BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030738
(172 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Marchantia paleacea GN=RBCS PE=2 SV=1
Length = 180
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 85/135 (62%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
Query: 34 WSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFDE 93
W +KT +NGS+ CM+ W P NN KFE LSYLP LS D++AK+IDY++K GW PC+EFD
Sbjct: 45 WQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDV 104
Query: 94 VGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAY-PNAYIRCLAFNN 152
G V RE S MPGYYDGRYWTMWKLPMFGC DS+ +L EI+ECKK Y YIRCL F+N
Sbjct: 105 QGTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDN 164
Query: 153 QKQGQCMSFLIQKPT 167
+Q QC SF++ +PT
Sbjct: 165 TRQVQCASFIVHQPT 179
>sp|P26574|RBS1_SOLTU Ribulose bisphosphate carboxylase small chain 1, chloroplastic
OS=Solanum tuberosum GN=RBCS-1 PE=3 SV=1
Length = 181
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/155 (58%), Positives = 118/155 (76%), Gaps = 6/155 (3%)
Query: 15 YLGLKPTSKALLPV--KDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDS 72
+ GLK S A PV K ++ +S SNG + RCM+ W PIN KK+E LSYLP L+D+
Sbjct: 27 FTGLK--SAATFPVSRKQNLDITS-IASNGGRVRCMQVWPPINMKKYETLSYLPDLTDEQ 83
Query: 73 IAKEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILN 131
+ KE++Y+LK GW+PCLEF+ E G+V+REN K PGYYDGRYWTMWKLPMFGC D++Q+L
Sbjct: 84 LLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLA 143
Query: 132 EIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
E+QECKK+YP A+IR + F+N +Q QC+SF+ KP
Sbjct: 144 EVQECKKSYPQAWIRIIGFDNVRQVQCISFIAYKP 178
>sp|P26577|RBSC_SOLTU Ribulose bisphosphate carboxylase small chain 2C, chloroplastic
OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1
Length = 180
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 117/153 (76%), Gaps = 2/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK T+ + K ++ +S SNG + RCM+ W PIN KK+E LSYLP LSD+ +
Sbjct: 26 FTGLKSTASFPVSRKQNLDITS-IASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLL 84
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
KE++Y+LK GW+PCLEF+ E G+V+REN+K PGYYDGRYWTMWKLPMFGC D++Q+L E+
Sbjct: 85 KEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
+E KKAYP A+IR + F+N +Q QC+SF+ KP
Sbjct: 145 EEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
>sp|P26576|RBSB_SOLTU Ribulose bisphosphate carboxylase small chain 2B, chloroplastic
OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1
Length = 180
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 117/153 (76%), Gaps = 2/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK T+ + K ++ +S SNG + RCM+ W PIN KK+E LSYLP LSD+ +
Sbjct: 26 FTGLKSTASFPVSRKQNLDITS-IASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLL 84
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
KE++Y+LK GW+PCLEF+ E G+V+REN+K PGYYDGRYWTMWKLPMFGC D++Q+L E+
Sbjct: 85 KEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
+E KKAYP A+IR + F+N +Q QC+SF+ KP
Sbjct: 145 EEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
>sp|P32764|RBS3_SOLTU Ribulose bisphosphate carboxylase small chain 3, chloroplastic
OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1
Length = 181
Score = 196 bits (499), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 86/153 (56%), Positives = 114/153 (74%), Gaps = 1/153 (0%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK + + K++ + SNG + RCM+ W PIN KK+E LSYLP LSD+ +
Sbjct: 26 FTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLL 85
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
KE++Y+LK GW+PCLEF+ E G+V+REN K PGYYDGRYWTMWKLPMFGC D++Q+L E+
Sbjct: 86 KEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 145
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
QE KKAYP A+IR + F+N +Q QC+SF+ KP
Sbjct: 146 QEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 178
>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Capsicum annuum GN=RBCS PE=2 SV=1
Length = 187
Score = 196 bits (499), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 116/158 (73%), Gaps = 2/158 (1%)
Query: 13 SGYLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDS 72
+ + GLK + + K + +S SNG + CM W PIN KK+E LSYLP LSD+
Sbjct: 24 ASFNGLKSAASFPVTRKQDLDITS-IASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQ 82
Query: 73 IAKEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILN 131
+ KEI+Y+L+KGW+PCLEF+ E G+V+RE+ + PGYYDGRYWTMWKLPMFGC D++Q+LN
Sbjct: 83 LLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLN 142
Query: 132 EIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKPTTT 169
E+QE KKAYP A+IR + F+N +Q QC+SF+ KP T
Sbjct: 143 EVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEAT 180
>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Larix laricina GN=RBCS PE=3 SV=1
Length = 189
Score = 196 bits (497), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 112/159 (70%), Gaps = 7/159 (4%)
