Query 030733
Match_columns 172
No_of_seqs 230 out of 1361
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 05:26:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030733.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030733hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hdj_A Human HSP40, HDJ-1; mol 99.9 2.6E-22 9E-27 135.5 7.8 69 61-132 2-70 (77)
2 2ctr_A DNAJ homolog subfamily 99.9 2.6E-22 9.1E-27 138.9 7.9 72 61-135 6-77 (88)
3 2dmx_A DNAJ homolog subfamily 99.9 5.7E-22 2E-26 138.2 7.3 70 61-131 8-77 (92)
4 2yua_A Williams-beuren syndrom 99.9 2.6E-22 8.8E-27 141.9 5.5 69 61-131 16-84 (99)
5 2o37_A Protein SIS1; HSP40, J- 99.9 7.8E-22 2.7E-26 137.7 7.2 71 61-136 7-77 (92)
6 2ctp_A DNAJ homolog subfamily 99.8 8.8E-22 3E-26 133.2 6.3 68 61-131 6-73 (78)
7 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.3E-21 4.3E-26 135.5 7.1 70 59-131 14-83 (88)
8 1wjz_A 1700030A21RIK protein; 99.8 5.8E-22 2E-26 138.4 5.4 71 61-131 15-89 (94)
9 2dn9_A DNAJ homolog subfamily 99.8 8.9E-22 3.1E-26 133.4 5.9 69 61-131 6-74 (79)
10 2ctq_A DNAJ homolog subfamily 99.8 2.9E-21 1E-25 139.4 8.7 72 60-133 18-89 (112)
11 2ej7_A HCG3 gene; HCG3 protein 99.8 3.3E-21 1.1E-25 131.5 7.3 70 61-131 8-77 (82)
12 2lgw_A DNAJ homolog subfamily 99.8 3.6E-21 1.2E-25 136.2 7.5 71 62-133 2-72 (99)
13 2ctw_A DNAJ homolog subfamily 99.8 8.8E-21 3E-25 136.3 9.0 72 58-131 13-84 (109)
14 2och_A Hypothetical protein DN 99.8 8.1E-21 2.8E-25 126.9 7.4 65 61-130 7-71 (73)
15 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 8.2E-21 2.8E-25 136.2 5.1 72 60-131 13-86 (109)
16 1bq0_A DNAJ, HSP40; chaperone, 99.8 3E-21 1E-25 137.2 2.6 71 61-133 2-72 (103)
17 2l6l_A DNAJ homolog subfamily 99.8 3.2E-20 1.1E-24 140.8 7.0 74 61-134 9-86 (155)
18 3bvo_A CO-chaperone protein HS 99.8 4.1E-19 1.4E-23 140.8 9.0 71 61-131 42-117 (207)
19 2ys8_A RAB-related GTP-binding 99.8 9E-20 3.1E-24 126.8 3.5 61 61-124 26-86 (90)
20 3hho_A CO-chaperone protein HS 99.8 2.7E-19 9.3E-24 138.3 6.5 71 61-131 3-78 (174)
21 3apq_A DNAJ homolog subfamily 99.8 7.4E-19 2.5E-23 137.6 7.2 69 62-132 2-70 (210)
22 1fpo_A HSC20, chaperone protei 99.7 7.1E-19 2.4E-23 135.7 5.2 69 63-131 2-75 (171)
23 3lz8_A Putative chaperone DNAJ 99.7 6.5E-19 2.2E-23 148.4 0.0 68 61-131 27-94 (329)
24 1gh6_A Large T antigen; tumor 99.7 2.4E-19 8.2E-24 129.8 -3.3 62 61-128 7-70 (114)
25 1iur_A KIAA0730 protein; DNAJ 99.7 3.6E-18 1.2E-22 118.3 2.3 62 61-123 15-76 (88)
26 3uo3_A J-type CO-chaperone JAC 99.7 7.2E-18 2.5E-22 131.1 4.2 66 61-131 10-82 (181)
27 1faf_A Large T antigen; J doma 99.7 4.5E-18 1.5E-22 115.5 2.3 58 62-125 11-70 (79)
28 1n4c_A Auxilin; four helix bun 99.7 4.3E-18 1.5E-22 132.2 2.2 65 62-126 117-182 (182)
29 2pf4_E Small T antigen; PP2A, 99.7 2.8E-18 9.7E-23 132.4 -2.1 64 61-130 10-75 (174)
30 3ag7_A Putative uncharacterize 99.7 5E-17 1.7E-21 116.2 4.2 60 61-121 40-104 (106)
31 2qwo_B Putative tyrosine-prote 99.6 4.8E-17 1.7E-21 113.4 3.5 58 62-119 33-91 (92)
32 2guz_A Mitochondrial import in 99.6 4.4E-17 1.5E-21 108.4 0.7 57 61-123 13-70 (71)
33 3apo_A DNAJ homolog subfamily 99.6 1.3E-16 4.5E-21 146.0 0.7 70 61-132 20-89 (780)
34 2y4t_A DNAJ homolog subfamily 99.1 2.4E-11 8.2E-16 101.2 4.0 67 62-128 382-449 (450)
35 2guz_B Mitochondrial import in 99.0 2.6E-10 9.1E-15 74.3 3.4 51 63-119 5-58 (65)
36 2pzi_A Probable serine/threoni 90.6 0.17 5.8E-06 45.2 3.6 46 61-116 628-675 (681)
37 2pk2_A Cyclin-T1, protein TAT; 78.8 1.1 3.9E-05 37.3 2.8 30 62-93 219-248 (358)
38 2cqn_A Formin-binding protein 64.5 21 0.00071 23.0 5.8 57 75-132 7-64 (77)
39 4a3n_A Transcription factor SO 48.2 39 0.0013 20.4 4.9 41 80-127 14-54 (71)
40 3nm9_A HMG-D, high mobility gr 46.1 37 0.0013 20.9 4.6 38 80-127 15-52 (73)
41 2b7e_A PRE-mRNA processing pro 45.7 50 0.0017 20.2 4.9 50 77-131 3-57 (59)
42 3f27_D Transcription factor SO 43.3 51 0.0017 20.7 5.0 41 80-127 18-58 (83)
43 1ug2_A 2610100B20RIK gene prod 42.2 15 0.00053 24.7 2.3 22 73-94 67-88 (95)
44 1i11_A Transcription factor SO 41.2 44 0.0015 20.9 4.4 42 80-128 16-57 (81)
45 2crj_A SWI/SNF-related matrix- 41.1 60 0.002 21.0 5.2 39 80-125 19-57 (92)
46 1qqr_A Streptokinase domain B; 40.0 15 0.00051 26.5 2.1 31 64-94 34-64 (138)
47 2cs1_A PMS1 protein homolog 1; 39.1 46 0.0016 21.5 4.4 38 80-124 19-56 (92)
48 2lr8_A CAsp8-associated protei 44.1 6.8 0.00023 25.1 0.0 23 73-95 47-69 (70)
49 3u2b_C Transcription factor SO 35.4 71 0.0024 19.7 4.7 41 80-127 14-54 (79)
50 1hme_A High mobility group pro 35.1 78 0.0027 19.4 5.2 41 80-127 18-58 (77)
51 2e6o_A HMG box-containing prot 34.8 64 0.0022 20.5 4.5 41 80-127 29-69 (87)
52 2d7l_A WD repeat and HMG-box D 32.2 47 0.0016 21.3 3.4 43 80-129 17-59 (81)
53 1gt0_D Transcription factor SO 31.1 56 0.0019 20.3 3.7 41 80-127 14-54 (80)
54 1wgf_A Upstream binding factor 30.9 1.1E+02 0.0036 19.6 6.5 45 80-131 32-76 (90)
55 3bbz_A P protein, phosphoprote 29.7 84 0.0029 18.5 3.9 26 106-131 4-29 (49)
56 1wz6_A HMG-box transcription f 29.6 56 0.0019 20.5 3.5 41 80-127 19-59 (82)
57 2co9_A Thymus high mobility gr 29.0 69 0.0024 21.1 4.0 38 80-124 29-66 (102)
58 1j46_A SRY, sex-determining re 28.7 73 0.0025 20.1 4.0 39 80-125 16-54 (85)
59 1k99_A Upstream binding factor 28.6 97 0.0033 20.3 4.7 39 80-125 22-60 (99)
60 4aj5_K Spindle and kinetochore 28.6 58 0.002 23.0 3.6 46 74-119 19-64 (123)
61 1hry_A Human SRY; DNA, DNA-bin 28.5 56 0.0019 20.0 3.3 39 80-125 16-54 (76)
62 4euw_A Transcription factor SO 28.0 79 0.0027 21.1 4.2 41 80-127 41-81 (106)
63 1ckt_A High mobility group 1 p 27.9 83 0.0028 18.9 4.0 42 81-127 14-55 (71)
64 1uzc_A Hypothetical protein FL 27.3 1.2E+02 0.004 19.0 5.2 55 73-132 11-68 (71)
65 1xou_B Z5138 gene product; coi 26.0 1.4E+02 0.0047 19.3 6.0 46 77-132 32-77 (95)
66 2lef_A LEF-1 HMG, protein (lym 25.1 90 0.0031 19.7 3.9 39 80-125 14-52 (86)
67 1cf7_A Protein (transcription 22.6 50 0.0017 21.1 2.1 44 73-129 9-52 (76)
68 3tmm_A Transcription factor A, 22.0 1.3E+02 0.0046 23.0 5.0 38 80-124 53-90 (238)
69 2eqz_A High mobility group pro 21.9 1.5E+02 0.0053 18.5 4.6 41 80-125 27-67 (86)
70 3tq6_A Transcription factor A, 20.7 1.6E+02 0.0053 22.2 5.0 38 80-124 21-58 (214)
No 1
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.87 E-value=2.6e-22 Score=135.47 Aligned_cols=69 Identities=41% Similarity=0.616 Sum_probs=63.3
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHHh
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLFR 132 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~~ 132 (172)
..|||+||||+++++.++||++|++|++++|||+++. +.+.+.|+.|++||++|+||.+|+.||..+..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~---~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~ 70 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE---PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEE 70 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC---TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHHCCHHHHHHHHHHccc
