Query 030753
Match_columns 172
No_of_seqs 229 out of 1512
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 05:56:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030753.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030753hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k6e_A CBS domain protein; str 99.1 2E-11 6.8E-16 92.2 2.6 86 83-168 15-113 (156)
2 3jtf_A Magnesium and cobalt ef 99.1 6.2E-11 2.1E-15 85.8 4.4 87 81-168 3-95 (129)
3 4esy_A CBS domain containing m 99.1 4.8E-11 1.6E-15 90.4 3.6 59 81-141 16-74 (170)
4 3lfr_A Putative metal ION tran 99.1 6.2E-11 2.1E-15 86.6 4.0 87 82-168 2-96 (136)
5 3ghd_A A cystathionine beta-sy 99.1 5.7E-11 2E-15 79.1 3.0 64 95-159 2-69 (70)
6 4esy_A CBS domain containing m 99.1 3.8E-11 1.3E-15 91.0 2.3 89 51-142 50-161 (170)
7 3lv9_A Putative transporter; C 99.1 3.7E-11 1.3E-15 88.6 1.8 89 79-167 19-113 (148)
8 3lhh_A CBS domain protein; str 99.0 6.1E-11 2.1E-15 90.2 2.4 75 79-153 38-113 (172)
9 3gby_A Uncharacterized protein 99.0 4.5E-11 1.5E-15 86.1 1.1 88 51-141 37-124 (128)
10 3nqr_A Magnesium and cobalt ef 99.0 8.6E-11 2.9E-15 84.7 2.5 60 82-141 2-62 (127)
11 3oi8_A Uncharacterized protein 99.0 8.8E-11 3E-15 87.8 2.6 89 80-168 35-129 (156)
12 3lfr_A Putative metal ION tran 99.0 1.2E-10 4.2E-15 85.0 2.7 89 51-142 37-126 (136)
13 3i8n_A Uncharacterized protein 99.0 4.9E-11 1.7E-15 86.3 0.1 63 80-142 3-66 (130)
14 3gby_A Uncharacterized protein 99.0 2.9E-10 9.9E-15 81.8 3.6 72 81-155 3-76 (128)
15 3nqr_A Magnesium and cobalt ef 99.0 2E-10 7E-15 82.7 2.5 86 51-140 37-123 (127)
16 2rih_A Conserved protein with 99.0 1.4E-10 4.9E-15 84.7 1.5 88 51-141 37-126 (141)
17 3ocm_A Putative membrane prote 98.9 1.9E-10 6.4E-15 88.2 1.8 62 80-141 33-95 (173)
18 3ctu_A CBS domain protein; str 98.9 2.7E-10 9.2E-15 84.5 2.6 61 81-141 13-73 (156)
19 3lqn_A CBS domain protein; csg 98.9 3E-10 1E-14 83.6 2.8 62 80-141 12-73 (150)
20 4gqw_A CBS domain-containing p 98.9 1.4E-10 4.9E-15 84.8 1.0 90 51-142 39-142 (152)
21 3kpb_A Uncharacterized protein 98.9 3E-10 1E-14 80.5 2.6 81 84-167 2-88 (122)
22 2yzi_A Hypothetical protein PH 98.9 5.9E-10 2E-14 80.8 4.1 74 80-155 4-80 (138)
23 2ef7_A Hypothetical protein ST 98.9 1.5E-10 5E-15 83.5 0.8 87 52-141 37-123 (133)
24 3kpb_A Uncharacterized protein 98.9 1.4E-10 4.7E-15 82.3 0.6 86 51-141 33-118 (122)
25 3hf7_A Uncharacterized CBS-dom 98.9 2.7E-10 9.2E-15 82.7 1.9 60 83-142 2-62 (130)
26 2emq_A Hypothetical conserved 98.9 6.9E-10 2.4E-14 82.1 3.9 62 80-141 8-69 (157)
27 3oco_A Hemolysin-like protein 98.9 2.2E-10 7.6E-15 85.1 1.1 73 81-153 18-92 (153)
28 3sl7_A CBS domain-containing p 98.9 3E-10 1E-14 85.6 1.6 59 82-140 3-61 (180)
29 3fv6_A YQZB protein; CBS domai 98.9 2.6E-10 8.9E-15 85.3 1.0 92 51-142 48-143 (159)
30 2p9m_A Hypothetical protein MJ 98.9 2.2E-10 7.4E-15 83.0 0.5 88 51-140 40-133 (138)
31 3sl7_A CBS domain-containing p 98.9 3E-10 1E-14 85.6 1.0 90 51-142 38-155 (180)
32 1yav_A Hypothetical protein BS 98.9 4.5E-10 1.5E-14 83.7 1.9 63 79-141 10-72 (159)
33 1vr9_A CBS domain protein/ACT 98.9 4.7E-10 1.6E-14 88.5 2.1 85 51-142 45-129 (213)
34 3lhh_A CBS domain protein; str 98.9 3.5E-10 1.2E-14 86.0 1.1 88 50-142 75-163 (172)
35 3k2v_A Putative D-arabinose 5- 98.9 3.7E-10 1.3E-14 83.4 1.3 86 51-139 62-148 (149)
36 3i8n_A Uncharacterized protein 98.9 2.2E-10 7.5E-15 82.8 -0.2 87 50-140 39-126 (130)
37 3lv9_A Putative transporter; C 98.9 2E-10 6.9E-15 84.6 -0.4 87 50-141 56-143 (148)
38 2p9m_A Hypothetical protein MJ 98.9 8.1E-10 2.8E-14 79.9 2.7 59 80-140 5-64 (138)
39 3k2v_A Putative D-arabinose 5- 98.9 5.1E-10 1.7E-14 82.7 1.6 59 83-141 28-86 (149)
40 4gqw_A CBS domain-containing p 98.9 6E-10 2E-14 81.4 1.9 60 81-140 3-62 (152)
41 3fhm_A Uncharacterized protein 98.9 7.2E-10 2.5E-14 83.3 2.4 90 78-167 19-119 (165)
42 3hf7_A Uncharacterized CBS-dom 98.8 2.7E-10 9.3E-15 82.7 -0.1 88 51-141 36-125 (130)
43 3oi8_A Uncharacterized protein 98.8 9.4E-10 3.2E-14 82.2 2.8 83 51-138 72-155 (156)
44 3k6e_A CBS domain protein; str 98.8 1.6E-10 5.6E-15 87.2 -1.5 88 50-141 48-140 (156)
45 3jtf_A Magnesium and cobalt ef 98.8 9.7E-10 3.3E-14 79.4 2.7 85 51-141 39-124 (129)
46 2o16_A Acetoin utilization pro 98.8 8.4E-10 2.9E-14 82.7 2.2 58 81-140 3-60 (160)
47 2ef7_A Hypothetical protein ST 98.8 1.3E-09 4.5E-14 78.4 3.1 72 81-155 2-75 (133)
48 2uv4_A 5'-AMP-activated protei 98.8 4.5E-10 1.5E-14 83.2 0.5 88 51-140 53-148 (152)
49 2yzi_A Hypothetical protein PH 98.8 9E-10 3.1E-14 79.8 1.9 89 51-142 39-128 (138)
50 3lqn_A CBS domain protein; csg 98.8 8.6E-10 2.9E-14 81.1 1.6 88 51-142 49-142 (150)
51 1pvm_A Conserved hypothetical 98.8 1.8E-09 6.3E-14 82.5 3.5 85 82-168 8-102 (184)
52 1y5h_A Hypothetical protein RV 98.8 5.9E-10 2E-14 80.3 0.7 88 51-141 40-129 (133)
53 3fhm_A Uncharacterized protein 98.8 2.4E-10 8.1E-15 86.0 -1.7 89 51-142 59-149 (165)
54 1pbj_A Hypothetical protein; s 98.8 3.6E-10 1.2E-14 80.3 -0.7 87 51-141 33-120 (125)
55 3fv6_A YQZB protein; CBS domai 98.8 1.5E-09 5.2E-14 81.1 2.6 73 80-155 14-89 (159)
56 3oco_A Hemolysin-like protein 98.8 4.4E-10 1.5E-14 83.5 -0.4 87 51-142 54-142 (153)
57 2rc3_A CBS domain; in SITU pro 98.8 7.4E-10 2.5E-14 80.1 0.8 86 52-141 42-129 (135)
58 1pvm_A Conserved hypothetical 98.8 9.9E-10 3.4E-14 84.1 1.4 90 51-142 41-132 (184)
59 3fio_A A cystathionine beta-sy 98.8 2.3E-09 7.8E-14 69.4 2.9 62 95-157 2-67 (70)
60 2emq_A Hypothetical conserved 98.8 8.9E-10 3.1E-14 81.5 0.8 88 51-142 45-138 (157)
61 2yzq_A Putative uncharacterize 98.8 2.8E-09 9.6E-14 85.6 3.5 60 81-142 219-278 (282)
62 2o16_A Acetoin utilization pro 98.8 8.5E-10 2.9E-14 82.6 0.4 88 51-141 37-133 (160)
63 3l2b_A Probable manganase-depe 98.8 2.2E-09 7.6E-14 85.6 2.8 59 81-141 183-242 (245)
64 2rih_A Conserved protein with 98.8 2.6E-09 8.8E-14 77.9 2.9 72 82-155 4-79 (141)
65 2rc3_A CBS domain; in SITU pro 98.8 2.4E-09 8.3E-14 77.3 2.2 83 84-167 7-100 (135)
66 1pbj_A Hypothetical protein; s 98.7 9.3E-10 3.2E-14 78.1 -0.1 55 84-141 2-56 (125)
67 3kxr_A Magnesium transporter, 98.7 2E-09 6.8E-14 84.8 1.7 82 53-141 91-172 (205)
68 4fry_A Putative signal-transdu 98.7 1.4E-09 4.7E-14 80.7 0.5 88 52-143 46-135 (157)
69 3ctu_A CBS domain protein; str 98.7 7.1E-10 2.4E-14 82.2 -1.1 88 51-142 49-141 (156)
70 1yav_A Hypothetical protein BS 98.7 1.1E-09 3.8E-14 81.5 -0.3 88 51-142 48-141 (159)
71 2j9l_A Chloride channel protei 98.7 2E-09 6.8E-14 81.5 1.1 60 80-142 105-164 (185)
72 3l2b_A Probable manganase-depe 98.7 4.3E-09 1.5E-13 83.9 2.9 58 82-141 6-63 (245)
73 2nyc_A Nuclear protein SNF4; b 98.7 1.4E-09 4.8E-14 78.9 -0.2 91 51-141 43-139 (144)
74 3kxr_A Magnesium transporter, 98.7 9.9E-09 3.4E-13 80.8 4.2 84 80-168 51-143 (205)
75 2d4z_A Chloride channel protei 98.7 5.4E-09 1.8E-13 85.3 2.6 60 79-140 9-70 (250)
76 2j9l_A Chloride channel protei 98.7 4E-09 1.4E-13 79.8 0.8 61 80-140 8-74 (185)
77 3pc3_A CG1753, isoform A; CBS, 98.6 6.6E-09 2.3E-13 92.5 2.2 87 80-168 381-478 (527)
78 1vr9_A CBS domain protein/ACT 98.6 2.4E-08 8.3E-13 78.6 5.2 71 81-156 11-81 (213)
79 2oux_A Magnesium transporter; 98.6 5.8E-09 2E-13 86.0 1.5 83 52-141 175-257 (286)
80 3org_A CMCLC; transporter, tra 98.6 1.5E-08 5E-13 92.3 4.2 56 84-142 569-624 (632)
81 2yzq_A Putative uncharacterize 98.6 2.9E-08 9.8E-13 79.7 5.3 99 50-155 32-134 (282)
82 3ddj_A CBS domain-containing p 98.6 8.3E-09 2.9E-13 83.8 2.1 88 51-142 52-150 (296)
83 1o50_A CBS domain-containing p 98.6 4.6E-09 1.6E-13 78.1 0.5 59 80-141 93-151 (157)
84 1y5h_A Hypothetical protein RV 98.6 6.3E-09 2.2E-13 74.8 1.2 56 81-138 6-61 (133)
85 2yvy_A MGTE, Mg2+ transporter 98.6 9.9E-09 3.4E-13 83.9 2.1 84 52-142 173-256 (278)
