00000010238 Uniprot:Q569C1
Length = 232
Score = 106 (42.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E + V ++ A+KA+ ++L + LM D E +
Sbjct: 82 IDGTLSTIEFQREALENSHTNTEVLRNMGFAAKAMKAVHENMDLNKIDDLMQDITEQQDI 141
Query: 114 QDEINAILGEKLS-AE--DEEEILAEFDNLEAQ 143
EI+ +++ A+ DE+E+LAE + LE +
Sbjct: 142 AQEISEAFSQRVQFADGFDEDELLAELEELEQE 174
>ZFIN|ZDB-GENE-040426-906 [details] [associations]
symbol:zgc:56112 "zgc:56112" species:7955 "Danio
rerio" [GO:0015031 "protein transport" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late endosome
membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-040426-906 GO:GO:0005829 GO:GO:0031902 GO:GO:0015031
eggNOG:NOG291419 HOVERGEN:HBG050928 OrthoDB:EOG49GKHS KO:K12194
EMBL:BC045919 IPI:IPI00499940 RefSeq:NP_956489.1 UniGene:Dr.935
ProteinModelPortal:Q7ZVC4 STRING:Q7ZVC4 GeneID:393164
KEGG:dre:393164 HOGENOM:HOG000209960 NextBio:20814234
ArrayExpress:Q7ZVC4 Uniprot:Q7ZVC4
Length = 220
Score = 105 (42.0 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E A V +++ A+KA ++++ V +LM D E +
Sbjct: 80 IDGTLSTIEFQREALENAHTNTEVIKNMGYAAKAMKAAHDNMDIDKVDELMQDIIEQQEL 139
Query: 114 QDEINAILGEKLS-AE--DEEEILAEFDNLEAQVFAYIQFELAHN 155
EI+ + + + E DE+E+LAE + LE + E+ N
Sbjct: 140 AQEISDAISKPVGFGEEFDEDELLAELEELEQEELDKNLLEIGDN 184
>UNIPROTKB|I3LG19 [details] [associations]
symbol:CHMP4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00390000005006 EMBL:CU633211
Ensembl:ENSSSCT00000031697 OMA:SSTNTEV Uniprot:I3LG19
Length = 181
Score = 102 (41.0 bits), Expect = 0.00013, P = 0.00013
Identities = 24/93 (25%), Positives = 48/93 (51%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E + V +++ A+KA+ ++L + LM + E +
Sbjct: 26 IDGTLSTIEFQREALENSHTNTEVLKNMGMAAKAMKAVHENMDLNKIDDLMQEITEQQDI 85
Query: 114 QDEINAILGEKLS--AE-DEEEILAEFDNLEAQ 143
EI+ +++ A+ DE+E++AE + LE +
Sbjct: 86 AQEISEAFSQRVGFGADFDEDELMAELEELEQE 118
>MGI|MGI:1913621 [details] [associations]
symbol:Chmp4c "charged multivesicular body protein 4C"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 MGI:MGI:1913621 GO:GO:0005829 GO:GO:0031902
GO:GO:0015031 eggNOG:NOG291419 HOVERGEN:HBG050928 OrthoDB:EOG49GKHS
GeneTree:ENSGT00390000005006 HOGENOM:HOG000209959 KO:K12194
CTD:92421 OMA:KFFKGGG EMBL:AK009273 EMBL:AK010707 EMBL:AK160189
EMBL:BC115983 EMBL:BC117538 IPI:IPI00317752 RefSeq:NP_079795.1
UniGene:Mm.366147 UniGene:Mm.440046 ProteinModelPortal:Q9D7F7
SMR:Q9D7F7 STRING:Q9D7F7 PhosphoSite:Q9D7F7 PaxDb:Q9D7F7
PRIDE:Q9D7F7 Ensembl:ENSMUST00000029049 GeneID:66371 KEGG:mmu:66371
UCSC:uc008opu.1 InParanoid:Q149R2 ChiTaRS:CHMP4C NextBio:321473
Bgee:Q9D7F7 CleanEx:MM_CHMP4C Genevestigator:Q9D7F7
GermOnline:ENSMUSG00000027536 Uniprot:Q9D7F7
Length = 232
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
VDG L +E Q +E + V ++ A+KA+ ++L + LM D E +