Confidence 4689999999999999999999999999999999764 46788999999999999999999999987653
No 2
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=2.6e-22 Score=138.93 Aligned_cols=72 Identities=40% Similarity=0.628 Sum_probs=65.5
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHHhhcC
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLFRRRR 135 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~~~~~ 135 (172)
..|||+||||+++++.++||++|++|++++|||+++. +.+.+.|++|++||++|+||.+|+.||..+...-.
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~---~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 77 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS---PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFT 77 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS---HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHT
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC---hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 5689999999999999999999999999999999763 67889999999999999999999999998764433
No 3
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=5.7e-22 Score=138.17 Aligned_cols=70 Identities=47% Similarity=0.682 Sum_probs=64.0
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
..|||+||||+++++.++||++|++|++++|||+++.. .+.+.+.|++|++||++|+||.+|+.||..+.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 77 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDN-KEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGC 77 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSC-SHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCS
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCcc-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 45899999999999999999999999999999997642 36788999999999999999999999998865
No 4
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=2.6e-22 Score=141.89 Aligned_cols=69 Identities=33% Similarity=0.598 Sum_probs=63.9
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
..+||+||||+++++.++||++|++|++++|||+++. .+.+.+.|++|++||+||+||.+|+.||..|.
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSG--SAEAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSS--CSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--CHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 5689999999999999999999999999999999764 35788999999999999999999999999775
No 5
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.85 E-value=7.8e-22 Score=137.68 Aligned_cols=71 Identities=39% Similarity=0.631 Sum_probs=63.2
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHHhhcCC
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLFRRRRP 136 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~~~~~~ 136 (172)
..|||+||||+++++.++||++|++|++++|||+++. ..+.|++|++||++|+||.+|+.||..+......
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-----~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 77 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTG-----DTEKFKEISEAFEILNDPQKREIYDQYGLEAARS 77 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTC-----CHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHT
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----hHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhc
Confidence 5689999999999999999999999999999999753 2458999999999999999999999988755443
No 6
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=8.8e-22 Score=133.21 Aligned_cols=68 Identities=40% Similarity=0.672 Sum_probs=63.0
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
..|||+||||+++++.++||++|++|++++|||++.. +.+.+.|++|++||++|+||.+|+.||..+.
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~---~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~ 73 (78)
T 2ctp_A 6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA---PGATEAFKAIGTAYAVLSNPEKRKQYDQFGS 73 (78)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS---HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence 5689999999999999999999999999999999754 6788999999999999999999999998754
No 7
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.85 E-value=1.3e-21 Score=135.49 Aligned_cols=70 Identities=36% Similarity=0.558 Sum_probs=64.1
Q ss_pred CCccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 59 PGPGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 59 ~~~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
....|||+||||+++++.++||++|++|++++|||+++. +.+.+.|++|++||++|+||.+|..||..+.
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~---~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 83 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD---PGAEDRFIQISKAYEILSNEEKRTNYDHYGS 83 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS---TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCC
Confidence 346799999999999999999999999999999999764 5678899999999999999999999998754
No 8
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.85 E-value=5.8e-22 Score=138.45 Aligned_cols=71 Identities=27% Similarity=0.492 Sum_probs=64.3
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCC----ChHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQ----NENSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~----~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
..|||+||||+++++.++||++|++|++++|||+++... .+.+.+.|++|++||+||+||.+|+.||..|.
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 569999999999999999999999999999999976321 25677899999999999999999999999886
No 9
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=8.9e-22 Score=133.40 Aligned_cols=69 Identities=43% Similarity=0.654 Sum_probs=63.0
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
..|||+||||+++++.++||++|++|++++|||+++. .+.+.+.|++|++||++|+||.+|+.||..+.
T Consensus 6 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~--~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 74 (79)
T 2dn9_A 6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKD--DPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGS 74 (79)
T ss_dssp CSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSS--CTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--CHHHHHHHHHHHHHHHHHCCHHHHHHHHhccC
Confidence 5689999999999999999999999999999999764 35678899999999999999999999998653
No 10
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=2.9e-21 Score=139.37 Aligned_cols=72 Identities=26% Similarity=0.396 Sum_probs=65.6
Q ss_pred CccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHHhh
Q 030733 60 GPGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLFRR 133 (172)
Q Consensus 60 ~~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~~~ 133 (172)
...|||+||||+++++.++||++|++|++++|||+++. .+.+.+.|++|++||++|+||.+|+.||..+...