86 2pfi_A Chloride channel protei 98.6 1.1E-08 3.7E-13 75.8 1.8 59 81-141 11-71 (164)
87 3kh5_A Protein MJ1225; AMPK, A 98.6 2.3E-08 7.9E-13 79.9 3.7 72 82-155 83-156 (280)
88 3t4n_C Nuclear protein SNF4; C 98.6 5.3E-09 1.8E-13 86.0 -0.9 93 50-142 221-319 (323)
89 3ocm_A Putative membrane prote 98.6 7.9E-09 2.7E-13 79.0 0.1 86 51-142 70-156 (173)
90 1o50_A CBS domain-containing p 98.6 2.2E-08 7.5E-13 74.4 2.4 59 79-140 12-71 (157)
91 3kh5_A Protein MJ1225; AMPK, A 98.5 1.7E-08 5.8E-13 80.6 1.8 58 81-140 221-278 (280)
92 2pfi_A Chloride channel protei 98.5 5.2E-09 1.8E-13 77.5 -1.2 90 50-142 44-146 (164)
93 2nyc_A Nuclear protein SNF4; b 98.5 2.4E-08 8.3E-13 72.2 2.4 59 81-141 6-67 (144)
94 2yvy_A MGTE, Mg2+ transporter 98.5 5.8E-08 2E-12 79.3 4.5 83 81-168 133-226 (278)
95 3ddj_A CBS domain-containing p 98.5 1.7E-08 5.8E-13 82.0 1.2 89 50-141 124-212 (296)
96 4fry_A Putative signal-transdu 98.5 1.4E-08 4.9E-13 75.1 0.5 58 83-141 7-68 (157)
97 2v8q_E 5'-AMP-activated protei 98.5 4.4E-08 1.5E-12 80.8 2.7 90 51-142 225-322 (330)
98 2uv4_A 5'-AMP-activated protei 98.5 3.2E-08 1.1E-12 73.1 1.6 57 81-141 21-77 (152)
99 4avf_A Inosine-5'-monophosphat 98.5 2.9E-08 1E-12 88.1 1.2 90 50-144 119-208 (490)
100 1me8_A Inosine-5'-monophosphat 98.5 2E-08 7E-13 89.2 0.2 93 49-144 127-222 (503)
101 2qrd_G Protein C1556.08C; AMPK 98.5 1.8E-08 6E-13 83.2 -0.2 93 51-143 217-315 (334)
102 3org_A CMCLC; transporter, tra 98.5 3.5E-08 1.2E-12 89.9 1.6 61 81-141 451-512 (632)
103 2oux_A Magnesium transporter; 98.4 8.2E-08 2.8E-12 79.0 3.1 60 79-140 133-197 (286)
104 2zy9_A Mg2+ transporter MGTE; 98.4 5.7E-08 1.9E-12 85.7 1.9 83 52-141 193-275 (473)
105 2qrd_G Protein C1556.08C; AMPK 98.4 9.5E-08 3.3E-12 78.8 3.1 60 81-140 20-80 (334)
106 4fxs_A Inosine-5'-monophosphat 98.4 2.2E-08 7.5E-13 89.0 -0.8 91 50-144 120-210 (496)
107 4af0_A Inosine-5'-monophosphat 98.4 4.4E-08 1.5E-12 87.7 0.9 76 68-145 185-260 (556)
108 2zy9_A Mg2+ transporter MGTE; 98.4 2.3E-07 7.7E-12 81.9 4.1 85 79-168 151-246 (473)
109 2v8q_E 5'-AMP-activated protei 98.3 1.8E-07 6.1E-12 77.1 2.9 60 81-140 33-93 (330)
110 3usb_A Inosine-5'-monophosphat 98.3 1.1E-07 3.7E-12 84.9 1.0 89 50-143 144-234 (511)
111 1vrd_A Inosine-5'-monophosphat 98.3 5.5E-08 1.9E-12 85.8 -0.9 90 50-143 126-215 (494)
112 3t4n_C Nuclear protein SNF4; C 98.3 2.6E-07 8.8E-12 75.8 3.1 59 81-141 185-246 (323)
113 1jcn_A Inosine monophosphate d 98.2 1.8E-07 6.1E-12 83.1 0.6 94 49-144 138-234 (514)
114 2d4z_A Chloride channel protei 98.2 4.3E-07 1.5E-11 74.0 2.5 53 87-142 193-245 (250)
115 4fxs_A Inosine-5'-monophosphat 98.2 4.2E-07 1.4E-11 80.8 2.5 67 84-154 90-156 (496)
116 3pc3_A CG1753, isoform A; CBS, 98.2 1.6E-07 5.6E-12 83.5 -0.8 90 50-143 416-511 (527)
117 3usb_A Inosine-5'-monophosphat 98.1 8.2E-07 2.8E-11 79.2 2.0 53 85-139 115-169 (511)
118 2cu0_A Inosine-5'-monophosphat 98.1 4.3E-07 1.5E-11 80.2 0.0 84 50-142 124-207 (486)
119 1vrd_A Inosine-5'-monophosphat 98.1 4.1E-07 1.4E-11 80.2 -0.4 68 84-155 96-163 (494)
120 1zfj_A Inosine monophosphate d 98.0 3.2E-06 1.1E-10 74.3 4.3 68 84-155 91-160 (491)
121 1me8_A Inosine-5'-monophosphat 98.0 7E-07 2.4E-11 79.3 0.1 69 84-155 97-169 (503)
122 1jcn_A Inosine monophosphate d 98.0 7.3E-07 2.5E-11 79.1 -0.4 70 84-155 109-181 (514)
123 1zfj_A Inosine monophosphate d 97.9 2.3E-06 7.8E-11 75.3 2.0 86 52-142 123-210 (491)
124 4avf_A Inosine-5'-monophosphat 97.9 1.7E-06 5.9E-11 76.6 0.2 67 83-154 88-154 (490)
125 4af0_A Inosine-5'-monophosphat 97.9 1.7E-06 5.9E-11 77.5 0.1 66 87-157 142-210 (556)
126 2cu0_A Inosine-5'-monophosphat 97.6 9.4E-06 3.2E-10 71.6 0.1 52 85-139 95-146 (486)
127 3ka5_A Ribosome-associated pro 58.8 17 0.00059 23.2 4.5 37 100-136 11-47 (65)
128 1svj_A Potassium-transporting 47.9 13 0.00043 27.5 2.9 36 103-139 120-155 (156)
129 3k2t_A LMO2511 protein; lister 45.0 23 0.00078 21.9 3.3 37 100-136 11-47 (57)
130 1p0z_A Sensor kinase CITA; tra 36.4 16 0.00055 25.3 1.8 20 119-138 106-125 (131)
131 3lyv_A Ribosome-associated fac 36.3 28 0.00096 22.2 2.8 37 100-136 12-48 (66)
132 3by8_A Sensor protein DCUS; hi 35.8 17 0.00056 25.7 1.8 20 119-138 111-130 (142)
133 3tjo_A Serine protease HTRA1; 32.7 20 0.00067 27.7 1.9 22 114-135 186-207 (231)
134 3lgi_A Protease DEGS; stress-s 32.1 20 0.0007 27.5 1.9 23 113-135 172-194 (237)
135 2as9_A Serine protease; trypsi 29.6 24 0.00083 26.4 1.9 22 114-135 155-176 (210)
136 3sti_A Protease DEGQ; serine p 27.5 28 0.00097 27.2 2.0 22 114-135 184-205 (245)
137 2w7s_A Serine protease SPLA; h 27.4 28 0.00095 25.6 1.9 22 114-135 151-172 (200)
138 3k6y_A Serine protease, possib 27.3 28 0.00096 26.6 2.0 22 114-135 180-201 (237)
139 2qkp_A Uncharacterized protein 26.7 24 0.00083 25.1 1.4 23 116-138 108-131 (151)
140 3fan_A Non-structural protein; 26.5 31 0.0011 27.1 2.0 27 113-139 123-149 (213)
141 1tif_A IF3-N, translation init 25.7 19 0.00064 23.8 0.6 25 119-143 16-40 (78)
142 2w5e_A Putative serine proteas 21.2 48 0.0016 24.3 2.1 23 112-134 122-144 (163)
143 1l1j_A Heat shock protease HTR 20.4 44 0.0015 25.9 1.9 23 113-135 179-201 (239)
No 1
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.11 E-value=2e-11 Score=92.22 Aligned_cols=86 Identities=21% Similarity=0.205 Sum_probs=65.7
Q ss_pred eEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeeccc-------CCCCCCCCCCc
Q 030753 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS-------GSGRADNSMFP 155 (172)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~-------~~~~~~~~m~~ 155 (172)
.+++++|++++++.++.+++++.+|+++|.+++++++||+|++|+++|+||.+|+++..... ....+...|..
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~~ 94 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKT 94 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCBC
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhcC
Confidence 36789999988999999999999999999999999999999889999999999998643221 13444555544
Q ss_pred Cc------cchhhhhhhhc
Q 030753 156 EV------DSTWKVYIQRG 168 (172)
Q Consensus 156 ~~------~~l~~~l~~i~ 168 (172)
.+ .++.+.++.++
T Consensus 95 ~~~~v~~~~~l~~~~~~m~ 113 (156)
T 3k6e_A 95 DVAVVSPDFTITEVLHKLV 113 (156)
T ss_dssp SCCCBCTTCCHHHHHHHTT
T ss_pred CceecccccHHHHHHHHHH
Confidence 32 44555555544
No 2
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.09 E-value=6.2e-11 Score=85.78 Aligned_cols=87 Identities=21% Similarity=0.282 Sum_probs=66.2
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC-ccEEEEeeccceeeeecccCCCCCCCCCCc----
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFP---- 155 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~-~~lvGIVt~~Dll~~~~~~~~~~~~~~m~~---- 155 (172)
...+|+++|+++.++.++.+++++.+++++|.+++++++||+|++ |+++|+||.+|+++.... ......+.|.+
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~-~~~~v~~~m~~~~~v 81 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLE-PALDIRSLVRPAVFI 81 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTC-TTSCGGGGCBCCCEE
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhcc-CCcCHHHHhCCCeEe
Confidence 466899999965488999999999999999999999999999975 899999999999875432 23334444433
Q ss_pred -Cccchhhhhhhhc
Q 030753 156 -EVDSTWKVYIQRG 168 (172)
Q Consensus 156 -~~~~l~~~l~~i~ 168 (172)
.-.++.+.++.++
T Consensus 82 ~~~~~l~~~~~~m~ 95 (129)
T 3jtf_A 82 PEVKRLNVLLREFR 95 (129)
T ss_dssp ETTCBHHHHHHHHH
T ss_pred CCCCcHHHHHHHHH
Confidence 2345555555544
No 3
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.08 E-value=4.8e-11 Score=90.37 Aligned_cols=59 Identities=25% Similarity=0.455 Sum_probs=55.1
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeee
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
..++|+|+|++ +++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|+++..