Query: 13 SGYLGLKPTSKALLPVKDSIA-----WSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPS 67
S + GLK S A P +++ W KT SNGS+ RCM+ W P NKKFE LSYLP
Sbjct: 30 SAFTGLK--SMAQFPSSKTMSNAGAEWEQKTTSNGSRVRCMQVWPPYANKKFETLSYLPR 87
Query: 68 LSDDSIAKEIDYMLKKGWIPCLEFDEVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSS 127
L+ + + KE++Y+LK W+PCLEF+E G + R PGYYDGRYW MWKLPMFGC ++S
Sbjct: 88 LTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKRVYGNSPGYYDGRYWVMWKLPMFGCTEAS 147
Query: 128 QILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
Q+LNE+ EC KAYPNA+IR + F+N +Q QC+SF++ KP
Sbjct: 148 QVLNEVNECAKAYPNAFIRVIGFDNVRQVQCISFIVHKP 186
>sp|P26575|RBSA_SOLTU Ribulose bisphosphate carboxylase small chain 2A, chloroplastic
OS=Solanum tuberosum GN=RBCS-2A PE=3 SV=1
Length = 180
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 86/153 (56%), Positives = 116/153 (75%), Gaps = 2/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK + + K ++ +S SNG + RCM+ W PIN KK+E LSYLP LSD+ +
Sbjct: 26 FTGLKSAASFPVSRKQNLDITS-IASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLL 84
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
KE++Y+LK GW+PCLEF+ E G+V+REN+K PGYYDGRYWTMWKLPMFGC D++Q+L E+
Sbjct: 85 KEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
+E KKAYP A+IR + F+N +Q QC+SF+ KP
Sbjct: 145 EEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
>sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Flaveria trinervia GN=RBCS PE=2 SV=1
Length = 173
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 113/154 (73%), Gaps = 3/154 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK + A PV + S SNG + +CMK W P+ KK+E LSYLP L++ +A
Sbjct: 20 FTGLK--ANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGKKKYETLSYLPELTEAQLA 77
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
KE+DY+L+ W+PCLEF+ E G+V+REN+ PGYYDGRYWTMWKLPMFGC DS+Q++ E+
Sbjct: 78 KEVDYLLRNKWVPCLEFELEHGFVYRENASSPGYYDGRYWTMWKLPMFGCTDSAQVMKEL 137
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKPT 167
QECKK YP A+IR + F+N +Q QC+SF+ KPT
Sbjct: 138 QECKKEYPQAWIRIIGFDNVRQVQCVSFIASKPT 171
>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Pinus thunbergii GN=RBCS PE=2 SV=1
Length = 171
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 114/157 (72%), Gaps = 3/157 (1%)
Query: 13 SGYLGLKPTSKALLPVKDSIA---WSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLS 69
S + GLK T++ K S A W KT SNG + RCM+ W P N KFE LSYLP+L+
Sbjct: 14 SAFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLT 73
Query: 70 DDSIAKEIDYMLKKGWIPCLEFDEVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQI 129
++ + KE++Y+L+ W+PCLEFD G + R+ ++ PGYYDGRYW MWKLPMFGC ++SQ+
Sbjct: 74 EEQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQV 133
Query: 130 LNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
+NE++EC KAYP A+IR + F+N +Q QC+SF++ KP
Sbjct: 134 INEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170
>sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small chain 3B, chloroplastic
OS=Arabidopsis thaliana GN=RBCS-3B PE=1 SV=2
Length = 181
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 120/174 (68%), Gaps = 7/174 (4%)
Query: 2 SASIFTAPVAGS---GYLGLKPTSKALLPVKDSIAWSSKTV-SNGSKTRCMKTWNPINNK 57
SA++ T+P + + GLK S A PV ++ SNG + CMK W PI K
Sbjct: 8 SAAVVTSPAQATMVAPFTGLK--SSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65
Query: 58 KFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMW 116
KFE LSYLP LSD +AKE+DY+L+ WIPC+EF+ E G+V+RE+ PGYYDGRYWTMW
Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMW 125
Query: 117 KLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKPTTTT 170
KLP+FGC DS+Q+L E++ECKK YP A+IR + F+N +Q QC+SF+ KP + T
Sbjct: 126 KLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFT 179
>sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Raphanus sativus GN=RBCS PE=2 SV=1
Length = 181
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 121/174 (69%), Gaps = 7/174 (4%)
Query: 2 SASIFTAPVAGS---GYLGLKPTSKALLPV-KDSIAWSSKTVSNGSKTRCMKTWNPINNK 57
SA++ T+ + + + GLK S A PV + + + SNG + CMK W PI K
Sbjct: 8 SAAVVTSQLQATMVAPFTGLK--SSAAFPVTRKTNTDITSIASNGGRVSCMKVWPPIGKK 65
Query: 58 KFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMW 116
KFE LSYLP LSD +AKE+DY+L+ WIPC+EF+ E G+V+RE+ PGYYDGRYWTMW
Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMW 125
Query: 117 KLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKPTTTT 170
KLP+FGC DS+Q+L E+QECKK YPNA IR + F+N +Q QC+SF+ KP + T
Sbjct: 126 KLPLFGCTDSAQVLKEVQECKKEYPNALIRIIGFDNNRQVQCISFIAYKPPSFT 179
>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
Length = 183
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 86/152 (56%), Positives = 112/152 (73%), Gaps = 3/152 (1%)
Query: 17 GLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIAKE 76
GLK S + PV + SNG + +CM+ W P+ KKFE LSYLP LS +S+AKE