T Consensus 18 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 89 (112)
T 2ctq_A 18 DTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPE--NPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ 89 (112)
T ss_dssp CCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTT--CSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--cHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence 46799999999999999999999999999999999764 2468899999999999999999999999998743
No 11
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=3.3e-21 Score=131.45 Aligned_cols=70 Identities=43% Similarity=0.600 Sum_probs=63.0
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
..|||+||||+++++.++||++|++|++++|||+++.. .+.+.+.|++|++||++|+||.+|+.||..+.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 77 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEN-KEEAERRFKQVAEAYEVLSDAKKRDIYDRYGS 77 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTT-HHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence 46899999999999999999999999999999997542 24678899999999999999999999998653
No 12
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.84 E-value=3.6e-21 Score=136.18 Aligned_cols=71 Identities=42% Similarity=0.578 Sum_probs=64.1
Q ss_pred cCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHHhh
Q 030733 62 GSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLFRR 133 (172)
Q Consensus 62 ~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~~~ 133 (172)
.|||+||||+++++.++||++|++|++++|||+++.. .+.+.+.|++|++||++|+||.+|+.||..+...
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~ 72 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDN-KEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREG 72 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSC-CHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCcc-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 3899999999999999999999999999999997642 4678899999999999999999999999987643
No 13
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=8.8e-21 Score=136.27 Aligned_cols=72 Identities=40% Similarity=0.578 Sum_probs=64.9
Q ss_pred CCCccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 58 SPGPGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 58 ~~~~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
.....+||+||||+++++.++||++|++|++++|||+++. .+.+.+.|++|++||++|+||.+|+.||....
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~--~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~ 84 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPD--NPEAADKFKEINNAHAILTDATKRNIYDKYGS 84 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTT--CHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--cHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcc
Confidence 3446799999999999999999999999999999999764 36788999999999999999999999998654
No 14
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.83 E-value=8.1e-21 Score=126.95 Aligned_cols=65 Identities=42% Similarity=0.668 Sum_probs=59.4
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTL 130 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l 130 (172)
..+||+||||+++++.++||++|++|++++|||+++. ..+.|++|++||++|+||.+|+.||...
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~-----~~~~f~~i~~Ay~~L~d~~~R~~YD~~g 71 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD-----GAEQFKQISQAYEVLSDEKKRQIYDQGG 71 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT-----CHHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC-----HHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 5689999999999999999999999999999998753 2578999999999999999999999853
No 15
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.82 E-value=8.2e-21 Score=136.24 Aligned_cols=72 Identities=32% Similarity=0.498 Sum_probs=65.2
Q ss_pred CccCccccccCCCCC-CHHHHHHHHHHHHHhhCCCCccc-CCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 60 GPGSLYEILGIQTGA-TCQEIKTAYRKLARVLHPDVAAK-SQNENSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 60 ~~~~~YevLgv~~~a-s~~eIk~ayr~l~~~~HPDk~~~-~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
...|||+||||++++ +.++||++|++|++++|||+++. ...+.+.+.|++|++||++|+||.+|+.||..+.
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 467999999999999 99999999999999999999763 2336678899999999999999999999999886
No 16
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.81 E-value=3e-21 Score=137.23 Aligned_cols=71 Identities=39% Similarity=0.630 Sum_probs=64.1
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHHhh
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLFRR 133 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~~~ 133 (172)
..|||+||||+++++.++||++|++|++++|||+++. .+.+.+.|++|++||++|+||.+|+.||..+...
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 72 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQG--DKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 72 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTT--TCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--cHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhh
Confidence 4689999999999999999999999999999999764 2467789999999999999999999999877643
No 17
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.81 E-value=3.2e-20 Score=140.75 Aligned_cols=74 Identities=26% Similarity=0.499 Sum_probs=65.7
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCC----hHHHHHHHHHHHHHHHcCChhHHHHHHHHHHhhc
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQN----ENSAYKFMKLHEAYETLSDPKKRADYDRTLFRRR 134 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~----~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~~~~ 134 (172)
..|||+||||+++++.++||++|++|++++||||++.... +.+.+.|++|++||++|+||.+|+.||..+....
T Consensus 9 ~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~~~ 86 (155)
T 2l6l_A 9 KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCEDD 86 (155)
T ss_dssp CSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHHHH
T ss_pred CCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcchhh
Confidence 5689999999999999999999999999999999875432 3467899999999999999999999999987543
No 18
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.78 E-value=4.1e-19 Score=140.79 Aligned_cols=71 Identities=21% Similarity=0.401 Sum_probs=62.7
Q ss_pred ccCccccccCCCC--CCHHHHHHHHHHHHHhhCCCCcccCCC---hHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 61 PGSLYEILGIQTG--ATCQEIKTAYRKLARVLHPDVAAKSQN---ENSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 61 ~~~~YevLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~~---~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
..|||+||||+++ ++.++||++||+|++++|||+++.... ..+.+.|+.|++||+||+||.+|+.||..+.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~ 117 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH 117 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 5699999999986 789999999999999999999875321 2356789999999999999999999999886
No 19
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=9e-20 Score=126.76 Aligned_cols=61 Identities=33% Similarity=0.509 Sum_probs=56.0
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHH
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRA 124 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~ 124 (172)
..|||+||||+++++.++||++|++|++++|||+++. +.+.+.|++|++||++|+|+.+|+
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~---~~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA---PGSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC---TTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHHCCccccc
Confidence 4699999999999999999999999999999999764 567889999999999999998774
No 20
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.77 E-value=2.7e-19 Score=138.32 Aligned_cols=71 Identities=25% Similarity=0.473 Sum_probs=63.0
Q ss_pred ccCccccccCCCCCC--HHHHHHHHHHHHHhhCCCCcccCCCh---HHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 61 PGSLYEILGIQTGAT--CQEIKTAYRKLARVLHPDVAAKSQNE---NSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 61 ~~~~YevLgv~~~as--~~eIk~ayr~l~~~~HPDk~~~~~~~---~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
..|||+||||+++++ .++||++||+|++++|||+++..... .+.+.|..|++||+||+||.+|+.||..|.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 469999999999887 99999999999999999997754322 267899999999999999999999999986
No 21
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.76 E-value=7.4e-19 Score=137.57 Aligned_cols=69 Identities=38% Similarity=0.643 Sum_probs=63.1
Q ss_pred cCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHHh
Q 030733 62 GSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLFR 132 (172)
Q Consensus 62 ~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~~ 132 (172)
.|||+||||+++++.++||++||+|++++|||+++. .+.+.++|+.|++||++|+||.+|+.||.....
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~--~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~ 70 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPN--NPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEK 70 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTT--CTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccc
Confidence 489999999999999999999999999999999764 356888999999999999999999999997653
No 22
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.75 E-value=7.1e-19 Score=135.67 Aligned_cols=69 Identities=23% Similarity=0.428 Sum_probs=62.1
Q ss_pred CccccccCCCCC--CHHHHHHHHHHHHHhhCCCCcccCCC---hHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 63 SLYEILGIQTGA--TCQEIKTAYRKLARVLHPDVAAKSQN---ENSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 63 ~~YevLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~~~---~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
|||+||||++++ +..+||++||+|++++|||+++.... ..+.+.|+.|++||+||+||.+|+.||..+.
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 799999999998 99999999999999999999875332 2456799999999999999999999999886
No 23
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.71 E-value=6.5e-19 Score=148.39 Aligned_cols=68 Identities=44% Similarity=0.707 Sum_probs=0.0
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
..|||+||||+++|+.+|||+|||+|++++|||+++. +.+.++|++|++||++|+||.+|+.||..+.