T Consensus 16 ~~~~V~diM~~--~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~ 74 (170)
T 4esy_A 16 RQVPIRDILTS--PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGS 74 (170)
T ss_dssp HTSBGGGGCCS--CCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGT
T ss_pred cCCCHHHhcCC--CCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHH
Confidence 45799999999 999999999999999999999999999999899999999999998643
No 4
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.08 E-value=6.2e-11 Score=86.63 Aligned_cols=87 Identities=22% Similarity=0.269 Sum_probs=65.9
Q ss_pred eeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC-ccEEEEeeccceeeeec--ccCCCCCCCCCCc---
Q 030753 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDS--ISGSGRADNSMFP--- 155 (172)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~-~~lvGIVt~~Dll~~~~--~~~~~~~~~~m~~--- 155 (172)
+.+|+++|+++.++.++.+++++.+++++|.+++++.+||+|++ |+++|+||.+|+++... ..........|.+
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m~~~~~ 81 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLLRPATF 81 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTCBCCCE
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHcCCCeE
Confidence 45899999965588999999999999999999999999999977 79999999999997643 2224445555544
Q ss_pred --Cccchhhhhhhhc
Q 030753 156 --EVDSTWKVYIQRG 168 (172)
Q Consensus 156 --~~~~l~~~l~~i~ 168 (172)
.-.++.+.++.++
T Consensus 82 v~~~~~l~~~~~~m~ 96 (136)
T 3lfr_A 82 VPESKRLNVLLREFR 96 (136)
T ss_dssp EETTCBHHHHHHHHH
T ss_pred ECCCCcHHHHHHHHH
Confidence 2244555554443
No 5
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.06 E-value=5.7e-11 Score=79.10 Aligned_cols=64 Identities=23% Similarity=0.329 Sum_probs=52.9
Q ss_pred eeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeecccC----CCCCCCCCCcCccc
Q 030753 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG----SGRADNSMFPEVDS 159 (172)
Q Consensus 95 ~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~~----~~~~~~~m~~~~~~ 159 (172)
++++.|++++.+|+++|.+++++++||+| +|+++||+|.+|+.+.....+ ..+++++|++++.+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iT 69 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVK 69 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeE
Confidence 67899999999999999999999999998 589999999999985443322 45677788776543
No 6
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.06 E-value=3.8e-11 Score=90.95 Aligned_cols=89 Identities=20% Similarity=0.227 Sum_probs=73.1
Q ss_pred cccchhhhhccCceeeecCceeccCCCC-----------------------CCCeeEecceeeccceeeeecccccHHHH
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAAP-----------------------SSGVYTVGDFMTTKEELHVVKPTTTVDEA 107 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~-----------------------~~~~~~V~diM~~~~~~~~v~~~~sl~ea 107 (172)
+++|+++..+...|.++...+....... .....+++++|++ +++++.+++++.++
T Consensus 50 ~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~tv~~~~~l~~a 127 (170)
T 4esy_A 50 GCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVEHLFETGRKLTASAVMTQ--PVVTAAPEDSVGSI 127 (170)
T ss_dssp SEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBC--CSCCBCTTSBHHHH
T ss_pred eEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHHhhhccccccchhhhccc--CcccCCcchhHHHH
Confidence 5678888888888888777765443211 1134689999999 99999999999999
Q ss_pred HHHHHHhhhcCcceecCCccEEEEeeccceeeeec
Q 030753 108 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 108 l~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~ 142 (172)
+++|.++++.++||+| +|+++||||..||+++..
T Consensus 128 ~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~ 161 (170)
T 4esy_A 128 ADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLL 161 (170)
T ss_dssp HHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSC
T ss_pred HHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 9999999999999998 689999999999997654
No 7
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.05 E-value=3.7e-11 Score=88.64 Aligned_cols=89 Identities=16% Similarity=0.180 Sum_probs=69.0
Q ss_pred CCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC-ccEEEEeeccceeeeecccCCCCCCCCCCc--
Q 030753 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFP-- 155 (172)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~-~~lvGIVt~~Dll~~~~~~~~~~~~~~m~~-- 155 (172)
.+...+|+++|+++.++.++.+++++.+++++|.+++++.+||+|++ |+++|+||.+|+++...........+.|.+
T Consensus 19 ~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~~m~~~~ 98 (148)
T 3lv9_A 19 EFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINENKIELEEILRDII 98 (148)
T ss_dssp GGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHSCCCGGGTCBCCE
T ss_pred ccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCCCccHHHhcCCCe
Confidence 34678999999987789999999999999999999999999999977 899999999999876433324455555622
Q ss_pred ---Cccchhhhhhhh
Q 030753 156 ---EVDSTWKVYIQR 167 (172)
Q Consensus 156 ---~~~~l~~~l~~i 167 (172)
.-.++.+.++.+
T Consensus 99 ~v~~~~~l~~~~~~m 113 (148)
T 3lv9_A 99 YISENLTIDKALERI 113 (148)
T ss_dssp EEETTSBHHHHHHHH
T ss_pred EECCCCCHHHHHHHH
Confidence 224455555444
No 8
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.03 E-value=6.1e-11 Score=90.23 Aligned_cols=75 Identities=16% Similarity=0.261 Sum_probs=60.4
Q ss_pred CCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC-ccEEEEeeccceeeeecccCCCCCCCCC
Q 030753 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSM 153 (172)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~-~~lvGIVt~~Dll~~~~~~~~~~~~~~m 153 (172)
.+...+|+++|+++.+++++.+++++.+++++|.+++++.+||+|++ ++++|+||.+|+++............+|
T Consensus 38 ~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im 113 (172)
T 3lhh_A 38 RLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGERLELVDLV 113 (172)
T ss_dssp -----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC
T ss_pred ccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh
Confidence 45778999999954489999999999999999999999999999977 8999999999999765444345566666
No 9
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.02 E-value=4.5e-11 Score=86.15 Aligned_cols=88 Identities=14% Similarity=0.181 Sum_probs=71.3
Q ss_pred cccchhhhhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEE
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVG 130 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvG 130 (172)
+++++++. +...|.++...+............+++++|.+ ++.++.+++++.+++++|.++++..+||+|++|+++|
T Consensus 37 ~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~G 113 (128)
T 3gby_A 37 ACAPVLDG-ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLE--TVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEG 113 (128)
T ss_dssp SEEEEEET-TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCB--CCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEE
T ss_pred cEEEEEEC-CEEEEEEEHHHHHHHHhhCCcccCcHHHHccC--CCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEE
Confidence 46677776 66677776666654433222233689999998 9999999999999999999999999999998899999
Q ss_pred Eeeccceeeee
Q 030753 131 LVSDYDLLALD 141 (172)
Q Consensus 131 IVt~~Dll~~~ 141 (172)
+||..|+++..
T Consensus 114 iit~~dll~~l 124 (128)
T 3gby_A 114 VVSRKRILGFL 124 (128)
T ss_dssp EEEHHHHHHHH
T ss_pred EEEHHHHHHHH
Confidence 99999998643
No 10
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.02 E-value=8.6e-11 Score=84.65 Aligned_cols=60 Identities=30% Similarity=0.516 Sum_probs=53.6
Q ss_pred eeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC-ccEEEEeeccceeeee
Q 030753 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALD 141 (172)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~-~~lvGIVt~~Dll~~~ 141 (172)
+.+|+++|++..++.++.+++++.+++++|.+++++.+||+|++ |+++|+||.+|+++..
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~ 62 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFM 62 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGG
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHH
Confidence 45899999973359999999999999999999999999999987 8999999999999654
No 11
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.02 E-value=8.8e-11 Score=87.84 Aligned_cols=89 Identities=20% Similarity=0.259 Sum_probs=67.4
Q ss_pred CCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC-ccEEEEeeccceeeeecccCCCCCCCCCCc---
Q 030753 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFP--- 155 (172)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~-~~lvGIVt~~Dll~~~~~~~~~~~~~~m~~--- 155 (172)
+...+|+++|+++.+++++.+++++.+++++|.+++++.+||+|++ ++++|+||.+|+++............+|.+
T Consensus 35 l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im~~~~~ 114 (156)
T 3oi8_A 35 FSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNPEQFHLKSILRPAVF 114 (156)
T ss_dssp HTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHCBCCCE
T ss_pred cCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHcCCCEE
Confidence 3677999999986678999999999999999999999999999977 499999999999976433222333333332
Q ss_pred --Cccchhhhhhhhc
Q 030753 156 --EVDSTWKVYIQRG 168 (172)
Q Consensus 156 --~~~~l~~~l~~i~ 168 (172)
.-.++.+.++.++
T Consensus 115 v~~~~~l~~a~~~m~ 129 (156)
T 3oi8_A 115 VPEGKSLTALLKEFR 129 (156)
T ss_dssp EETTSBHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHH
Confidence 3355555555543
No 12
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.00 E-value=1.2e-10 Score=85.04 Aligned_cols=89 Identities=15% Similarity=0.067 Sum_probs=70.9
Q ss_pred cccchhhhh-ccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 51 TSSDRVSAL-RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 51 r~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
+++|+++.. +...|.+....+............+++++|.+ +.++.+++++.+++++|.++++..+||+|++|+++
T Consensus 37 ~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lv 113 (136)
T 3lfr_A 37 SRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLLRP---ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVA 113 (136)
T ss_dssp SEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTCBC---CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEE
T ss_pred CEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEE
Confidence 466777765 56677777766665433233456789999954 78999999999999999999999999999889999
Q ss_pred EEeeccceeeeec
Q 030753 130 GLVSDYDLLALDS 142 (172)
Q Consensus 130 GIVt~~Dll~~~~ 142 (172)
|+||..|+++...
T Consensus 114 Giit~~Dil~~l~ 126 (136)
T 3lfr_A 114 GLVTIEDVLEQIV 126 (136)
T ss_dssp EEEEHHHHHTTC-
T ss_pred EEEEHHHHHHHHh
Confidence 9999999987543
No 13
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.98 E-value=4.9e-11 Score=86.28 Aligned_cols=63 Identities=19% Similarity=0.276 Sum_probs=53.5
Q ss_pred CCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC-ccEEEEeeccceeeeec
Q 030753 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDS 142 (172)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~-~~lvGIVt~~Dll~~~~ 142 (172)
+...+|+++|++..+++++.+++++.+++++|.+++++.+||+|++ |+++|+||.+|+++...
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~ 66 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQ 66 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHH
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHh
Confidence 4678999999975467789999999999999999999999999977 89999999999987543
No 14
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.97 E-value=2.9e-10 Score=81.81 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=59.9
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeecccCC--CCCCCCCCc
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS--GRADNSMFP 155 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~~~--~~~~~~m~~ 155 (172)
.+.+++++|++ ++.++.+++++.+++++|.+++++.+||+|+ |+++|+|+.+|+.+....... ....+.|.+
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~ 76 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLE 76 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCB
T ss_pred cceEHHHhhcC--CcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCcccCcHHHHccC
Confidence 46799999999 9999999999999999999999999999997 999999999999865443221 344555543
No 15
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.96 E-value=2e-10 Score=82.66 Aligned_cols=86 Identities=21% Similarity=0.217 Sum_probs=69.3
Q ss_pred cccchhhhh-ccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 51 TSSDRVSAL-RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 51 r~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
+++|+++.. +...|.+....+..... ......+++++|.+ +.++.+++++.+++++|.++++..+||+|++|+++
T Consensus 37 ~~~pVvd~~~~~~vGivt~~dl~~~~~-~~~~~~~v~~~m~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~ 112 (127)
T 3nqr_A 37 SRFPVISEDKDHIEGILMAKDLLPFMR-SDAEAFSMDKVLRT---AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVS 112 (127)
T ss_dssp SEEEEESSSTTCEEEEEEGGGGGGGGS-TTCCCCCHHHHCBC---CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEE
T ss_pred CEEEEEcCCCCcEEEEEEHHHHHHHHh-ccCCCCCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEE
Confidence 466777765 56677776666654432 23356789999944 67899999999999999999999999999889999
Q ss_pred EEeeccceeee
Q 030753 130 GLVSDYDLLAL 140 (172)
Q Consensus 130 GIVt~~Dll~~ 140 (172)
|+||..|+++.