Sbjct: 32 GLK--SSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89
Query: 77 IDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQE 135
+DY+L+K W+PCLEF+ E G+V+REN + PGYYDGRYWTMWKLPMFGC DSSQ+L E++E
Sbjct: 90 VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEE 149
Query: 136 CKKAYPNAYIRCLAFNNQKQGQCMSFLIQKPT 167
KKAYP ++IR + F+N +Q QC+SF+ KP
Sbjct: 150 AKKAYPQSFIRIIGFDNVRQVQCISFIAYKPA 181
>sp|Q39749|RBS7_FLAPR Ribulose bisphosphate carboxylase small chain 7, chloroplastic
OS=Flaveria pringlei GN=RBCS7 PE=2 SV=1
Length = 173
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 114/153 (74%), Gaps = 3/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK S A PV + S SNG + +CMK W P+ K++E LSYLP+L++ +A
Sbjct: 20 FTGLK--SNAAFPVTKKVNDFSTLASNGGRVQCMKVWPPLGKKRYETLSYLPNLTEVQLA 77
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
KE+DY+L+ W+PCLEF+ E G+V+REN++ PGYYDGRYWTMWKLPMFGC DS+Q++ E+
Sbjct: 78 KEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKEL 137
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
QECKK YP A+IR + F+N +Q QC+SF+ KP
Sbjct: 138 QECKKEYPQAWIRIIGFDNVRQVQCISFIASKP 170
>sp|P12468|RBS4_SOYBN Ribulose bisphosphate carboxylase small chain 4, chloroplastic
OS=Glycine max GN=RBCS-4 PE=3 SV=1
Length = 178
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 121/170 (71%), Gaps = 7/170 (4%)
Query: 2 SASIFTAPVAGSG----YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNK 57
S ++ T AG+G + GLK S A LP + + + SNG + +CM+ W P+ K
Sbjct: 8 SPAVTTVNRAGAGMVAPFTGLK--SMAGLPTRKTNNDITSIASNGGRVQCMQVWPPVGKK 65
Query: 58 KFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMW 116
KFE LSYLP L D +AKE++Y+L+KGWIPCLEF+ E G+V+RE+++ GYYDGRYWTMW
Sbjct: 66 KFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSLGYYDGRYWTMW 125
Query: 117 KLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
KLPMFGC D+SQ+L E+QE K AYPN +IR + F+N +Q QC+SF+ KP
Sbjct: 126 KLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175
>sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Malus sp. GN=RBCS PE=2 SV=1
Length = 183
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 114/154 (74%), Gaps = 3/154 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK +S + PV + SNG + +CM+ W P+ KKFE LSYLP LS +S+A
Sbjct: 30 FTGLKSSSAS--PVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLA 87
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
KE+DY+L+K W+PCLEF+ E G+V+REN + PGYYDGRYWTMWKLPMFGC DSSQ+L E+
Sbjct: 88 KEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKEL 147
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKPT 167
+E KKAYP ++IR + F+N +Q QC+SF+ KP
Sbjct: 148 EEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPA 181
>sp|P00865|RBS1_SOYBN Ribulose bisphosphate carboxylase small chain 1, chloroplastic
OS=Glycine max GN=RBCS-1 PE=3 SV=1
Length = 178
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 120/170 (70%), Gaps = 7/170 (4%)
Query: 2 SASIFTAPVAGSG----YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNK 57
S ++ T AG+G + GLK S A P + + + SNG + +CM+ W PI K
Sbjct: 8 SPAVTTVNRAGAGMVAPFTGLK--SMAGFPTRKTNNDITSIASNGGRVQCMQVWPPIGKK 65
Query: 58 KFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMW 116
KFE LSYLP L D +AKE++Y+L+KGWIPCLEF+ E G+V+RE+++ P YYDGRYWTMW
Sbjct: 66 KFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPXYYDGRYWTMW 125
Query: 117 KLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
KLPMFGC D+SQ+L E+QE K AYPN +IR + F+N +Q QC+SF+ KP
Sbjct: 126 KLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175
>sp|P05349|RBS3B_SOLLC Ribulose bisphosphate carboxylase small chain 3B, chloroplastic
OS=Solanum lycopersicum GN=RBCS-3B PE=3 SV=1
Length = 180
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 86/153 (56%), Positives = 114/153 (74%), Gaps = 2/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK T+ + K ++ +S SNG + CM+ W PIN KK+E LSYLP LSD+ +
Sbjct: 26 FTGLKSTASFPVSRKQNLDITS-IASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLL 84
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
EI+Y+LK GW+PCLEF+ E G+V+REN K PGYYDGRYWTMWKLPMFGC D++Q+L E+
Sbjct: 85 SEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
QE KKAYP A++R + F+N +Q QC+SF+ KP
Sbjct: 145 QEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKP 177
>sp|Q39745|RBS3_FLAPR Ribulose bisphosphate carboxylase small chain 3, chloroplastic
OS=Flaveria pringlei GN=RBCS3 PE=2 SV=1
Length = 173
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 114/153 (74%), Gaps = 3/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK S A PV + S SNG + +CMK W P+ K++E LSYLP+L++ +A
Sbjct: 20 FTGLK--SNAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKRYETLSYLPNLTESQLA 77
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
KE+DY+L+ W+PCLEF+ E G+V+REN++ PGYYDGRYWTMWKLPMFGC DS+Q++ E+
Sbjct: 78 KEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKEL 137