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~---~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 94 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE---NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQ 94 (329)
T ss_dssp -----------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC---hHHHHHHHHHHHHHHHhhhhhhhcccchhhc
Confidence 4699999999999999999999999999999999764 4678899999999999999999999998754
No 24
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.70 E-value=2.4e-19 Score=129.84 Aligned_cols=62 Identities=26% Similarity=0.389 Sum_probs=56.8
Q ss_pred ccCccccccCCCCCCH--HHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHH
Q 030733 61 PGSLYEILGIQTGATC--QEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 128 (172)
Q Consensus 61 ~~~~YevLgv~~~as~--~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~ 128 (172)
..++|+||||+++++. ++||++||+|++++|||+++. .++|++|++||+||+||.+|+.||.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~------~e~f~~I~~AYevL~d~~~R~~~~~ 70 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD------EEKMKKMNTLYKKMEDGVKYAHQPD 70 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT------TTTTHHHHHHHHHHHHHHHSCCSSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc------HHHHHHHHHHHHHHCCHHHHHHhhh
Confidence 3589999999999998 999999999999999999654 3689999999999999999999984
No 25
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.70 E-value=3.6e-18 Score=118.33 Aligned_cols=62 Identities=16% Similarity=0.137 Sum_probs=54.9
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHH
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKR 123 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R 123 (172)
..++|+||||.++++.++||++|++|++++|||+++.. .+.+.+.|++|++||++|+|...|
T Consensus 15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~-~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPEN-HDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSC-HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-hHHHHHHHHHHHHHHHHHHhhccc
Confidence 46899999999999999999999999999999997642 256889999999999999987554
No 26
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.69 E-value=7.2e-18 Score=131.10 Aligned_cols=66 Identities=29% Similarity=0.551 Sum_probs=59.6
Q ss_pred ccCccccc------cCCC-CCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 61 PGSLYEIL------GIQT-GATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 61 ~~~~YevL------gv~~-~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
..|||+|| |+++ +++..+||++||+|++++|||+++. +.+.|+.|++||+||+||.+|+.||..|.
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~ 82 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ-----GSEQSSTLNQAYHTLKDPLRRSQYMLKLL 82 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS-----CSSGGGSHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc-----HHHHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 56999999 4665 8999999999999999999999754 55689999999999999999999999994
No 27
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.69 E-value=4.5e-18 Score=115.52 Aligned_cols=58 Identities=21% Similarity=0.331 Sum_probs=52.5
Q ss_pred cCccccccCCCC--CCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHH
Q 030733 62 GSLYEILGIQTG--ATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRAD 125 (172)
Q Consensus 62 ~~~YevLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~ 125 (172)
.++|+||||+++ ++.++||++||+|++++|||+++ ..+.|++|++||++|+|+.+|..
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~------~~~~f~~i~~AYe~L~~~~~r~~ 70 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG------SHALMQELNSLWGTFKTEVYNLR 70 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC------CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC------CHHHHHHHHHHHHHHhhHHHHHH
Confidence 479999999999 99999999999999999999853 24789999999999999988765
No 28
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.69 E-value=4.3e-18 Score=132.19 Aligned_cols=65 Identities=26% Similarity=0.466 Sum_probs=58.4
Q ss_pred cCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCCh-HHHHHHHHHHHHHHHcCChhHHHHH
Q 030733 62 GSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNE-NSAYKFMKLHEAYETLSDPKKRADY 126 (172)
Q Consensus 62 ~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~-~~~~~f~~I~~Ay~vLsdp~~R~~Y 126 (172)
.++|+||||+++++.++||++||++++++||||++....+ .+.+.|+.|++||++|+|+.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 5899999999999999999999999999999998753322 3788999999999999999999876
No 29
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.66 E-value=2.8e-18 Score=132.42 Aligned_cols=64 Identities=25% Similarity=0.347 Sum_probs=56.1
Q ss_pred ccCccccccCCCCCC--HHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHH
Q 030733 61 PGSLYEILGIQTGAT--CQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTL 130 (172)
Q Consensus 61 ~~~~YevLgv~~~as--~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l 130 (172)
..++|+||||+++++ .++||+|||++++++|||+++. .++|++|++||++|+||.+|+.||...
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~------~e~F~~I~~AYevLsdp~kR~~YD~~G 75 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD------EEKMKKMNTLYKKMEDGVKYAHQPDFG 75 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C------CTTTTHHHHHHHHHHHHHHHHTSCGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC------HHHHHHHHHHHHHhCCHHHHHHHhccC
Confidence 358999999999998 6999999999999999999654 368999999999999999999999865
No 30
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.65 E-value=5e-17 Score=116.20 Aligned_cols=60 Identities=15% Similarity=0.237 Sum_probs=52.2
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCC-----hHHHHHHHHHHHHHHHcCChh
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQN-----ENSAYKFMKLHEAYETLSDPK 121 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~-----~~~~~~f~~I~~Ay~vLsdp~ 121 (172)
..+||+|||++. ++.++||++||++++++||||++.... ..+.++|+.|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 469999999996 999999999999999999999764221 246789999999999999985
No 31
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.65 E-value=4.8e-17 Score=113.40 Aligned_cols=58 Identities=24% Similarity=0.426 Sum_probs=51.4
Q ss_pred cCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCC-hHHHHHHHHHHHHHHHcCC
Q 030733 62 GSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQN-ENSAYKFMKLHEAYETLSD 119 (172)
Q Consensus 62 ~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~-~~~~~~f~~I~~Ay~vLsd 119 (172)
.++|++|||.+.++.++||+|||++++++||||++.... ..+.+.|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 479999999999999999999999999999999875332 3578899999999999964
No 32
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.62 E-value=4.4e-17 Score=108.37 Aligned_cols=57 Identities=25% Similarity=0.306 Sum_probs=50.0
Q ss_pred ccCccccccCCC-CCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHH
Q 030733 61 PGSLYEILGIQT-GATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKR 123 (172)
Q Consensus 61 ~~~~YevLgv~~-~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R 123 (172)
..++|+||||++ +++.++||++||+|++++|||+.+ ..+.|++|++||++|+|+..|
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g------~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG------SPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC------CHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC------CHHHHHHHHHHHHHHhhhhhc
Confidence 357999999999 799999999999999999999842 345899999999999987654
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.59 E-value=1.3e-16 Score=146.01 Aligned_cols=70 Identities=37% Similarity=0.630 Sum_probs=40.5
Q ss_pred ccCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHHh
Q 030733 61 PGSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLFR 132 (172)
Q Consensus 61 ~~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~~ 132 (172)
..|||+||||+++|+.++||+|||+|++++|||+++. .+.+.++|++|++||++|+||.+|+.||.....
T Consensus 20 ~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~--~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~ 89 (780)
T 3apo_A 20 DQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPN--NPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEK 89 (780)
T ss_dssp ---CHHHHTCCTTCCHHHHHHHHCC-------------------------CTHHHHHHSHHHHHHHTTC---
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ChHHHHHHHHHHHHHHHHcChHHHHHHHhhccc
Confidence 5699999999999999999999999999999999753 356788999999999999999999999987653
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.13 E-value=2.4e-11 Score=101.19 Aligned_cols=67 Identities=40% Similarity=0.626 Sum_probs=55.4
Q ss_pred cCccccccCCCCCCHHHHHHHHHHHHHhhCCCCcccCC-ChHHHHHHHHHHHHHHHcCChhHHHHHHH
Q 030733 62 GSLYEILGIQTGATCQEIKTAYRKLARVLHPDVAAKSQ-NENSAYKFMKLHEAYETLSDPKKRADYDR 128 (172)
Q Consensus 62 ~~~YevLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~ 128 (172)
.++|.+||+...++.++|+++|+++++++|||+.+... .+.+.+.|+.|++||++|+|+.+|..||.