T Consensus 113 Giit~~dll~~ 123 (127)
T 3nqr_A 113 GLVTIEDILEL 123 (127)
T ss_dssp EEEEHHHHHHH
T ss_pred EEEEHHHHHHH
Confidence 99999999864
No 16
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.95 E-value=1.4e-10 Score=84.66 Aligned_cols=88 Identities=18% Similarity=0.101 Sum_probs=69.0
Q ss_pred cccchhhhhc--cCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccE
Q 030753 51 TSSDRVSALR--RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128 (172)
Q Consensus 51 r~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~l 128 (172)
+++++++..+ ...|.++...+............+++++|.+ ++.++.++ ++.+++++|.++++..+||+|++|++
T Consensus 37 ~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~--~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~ 113 (141)
T 2rih_A 37 GLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPIANS--PITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGEL 113 (141)
T ss_dssp SEEEEEETTEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBC--CCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCE
T ss_pred CEEEEEcCCCcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCC--CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcE
Confidence 3566776655 5666666655543322222245789999998 99999999 99999999999999999999988999
Q ss_pred EEEeeccceeeee
Q 030753 129 VGLVSDYDLLALD 141 (172)
Q Consensus 129 vGIVt~~Dll~~~ 141 (172)
+|+||..|+++..
T Consensus 114 ~Giit~~dll~~~ 126 (141)
T 2rih_A 114 VGVLSIRDLCFER 126 (141)
T ss_dssp EEEEEHHHHHSCH
T ss_pred EEEEEHHHHHHHH
Confidence 9999999998643
No 17
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.94 E-value=1.9e-10 Score=88.22 Aligned_cols=62 Identities=19% Similarity=0.178 Sum_probs=56.2
Q ss_pred CCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC-ccEEEEeeccceeeee
Q 030753 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALD 141 (172)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~-~~lvGIVt~~Dll~~~ 141 (172)
+...+|+++|+++.+++++.+++++.+++++|.+++++.+||+|++ |+++|+|+.+|++...
T Consensus 33 l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~ 95 (173)
T 3ocm_A 33 LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADL 95 (173)
T ss_dssp HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHH
T ss_pred cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHH
Confidence 4677999999975579999999999999999999999999999876 8999999999998654
No 18
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.94 E-value=2.7e-10 Score=84.51 Aligned_cols=61 Identities=26% Similarity=0.356 Sum_probs=54.1
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeee
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
...+++++|++.+++.++.+++++.+++++|.+++++.+||+|++|+++|+||.+|+.+..
T Consensus 13 ~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~ 73 (156)
T 3ctu_A 13 LLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQ 73 (156)
T ss_dssp HHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHH
T ss_pred HHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHH
Confidence 3457899999655899999999999999999999999999999889999999999998654
No 19
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.94 E-value=3e-10 Score=83.57 Aligned_cols=62 Identities=29% Similarity=0.352 Sum_probs=55.9
Q ss_pred CCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeee
Q 030753 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
+...+|+++|++.+++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|+++..
T Consensus 12 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 73 (150)
T 3lqn_A 12 FQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGI 73 (150)
T ss_dssp HHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHT
T ss_pred hhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHH
Confidence 36689999999644799999999999999999999999999999889999999999998654
No 20
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.93 E-value=1.4e-10 Score=84.79 Aligned_cols=90 Identities=26% Similarity=0.338 Sum_probs=69.9
Q ss_pred cccchhhhhccCceeeecCceeccCC--------------CCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhh
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSA--------------APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRI 116 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~--------------~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i 116 (172)
+++++++..+...|.++...+..... .......+++++|.+ ++.++.+++++.+++++|.++++
T Consensus 39 ~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~ 116 (152)
T 4gqw_A 39 TGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNGKLVGDLMTP--APLVVEEKTNLEDAAKILLETKY 116 (152)
T ss_dssp SEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----CCBHHHHSEE--SCCCEESSSBHHHHHHHHHHSSC
T ss_pred ceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhccccHHHhcCC--CceEECCCCcHHHHHHHHHHCCC
Confidence 45677776666677776666643211 112345789999999 89999999999999999999999
Q ss_pred cCcceecCCccEEEEeeccceeeeec
Q 030753 117 TGFPVIDDDWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 117 ~~lPVvd~~~~lvGIVt~~Dll~~~~ 142 (172)
+.+||+|++|+++|+||.+|+++...
T Consensus 117 ~~l~Vvd~~g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 117 RRLPVVDSDGKLVGIITRGNVVRAAL 142 (152)
T ss_dssp CEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CEEEEECCCCcEEEEEEHHHHHHHHH
Confidence 99999998899999999999997543
No 21
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.93 E-value=3e-10 Score=80.50 Aligned_cols=81 Identities=21% Similarity=0.343 Sum_probs=62.9
Q ss_pred EecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeecccCCCCCCCCCCcC------c
Q 030753 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE------V 157 (172)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~~~~~~~~~m~~~------~ 157 (172)
+|+++|.+ ++.++.+++++.++++.|.+++++.+||+|++|+++|+|+.+|+.+..... .......|.+. -
T Consensus 2 ~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~-~~~v~~~~~~~~~~v~~~ 78 (122)
T 3kpb_A 2 LVKDILSK--PPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQN-KKTIEEIMTRNVITAHED 78 (122)
T ss_dssp BHHHHCCS--CCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTT-CCBGGGTSBSSCCCEETT
T ss_pred chHHhhCC--CCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhc-ccCHHHHhcCCCeEECCC
Confidence 68899999 999999999999999999999999999999889999999999998654332 22344444332 2
Q ss_pred cchhhhhhhh
Q 030753 158 DSTWKVYIQR 167 (172)
Q Consensus 158 ~~l~~~l~~i 167 (172)
.++.+.++.+
T Consensus 79 ~~l~~~~~~~ 88 (122)
T 3kpb_A 79 EPVDHVAIKM 88 (122)
T ss_dssp SBHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 4455555444
No 22
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.93 E-value=5.9e-10 Score=80.75 Aligned_cols=74 Identities=26% Similarity=0.318 Sum_probs=60.4
Q ss_pred CCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceee-eecc--cCCCCCCCCCCc
Q 030753 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSI--SGSGRADNSMFP 155 (172)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~-~~~~--~~~~~~~~~m~~ 155 (172)
+...+|+++|++ ++.++.+++++.++++.|.+++++.+||+|++|+++|+|+.+|+++ .... .........|.+
T Consensus 4 l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~ 80 (138)
T 2yzi_A 4 DMKAPIKVYMTK--KLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIMTR 80 (138)
T ss_dssp CTTSBGGGTCBC--CCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCCCTTSBGGGTCBC
T ss_pred hhhhhHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCCcccCCHHHHhhC
Confidence 356799999998 9999999999999999999999999999998899999999999973 2221 123455556644
No 23
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.93 E-value=1.5e-10 Score=83.51 Aligned_cols=87 Identities=21% Similarity=0.263 Sum_probs=67.9
Q ss_pred ccchhhhhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEE
Q 030753 52 SSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131 (172)
Q Consensus 52 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGI 131 (172)
++++++ .+...|.++...+............+++++|.+ ++.++.+++++.++++.|.++++..+||+|++|+++|+
T Consensus 37 ~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Gi 113 (133)
T 2ef7_A 37 SVIVVD-GNKPVGIITERDIVKAIGKGKSLETKAEEFMTA--SLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGI 113 (133)
T ss_dssp EEEEEE-TTEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEE
T ss_pred EEEEEE-CCEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC--CCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEE
Confidence 456666 555566665555543222222345789999998 89999999999999999999999999999988999999
Q ss_pred eeccceeeee
Q 030753 132 VSDYDLLALD 141 (172)
Q Consensus 132 Vt~~Dll~~~ 141 (172)
||..|+++..
T Consensus 114 it~~dll~~~ 123 (133)
T 2ef7_A 114 ISIRDITRAI 123 (133)
T ss_dssp EEHHHHHHHH
T ss_pred EEHHHHHHHH
Confidence 9999998643
No 24
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.93 E-value=1.4e-10 Score=82.31 Aligned_cols=86 Identities=22% Similarity=0.287 Sum_probs=69.1
Q ss_pred cccchhhhhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEE
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVG 130 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvG 130 (172)
+++++++..+...|.+....+...... ...+++++|.+ ++.++.+++++.+++++|.+++++.+||+|++|+++|
T Consensus 33 ~~~~Vvd~~~~~~G~vt~~dl~~~~~~---~~~~v~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~G 107 (122)
T 3kpb_A 33 NHLPIVDEHGKLVGIITSWDIAKALAQ---NKKTIEEIMTR--NVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVG 107 (122)
T ss_dssp SCEEEECTTSBEEEEECHHHHHHHHHT---TCCBGGGTSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEE
T ss_pred CeEEEECCCCCEEEEEEHHHHHHHHHh---cccCHHHHhcC--CCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEE
Confidence 456777766666677655555433222 23389999998 8999999999999999999999999999998899999
Q ss_pred Eeeccceeeee
Q 030753 131 LVSDYDLLALD 141 (172)
Q Consensus 131 IVt~~Dll~~~ 141 (172)
+||..|+++..
T Consensus 108 ivt~~dl~~~l 118 (122)
T 3kpb_A 108 IVTSEDISRLF 118 (122)
T ss_dssp EEEHHHHHHHH
T ss_pred EEeHHHHHHHh
Confidence 99999998643
No 25
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.92 E-value=2.7e-10 Score=82.70 Aligned_cols=60 Identities=12% Similarity=0.107 Sum_probs=53.6
Q ss_pred eEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecC-CccEEEEeeccceeeeec
Q 030753 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD-DWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~-~~~lvGIVt~~Dll~~~~ 142 (172)
++|+++|+++.+++++.+++++.+++++|.+++++.+||+++ +|+++|+||.+|+++...
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~ 62 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMT 62 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHT
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHh
Confidence 578999987557899999999999999999999999999975 489999999999986544
No 26
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.91 E-value=6.9e-10 Score=82.10 Aligned_cols=62 Identities=27% Similarity=0.403 Sum_probs=54.8
Q ss_pred CCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeee
Q 030753 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
+...+|+++|++++++.++.+++++.+++++|.+++++.+||+|++|+++|+|+.+|+.+..
T Consensus 8 l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 69 (157)
T 2emq_A 8 FMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAI 69 (157)
T ss_dssp --CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHS
T ss_pred HhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHH
Confidence 46789999999655788999999999999999999999999999889999999999998654
No 27
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.90 E-value=2.2e-10 Score=85.12 Aligned_cols=73 Identities=26% Similarity=0.471 Sum_probs=61.2
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCccee-cCC-ccEEEEeeccceeeeecccCCCCCCCCC
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVI-DDD-WKLVGLVSDYDLLALDSISGSGRADNSM 153 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVv-d~~-~~lvGIVt~~Dll~~~~~~~~~~~~~~m 153 (172)
...+|+++|+++.++.++.+++++.+++++|.+++++.+||+ |++ |+++|+||.+|+++.............|
T Consensus 18 ~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~~~~v~~~m 92 (153)
T 3oco_A 18 NDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDDKAKISTIM 92 (153)
T ss_dssp HHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHTTSBGGGTC
T ss_pred CCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCCCCcHHHHh
Confidence 567999999976689999999999999999999999999999 654 8999999999998764433345556666
No 28
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.90 E-value=3e-10 Score=85.55 Aligned_cols=59 Identities=75% Similarity=1.256 Sum_probs=54.3
Q ss_pred eeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeee
Q 030753 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (172)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~ 140 (172)
.++|+++|+++.+++++.+++++.+++++|.+++++.+||+|++|+++|+|+.+||++.