Sbjct: 82 VDGTLSTIEFQREALENSHTNTEVLRNMGFAAKAMKAVHDNMDLNKIDDLMQDITEQQDI 141
Query: 114 QDEINAILGEKLS-AE--DEEEILAEFDNLEAQ 143
EI+ +++ A+ DE E+LAE + LE +
Sbjct: 142 AQEISEAFSQRVQFADGFDEAELLAELEELEQE 174
>DICTYBASE|DDB_G0277133 [details] [associations]
symbol:DDB_G0277133 "SNF7 family protein"
species:44689 "Dictyostelium discoideum" [GO:0015031 "protein
transport" evidence=IEA] [GO:0045324 "late endosome to vacuole
transport" evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0277133 GO:GO:0008565 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 GO:GO:0045324 GO:GO:0000815 eggNOG:NOG272120
KO:K15053 RefSeq:XP_642803.1 ProteinModelPortal:Q86K93 PRIDE:Q86K93
EnsemblProtists:DDB0266400 GeneID:8620866 KEGG:ddi:DDB_G0277133
OMA:MAKTYLR ProtClustDB:CLSZ2729144 Uniprot:Q86K93
Length = 477
Score = 105 (42.0 bits), Expect = 0.00028, P = 0.00028
Identities = 27/89 (30%), Positives = 49/89 (55%)
Query: 60 NVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINA 119
N+ + L IE A + + ESL +G + +K + EI+++ V ++DD ++A Q EI+
Sbjct: 313 NIHEILFSIESAKSNQQIIESLCTGVSTLKKVNQEISVDQVDSILDDYQDAITNQREIDD 372
Query: 120 IL--G----EKLSAED--EEEILAEFDNL 140
+ G E LS+ D E+++ E D +
Sbjct: 373 AMKSGFNSVESLSSADIDEDQLEKELDQM 401
>WB|WBGene00020025 [details] [associations]
symbol:R12C12.5 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 eggNOG:NOG291419
GeneTree:ENSGT00390000005006 KO:K12194 HOGENOM:HOG000209960
EMBL:FO081545 PIR:T16731 RefSeq:NP_495206.2
ProteinModelPortal:Q21959 SMR:Q21959 STRING:Q21959 PaxDb:Q21959
EnsemblMetazoa:R12C12.5 GeneID:174010 KEGG:cel:CELE_R12C12.5
UCSC:R12C12.5 CTD:174010 WormBase:R12C12.5 InParanoid:Q21959
OMA:INDNMEN NextBio:882111 Uniprot:Q21959
Length = 236
Score = 102 (41.0 bits), Expect = 0.00030, P = 0.00030
Identities = 23/92 (25%), Positives = 44/92 (47%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E V + L T +K ++++++ V LMD+ + A
Sbjct: 96 IDGVLTKLEAQRTALENVGMHNEVIDVLGKTTETLKKEHAKMDIDKVHDLMDEIADGLAM 155
Query: 114 QDEINAILGEKLS-AEDEEEILAEFDNLEAQV 144
+E+N + + DE+E++ E L+ V
Sbjct: 156 SEELNEAISAPIGDVADEDELMQELQELQDNV 187
>POMBASE|SPCC162.06c [details] [associations]
symbol:SPCC162.06c "vacuolar sorting protein Vps60
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000329
"fungal-type vacuole membrane" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0006886 "intracellular
protein transport" evidence=IC] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=ISO] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IC]
InterPro:IPR005024 Pfam:PF03357 PomBase:SPCC162.06c GO:GO:0006886
EMBL:CU329672 GO:GO:0000329 eggNOG:NOG300000 HOGENOM:HOG000191086
KO:K12198 OMA:NQSFNME GO:GO:0032511 GO:GO:0043162 OrthoDB:EOG44J5TG
PIR:T41025 RefSeq:NP_588238.1 ProteinModelPortal:O74422
STRING:O74422 EnsemblFungi:SPCC162.06c.1 GeneID:2538774