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
QECKK YP A+IR + F+N +Q QC+SF+ KP
Sbjct: 138 QECKKEYPQAWIRIIGFDNVRQVQCISFIASKP 170
>sp|P07180|RBS3A_SOLLC Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic
OS=Solanum lycopersicum GN=RBCS-3A/3C PE=3 SV=1
Length = 180
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 86/153 (56%), Positives = 114/153 (74%), Gaps = 2/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK T+ + K ++ +S SNG + CM+ W PIN KK+E LSYLP LSD+ +
Sbjct: 26 FTGLKSTASFPVSRKQNLDITS-IASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLL 84
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
EI+Y+LK GW+PCLEF+ E G+V+REN K PGYYDGRYWTMWKLPMFGC D++Q+L E+
Sbjct: 85 SEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
QE KKAYP A++R + F+N +Q QC+SF+ KP
Sbjct: 145 QEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKP 177
>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zea
mays GN=RBCS PE=1 SV=1
Length = 170
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 115/160 (71%), Gaps = 2/160 (1%)
Query: 7 TAPVAGSGYLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLP 66
++ A + + GLK S A LPV + S VSNG + RCM+ W NKKFE LSYLP
Sbjct: 9 SSATAVAPFQGLK--STASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLP 66
Query: 67 SLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDS 126
LS D + K++DY+L+ GWIPCLEF +VG+V+RENS P YYDGRYWTMWKLPMFGCND+
Sbjct: 67 PLSTDDLLKQVDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDA 126
Query: 127 SQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
+Q+ E+QE K+YP+A+ R + F+N KQ QC+SF+ KP
Sbjct: 127 TQVYKELQEAIKSYPDAFHRVIGFDNIKQTQCVSFIAYKP 166
>sp|Q42823|RBS_GLYTA Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Glycine tabacina GN=RBCS PE=3 SV=1
Length = 178
Score = 193 bits (490), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 123/177 (69%), Gaps = 13/177 (7%)
Query: 1 MSASIFTAPV------AGSG----YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKT 50
M++S+ ++P AG+G + GLK S A P + + + SNG + +CM+
Sbjct: 1 MASSMISSPAVTTVNRAGAGTVAPFTGLK--SMAGFPTRKTNNDIASIASNGGRVQCMQV 58
Query: 51 WNPINNKKFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYD 109
W KKFE LSYLP L D +AKE++Y+L+KGWIPCLEF+ E G+V+RE+ + PGYYD
Sbjct: 59 WPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHHRSPGYYD 118
Query: 110 GRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
GRYWTMWKLPMFGC D+SQ+L E+QE K AYPNA+IR + F+N +Q QC+SF+ KP
Sbjct: 119 GRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNAFIRIIGFDNVRQVQCISFIAYKP 175
>sp|Q39747|RBS5_FLAPR Ribulose bisphosphate carboxylase small chain 5, chloroplastic
OS=Flaveria pringlei GN=RBCS5 PE=2 SV=1
Length = 173
Score = 192 bits (489), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 114/153 (74%), Gaps = 3/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK S A PV + S SNG + +CMK W P+ K++E LSYLP+L++ +A
Sbjct: 20 FTGLK--SNAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKRYETLSYLPNLTEVQLA 77
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
KE+DY+L+ W+PCLEF+ E G+V+REN++ PGYYDGRYWTMWKLPMFGC DS+Q++ E+
Sbjct: 78 KEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKEL 137
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
QECKK YP A+IR + F+N +Q QC+SF+ KP
Sbjct: 138 QECKKEYPQAWIRIIGFDNVRQVQCISFIASKP 170
>sp|P07179|RBS2A_SOLLC Ribulose bisphosphate carboxylase small chain 2A, chloroplastic
OS=Solanum lycopersicum GN=RBCS-2A PE=2 SV=2
Length = 180
Score = 192 bits (489), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 116/155 (74%), Gaps = 6/155 (3%)
Query: 15 YLGLKPTSKALLPV--KDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDS 72
+ GLK S A PV K ++ +S SNG + CM+ W PIN KK+E LSYLP LSD+
Sbjct: 26 FTGLK--SSATFPVTKKQNLDITS-IASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQ 82
Query: 73 IAKEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILN 131
+ EI+Y+LK GW+PCLEF+ E G+V+REN+K PGYYDGRYWTMWKLPMFGC D++Q+L
Sbjct: 83 LLSEIEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLA 142
Query: 132 EIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
E+QE KKAYP A++R + F+N +Q QC+SF+ KP
Sbjct: 143 EVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKP 177
>sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small chain 1, chloroplastic
OS=Flaveria pringlei GN=RBCS1 PE=2 SV=1
Length = 173
Score = 192 bits (488), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK + A PV + S SNG + +CMK W P+ KK+E LSYLP L++ +A
Sbjct: 20 FTGLK--ANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKKYETLSYLPDLTEVQLA 77
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
KE+DY+L+ W+PCLEF+ E G+V+REN++ PGYYDGRYWTMWKLPMFGC DS+Q++ E+
Sbjct: 78 KEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKEL 137
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
QECKK YP A+IR + F+N +Q QC+SF+ KP
Sbjct: 138 QECKKEYPQAWIRIIGFDNVRQVQCISFIASKP 170
>sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small chain 1B, chloroplastic