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 61 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLAL 61 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhh
Confidence 46899999986678999999999999999999999999999988999999999999854
No 29
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.89 E-value=2.6e-10 Score=85.25 Aligned_cols=92 Identities=21% Similarity=0.191 Sum_probs=74.8
Q ss_pred cccchhhhhccCceeeecCceeccCCC-CCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCc---
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAA-PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW--- 126 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~--- 126 (172)
+++++++..+...|.++...+...... ......+++++|.+..++.++.+++++.+++++|.++++..+||+|++|
T Consensus 48 ~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~ 127 (159)
T 3fv6_A 48 GTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGF 127 (159)
T ss_dssp SEEEEECTTSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSE
T ss_pred CEEEEEcCCCcEEEEEeHHHHHHHhhccCcccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcce
Confidence 467788877777788777776654332 2346679999998755688999999999999999999999999999777
Q ss_pred cEEEEeeccceeeeec
Q 030753 127 KLVGLVSDYDLLALDS 142 (172)
Q Consensus 127 ~lvGIVt~~Dll~~~~ 142 (172)
+++|+||..||++...
T Consensus 128 ~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 128 EVIGRVTKTNMTKILV 143 (159)
T ss_dssp EEEEEEEHHHHHHHHH
T ss_pred eEEEEEEHHHHHHHHH
Confidence 9999999999986543
No 30
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.89 E-value=2.2e-10 Score=82.96 Aligned_cols=88 Identities=22% Similarity=0.314 Sum_probs=70.6
Q ss_pred cccchhhhhccCceeeecCce-eccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhh-----hcCcceecC
Q 030753 51 TSSDRVSALRRSSAVFASGTL-TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKR-----ITGFPVIDD 124 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~-----i~~lPVvd~ 124 (172)
+.+++++..+...|.++...+ ............+++++|.+ ++.++.+++++.++++.|.+++ ++.+||+|+
T Consensus 40 ~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~ 117 (138)
T 2p9m_A 40 SSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTK--DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK 117 (138)
T ss_dssp CEEEEECTTCBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSCS--SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT
T ss_pred cEEEEECCCCeEEEEEEHHHHHHHHHhhcccCCcCHHHHhCC--CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC
Confidence 356677766667777777666 43322334456789999998 8999999999999999999999 999999998
Q ss_pred CccEEEEeeccceeee
Q 030753 125 DWKLVGLVSDYDLLAL 140 (172)
Q Consensus 125 ~~~lvGIVt~~Dll~~ 140 (172)
+|+++|+||..|+++.
T Consensus 118 ~g~~~Giit~~dll~~ 133 (138)
T 2p9m_A 118 NNKLVGIISDGDIIRT 133 (138)
T ss_dssp TSBEEEEEEHHHHHHH
T ss_pred CCeEEEEEEHHHHHHH
Confidence 8999999999998864
No 31
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.88 E-value=3e-10 Score=85.58 Aligned_cols=90 Identities=24% Similarity=0.330 Sum_probs=70.8
Q ss_pred cccchhhhhccCceeeecCceeccCCC----------------------------CCCCeeEecceeeccceeeeecccc
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAA----------------------------PSSGVYTVGDFMTTKEELHVVKPTT 102 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~----------------------------~~~~~~~V~diM~~~~~~~~v~~~~ 102 (172)
+++|+++..+...|.++...+...... ......+++++|++ ++.++.+++
T Consensus 38 ~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~ 115 (180)
T 3sl7_A 38 TGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTP--SPLVVRDST 115 (180)
T ss_dssp SEEEEECTTCBEEEEEEHHHHTCC-------------------CCCSHHHHHHHHHTTTTCBHHHHSEE--SCCCEETTS
T ss_pred CeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhhhhHHHHHHHhccccccHHHHhCC--CceEeCCCC
Confidence 456677766666677766665532110 02345689999998 899999999
Q ss_pred cHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeec
Q 030753 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 103 sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~ 142 (172)
++.+++++|.++++..+||+|++|+++|+||.+|+++...
T Consensus 116 ~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~ 155 (180)
T 3sl7_A 116 NLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAAL 155 (180)
T ss_dssp BHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 9999999999999999999998899999999999986543
No 32
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.88 E-value=4.5e-10 Score=83.70 Aligned_cols=63 Identities=25% Similarity=0.395 Sum_probs=56.2
Q ss_pred CCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeee
Q 030753 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
.+...+|+++|++++++.++.+++++.+++++|.+++++.+||+|++|+++|+|+.+|+....
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~ 72 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSI 72 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHh
Confidence 345679999998766789999999999999999999999999999889999999999998654
No 33
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.88 E-value=4.7e-10 Score=88.46 Aligned_cols=85 Identities=19% Similarity=0.131 Sum_probs=67.8
Q ss_pred cccchhhhhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEE
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVG 130 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvG 130 (172)
+.+++++..+...|.++...+.. .....+++++|++ ++.++.+++++.+++++|.+++++.+||+|++|+++|
T Consensus 45 ~~~pVvd~~~~l~Givt~~dl~~-----~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvG 117 (213)
T 1vr9_A 45 NECIVKDREGHFRGVVNKEDLLD-----LDLDSSVFNKVSL--PDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKG 117 (213)
T ss_dssp SEEEEECTTSBEEEEEEGGGGTT-----SCTTSBSGGGCBC--TTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEE
T ss_pred CEEEEEcCCCEEEEEEEHHHHHh-----hcCCCcHHHHccC--CCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEE
Confidence 45566765555555554444432 2235689999999 8999999999999999999999999999997799999
Q ss_pred Eeeccceeeeec
Q 030753 131 LVSDYDLLALDS 142 (172)
Q Consensus 131 IVt~~Dll~~~~ 142 (172)
+||.+|+++...
T Consensus 118 iit~~Dil~~~~ 129 (213)
T 1vr9_A 118 AVSLHDFLEALI 129 (213)
T ss_dssp EEEHHHHHHHHH
T ss_pred EEEHHHHHHHHH
Confidence 999999986543
No 34
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.87 E-value=3.5e-10 Score=85.98 Aligned_cols=88 Identities=17% Similarity=0.104 Sum_probs=71.0
Q ss_pred ecccchhhhh-ccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccE
Q 030753 50 ATSSDRVSAL-RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128 (172)
Q Consensus 50 ~r~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~l 128 (172)
++++|+++.. +...|.+....+....... ...+++++| + ++.++.+++++.+++++|.++++..+||+|++|++
T Consensus 75 ~~~~pVvd~~~~~lvGivt~~dl~~~~~~~--~~~~v~~im-~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~l 149 (172)
T 3lhh_A 75 HSRFPVCRNNVDDMVGIISAKQLLSESIAG--ERLELVDLV-K--NCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDL 149 (172)
T ss_dssp CSEEEEESSSTTSEEEEEEHHHHHHHHHTT--CCCCGGGGC-B--CCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCE
T ss_pred CCEEEEEeCCCCeEEEEEEHHHHHHHHhhc--CcccHHHHh-c--CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCE
Confidence 4567777765 6666777666655443322 367899999 7 89999999999999999999999999999988999
Q ss_pred EEEeeccceeeeec
Q 030753 129 VGLVSDYDLLALDS 142 (172)
Q Consensus 129 vGIVt~~Dll~~~~ 142 (172)
+|+||..|+++...
T Consensus 150 vGiit~~Dil~~l~ 163 (172)
T 3lhh_A 150 KGLVTLQDMMDALT 163 (172)
T ss_dssp EEEEEHHHHHHHHH
T ss_pred EEEeeHHHHHHHHh
Confidence 99999999997544
No 35
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.87 E-value=3.7e-10 Score=83.39 Aligned_cols=86 Identities=24% Similarity=0.275 Sum_probs=70.3
Q ss_pred cccchhhhhccCceeeecCceeccCCCC-CCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAAP-SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
+++++++..+...|.++...+...-... .....+++++|.+ ++.++.+++++.+++++|.++++..+||+|++ +++
T Consensus 62 ~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~ 138 (149)
T 3k2v_A 62 GMTAICDDDMNIIGIFTDGDLRRVFDTGVDMRDASIADVMTR--GGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLL 138 (149)
T ss_dssp SEEEEECTTCBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEE--SCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEE
T ss_pred cEEEEECCCCcEEEEecHHHHHHHHhcCCCcccCcHHHHcCC--CCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEE
Confidence 4667787777777777766665433222 2356799999999 89999999999999999999999999999965 999
Q ss_pred EEeeccceee
Q 030753 130 GLVSDYDLLA 139 (172)
Q Consensus 130 GIVt~~Dll~ 139 (172)
|+||..|+++
T Consensus 139 Giit~~dil~ 148 (149)
T 3k2v_A 139 GVVHMHDLLR 148 (149)
T ss_dssp EEEEHHHHTC
T ss_pred EEEEHHHhhc
Confidence 9999999875
No 36
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.86 E-value=2.2e-10 Score=82.81 Aligned_cols=87 Identities=18% Similarity=0.188 Sum_probs=68.6
Q ss_pred ecccchhhhh-ccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccE
Q 030753 50 ATSSDRVSAL-RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128 (172)
Q Consensus 50 ~r~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~l 128 (172)
++++|+++.. +...|.+....+..... ......+++++| . ++.++.+++++.+++++|.++++..+||+|++|++
T Consensus 39 ~~~~pVvd~~~~~~~Givt~~dl~~~~~-~~~~~~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~ 114 (130)
T 3i8n_A 39 FSRPLVYSEQKDNIIGFVHRLELFKMQQ-SGSGQKQLGAVM-R--PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTV 114 (130)
T ss_dssp CSCCEEESSSTTCEEEECCHHHHHHHHH-TTTTTSBHHHHS-E--ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCE
T ss_pred CCEEEEEeCCCCcEEEEEEHHHHHHHHh-cCCCcCCHHHHh-c--CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCE
Confidence 3567777765 56667666655544322 122467899999 4 57899999999999999999999999999988999
Q ss_pred EEEeeccceeee
Q 030753 129 VGLVSDYDLLAL 140 (172)
Q Consensus 129 vGIVt~~Dll~~ 140 (172)
+|+||..|+++.
T Consensus 115 vGivt~~dil~~ 126 (130)
T 3i8n_A 115 LGLVTLEDIFEH 126 (130)
T ss_dssp EEEEEHHHHHHH
T ss_pred EEEEEHHHHHHH
Confidence 999999999864
No 37
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.86 E-value=2e-10 Score=84.65 Aligned_cols=87 Identities=15% Similarity=0.121 Sum_probs=68.7
Q ss_pred ecccchhhhh-ccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccE
Q 030753 50 ATSSDRVSAL-RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128 (172)
Q Consensus 50 ~r~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~l 128 (172)
++++|+++.. +...|.+....+....... ...+++++| + ++.++.+++++.+++++|.++++..+||+|++|++
T Consensus 56 ~~~~pVvd~~~~~lvGivt~~dl~~~~~~~--~~~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~ 130 (148)
T 3lv9_A 56 VTRYPVCRKNKDDILGFVHIRDLYNQKINE--NKIELEEIL-R--DIIYISENLTIDKALERIRKEKLQLAIVVDEYGGT 130 (148)
T ss_dssp CSEEEEESSSTTSEEEEEEHHHHHHHHHHH--SCCCGGGTC-B--CCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSE
T ss_pred CCEEEEEcCCCCcEEEEEEHHHHHHHHhcC--CCccHHHhc-C--CCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCE
Confidence 3456777765 5666666665554432211 166899999 7 78999999999999999999999999999988999
Q ss_pred EEEeeccceeeee
Q 030753 129 VGLVSDYDLLALD 141 (172)
Q Consensus 129 vGIVt~~Dll~~~ 141 (172)
+|+||..|+++..