KEGG:spo:SPCC162.06c NextBio:20799957 Uniprot:O74422
Length = 210
Score = 99 (39.9 bits), Expect = 0.00070, P = 0.00070
Identities = 21/86 (24%), Positives = 45/86 (52%)
Query: 60 NVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINA 119
N+EQ E A ++++ +K+ +++E ++KL D+ ++ E+N
Sbjct: 88 NMEQAAMTTESLKNTMATVQTMQETARQLKSQSKNVSIEKIEKLQDEIQDYMDAAGELNE 147
Query: 120 ILGEKLSA--EDEEEILAEFDNLEAQ 143
+LG+ ++ DEEE+ AE + L+ +
Sbjct: 148 VLGQNMTDINVDEEELDAELEALQQE 173
>ZFIN|ZDB-GENE-040426-2812 [details] [associations]
symbol:chmp4b "chromatin modifying protein 4B"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-2812
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:NOG291419
HOVERGEN:HBG050928 OrthoDB:EOG49GKHS GeneTree:ENSGT00390000005006
KO:K12194 CTD:128866 HOGENOM:HOG000209960 EMBL:BC044191
EMBL:BC071537 IPI:IPI00504193 RefSeq:NP_998622.1 UniGene:Dr.16859
ProteinModelPortal:Q6IQ73 STRING:Q6IQ73 PRIDE:Q6IQ73
Ensembl:ENSDART00000015193 GeneID:406766 KEGG:dre:406766
InParanoid:Q6IQ73 OMA:TISTIEF NextBio:20818281 ArrayExpress:Q6IQ73
Bgee:Q6IQ73 Uniprot:Q6IQ73
Length = 224
Score = 99 (39.9 bits), Expect = 0.00083, P = 0.00083
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 54 VDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAY 113
+DG L +E Q +E A+ V +++ A+K ++++ V LM D E +
Sbjct: 80 IDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKTAHENMDIDKVDDLMQDITEQQEL 139
Query: 114 QDEINAILGEKLS-AE--DEEEILAEFDNLEAQ 143
EI+ + + E DE+E++AE + LE +
Sbjct: 140 AQEISDAISRPVGFGEEFDEDELMAELEELEQE 172
>UNIPROTKB|P0C149 [details] [associations]
symbol:SNF7 "Vacuolar-sorting protein SNF7" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031 GO:GO:0010008
EMBL:CM001236 eggNOG:NOG291419 KO:K12194 OrthoDB:EOG4TMVBN
RefSeq:XP_003719742.1 ProteinModelPortal:P0C149 STRING:P0C149
EnsemblFungi:MGG_04095T0 GeneID:2677595 KEGG:mgr:MGG_04095
Uniprot:P0C149
Length = 226
Score = 99 (39.9 bits), Expect = 0.00085, P = 0.00085
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 61 VEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEI-NA 119
+EQQ+ IE A+ E++K A++ I ++ +E V + MD E A +EI NA
Sbjct: 87 LEQQINAIESANINMETLEAMKKAGKAMEDIHGKLTVEKVDETMDKLREQNALSEEIVNA 146
Query: 120 ILGEKLSAEDEEEILAEFDNLEA 142
I +L E ++ E D LEA
Sbjct: 147 ITNNQLGNEAIDDADLE-DELEA 168
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.355 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 172 148 0.00068 104 3 11 22 0.49 31
30 0.39 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 47
No. of states in DFA: 532 (57 KB)
Total size of DFA: 116 KB (2077 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.75u 0.13s 19.88t Elapsed: 00:00:00
Total cpu time: 19.75u 0.13s 19.88t Elapsed: 00:00:00
Start: Thu May 9 18:19:22 2013 End: Thu May 9 18:19:22 2013