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 48999999999999999999999999999999875421 24578899999999999999999999996
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.98 E-value=2.6e-10 Score=74.28 Aligned_cols=51 Identities=24% Similarity=0.210 Sum_probs=45.0
Q ss_pred CccccccCCCC---CCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCC
Q 030733 63 SLYEILGIQTG---ATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSD 119 (172)
Q Consensus 63 ~~YevLgv~~~---as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsd 119 (172)
.-|.||||+++ ++.++|+++||+|+..+|||+ .+.......|++|+++|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDk------GGS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEK------GGSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGG------TCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCC------CCCHHHHHHHHHHHHHHHH
Confidence 35889999999 999999999999999999997 4556678899999999864
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=90.55 E-value=0.17 Score=45.24 Aligned_cols=46 Identities=22% Similarity=0.270 Sum_probs=36.1
Q ss_pred ccCccccccCCCCCCH--HHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHH
Q 030733 61 PGSLYEILGIQTGATC--QEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYET 116 (172)
Q Consensus 61 ~~~~YevLgv~~~as~--~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~v 116 (172)
..+||.|||++.+... .+|+++||++++..+++ .+++..|..|+.|
T Consensus 628 ~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~----------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 628 KASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ----------RHRYTLVDMANKV 675 (681)
T ss_dssp CCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH----------HHHHHHHHHHHHH
T ss_pred CCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh----------HHHHHHHHHhccc
Confidence 4569999999776654 77999999999965555 2578888888876
No 37
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=78.80 E-value=1.1 Score=37.29 Aligned_cols=30 Identities=10% Similarity=0.181 Sum_probs=23.4
Q ss_pred cCccccccCCCCCCHHHHHHHHHHHHHhhCCC
Q 030733 62 GSLYEILGIQTGATCQEIKTAYRKLARVLHPD 93 (172)
Q Consensus 62 ~~~YevLgv~~~as~~eIk~ayr~l~~~~HPD 93 (172)
..++++|.. +.+.++|+..++.+...+.-.
T Consensus 219 ~~W~~~~~~--~vt~~~l~~i~~~il~~y~~~ 248 (358)
T 2pk2_A 219 KHWWEYVDA--TVTLELLDELTHEFLQILEKT 248 (358)
T ss_dssp CCTTTTSCS--SCCHHHHHHHHHHHHHHTTTC
T ss_pred cchHHHHhc--cCCHHHHHHHHHHHHHHHHhC
Confidence 468888754 468999999999999887443
No 38
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=64.49 E-value=21 Score=23.04 Aligned_cols=57 Identities=12% Similarity=0.265 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCCh-hHHHHHHHHHHh
Q 030733 75 TCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDP-KKRADYDRTLFR 132 (172)
Q Consensus 75 s~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp-~~R~~YD~~l~~ 132 (172)
-...++..|+.+.+...|.......=+.+..+|.... +|..|.+. .++..|+.++..
T Consensus 7 r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi~~ 64 (77)
T 2cqn_A 7 GMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFMHV 64 (77)
T ss_dssp SHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHHHH
Confidence 4667899999999999887654433345555665554 89999775 666777777753
No 39
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=48.24 E-value=39 Score=20.38 Aligned_cols=41 Identities=22% Similarity=0.213 Sum_probs=29.5
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYD 127 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD 127 (172)
.+.++..++.-||+. ...+..+.|.+.|..|++.++....+
T Consensus 14 ~~~~r~~~~~~~p~~-------~~~eisk~lg~~Wk~ls~~eK~~y~~ 54 (71)
T 4a3n_A 14 AKDERKRLAQQNPDL-------HNAELSKMLGKSWKALTLAEKRPFVE 54 (71)
T ss_dssp HHHHHHHHHTTCTTS-------CHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 456677788888984 24567888999999999665444333
No 40
>3nm9_A HMG-D, high mobility group protein D; DNA bending, non-sequence-specific, HMG chromosomal protein; HET: DNA; 2.85A {Drosophila melanogaster} SCOP: a.21.1.1 PDB: 1e7j_A* 1hma_A 1qrv_A*
Probab=46.08 E-value=37 Score=20.89 Aligned_cols=38 Identities=11% Similarity=0.246 Sum_probs=28.2
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYD 127 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD 127 (172)
.+.+|..++.-||+. ...+..+.|.+.|..|++ |..|.
T Consensus 15 ~~~~r~~~~~~~p~~-------~~~eisk~lg~~Wk~ls~---K~~y~ 52 (73)
T 3nm9_A 15 LNSARESIKRENPGI-------KVTEVAKRGGELWRAMKD---KSEWE 52 (73)
T ss_dssp HHHHHHHHHHHSSSC-------CHHHHHHHHHHHHHHCSC---CHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHHHHHcCCc---hHHHH
Confidence 455677778889984 345678889999999997 55554
No 41
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=45.67 E-value=50 Score=20.24 Aligned_cols=50 Identities=16% Similarity=0.217 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHH---HHHHHHcCC-hh-HHHHHHHHHH
Q 030733 77 QEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKL---HEAYETLSD-PK-KRADYDRTLF 131 (172)
Q Consensus 77 ~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I---~~Ay~vLsd-p~-~R~~YD~~l~ 131 (172)
+|..++|.+|.+...=|-. =.=++.++.| ..-|.+|.| |. ++..|+.++.
T Consensus 3 eEae~aF~~lL~~~~V~s~-----wsweqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~~ 57 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDST-----WSFSRIISELGTRDPRYWMVDDDPLWKKEMFEKYLS 57 (59)
T ss_dssp THHHHHHHHHHHHTTCCSS-----CCHHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCC-----CcHHHHHHHhccCCCccccccCCHHHHHHHHHHHHh
Confidence 5778999999998866521 2233445555 458999997 65 6778988875
No 42
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=43.35 E-value=51 Score=20.66 Aligned_cols=41 Identities=22% Similarity=0.213 Sum_probs=29.8
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYD 127 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD 127 (172)
.+.+|..++.-||+. ...+..+.|.+.|..|++.++....+
T Consensus 18 ~~~~r~~~~~~~p~~-------~~~eisk~lg~~Wk~ls~~eK~~y~~ 58 (83)
T 3f27_D 18 AKDERKRLAQQNPDL-------HNAELSKMLGKSWKALTLAEKRPFVE 58 (83)
T ss_dssp HHHHHHHHHHHCSSS-------CHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 456777888889984 24567888999999999665544333
No 43
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=42.20 E-value=15 Score=24.74 Aligned_cols=22 Identities=23% Similarity=0.443 Sum_probs=18.7
Q ss_pred CCCHHHHHHHHHHHHHhhCCCC
Q 030733 73 GATCQEIKTAYRKLARVLHPDV 94 (172)
Q Consensus 73 ~as~~eIk~ayr~l~~~~HPDk 94 (172)
+-++++|+.+|++|++++|-.+
T Consensus 67 Nks~nqV~~RFq~Lm~Lf~~~~ 88 (95)
T 1ug2_A 67 NKTPVEVSHRFRELMQLFHTAC 88 (95)
T ss_dssp SCCHHHHHHHHHHHHHHHHHCS
T ss_pred cCCHHHHHHHHHHHHHHHHHHh
Confidence 5688999999999999998654
No 44
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=41.17 E-value=44 Score=20.95 Aligned_cols=42 Identities=14% Similarity=0.241 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDR 128 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~ 128 (172)
.+.++..++.-||+. ...+..+.|.+.|..|++.++...++.