T Consensus 131 ~Giit~~dil~~l 143 (148)
T 3lv9_A 131 SGVVTIEDILEEI 143 (148)
T ss_dssp EEEEEHHHHHHHH
T ss_pred EEEEEHHHHHHHH
Confidence 9999999998643
No 38
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.86 E-value=8.1e-10 Score=79.89 Aligned_cols=59 Identities=34% Similarity=0.503 Sum_probs=54.2
Q ss_pred CCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccce-eee
Q 030753 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL-LAL 140 (172)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dl-l~~ 140 (172)
+...+++++|++ ++.++.+++++.+++++|.+++++.+||+|++|+++|+|+.+|+ .+.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 64 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNL 64 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred cccCCHHHhhcC--CceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHH
Confidence 356799999998 89999999999999999999999999999988999999999999 653
No 39
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.86 E-value=5.1e-10 Score=82.67 Aligned_cols=59 Identities=29% Similarity=0.389 Sum_probs=54.4
Q ss_pred eEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeee
Q 030753 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
.+|+++|++++++.++.+++++.+++++|.+++++.+||+|++|+++|+||.+|+.+..
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 86 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVF 86 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHH
Confidence 58999998866789999999999999999999999999999889999999999998654
No 40
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.86 E-value=6e-10 Score=81.41 Aligned_cols=60 Identities=90% Similarity=1.399 Sum_probs=54.7
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeee
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~ 140 (172)
..++|+++|++..++.++.+++++.++++.|.+++++.+||+|++|+++|+|+.+|+++.
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~ 62 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLAL 62 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTC
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHh
Confidence 457899999986568999999999999999999999999999988999999999999754
No 41
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.86 E-value=7.2e-10 Score=83.30 Aligned_cols=90 Identities=21% Similarity=0.204 Sum_probs=68.1
Q ss_pred CCCCeeEecceeecc-ceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeecc----cCCCCCCCC
Q 030753 78 PSSGVYTVGDFMTTK-EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI----SGSGRADNS 152 (172)
Q Consensus 78 ~~~~~~~V~diM~~~-~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~----~~~~~~~~~ 152 (172)
..+..++|+++|+++ +++.++.+++++.+++++|.+++++.+||+|++|+++|+||.+|+.+.... .....+.+.
T Consensus 19 ~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 98 (165)
T 3fhm_A 19 FQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVA 98 (165)
T ss_dssp CSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGGTSBGGGT
T ss_pred HhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccccCCHHHH
Confidence 445778999999962 368999999999999999999999999999988999999999999865332 123445555
Q ss_pred CCcCc------cchhhhhhhh
Q 030753 153 MFPEV------DSTWKVYIQR 167 (172)
Q Consensus 153 m~~~~------~~l~~~l~~i 167 (172)
|.+.+ .++.+.++.+
T Consensus 99 m~~~~~~v~~~~~l~~a~~~m 119 (165)
T 3fhm_A 99 MTKNVVRCQHNSTTDQLMEIM 119 (165)
T ss_dssp SBSSCCCBCTTCBHHHHHHHH
T ss_pred hcCCCeEECCCCcHHHHHHHH
Confidence 54432 4455555444
No 42
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.85 E-value=2.7e-10 Score=82.68 Aligned_cols=88 Identities=14% Similarity=-0.007 Sum_probs=69.3
Q ss_pred cccchhhh-hccCceeeecCceeccCCCC-CCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccE
Q 030753 51 TSSDRVSA-LRRSSAVFASGTLTANSAAP-SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128 (172)
Q Consensus 51 r~~~~~~~-~~~~~~~~~~g~~~~~~~~~-~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~l 128 (172)
+++|+++. .+...|.+....+....... .....+++++| + ++.++.+++++.+++++|.++++..+||+|++|++
T Consensus 36 ~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~l 112 (130)
T 3hf7_A 36 GRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-D--EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDI 112 (130)
T ss_dssp SEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-B--CCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCE
T ss_pred CeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc-c--CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCE
Confidence 46677754 45666777666665543322 23456789999 5 68899999999999999999999999999988999
Q ss_pred EEEeeccceeeee
Q 030753 129 VGLVSDYDLLALD 141 (172)
Q Consensus 129 vGIVt~~Dll~~~ 141 (172)
+|+||..|+++..
T Consensus 113 vGiit~~Dil~~l 125 (130)
T 3hf7_A 113 QGLVTVEDILEEI 125 (130)
T ss_dssp EEEEEHHHHHHHH
T ss_pred EEEeeHHHHHHHH
Confidence 9999999998643
No 43
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.85 E-value=9.4e-10 Score=82.18 Aligned_cols=83 Identities=16% Similarity=0.148 Sum_probs=66.4
Q ss_pred cccchhhhhc-cCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 51 TSSDRVSALR-RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 51 r~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
.++|+++..+ ...|.+....+....... ...+++++|.+ +.++.+++++.+++++|.++++..+||+|++|+++
T Consensus 72 ~~~pVvd~~~~~lvGivt~~dl~~~~~~~--~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~ 146 (156)
T 3oi8_A 72 SRFPVIGEDKDEVLGILHAKDLLKYMFNP--EQFHLKSILRP---AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTS 146 (156)
T ss_dssp SEEEEESSSTTCEEEEEEGGGGGGGSSCG--GGCCHHHHCBC---CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEE
T ss_pred CEEEEEcCCCCcEEEEEEHHHHHHHHHcC--CcccHHHHcCC---CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEE
Confidence 4667777653 566666666665443221 56789999954 78999999999999999999999999999889999
Q ss_pred EEeecccee
Q 030753 130 GLVSDYDLL 138 (172)
Q Consensus 130 GIVt~~Dll 138 (172)
|+||..|++
T Consensus 147 Givt~~Dil 155 (156)
T 3oi8_A 147 GLVTFEDII 155 (156)
T ss_dssp EEEEHHHHC
T ss_pred EEEEHHHhc
Confidence 999999986
No 44
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.85 E-value=1.6e-10 Score=87.16 Aligned_cols=88 Identities=19% Similarity=0.258 Sum_probs=68.5
Q ss_pred ecccchhhhhccCceeeecCceeccCCC-----CCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecC
Q 030753 50 ATSSDRVSALRRSSAVFASGTLTANSAA-----PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD 124 (172)
Q Consensus 50 ~r~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~ 124 (172)
+.++|+++..+...|.++...+...... ......+++++|++ ++.++.+++++.+++++|.++++ +||+|+
T Consensus 48 ~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~ 123 (156)
T 3k6e_A 48 YTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKT--DVAVVSPDFTITEVLHKLVDESF--LPVVDA 123 (156)
T ss_dssp SSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCBC--SCCCBCTTCCHHHHHHHTTTSSE--EEEECT
T ss_pred CcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhcC--CceecccccHHHHHHHHHHHcCC--eEEEec
Confidence 4567788766666777766555432221 12245789999999 99999999999999999998876 999998
Q ss_pred CccEEEEeeccceeeee
Q 030753 125 DWKLVGLVSDYDLLALD 141 (172)
Q Consensus 125 ~~~lvGIVt~~Dll~~~ 141 (172)
+|+++|+||.+|+++..
T Consensus 124 ~g~l~GiiT~~Dil~~~ 140 (156)
T 3k6e_A 124 EGIFQGIITRKSILKAV 140 (156)
T ss_dssp TSBEEEEEEHHHHHHHH
T ss_pred CCEEEEEEEHHHHHHHH
Confidence 89999999999999754
No 45
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.85 E-value=9.7e-10 Score=79.38 Aligned_cols=85 Identities=13% Similarity=0.061 Sum_probs=67.0
Q ss_pred cccchhhhh-ccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 51 TSSDRVSAL-RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 51 r~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
+++|+++.. +...|.+....+..... ....+++++|.+ +.++.+++++.+++++|.++++..+||+|++|+++
T Consensus 39 ~~~pVvd~~~~~~~Givt~~dl~~~~~---~~~~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~ 112 (129)
T 3jtf_A 39 SRFPVYEDDRDNIIGILLAKDLLRYML---EPALDIRSLVRP---AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGIS 112 (129)
T ss_dssp SEEEEESSSTTCEEEEEEGGGGGGGGT---CTTSCGGGGCBC---CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEE
T ss_pred CEEEEEcCCCCcEEEEEEHHHHHhHhc---cCCcCHHHHhCC---CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEE
Confidence 456777764 56667776666654432 245689999954 78999999999999999999999999999889999
Q ss_pred EEeeccceeeee
Q 030753 130 GLVSDYDLLALD 141 (172)
Q Consensus 130 GIVt~~Dll~~~ 141 (172)
|+||..|+++..
T Consensus 113 Giit~~Dil~~l 124 (129)
T 3jtf_A 113 GLVTMEDVLEQI 124 (129)
T ss_dssp EEEEHHHHHHHH
T ss_pred EEEEHHHHHHHH
Confidence 999999998643
No 46
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.84 E-value=8.4e-10 Score=82.67 Aligned_cols=58 Identities=34% Similarity=0.488 Sum_probs=53.7
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeee
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~ 140 (172)
...+|+++|++ ++.++.+++++.+++++|.+++++.+||+|++|+++|+|+.+|+++.
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~ 60 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAA 60 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred CcCcHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHH
Confidence 34689999999 99999999999999999999999999999988999999999999864
No 47
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.83 E-value=1.3e-09 Score=78.40 Aligned_cols=72 Identities=21% Similarity=0.312 Sum_probs=59.2
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeeccc--CCCCCCCCCCc
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS--GSGRADNSMFP 155 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~--~~~~~~~~m~~ 155 (172)
...+|+++|++ ++.++.+++++.+++++|.+++++.+||+| +|+++|+|+.+|+.+..... ......+.|.+
T Consensus 2 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 2 EEEIVKEYMKT--QVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75 (133)
T ss_dssp CCCBGGGTSBC--SCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE
T ss_pred CcccHHHhccC--CCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC
Confidence 45689999999 899999999999999999999999999999 89999999999998643322 23445555543
No 48
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.83 E-value=4.5e-10 Score=83.22 Aligned_cols=88 Identities=17% Similarity=0.175 Sum_probs=69.6
Q ss_pred cccchhhhhccCceeeecCceeccCCCC--CCCeeEecceee------ccceeeeecccccHHHHHHHHHHhhhcCccee
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAAP--SSGVYTVGDFMT------TKEELHVVKPTTTVDEALEILVEKRITGFPVI 122 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~V~diM~------~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVv 122 (172)
+++|+++..+...|.++...+....... .....++.++|. + ++.++.+++++.+++++|.++++..+||+
T Consensus 53 ~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 130 (152)
T 2uv4_A 53 SALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFE--GVLKCYLHETLETIINRLVEAEVHRLVVV 130 (152)
T ss_dssp SEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGGGTCCHHHH--TCSEECTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred ceEeEECCCCcEEEEEeHHHHHHHhcchhhhhhcchHHHHHhhhhcccC--CCeEECCCCcHHHHHHHHHHcCCeEEEEE
Confidence 4667777667777777666654432211 123568999997 5 78999999999999999999999999999
Q ss_pred cCCccEEEEeeccceeee
Q 030753 123 DDDWKLVGLVSDYDLLAL 140 (172)
Q Consensus 123 d~~~~lvGIVt~~Dll~~ 140 (172)
|++|+++|+||..|+++.
T Consensus 131 d~~g~~vGiit~~dil~~ 148 (152)
T 2uv4_A 131 DENDVVKGIVSLSDILQA 148 (152)
T ss_dssp CTTSBEEEEEEHHHHHHH
T ss_pred CCCCeEEEEEEHHHHHHH
Confidence 988999999999998864
No 49
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.82 E-value=9e-10 Score=79.79 Aligned_cols=89 Identities=21% Similarity=0.241 Sum_probs=71.8
Q ss_pred cccchhhhhccCceeeecCceeccCC-CCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSA-APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
+++++++..+...|.++...+....+ .......+++++|.+ ++.++.+++++.+++++|.+++++.+ |+|++|+++
T Consensus 39 ~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~ 115 (138)
T 2yzi_A 39 GSLVVINDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIMTR--NLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIV 115 (138)
T ss_dssp SEEEEECTTSCEEEEEEHHHHHHHTTTTCCCTTSBGGGTCBC--SCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEE
T ss_pred CEEEEEcCCCcEEEEEeHHHHHHHHHhcCCcccCCHHHHhhC--CCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEE
Confidence 45677776677777777777653222 222356789999998 89999999999999999999999999 999789999
Q ss_pred EEeeccceeeeec
Q 030753 130 GLVSDYDLLALDS 142 (172)
Q Consensus 130 GIVt~~Dll~~~~ 142 (172)
|+||..|+++...
