Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>030741
MAAITSVSQLHSSLSSLYPNYRSSPLILAPKTNQDTTICCLTVRSFTFSRRRLSSQSVPR
GLIIQNAATKPAKSPAEEDWKTKRELLLQKRVRSVEAKEALRLQKENNFVILDVRPEAEF
KEAHPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSIAS

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030741
        (172 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2137792 - symbol:AT4G27700 "AT4G27700" species...   389  4.4e-36   1
TAIR|locus:2097628 - symbol:AT3G08920 "AT3G08920" species...    96  0.00012   1


>TAIR|locus:2137792 [details] [associations]
            symbol:AT4G27700 "AT4G27700" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0007568
            "aging" evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009941
            "chloroplast envelope" evidence=IDA] [GO:0000023 "maltose metabolic
            process" evidence=RCA] [GO:0006098 "pentose-phosphate shunt"
            evidence=RCA] [GO:0019252 "starch biosynthetic process"
            evidence=RCA] [GO:0043085 "positive regulation of catalytic
            activity" evidence=RCA] PROSITE:PS00380 PROSITE:PS00683
            Pfam:PF00581 EMBL:CP002687 GO:GO:0009941 EMBL:AL161571
            Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
            PROSITE:PS50206 GO:GO:0009535 EMBL:AL035602 EMBL:AY050336
            EMBL:AY094039 EMBL:AY085226 IPI:IPI00537687 PIR:T05875
            RefSeq:NP_567785.1 UniGene:At.24242 UniGene:At.32074
            UniGene:At.70640 HSSP:P31142 ProteinModelPortal:Q94A65 SMR:Q94A65
            STRING:Q94A65 PRIDE:Q94A65 EnsemblPlants:AT4G27700.1 GeneID:828884
            KEGG:ath:AT4G27700 TAIR:At4g27700 HOGENOM:HOG000006311
            InParanoid:Q94A65 OMA:NNFVILD PhylomeDB:Q94A65
            ProtClustDB:CLSN2917625 Genevestigator:Q94A65 Uniprot:Q94A65
        Length = 224

 Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
 Identities = 75/109 (68%), Positives = 85/109 (77%)

Query:    62 LIIQNAATKPAKSPAEEDWKTKRELLLQKRVRSVEAKEALRLQKENNFVILDVRPEAEFK 121
             L IQ  +TKPAK  AE DW+ KRELLL+KRVRSV+ KEA RLQKENNFVILDVRPEAE+K
Sbjct:    44 LKIQCTSTKPAKPAAEVDWRQKRELLLEKRVRSVDVKEAQRLQKENNFVILDVRPEAEYK 103

Query:   122 EAHPPGAINVQIYRLIKEWTAWDXXXXXXXXXXXXXSGTEENPEFLQSI 170
               HPPGAINV++YRLI+EWTAWD             SGTEENPEF+QS+
Sbjct:   104 AGHPPGAINVEMYRLIREWTAWDIARRLGFAFFGIFSGTEENPEFIQSV 152


>TAIR|locus:2097628 [details] [associations]
            symbol:AT3G08920 "AT3G08920" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] PROSITE:PS00380
            PROSITE:PS00683 Pfam:PF00581 GO:GO:0016021 EMBL:CP002686
            GO:GO:0009941 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 EMBL:AC010871 GO:GO:0009534
            EMBL:AY074549 EMBL:BT002325 EMBL:AY087039 IPI:IPI00530552
            RefSeq:NP_566337.1 UniGene:At.43722 ProteinModelPortal:Q9SR92
            SMR:Q9SR92 STRING:Q9SR92 PRIDE:Q9SR92 EnsemblPlants:AT3G08920.1
            GeneID:820041 KEGG:ath:AT3G08920 TAIR:At3g08920
            HOGENOM:HOG000239976 InParanoid:Q9SR92 OMA:WLAGGFN PhylomeDB:Q9SR92
            ProtClustDB:CLSN2688183 Genevestigator:Q9SR92 Uniprot:Q9SR92
        Length = 214

 Score = 96 (38.9 bits), Expect = 0.00012, P = 0.00012
 Identities = 19/51 (37%), Positives = 34/51 (66%)

Query:    84 RELLLQKRVRSVEAKEALRLQKENNFVILDVRPEAEFKEAHPPGAINVQIY 134
             +EL+L  +VR+VE KEA  +     +++LDVRP  E ++A   G+++V ++
Sbjct:    37 KELILSGKVRAVEPKEANAVVASEGYILLDVRPAWEREKARVKGSLHVPLF 87


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.129   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      172       132   0.00091  102 3  11 23  0.45    31
                                                     30  0.43    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  586 (62 KB)
  Total size of DFA:  137 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.91u 0.15s 14.06t   Elapsed:  00:00:01
  Total cpu time:  13.91u 0.15s 14.06t   Elapsed:  00:00:01
  Start:  Mon May 20 18:39:28 2013   End:  Mon May 20 18:39:29 2013

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