T Consensus 16 ~~~~r~~~~~~~p~~-------~~~eisk~lg~~Wk~ls~eeK~~y~~~ 57 (81)
T 1i11_A 16 AKDERRKILQAFPDM-------HNSNISKILGSRWKAMTNLEKQPYYEE 57 (81)
T ss_dssp HHHHHHHHHTTCSSC-------CHHHHHHHHHHHHTTSCSGGGHHHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHhhhhhCCHHHHHHHHHH
Confidence 345667777778884 345677899999999998776555543
No 45
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=41.10 E-value=60 Score=20.96 Aligned_cols=39 Identities=21% Similarity=0.197 Sum_probs=28.6
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRAD 125 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~ 125 (172)
.+.+|..++.-||+. ...+..+.|.+.|..|++.++...
T Consensus 19 ~~~~r~~~~~~~p~~-------~~~eisk~lg~~Wk~ls~eeK~~Y 57 (92)
T 2crj_A 19 LNERREQIRTRHPDL-------PFPEITKMLGAEWSKLQPAEKQRY 57 (92)
T ss_dssp HHHHHHHHHHHCTTC-------CHHHHHHHHHHHHHTCCTTHHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHHHHHcCCHHHHHHH
Confidence 355677777889984 345677889999999998765443
No 46
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=40.03 E-value=15 Score=26.52 Aligned_cols=31 Identities=26% Similarity=0.318 Sum_probs=27.9
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHhhCCCC
Q 030733 64 LYEILGIQTGATCQEIKTAYRKLARVLHPDV 94 (172)
Q Consensus 64 ~YevLgv~~~as~~eIk~ayr~l~~~~HPDk 94 (172)
++..|.|....+.+|++++-..+..++||+-
T Consensus 34 ~l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 34 LLKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp EEEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hhcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 4778888888999999999999999999994
No 47
>2cs1_A PMS1 protein homolog 1; DNA mismatch repair protein PMS1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.11 E-value=46 Score=21.52 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=27.5
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRA 124 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~ 124 (172)
.+..|..++.-||+. ...+..+.|.+.|..|++.++..
T Consensus 19 ~~~~r~~~~~~~p~~-------~~~eisk~lg~~Wk~ls~eeK~~ 56 (92)
T 2cs1_A 19 VQDHRPQFLIENPKT-------SLEDATLQIEELWKTLSEEEKLK 56 (92)
T ss_dssp HHHHHHHHHHHCCSS-------CHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHHHHhcCCHHHHHH
Confidence 455667777889984 24567788999999999765433
No 48
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=44.08 E-value=6.8 Score=25.05 Aligned_cols=23 Identities=4% Similarity=0.277 Sum_probs=19.7
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCc
Q 030733 73 GATCQEIKTAYRKLARVLHPDVA 95 (172)
Q Consensus 73 ~as~~eIk~ayr~l~~~~HPDk~ 95 (172)
+-++++|+.+|++|++++|-.|+
T Consensus 47 nks~~QV~~RF~~Lm~Lf~kSk~ 69 (70)
T 2lr8_A 47 DKNPNQVSERFQQLMKLFEKSKC 69 (70)
Confidence 56889999999999999987664
No 49
>3u2b_C Transcription factor SOX-4; HMG domain, transcriptional regulation, transcription-DNA CO; HET: DNA; 2.40A {Mus musculus} SCOP: a.21.1.1
Probab=35.42 E-value=71 Score=19.69 Aligned_cols=41 Identities=20% Similarity=0.177 Sum_probs=28.8
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYD 127 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD 127 (172)
.+.++..++.-||+. ...+..+.|.+.|..|++.++....+
T Consensus 14 ~~~~r~~~~~~~p~~-------~~~eisk~lg~~Wk~ls~~eK~~y~~ 54 (79)
T 3u2b_C 14 SQIERRKIMEQSPDM-------HNAEISKRLGKRWKLLKDSDKIPFIQ 54 (79)
T ss_dssp HHHHHHHHHTTSTTS-------CHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCC-------CHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 456677777888884 34467888999999999665444333
No 50
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=35.14 E-value=78 Score=19.40 Aligned_cols=41 Identities=20% Similarity=0.203 Sum_probs=28.7
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYD 127 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD 127 (172)
.+..+..++.-||+. ...+..+.|.+.|..|++.++....+
T Consensus 18 ~~~~r~~~~~~~p~~-------~~~eisk~lg~~Wk~ls~~eK~~y~~ 58 (77)
T 1hme_A 18 CSEYRPKIKGEHPGL-------SIGDVAKKLGEMWNNTAADDKQPYEK 58 (77)
T ss_dssp HHHHHHHHHHHCTTC-------CHHHHHHHHHHHHHHSCGGGSHHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 345566677778984 34567889999999999776544333
No 51
>2e6o_A HMG box-containing protein 1; HMG-box domain, HMG-box transcription factor 1, high mobility group box transcription factor 1, structural genomics; NMR {Homo sapiens}
Probab=34.83 E-value=64 Score=20.55 Aligned_cols=41 Identities=12% Similarity=0.155 Sum_probs=28.7
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYD 127 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD 127 (172)
.+.+|..++.-||+. ...+..+.|.+.|..|++.++....+
T Consensus 29 ~~~~r~~~~~~~P~~-------~~~eisk~lg~~Wk~ls~eeK~~y~~ 69 (87)
T 2e6o_A 29 AKKYRVEYTQMYPGK-------DNRAISVILGDRWKKMKNEERRMYTL 69 (87)
T ss_dssp HHHTHHHHHHHCTTS-------CHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 455667777889984 34456788999999999665444333
No 52
>2d7l_A WD repeat and HMG-box DNA binding protein 1; high mobility group box domain, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.22 E-value=47 Score=21.27 Aligned_cols=43 Identities=14% Similarity=0.100 Sum_probs=30.9
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRT 129 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~ 129 (172)
-..+|..++.-||+.. ...+..+.|.+.|..|++.++ ..|...
T Consensus 17 ~~e~R~~ik~~~P~~~------~~~eisK~lge~Wk~ls~eeK-~~y~~~ 59 (81)
T 2d7l_A 17 LEENRSNILSDNPDFS------DEADIIKEGMIRFRVLSTEER-KVWANK 59 (81)
T ss_dssp HHHHHHHHHHHCTTCC------SHHHHHHHHHHHHSSSCHHHH-HHHHHH
T ss_pred HHHHHHHHHHHCCCCc------hhHHHHHHHHHHHHcCCHHHH-HHHHHH
Confidence 4567788888899941 245678899999999996654 455443
No 53
>1gt0_D Transcription factor SOX-2; POU factors, SOX proteins; 2.6A {Mus musculus} SCOP: a.21.1.1 PDB: 2le4_A 1o4x_B
Probab=31.14 E-value=56 Score=20.32 Aligned_cols=41 Identities=20% Similarity=0.251 Sum_probs=28.2
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYD 127 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD 127 (172)
.+.++..++.-||+. ...+..+.|.+.|..|++.++....+
T Consensus 14 ~~~~r~~~~~~~p~~-------~~~eisk~lg~~Wk~ls~eeK~~y~~ 54 (80)
T 1gt0_D 14 SRGQRRKMAQENPKM-------HNSEISKRLGAEWKLLSETEKRPFID 54 (80)
T ss_dssp HHHHHHHHHTTSTTS-------CHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 345666677778884 34567788999999999765444433
No 54
>1wgf_A Upstream binding factor 1; transcription factor, DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=30.95 E-value=1.1e+02 Score=19.63 Aligned_cols=45 Identities=18% Similarity=0.157 Sum_probs=31.3
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
.+.+|..++.-||+. ...+..+.|.+.|..|++.++....+..-.