T Consensus 116 Giit~~dil~~~~ 128 (138)
T 2yzi_A 116 GIFTLSDLLEASR 128 (138)
T ss_dssp EEEEHHHHHHHHH
T ss_pred EEEEHHHHHHHHH
Confidence 9999999986544
No 50
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.82 E-value=8.6e-10 Score=81.12 Aligned_cols=88 Identities=13% Similarity=0.238 Sum_probs=70.5
Q ss_pred cccchhhhhccCceeeecCceeccCCC------CCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecC
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAA------PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD 124 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~ 124 (172)
+++|+++..+...|.++...+...... ......+++++|.+ ++.++.+++++.+++++|.++++ +||+|+
T Consensus 49 ~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~ 124 (150)
T 3lqn_A 49 SAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQVMKQ--DIPVLKLEDSFAKALEMTIDHPF--ICAVNE 124 (150)
T ss_dssp SEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGGTCBS--SCCEEETTCBHHHHHHHHHHCSE--EEEECT
T ss_pred cEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHHHhcC--CCceeCCCCCHHHHHHHHHhCCE--EEEECC
Confidence 456777777777777766666544321 12356789999998 89999999999999999999997 999998
Q ss_pred CccEEEEeeccceeeeec
Q 030753 125 DWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 125 ~~~lvGIVt~~Dll~~~~ 142 (172)
+|+++|+||..|+++...
T Consensus 125 ~g~~~Giit~~dil~~l~ 142 (150)
T 3lqn_A 125 DGYFEGILTRRAILKLLN 142 (150)
T ss_dssp TCBEEEEEEHHHHHHHHH
T ss_pred CCcEEEEEEHHHHHHHHH
Confidence 899999999999986543
No 51
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.82 E-value=1.8e-09 Score=82.54 Aligned_cols=85 Identities=22% Similarity=0.190 Sum_probs=66.0
Q ss_pred eeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeecc----cCCCCCCCCCCcCc
Q 030753 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI----SGSGRADNSMFPEV 157 (172)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~----~~~~~~~~~m~~~~ 157 (172)
..+|+++|++ +++++.+++++.+++++|.+++++.+||+|++|+++|+|+.+|+++.... .........|.+.+
T Consensus 8 ~~~v~~im~~--~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 85 (184)
T 1pvm_A 8 FMRVEKIMNS--NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPI 85 (184)
T ss_dssp CCBGGGTSBT--TCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSSC
T ss_pred ccCHHHhcCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCCC
Confidence 3689999998 99999999999999999999999999999877999999999999865331 22445555665432
Q ss_pred ------cchhhhhhhhc
Q 030753 158 ------DSTWKVYIQRG 168 (172)
Q Consensus 158 ------~~l~~~l~~i~ 168 (172)
.++.+.++.+.
T Consensus 86 ~~v~~~~~l~~a~~~m~ 102 (184)
T 1pvm_A 86 PKVKSDYDVKDVAAYLS 102 (184)
T ss_dssp CEEETTCBHHHHHHHHH
T ss_pred cEECCCCCHHHHHHHHH
Confidence 44555555443
No 52
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.82 E-value=5.9e-10 Score=80.28 Aligned_cols=88 Identities=18% Similarity=0.318 Sum_probs=70.4
Q ss_pred cccchhhhhccCceeeecCceeccCCC--CCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccE
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAA--PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~l 128 (172)
+++++++..+...|.++...+....+. ......+++++|.+ ++.++.+++++.+++++|.+++++.+||+|+ |++
T Consensus 40 ~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~ 116 (133)
T 1y5h_A 40 GALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARD--SIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRL 116 (133)
T ss_dssp SEEEEECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTT--CCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEE
T ss_pred CeEEEECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcC--CCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEE
Confidence 456777666777777777666532221 12245789999998 8999999999999999999999999999996 899
Q ss_pred EEEeeccceeeee
Q 030753 129 VGLVSDYDLLALD 141 (172)
Q Consensus 129 vGIVt~~Dll~~~ 141 (172)
+|+||..|+++..
T Consensus 117 ~Giit~~dil~~l 129 (133)
T 1y5h_A 117 VGIVTEADIARHL 129 (133)
T ss_dssp EEEEEHHHHHHTC
T ss_pred EEEEEHHHHHHHH
Confidence 9999999998643
No 53
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.81 E-value=2.4e-10 Score=85.97 Aligned_cols=89 Identities=21% Similarity=0.215 Sum_probs=71.6
Q ss_pred cccchhhhhccCceeeecCceeccCCCC--CCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccE
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAAP--SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~l 128 (172)
+++++++..+...|.++...+...-... .....+++++|.+ ++.++.+++++.+++++|.++++..+||+|+ |++
T Consensus 59 ~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~ 135 (165)
T 3fhm_A 59 GAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTK--NVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRL 135 (165)
T ss_dssp SEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGGTSBGGGTSBS--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEE
T ss_pred CEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccccCCHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEE
Confidence 4567777777777777666664432211 2345789999998 9999999999999999999999999999997 999
Q ss_pred EEEeeccceeeeec
Q 030753 129 VGLVSDYDLLALDS 142 (172)
Q Consensus 129 vGIVt~~Dll~~~~ 142 (172)
+|+||..|+++...
T Consensus 136 ~Giit~~dil~~~~ 149 (165)
T 3fhm_A 136 AGIISIGDVVKARI 149 (165)
T ss_dssp EEEEEHHHHHHHTT
T ss_pred EEEEEHHHHHHHHH
Confidence 99999999987544
No 54
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.81 E-value=3.6e-10 Score=80.30 Aligned_cols=87 Identities=22% Similarity=0.245 Sum_probs=67.5
Q ss_pred cccchhhhhccCceeeecCceeccCCC-CCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAA-PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
+++++++ .+...|.++...+...... ......+++++|.+ ++.++.+++++.++++.|.+++++.+||+|+ |+++
T Consensus 33 ~~~~Vvd-~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~ 108 (125)
T 1pbj_A 33 GSSVVVK-EGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMER--DLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEII 108 (125)
T ss_dssp CEEEEEE-TTEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBC--GGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEE
T ss_pred CEEEEEe-CCeeEEEEeHHHHHHHHhcCCcccccCHHHHcCC--CCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEE
Confidence 3556666 5555666655555422111 12246789999998 8999999999999999999999999999997 9999
Q ss_pred EEeeccceeeee
Q 030753 130 GLVSDYDLLALD 141 (172)
Q Consensus 130 GIVt~~Dll~~~ 141 (172)
|+||.+|+++..
T Consensus 109 Gvit~~dl~~~l 120 (125)
T 1pbj_A 109 GVISATDILRAK 120 (125)
T ss_dssp EEEEHHHHHHHH
T ss_pred EEEEHHHHHHHH
Confidence 999999998643
No 55
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.80 E-value=1.5e-09 Score=81.05 Aligned_cols=73 Identities=25% Similarity=0.206 Sum_probs=59.3
Q ss_pred CCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeecc---cCCCCCCCCCCc
Q 030753 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI---SGSGRADNSMFP 155 (172)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~---~~~~~~~~~m~~ 155 (172)
+..++|+++|++ . +++.+++++.+++++|.+++++.+||+|++|+++|+||.+|+.+.... .....+.+.|.+
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~ 89 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTR 89 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSEE
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCcccCcCHHHHHcC
Confidence 356799999987 5 589999999999999999999999999988999999999999875422 123455555553
No 56
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.80 E-value=4.4e-10 Score=83.49 Aligned_cols=87 Identities=13% Similarity=0.099 Sum_probs=67.7
Q ss_pred cccchh-hh-hccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccE
Q 030753 51 TSSDRV-SA-LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128 (172)
Q Consensus 51 r~~~~~-~~-~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~l 128 (172)
+++|++ +. .+...|.+....+....... ...+++++| + ++.++.+++++.+++++|.++++..+||+|++|++
T Consensus 54 ~~~pVv~d~~~~~lvGivt~~dl~~~~~~~--~~~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~ 128 (153)
T 3oco_A 54 SRFPVTADNDKDKIIGYAYNYDIVRQARID--DKAKISTIM-R--DIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGT 128 (153)
T ss_dssp SEEEEEETTEEEEEEEEEEHHHHHHHHHHH--TTSBGGGTC-B--CCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCE
T ss_pred CEEEEEECCCCCcEEEEEEHHHHHhHHhcC--CCCcHHHHh-C--CCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCE
Confidence 456777 43 35556666555554332111 256899999 7 89999999999999999999999999999988999
Q ss_pred EEEeeccceeeeec
Q 030753 129 VGLVSDYDLLALDS 142 (172)
Q Consensus 129 vGIVt~~Dll~~~~ 142 (172)
+|+||..|+++...
T Consensus 129 vGivt~~dil~~l~ 142 (153)
T 3oco_A 129 SGIITDKDVYEELF 142 (153)
T ss_dssp EEEECHHHHHHHHH
T ss_pred EEEeeHHHHHHHHh
Confidence 99999999997544
No 57
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.80 E-value=7.4e-10 Score=80.08 Aligned_cols=86 Identities=21% Similarity=0.285 Sum_probs=67.4
Q ss_pred ccchhhhhccCceeeecCceeccCCC--CCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 52 SSDRVSALRRSSAVFASGTLTANSAA--PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 52 ~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
++++++ .+...|.++...+..+... ......+++++|.+ ++.++.+++++.+++++|.+++++.+||+| +|+++
T Consensus 42 ~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~ 117 (135)
T 2rc3_A 42 ALLVMK-DEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTR--QVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVI 117 (135)
T ss_dssp EEEEEE-TTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEE
T ss_pred EEEEEE-CCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccC--CCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEE
Confidence 456665 5555666655555432221 12356799999999 999999999999999999999999999999 79999
Q ss_pred EEeeccceeeee
Q 030753 130 GLVSDYDLLALD 141 (172)
Q Consensus 130 GIVt~~Dll~~~ 141 (172)
|+||..|+++..
T Consensus 118 Giit~~dll~~~ 129 (135)
T 2rc3_A 118 GLLSIGDLVKDA 129 (135)
T ss_dssp EEEEHHHHHHHH
T ss_pred EEEEHHHHHHHH
Confidence 999999998654
No 58
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.80 E-value=9.9e-10 Score=84.05 Aligned_cols=90 Identities=17% Similarity=0.144 Sum_probs=70.4
Q ss_pred cccchhhhhccCceeeecCceeccCC--CCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccE
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSA--APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~l 128 (172)
+.+++++..+...|.++...+..... .......+++++|.+ ++.++.+++++.+++++|.+++++.+||+|++|++
T Consensus 41 ~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~ 118 (184)
T 1pvm_A 41 YGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRK--PIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRV 118 (184)
T ss_dssp CEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBS--SCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCE
T ss_pred CEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCC--CCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeE
Confidence 34666765566666665555543322 113356789999998 89999999999999999999999999999987999
Q ss_pred EEEeeccceeeeec
Q 030753 129 VGLVSDYDLLALDS 142 (172)
Q Consensus 129 vGIVt~~Dll~~~~ 142 (172)
+|+||..|+++...