OS=Arabidopsis thaliana GN=RBCS-1B PE=1 SV=1
Length = 181
Score = 192 bits (488), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 120/174 (68%), Gaps = 7/174 (4%)
Query: 2 SASIFTAPVAGS---GYLGLKPTSKALLPVKDSIAWSSKTV-SNGSKTRCMKTWNPINNK 57
SA++ T+P + + GLK S A PV ++ SNG + CMK W PI K
Sbjct: 8 SAAVVTSPAQATMVAPFTGLK--SSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKK 65
Query: 58 KFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMW 116
KFE LSYLP L+D +AKE+DY+L+ WIPC+EF+ E G+V+RE+ PGYYDGRYWTMW
Sbjct: 66 KFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMW 125
Query: 117 KLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKPTTTT 170
KLP+FGC DS+Q+L E++ECKK YP A+IR + F+N +Q QC+SF+ KP + T
Sbjct: 126 KLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFT 179
>sp|P08706|RBS1_SOLLC Ribulose bisphosphate carboxylase small chain 1, chloroplastic
OS=Solanum lycopersicum GN=RBCS-1 PE=2 SV=2
Length = 181
Score = 192 bits (488), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK + + K++ + SNG + RCM+ W PIN KK+E LSYLP LSD+ +
Sbjct: 26 FTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLL 85
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
EI+Y+LK GW+PCLEF+ E G+V+REN+ PGYYDGRYWTMWKLPMFGC D++Q+L E+
Sbjct: 86 SEIEYLLKNGWVPCLEFETERGFVYRENNSSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 145
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
QE KKAYP A++R + F+N +Q QC+SF+ KP
Sbjct: 146 QEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKP 178
>sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Brassica napus GN=RBCS PE=2 SV=2
Length = 181
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 120/173 (69%), Gaps = 5/173 (2%)
Query: 2 SASIFTAPVAGS---GYLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKK 58
SA++ T+P + + GLK +S A + + + VSNG + CMK W P+ KK
Sbjct: 8 SAAVVTSPAQATMVAPFTGLK-SSSAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKKK 66
Query: 59 FEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWK 117
FE LSYLP L++ + KE+DY+L+ WIPC+EF+ E G+V+RE+ PGYYDGRYWTMWK
Sbjct: 67 FETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWK 126
Query: 118 LPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKPTTTT 170
LP+FGC DS+Q+L E+QECK YPNA+IR + F+N +Q QC+SF+ KP + T
Sbjct: 127 LPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT 179
>sp|P22433|RBS2_NICSY Ribulose bisphosphate carboxylase small chain S41, chloroplastic
OS=Nicotiana sylvestris PE=3 SV=1
Length = 181
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 116/153 (75%), Gaps = 2/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK + + K ++ +S SNG + +CM+ W PIN KK+E LSYLP LS++ +
Sbjct: 27 FTGLKSATSFPVSRKQNLDITS-IASNGGRVQCMQVWPPINKKKYETLSYLPDLSEEQLL 85
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
+E++Y+LK GW+PCLEF+ E G+V+REN+K PGYYDGRYWTMWKLPMFGC D++Q+L E+
Sbjct: 86 REVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 145
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
+E KKAYP A+IR + F+N +Q QC+SF+ KP
Sbjct: 146 EEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 178
>sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small chain 2B, chloroplastic
OS=Arabidopsis thaliana GN=RBCS-2B PE=2 SV=2
Length = 181
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 119/174 (68%), Gaps = 7/174 (4%)
Query: 2 SASIFTAPVAGS---GYLGLKPTSKALLPVKDSIAWSSKTV-SNGSKTRCMKTWNPINNK 57
S ++ T+P + + GLK S A PV ++ SNG + CMK W PI K
Sbjct: 8 STAVVTSPAQATMVAPFTGLK--SSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKK 65
Query: 58 KFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMW 116
KFE LSYLP LSD +AKE+DY+L+ WIPC+EF+ E G+V+RE+ PGYYDGRYWTMW
Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMW 125
Query: 117 KLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKPTTTT 170
KLP+FGC DS+Q+L E++ECKK YP A+IR + F+N +Q QC+SF+ KP + T
Sbjct: 126 KLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFT 179
>sp|Q42822|RBS_GLYTO Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Glycine tomentella GN=RBCS PE=3 SV=1
Length = 178
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 122/177 (68%), Gaps = 13/177 (7%)
Query: 1 MSASIFTAPV------AGSG----YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKT 50
M++S+ ++P AG+G + GLK S A P + + + SNG + +CM+
Sbjct: 1 MASSMISSPAVTTVNRAGAGTVAPFTGLK--SMAGFPTRKTNNDIASIASNGGRVQCMQV 58
Query: 51 WNPINNKKFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYD 109
W KKFE LSYLP L D +AKE++Y+L+KGWIPCLEF+ E G+V+REN + PGYYD
Sbjct: 59 WPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYRENHRSPGYYD 118
Query: 110 GRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
GRYWTMWKLP+FGC D+SQ+L E+QE K AYPN +IR + F+N +Q QC+SF+ KP
Sbjct: 119 GRYWTMWKLPVFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175
>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Zantedeschia aethiopica GN=RBCS PE=2 SV=1