T Consensus 32 ~~~~r~~~k~~~P~~-------~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~ 76 (90)
T 1wgf_A 32 SEEKRRQLQEERPEL-------SESELTRLLARMWNDLSEKKKAKYKAREAA 76 (90)
T ss_dssp HHHTHHHHHHHCTTS-------CHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 345667777889984 345677899999999997665555454433
No 55
>3bbz_A P protein, phosphoprotein; molten globule, viral protein, replication; 2.10A {Mumps virus}
Probab=29.72 E-value=84 Score=18.53 Aligned_cols=26 Identities=15% Similarity=0.387 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHH
Q 030733 106 KFMKLHEAYETLSDPKKRADYDRTLF 131 (172)
Q Consensus 106 ~f~~I~~Ay~vLsdp~~R~~YD~~l~ 131 (172)
+....+-|-+.++||..|..|+..|.
T Consensus 4 Kltl~~l~kdCi~np~~r~~Fe~ki~ 29 (49)
T 3bbz_A 4 KVMITKMITDSVANPQMKQAFEQRLA 29 (49)
T ss_dssp HHHHHHHHHHHCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34566778899999999999999886
No 56
>1wz6_A HMG-box transcription factor BBX; bobby SOX homolog, HMG_BOX domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative; NMR {Mus musculus}
Probab=29.57 E-value=56 Score=20.46 Aligned_cols=41 Identities=22% Similarity=0.196 Sum_probs=28.3
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYD 127 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD 127 (172)
.+.++..++.-||+.. ..+..+.|.+.|..|++.++....+
T Consensus 19 ~~~~r~~~~~~~p~~~-------~~eisk~lg~~Wk~ls~~eK~~y~~ 59 (82)
T 1wz6_A 19 CKRHRSLVRQEHPRLD-------NRGATKILADWWAVLDPKEKQKYTD 59 (82)
T ss_dssp HHHHHHHHHHHCSSSC-------TTHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC-------HHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 4566777788899852 2345678999999999765544444
No 57
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=29.02 E-value=69 Score=21.13 Aligned_cols=38 Identities=8% Similarity=0.080 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRA 124 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~ 124 (172)
.+.+|..++.-||+. ...+..+.|.+.|..|++.++..
T Consensus 29 ~~~~r~~i~~~~P~~-------~~~eisk~lg~~Wk~ls~eeK~~ 66 (102)
T 2co9_A 29 FRDTQAAIKGQNPNA-------TFGEVSKIVASMWDGLGEEQKQV 66 (102)
T ss_dssp HHHHHHHHHHHCTTS-------CHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHHHHccCCHHHHHH
Confidence 345566677789984 34566788999999998765433
No 58
>1j46_A SRY, sex-determining region Y protein; MALE sex determining factor, SRY, sex-reversal mutation; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1j47_A
Probab=28.69 E-value=73 Score=20.13 Aligned_cols=39 Identities=13% Similarity=0.150 Sum_probs=27.3
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRAD 125 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~ 125 (172)
.+.++..++.-||+. ...+..+.|.+.|..|++.++...
T Consensus 16 ~~~~r~~~~~~~P~~-------~~~eisk~lg~~Wk~ls~eeK~~y 54 (85)
T 1j46_A 16 SRDQRRKMALENPRM-------RNSEISKQLGYQWKMLTEAEKWPF 54 (85)
T ss_dssp HHHHHHHHHHHSTTS-------CHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHHHHHHCCHHHHHHH
Confidence 355666777788984 344567889999999986654433
No 59
>1k99_A Upstream binding factor 1; alpha-helix, L-shape, DNA binding protein; NMR {Homo sapiens} SCOP: a.21.1.1
Probab=28.64 E-value=97 Score=20.31 Aligned_cols=39 Identities=23% Similarity=0.216 Sum_probs=27.8
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRAD 125 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~ 125 (172)
.+..|..++.-||+. ...+..+.|.+.|..|++.++...
T Consensus 22 ~~~~r~~ik~~~P~~-------~~~eisk~lg~~Wk~ls~eeK~~Y 60 (99)
T 1k99_A 22 FMEKRAKYAKLHPEM-------SNLDLTKILSKKYKELPEKKKMKY 60 (99)
T ss_dssp HHHHHHHHHTTCTTS-------CSHHHHHHHHHHHHHSCSTTHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHHHHHhCCHHHHHHH
Confidence 345566777778884 234567889999999998765443
No 60
>4aj5_K Spindle and kinetochore-associated protein 2; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=28.60 E-value=58 Score=23.00 Aligned_cols=46 Identities=17% Similarity=0.199 Sum_probs=26.7
Q ss_pred CCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCC
Q 030733 74 ATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSD 119 (172)
Q Consensus 74 as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsd 119 (172)
++.+.|..+-.--.+..|||..+....-.-.+..+.|..-|.+|..
T Consensus 19 sDLdyiq~RLe~Ef~~~~Pd~A~e~NPv~Ll~~LsaIk~ry~~L~~ 64 (123)
T 4aj5_K 19 SDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSVIKSRYQTLYA 64 (123)
T ss_dssp HHHHHHHHHHHHHHHHCC-----CCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhCCccccccChHHHHHHHHHHHHHHHHHHH
Confidence 3455666677777788899975443344555667777777777653
No 61
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=28.47 E-value=56 Score=20.05 Aligned_cols=39 Identities=13% Similarity=0.132 Sum_probs=26.4
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRAD 125 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~ 125 (172)
.+.+|..++.-||+... .+..+.|.+.|..|++.++...
T Consensus 16 ~~~~r~~~~~~~p~~~~-------~eisk~lg~~Wk~ls~~eK~~y 54 (76)
T 1hry_A 16 SRDQRRKMALENPRMRN-------SEISKQLGYQWKMLTEAEKWPF 54 (76)
T ss_dssp HHHHHHHHHHHCSCCSS-------SHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHCcCCCH-------HHHHHHHHhHHHhCCHHHHHHH
Confidence 45566777778998522 2356889999999986554433
No 62
>4euw_A Transcription factor SOX-9; protein-DNA complex, HMG domain, activator, DNA-binding, NUC transcription; HET: DNA; 2.77A {Homo sapiens}
Probab=27.96 E-value=79 Score=21.06 Aligned_cols=41 Identities=20% Similarity=0.183 Sum_probs=30.0
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYD 127 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD 127 (172)
.+.+|..++.-||+. ...+..+.|.+.|..|++.++....+
T Consensus 41 ~~~~r~~~k~~~P~~-------~~~eisk~lg~~Wk~ls~eeK~~Y~~ 81 (106)
T 4euw_A 41 AQAARRKLADQYPHL-------HNAELSKTLGKLWRLLNESEKRPFVE 81 (106)
T ss_dssp HHHHHHHHHHHCTTS-------CHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 566777888889984 33567888999999999665544443
No 63
>1ckt_A High mobility group 1 protein; high-mobility group domain, BENT DNA, protein-drug-DNA compl regulation-DNA complex; HET: DNA 5IU; 2.50A {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1j3x_A
Probab=27.86 E-value=83 Score=18.88 Aligned_cols=42 Identities=26% Similarity=0.222 Sum_probs=28.3
Q ss_pred HHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHH
Q 030733 81 TAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYD 127 (172)
Q Consensus 81 ~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD 127 (172)
+..|..++.-||+.. ....+..+.|.+.|..|++.++....+
T Consensus 14 ~~~r~~~~~~~p~~~-----~~~~eisk~lg~~Wk~ls~~eK~~y~~ 55 (71)
T 1ckt_A 14 QTCREEHKKKHPDAS-----VNFSEFSKKCSERWKTMSAKEKGKFED 55 (71)
T ss_dssp HHHHHHHHHHCTTCC-----CCHHHHHHHHHHHHHTCCTTTSHHHHH
T ss_pred HHHHHHHHHHCCCCC-----CcHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 345556677789842 123567789999999999876554443
No 64
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=27.34 E-value=1.2e+02 Score=19.03 Aligned_cols=55 Identities=16% Similarity=0.190 Sum_probs=35.0
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHH--HHHHHcCCh-hHHHHHHHHHHh
Q 030733 73 GATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLH--EAYETLSDP-KKRADYDRTLFR 132 (172)
Q Consensus 73 ~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~--~Ay~vLsdp-~~R~~YD~~l~~ 132 (172)
-++.++.+.+|++|....+-+-.- .-. +....|. .-|.+|.++ .++..|+.++..
T Consensus 11 ~~t~eea~~~F~~LL~e~~V~~~~----tWe-~~~~~i~~DpRY~al~~~~eRk~~F~ey~~~ 68 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEKRVPSNA----SWE-QAMKMIINDPRYSALAKLSEKKQAFNAYKVQ 68 (71)
T ss_dssp CCSHHHHHHHHHHHHHHTTCCTTC----CHH-HHHHHHHTSGGGGGCSSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCcCCCC----CHH-HHHHHHccCccccccCCHHHHHHHHHHHHHH
Confidence 468999999999999998654211 111 1122222 267788874 566678887764
No 65
>1xou_B Z5138 gene product; coiled coil, helix bundle, heterodimer, structural protein/chaperone complex; 2.80A {Escherichia coli} SCOP: a.231.1.2
Probab=25.98 E-value=1.4e+02 Score=19.33 Aligned_cols=46 Identities=28% Similarity=0.368 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHHHHh
Q 030733 77 QEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRTLFR 132 (172)
Q Consensus 77 ~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~l~~ 132 (172)
+.||..-.-|..+..-| +.+.+....+.+.|. .-+.|+.||..|..
T Consensus 32 dvvke~v~~l~ekakt~-------pqaae~ln~liegyt---~geerklydsalsk 77 (95)
T 1xou_B 32 DVVKESVNELSEKAKTD-------PQAAEKLNKLIEGYT---YGEERKLYDSALSK 77 (95)
T ss_dssp HHHHHHHHHHHHHHHHC-------HHHHHHHHHHHHHHH---HSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCC-------HHHHHHHHHHHHhhc---chhHHHHHHHHHHH
Confidence 33444444444444433 556666666666665 35789999998864
No 66
>2lef_A LEF-1 HMG, protein (lymphoid enhancer-binding factor); LEF1, HMG, TCR-A, transcription factor; HET: DNA; NMR {Mus musculus} SCOP: a.21.1.1
Probab=25.06 E-value=90 Score=19.69 Aligned_cols=39 Identities=15% Similarity=-0.030 Sum_probs=27.4
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRAD 125 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~ 125 (172)
.+.++..++.-||+. ...+..+.|.+.|..|++.++...
T Consensus 14 ~~~~r~~~~~~~P~~-------~~~eisk~lg~~Wk~ls~eeK~~y 52 (86)
T 2lef_A 14 MKEMRANVVAESTLK-------ESAAINQILGRRWHALSREEQAKY 52 (86)
T ss_dssp HHHHHHHHHHHSSCC-------CHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHHHHCCCC-------CHHHHHHHHHHHHhcCCHHHHHHH
Confidence 345666777778984 344677889999999996654433
No 67
>1cf7_A Protein (transcription factor E2F-4); E2F, winged-helix, DNA-binding domain, cell cycle, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: a.4.5.17
Probab=22.55 E-value=50 Score=21.13 Aligned_cols=44 Identities=27% Similarity=0.268 Sum_probs=30.8
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHHHHHH
Q 030733 73 GATCQEIKTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRADYDRT 129 (172)
Q Consensus 73 ~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~YD~~ 129 (172)
+.+...|.+.|-++.+. +|+.. ..|++|-+.|.-..+|+.||-.
T Consensus 9 ~~SL~~lt~kFi~l~~~-~~~~~------------i~l~~aa~~L~v~~kRRiYDI~ 52 (76)
T 1cf7_A 9 EKSLGLLTTKFVSLLQE-AKDGV------------LDLKLAADTLAVRQKRRIYDIT 52 (76)
T ss_dssp TTCHHHHHHHHHHHHHH-SSTTE------------EEHHHHHHHTTTCCTHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHh-CCCCc------------CcHHHHHHHhCCccceehhhHH
Confidence 45777888888888765 34421 1277788888754799999954
No 68
>3tmm_A Transcription factor A, mitochondrial; HMG, high mobility group, transcription, LSP1, mitochon transcription-DNA complex; HET: DNA; 2.50A {Homo sapiens}
Probab=21.98 E-value=1.3e+02 Score=23.02 Aligned_cols=38 Identities=16% Similarity=0.321 Sum_probs=27.1
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRA 124 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~ 124 (172)
-+.+|..++.-||+. ...+..+.|.+.|..|++.++..
T Consensus 53 ~~e~r~~~k~~~P~~-------~~~eisk~lge~Wk~Ls~~EK~~ 90 (238)
T 3tmm_A 53 SKEQLPIFKAQNPDA-------KTTELIRRIAQRWRELPDSKKKI 90 (238)
T ss_dssp HHHHHHHHHHHSTTS-------CHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHHHhCCCC-------CHHHHHHHHHHHHHhCCHHHHHH
Confidence 345566677889985 24667788889999998765443
No 69
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.89 E-value=1.5e+02 Score=18.53 Aligned_cols=41 Identities=24% Similarity=0.182 Sum_probs=27.9
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRAD 125 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~~ 125 (172)
.+..|..++.-||+.. ....+..+.|.+.|..|++.++...
T Consensus 27 ~~~~r~~~k~~~p~~~-----~~~~eisk~lg~~Wk~ls~~eK~~y 67 (86)
T 2eqz_A 27 VQTCREEHKKKNPEVP-----VNFAEFSKKCSERWKTMSGKEKSKF 67 (86)
T ss_dssp HHHHHHHHHHHCTTSC-----CCHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC-----CcHHHHHHHHHHHHHhCCHHHHHHH
Confidence 3455666777899852 1235677889999999997654443
No 70
>3tq6_A Transcription factor A, mitochondrial; transcription, transcription regulation, mitochondrion; HET: DNA BRU 1PE; 2.45A {Homo sapiens}
Probab=20.68 E-value=1.6e+02 Score=22.24 Aligned_cols=38 Identities=16% Similarity=0.321 Sum_probs=27.2
Q ss_pred HHHHHHHHHhhCCCCcccCCChHHHHHHHHHHHHHHHcCChhHHH
Q 030733 80 KTAYRKLARVLHPDVAAKSQNENSAYKFMKLHEAYETLSDPKKRA 124 (172)
Q Consensus 80 k~ayr~l~~~~HPDk~~~~~~~~~~~~f~~I~~Ay~vLsdp~~R~ 124 (172)
-+..|..++.-||+. ...+..+.|.+.|..|++.++..
T Consensus 21 ~~~~r~~~k~~~P~~-------~~~eisk~lge~Wk~Ls~~EK~~ 58 (214)
T 3tq6_A 21 SKEQLPIFKAQNPDA-------KTTELIRRIAQRWRELPDSKKKI 58 (214)
T ss_dssp HHHHHHHHHHHCTTS-------CHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHHHhCCCC-------CHHHHHHHHHHHHHccCHHhhhH
Confidence 345566777889984 25667788889999998765443
Done!