Length = 178
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 83/145 (57%), Positives = 105/145 (72%)
Query: 22 SKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIAKEIDYML 81
S A PV A SSK SNG + RCM+ W P KKFE LSYLP L+ + + +E+DY++
Sbjct: 31 SSAAFPVTRKFADSSKLPSNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLI 90
Query: 82 KKGWIPCLEFDEVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYP 141
+ GWIPC+EF +VG+V+RE PGYYDGRYWTMWKLPMFGC DSSQ+L E+ EC KAYP
Sbjct: 91 RNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYP 150
Query: 142 NAYIRCLAFNNQKQGQCMSFLIQKP 166
+ + R + F+N +Q QC+SFL KP
Sbjct: 151 DYFNRIIGFDNTRQVQCISFLTYKP 175
>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 104/128 (81%), Gaps = 1/128 (0%)
Query: 40 SNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFD-EVGYVH 98
SNG + +CMK W PI KK+E LSYLP LSD++++KEIDY+++ WIPCLEF+ E G+V+
Sbjct: 50 SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVY 109
Query: 99 RENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQC 158
RE+ PGYYDGRYWTMWKLPMFGC DS+Q++ E+ ECKK YPNA+IR + F+N +Q QC
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQC 169
Query: 159 MSFLIQKP 166
+SF++ KP
Sbjct: 170 ISFIVAKP 177
>sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small chain 4, chloroplastic
OS=Flaveria pringlei GN=RBCS4 PE=2 SV=1
Length = 178
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 112/153 (73%), Gaps = 3/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK S A P S SNG + +CMK W P+ KK+E LSYLP+L++ +A
Sbjct: 25 FTGLK--SNAAFPATKKANDFSTLPSNGGRVQCMKVWPPLGKKKYETLSYLPNLTEAQLA 82
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
KE+DY+L+ W+PCLEF+ E G+V+REN++ PGYYDGRYWTMWKLPMFGC DS+Q++ E+
Sbjct: 83 KEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKEL 142
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
QECKK YP A+IR + F+N +Q QC+SF+ KP
Sbjct: 143 QECKKEYPQAWIRIIGFDNVRQVQCISFIASKP 175
>sp|P27985|RBS2_BRANA Ribulose bisphosphate carboxylase small chain F1, chloroplastic
OS=Brassica napus GN=RBCS F1 PE=3 SV=1
Length = 181
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 120/174 (68%), Gaps = 7/174 (4%)
Query: 2 SASIFTAPVAGS---GYLGLKPTSKALLPV-KDSIAWSSKTVSNGSKTRCMKTWNPINNK 57
SA++ T+P + + GLK S A PV + + + SNG + CMK W P+ K
Sbjct: 8 SAAVVTSPAQATMVAPFTGLK--SSAAFPVTRKANNDITSIASNGGRVSCMKVWPPVGKK 65
Query: 58 KFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMW 116
KFE LSYLP L++ + KE+DY+L+ WIPC+EF+ E G+V+RE+ PGYYDGRYWTMW
Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMW 125
Query: 117 KLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKPTTTT 170
KLP+FGC DS+Q+L E+QECK YPNA+IR + F+N +Q QC+SF+ KP + T
Sbjct: 126 KLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT 179
>sp|P10647|RBS0_SOLTU Ribulose bisphosphate carboxylase small chain C, chloroplastic
OS=Solanum tuberosum GN=RBCS-C PE=2 SV=1
Length = 181
Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK + + K++ + SNG + RCM+ W PIN KK+E LSYLP LSD+ +
Sbjct: 26 FTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLL 85
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
KE++Y+LK GW+PCLEF+ E G+V+RE++ PGYYDGRYWTMWKLPMFGC D +Q+L E+
Sbjct: 86 KEVEYLLKNGWVPCLEFETEHGFVYREHNSSPGYYDGRYWTMWKLPMFGCTDGTQVLAEV 145
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
QE K AYP A+IR + F+N +Q QC+SF+ KP
Sbjct: 146 QEAKNAYPQAWIRIIGFDNVRQVQCISFIAYKP 178
>sp|P69249|RBS_TOBAC Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Nicotiana tabacum GN=RBCS PE=1 SV=1
Length = 180
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 114/153 (74%), Gaps = 2/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK + + K ++ +S SNG + +CM+ W PIN KK+E LSYLP LS + +
Sbjct: 26 FTGLKSAASFPVSRKQNLDITS-IASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLL 84
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
E++Y+LK GW+PCLEF+ E G+V+REN+K PGYYDGRYWTMWKLPMFGC D++Q+L E+
Sbjct: 85 SEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
+E KKAYP A+IR + F+N +Q QC+SF+ KP
Sbjct: 145 EEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
>sp|P69250|RBS1_NICSY Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Nicotiana sylvestris GN=RBCS PE=2 SV=1
Length = 180
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 114/153 (74%), Gaps = 2/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK + + K ++ +S SNG + +CM+ W PIN KK+E LSYLP LS + +
Sbjct: 26 FTGLKSAASFPVSRKQNLDITS-IASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLL 84
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
E++Y+LK GW+PCLEF+ E G+V+REN+K PGYYDGRYWTMWKLPMFGC D++Q+L E+
Sbjct: 85 SEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
+E KKAYP A+IR + F+N +Q QC+SF+ KP
Sbjct: 145 EEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
>sp|Q41351|RBS_STELP Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Stellaria longipes GN=RBCS PE=2 SV=1
Length = 180
Score = 189 bits (481), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 112/154 (72%), Gaps = 4/154 (2%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTV-SNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSI 73
+ GLK S A PV ++ SNG + RCM+ W PIN KK+E LSYLP LS + +
Sbjct: 26 FTGLK--SNASFPVSRKTNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSSEQL 83
Query: 74 AKEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNE 132
EI+Y+LK GW+PCLEF+ E G+V+RE++ PGYYDGRYWTMWKLPMFGC D++Q+ E
Sbjct: 84 LSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAE 143
Query: 133 IQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
+QE KKAYP+A+IR + F+N +Q QC+SF+ KP
Sbjct: 144 VQEAKKAYPDAHIRIIGFDNVRQVQCISFIAYKP 177
>sp|Q96542|RBS_BETPN Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Betula pendula GN=RBCS1 PE=2 SV=1
Length = 182
Score = 189 bits (480), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 107/132 (81%), Gaps = 1/132 (0%)
Query: 36 SKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFD-EV 94
+ SNG + +CM+ W P+ KKFE LSYLP LS + +AKE+DY+L+K IPCLEF+ E
Sbjct: 48 TSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEH 107
Query: 95 GYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQK 154
G+V+RE+++ PGYYDGRYWTMWKLPMFGCNDSSQ+L E++ECKKAYP+A+IR + F+N++
Sbjct: 108 GFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKR 167
Query: 155 QGQCMSFLIQKP 166
Q Q +SF+ KP
Sbjct: 168 QVQIISFIAYKP 179
>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic
OS=Triticum aestivum PE=3 SV=2
Length = 174
Score = 189 bits (480), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 113/152 (74%), Gaps = 2/152 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK T A LPV S +VSNG + RCM+ W KKFE LSYLP LS ++++
Sbjct: 16 FQGLKST--AGLPVSRRSRGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALS 73
Query: 75 KEIDYMLKKGWIPCLEFDEVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQ 134
K++DY+++ W+PCLEF +VG+V RE++ PGYYDGRYWTMWKLPMFGC D++Q+LNE++
Sbjct: 74 KQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVE 133
Query: 135 ECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
E KK YP+AY+R + F+N +Q QC+SF+ +P
Sbjct: 134 EVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 165
>sp|Q39748|RBS6_FLAPR Ribulose bisphosphate carboxylase small chain 6, chloroplastic
OS=Flaveria pringlei GN=RBCS6 PE=2 SV=1
Length = 173
Score = 189 bits (480), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 112/153 (73%), Gaps = 3/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK + A PV + S SNG + +CMK W P+ KK+ LSYLP+L++ +A
Sbjct: 20 FTGLK--ANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKKYXTLSYLPNLTEAQLA 77
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
KE+DY+L+ W+PCLEF+ E G+V+REN++ PGYYDGRYWTMWKLPMFGC DS Q++ E+
Sbjct: 78 KEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSVQVMKEL 137
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
QECKK YP A+IR + F+N +Q QC+SF+ KP
Sbjct: 138 QECKKEYPQAWIRIIGFDNVRQVQCISFIASKP 170
>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain 1A, chloroplastic
OS=Arabidopsis thaliana GN=RBCS-1A PE=1 SV=2
Length = 180
Score = 189 bits (480), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 103/132 (78%), Gaps = 1/132 (0%)
Query: 40 SNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFD-EVGYVH 98
SNG + CM+ W PI KKFE LSYLP L+D +AKE+DY+++ WIPC+EF+ E G+V+
Sbjct: 48 SNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVY 107
Query: 99 RENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEIQECKKAYPNAYIRCLAFNNQKQGQC 158
RE+ PGYYDGRYWTMWKLP+FGC DS+Q+L E++ECKK YPNA+IR + F+N +Q QC
Sbjct: 108 REHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQC 167
Query: 159 MSFLIQKPTTTT 170
+SF+ KP + T
Sbjct: 168 ISFIAYKPPSFT 179
>sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small chain 2, chloroplastic
OS=Fritillaria agrestis GN=RBCS2 PE=2 SV=1
Length = 179
Score = 189 bits (479), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 114/153 (74%), Gaps = 3/153 (1%)
Query: 15 YLGLKPTSKALLPV-KDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSI 73
++GLK S + PV + ++ S SNG + +CMK W + KKFE LSYLP+LS +S+
Sbjct: 28 FVGLK--SASAFPVTQKTVTGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESL 85
Query: 74 AKEIDYMLKKGWIPCLEFDEVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
K+I+Y+++ GW+PCLEF G+V R+N+K PGYYDGRYWTMWKLPMFGC D++Q++ E
Sbjct: 86 LKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEA 145
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
ECKK YP A+IR + F+N +Q QC+SF+++KP
Sbjct: 146 AECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
>sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small chain 1/4, chloroplastic
OS=Fritillaria agrestis GN=RBCS1 PE=2 SV=1
Length = 179
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTV-SNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSI 73
++GLK TS PV A T+ SNG + +CMK W + KKFE LSYLP+LS +S+
Sbjct: 28 FVGLKSTSA--FPVTQKPATGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESL 85
Query: 74 AKEIDYMLKKGWIPCLEFDEVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
K+I+Y+++ GW+PCLEF G+V R+N+K PGYYDGRYWTMWKLPMFGC D++Q++ E
Sbjct: 86 LKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEA 145
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
ECKK YP A+IR + F+N +Q QC+SF++++P
Sbjct: 146 AECKKEYPAAFIRVIGFDNVRQVQCVSFIVERP 178
>sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small chain 2, chloroplastic
OS=Flaveria pringlei GN=RBCS2 PE=2 SV=1
Length = 178
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 111/153 (72%), Gaps = 3/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK S P S SNG + +CMK W P+ K++E LSYLP+L++ +A
Sbjct: 25 FTGLK--SNVAFPATKKANDFSTLPSNGGRVQCMKVWPPLGKKRYETLSYLPNLTEAQLA 82
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
KE+DY+L+ W+PCLEF+ E G+V+REN++ PGYYDGRYWTMWKLPMFGC DS+Q++ E+
Sbjct: 83 KEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKEL 142
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
QECKK YP A+IR + F+N +Q QC+SF+ KP
Sbjct: 143 QECKKEYPQAWIRIIGFDNVRQVQCISFIASKP 175
>sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small chain 3, chloroplastic
OS=Fritillaria agrestis GN=RBCS3 PE=2 SV=1
Length = 179
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTV-SNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSI 73
++GLK S + PV A T+ SNG + +CMK W + KKFE LSYLP+LS +S+
Sbjct: 28 FVGLK--SASAFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESL 85
Query: 74 AKEIDYMLKKGWIPCLEFDEVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
K+I+Y+++ GW+PCLEF G+V R+N+K PGYYDGRYWTMWKLPMFGC D++Q++ E
Sbjct: 86 LKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEA 145
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
ECKK YP A+IR + F+N +Q QC+SF+++KP
Sbjct: 146 AECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
>sp|P18960|RBS_SILPR Ribulose bisphosphate carboxylase small chain, chloroplastic
OS=Silene pratensis GN=RBCS PE=2 SV=1
Length = 177
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 117/154 (75%), Gaps = 4/154 (2%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK TS + K ++ +S +NG + CM+ W P N KKFE LSYLP+LS++S+
Sbjct: 25 FSGLKSTSAFPVSRKSNVDITS-LATNGGRVNCMQVWPPRNLKKFETLSYLPTLSEESLL 83
Query: 75 KEIDYMLKKGWIPCLEFDEVG--YVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNE 132
KEI+Y+L KGW+PCLEF EVG +V+REN+K PGYYDGRYWTMWKLPMFGC D+SQ+ E
Sbjct: 84 KEINYLLIKGWVPCLEF-EVGPAHVYRENNKSPGYYDGRYWTMWKLPMFGCTDASQVAAE 142
Query: 133 IQECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
+ ECK AYP+A++R + F+N++Q QC+SF+ KP
Sbjct: 143 VVECKNAYPDAHVRIIGFDNKRQVQCISFIAYKP 176
>sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small chain 8B, chloroplastic
OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1
Length = 180
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 112/153 (73%), Gaps = 2/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTVSNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSIA 74
+ GLK + + K ++ +S SNG + +CM+ W PIN KK+E LSYLP LS + +
Sbjct: 26 FTGLKSAASFPVSRKQNLDITS-IASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLL 84
Query: 75 KEIDYMLKKGWIPCLEFD-EVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
EI+Y+LK GW+PCLEF+ E G+V+RE+ PGYYDGRYWTMWKLPMFGC D++Q+L E+
Sbjct: 85 SEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
+E KKAYP A++R + F+N +Q QC+SF+ KP
Sbjct: 145 EEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKP 177
>sp|O22645|RBS5_FRIAG Ribulose bisphosphate carboxylase small chain 5, chloroplastic
OS=Fritillaria agrestis GN=RBCS5 PE=2 SV=1
Length = 179
Score = 186 bits (473), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 112/153 (73%), Gaps = 3/153 (1%)
Query: 15 YLGLKPTSKALLPVKDSIAWSSKTV-SNGSKTRCMKTWNPINNKKFEALSYLPSLSDDSI 73
++GLK S + PV A T+ SNG + +CMK W + KKFE LSYLP+LS +S+
Sbjct: 28 FVGLK--SASAFPVTQKTATGLSTLPSNGGRVQCMKVWPIVGLKKFETLSYLPTLSVESL 85
Query: 74 AKEIDYMLKKGWIPCLEFDEVGYVHRENSKMPGYYDGRYWTMWKLPMFGCNDSSQILNEI 133
K+I+Y+++ GW+PCLEF G+V R+N+K PGYYDGRYWTMWKLPMFGC ++Q++ E
Sbjct: 86 LKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTGAAQVVKEA 145
Query: 134 QECKKAYPNAYIRCLAFNNQKQGQCMSFLIQKP 166
ECKK YP A+IR + F+N +Q QC+SF+++KP
Sbjct: 146 AECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,511,124
Number of Sequences: 539616
Number of extensions: 2759872
Number of successful extensions: 5528
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 5214
Number of HSP's gapped (non-prelim): 187
length of query: 172
length of database: 191,569,459
effective HSP length: 109
effective length of query: 63
effective length of database: 132,751,315
effective search space: 8363332845
effective search space used: 8363332845
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)