T Consensus 119 ~Givt~~dll~~~~ 132 (184)
T 1pvm_A 119 VGIVTLTDLSRYLS 132 (184)
T ss_dssp EEEEEHHHHTTTSC
T ss_pred EEEEEHHHHHHHHH
Confidence 99999999986543
No 59
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.79 E-value=2.3e-09 Score=69.39 Aligned_cols=62 Identities=23% Similarity=0.313 Sum_probs=50.1
Q ss_pred eeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeeccc----CCCCCCCCCCcCc
Q 030753 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS----GSGRADNSMFPEV 157 (172)
Q Consensus 95 ~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~----~~~~~~~~m~~~~ 157 (172)
+.++.+++++.+++++|.+++++.+||+|+ |+++|+||.+|+++..... .....+++|.+.+
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 67 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNP 67 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCC
Confidence 578999999999999999999999999996 9999999999998764332 2345555665443
No 60
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.79 E-value=8.9e-10 Score=81.47 Aligned_cols=88 Identities=10% Similarity=0.154 Sum_probs=69.4
Q ss_pred cccchhhhhccCceeeecCceeccCCC------CCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecC
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAA------PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD 124 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~ 124 (172)
+.+|+++..+...|.++...+...... ......+++++|.+ ++.++.+++++.+++++|.++++ +||+|+
T Consensus 45 ~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~ 120 (157)
T 2emq_A 45 SAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEEVMNR--NIPRLRLDDSLMKAVGLIVNHPF--VCVEND 120 (157)
T ss_dssp SEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGGTCBC--CCCEEETTSBHHHHHHHHHHSSE--EEEECS
T ss_pred eEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHHHhCC--CCceecCCCcHHHHHHHHhhCCE--EEEEcC
Confidence 456777766666777766665443221 11246789999999 99999999999999999999988 999998
Q ss_pred CccEEEEeeccceeeeec
Q 030753 125 DWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 125 ~~~lvGIVt~~Dll~~~~ 142 (172)
+|+++|+||.+|+++...
T Consensus 121 ~g~~~Giit~~dil~~~~ 138 (157)
T 2emq_A 121 DGYFAGIFTRREVLKQLN 138 (157)
T ss_dssp SSSEEEEEEHHHHHHHHH
T ss_pred CCeEEEEEEHHHHHHHHH
Confidence 899999999999986544
No 61
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.78 E-value=2.8e-09 Score=85.63 Aligned_cols=60 Identities=32% Similarity=0.474 Sum_probs=55.1
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeec
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~ 142 (172)
...+++++|++ ++.++.+++++.+++++|.++++.++||+|++|+++|+||.+|+++...
T Consensus 219 ~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~~ 278 (282)
T 2yzq_A 219 PNKPVAEIMTR--DVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLV 278 (282)
T ss_dssp CCCBGGGTCBS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGGC
T ss_pred ccCCHHHhcCC--CCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHHH
Confidence 45789999999 9999999999999999999999999999997789999999999987543
No 62
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.78 E-value=8.5e-10 Score=82.63 Aligned_cols=88 Identities=19% Similarity=0.277 Sum_probs=68.3
Q ss_pred cccchhhhhccCceeeecCceeccCC---------CCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcce
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSA---------APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPV 121 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~---------~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPV 121 (172)
+++|+++..+...|.++...+..... .......++.++|.+ ++.++.+++++.+++++|.++++..+||
T Consensus 37 ~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpV 114 (160)
T 2o16_A 37 RHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFEVMHT--DVTSVAPQAGLKESAIYMQKHKIGCLPV 114 (160)
T ss_dssp SEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHHHSCS--CEEEBCTTSBHHHHHHHHHHTTCSCEEE
T ss_pred CEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHHHhcC--CCeEECCCCCHHHHHHHHHHhCCCEEEE
Confidence 35667766666666666655543211 012346789999998 9999999999999999999999999999
Q ss_pred ecCCccEEEEeeccceeeee
Q 030753 122 IDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 122 vd~~~~lvGIVt~~Dll~~~ 141 (172)
+|+ |+++|+||..||++..
T Consensus 115 vd~-g~lvGiit~~dil~~~ 133 (160)
T 2o16_A 115 VAK-DVLVGIITDSDFVTIA 133 (160)
T ss_dssp EET-TEEEEEECHHHHHHHH
T ss_pred EEC-CEEEEEEEHHHHHHHH
Confidence 997 9999999999998653
No 63
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.77 E-value=2.2e-09 Score=85.59 Aligned_cols=59 Identities=27% Similarity=0.465 Sum_probs=50.0
Q ss_pred CeeEecceee-ccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeee
Q 030753 81 GVYTVGDFMT-TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 81 ~~~~V~diM~-~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
...+++++|+ + ++.++.+++++.+++++|.+++++.+||+|++|+++|+||.+|+++..
T Consensus 183 ~~~~v~~im~~~--~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 183 QSLPVDYVMTKD--NLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp GGSBHHHHSBCT--TCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC------
T ss_pred cCCceeeEecCC--ccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 3568999999 6 899999999999999999999999999999889999999999998643
No 64
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.77 E-value=2.6e-09 Score=77.87 Aligned_cols=72 Identities=18% Similarity=0.139 Sum_probs=58.9
Q ss_pred eeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCc--cEEEEeeccceeeeeccc--CCCCCCCCCCc
Q 030753 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW--KLVGLVSDYDLLALDSIS--GSGRADNSMFP 155 (172)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~--~lvGIVt~~Dll~~~~~~--~~~~~~~~m~~ 155 (172)
..+|+++|++ ++.++.+++++.+++++|.+++++.+||+|+++ +++|+|+.+|+++..... ......+.|.+
T Consensus 4 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~ 79 (141)
T 2rih_A 4 AIRTSELLKR--PPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPIANS 79 (141)
T ss_dssp -CBGGGGCCS--CCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBC
T ss_pred ceEHHHHhcC--CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCC
Confidence 4589999998 999999999999999999999999999999877 999999999998653221 23445555544
No 65
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.75 E-value=2.4e-09 Score=77.31 Aligned_cols=83 Identities=19% Similarity=0.270 Sum_probs=62.0
Q ss_pred Eecceeecc-ceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeee-ecc---cCCCCCCCCCCcCc-
Q 030753 84 TVGDFMTTK-EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL-DSI---SGSGRADNSMFPEV- 157 (172)
Q Consensus 84 ~V~diM~~~-~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~-~~~---~~~~~~~~~m~~~~- 157 (172)
+|+++|+++ .++.++.+++++.++++.|.+++++.+||+| +|+++|+|+.+|+++. ... .......+.|.+.+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~ 85 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVA 85 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCSCC
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCCCe
Confidence 899999921 2899999999999999999999999999998 7999999999999852 221 12444555554432
Q ss_pred -----cchhhhhhhh
Q 030753 158 -----DSTWKVYIQR 167 (172)
Q Consensus 158 -----~~l~~~l~~i 167 (172)
.++.+.++.+
T Consensus 86 ~v~~~~~l~~~~~~m 100 (135)
T 2rc3_A 86 YVDLNNTNEDCMALI 100 (135)
T ss_dssp CBCTTCBHHHHHHHH
T ss_pred EECCCCcHHHHHHHH
Confidence 3445555444
No 66
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.75 E-value=9.3e-10 Score=78.12 Aligned_cols=55 Identities=25% Similarity=0.379 Sum_probs=51.2
Q ss_pred EecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeee
Q 030753 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
+|+++|++ ++.++.+++++.++++.|.+++++.+||+| +|+++|+|+.+|+.+..
T Consensus 2 ~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~ 56 (125)
T 1pbj_A 2 RVEDVMVT--DVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAI 56 (125)
T ss_dssp CHHHHCBC--SCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHH
T ss_pred CHHHhcCC--CceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHH
Confidence 68899998 999999999999999999999999999999 89999999999998543
No 67
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.75 E-value=2e-09 Score=84.83 Aligned_cols=82 Identities=20% Similarity=0.148 Sum_probs=66.6
Q ss_pred cchhhhhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEe
Q 030753 53 SDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132 (172)
Q Consensus 53 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIV 132 (172)
.++++..+...|.++...+.. .....+++++|++ ++.++.+++++.+++++|.++++..+||+|++|+++|+|
T Consensus 91 ~~Vvd~~~~lvGivt~~dll~-----~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiI 163 (205)
T 3kxr_A 91 LFIVDEADKYLGTVRRYDIFK-----HEPHEPLISLLSE--DSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRV 163 (205)
T ss_dssp EEEECTTCBEEEEEEHHHHTT-----SCTTSBGGGGCCS--SCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEE
T ss_pred EEEEcCCCeEEEEEEHHHHHh-----CCCcchHHHHhcC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEE
Confidence 355665666666665444432 2345689999998 899999999999999999999999999999889999999
Q ss_pred eccceeeee
Q 030753 133 SDYDLLALD 141 (172)
Q Consensus 133 t~~Dll~~~ 141 (172)
|..|++...
T Consensus 164 T~~Dil~~i 172 (205)
T 3kxr_A 164 TLRAATALV 172 (205)
T ss_dssp EHHHHHHHH
T ss_pred EHHHHHHHH
Confidence 999998654
No 68
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.74 E-value=1.4e-09 Score=80.71 Aligned_cols=88 Identities=25% Similarity=0.341 Sum_probs=68.7
Q ss_pred ccchhhhhccCceeeecCceeccCCC--CCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 52 SSDRVSALRRSSAVFASGTLTANSAA--PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 52 ~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
++++.+ .+...|.++...+...-.. ......+++++|.+ ++.++.+++++.+++++|.+++++.+||+| +|+++
T Consensus 46 ~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~ 121 (157)
T 4fry_A 46 ALLVVD-GDDIAGIVTERDYARKVVLQERSSKATRVEEIMTA--KVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLI 121 (157)
T ss_dssp EEEEES-SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSBS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEE
T ss_pred EEEEee-CCEEEEEEEHHHHHHHHHhccCCccccCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEE
Confidence 445533 5555666666555443321 12356799999999 899999999999999999999999999999 79999
Q ss_pred EEeeccceeeeecc
Q 030753 130 GLVSDYDLLALDSI 143 (172)
Q Consensus 130 GIVt~~Dll~~~~~ 143 (172)
|+||.+|+++....
T Consensus 122 Giit~~dil~~l~~ 135 (157)
T 4fry_A 122 GLISIGDLVKSVIA 135 (157)
T ss_dssp EEEEHHHHHHHHHT
T ss_pred EEEEHHHHHHHHHH
Confidence 99999999976543
No 69
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.74 E-value=7.1e-10 Score=82.22 Aligned_cols=88 Identities=19% Similarity=0.253 Sum_probs=67.7
Q ss_pred cccchhhhhccCceeeecCceeccCCCCC-----CCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAAPS-----SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD 125 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~ 125 (172)
+++++++..+...|.++...+........ ....+++++|.+ ++.++.+++++.+++++|.+++ .+||+|++
T Consensus 49 ~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~ 124 (156)
T 3ctu_A 49 TRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKT--DVAVVSPDFTITEVLHKLVDES--FLPVVDAE 124 (156)
T ss_dssp SEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGGCBC--SCCCBCSSCCHHHHHHHTTTSS--EEEEECTT
T ss_pred ceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHHhccC--CceeeCCCCcHHHHHHHHHHcC--eEEEEcCC
Confidence 45677776666667766666544322111 125789999998 8999999999999999999887 69999988
Q ss_pred ccEEEEeeccceeeeec
Q 030753 126 WKLVGLVSDYDLLALDS 142 (172)
Q Consensus 126 ~~lvGIVt~~Dll~~~~ 142 (172)
|+++|+||..|+++...
T Consensus 125 g~~~Giit~~dil~~l~ 141 (156)
T 3ctu_A 125 GIFQGIITRKSILKAVN 141 (156)
T ss_dssp SBEEEEEETTHHHHHHH
T ss_pred CeEEEEEEHHHHHHHHH
Confidence 99999999999997544
No 70
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.73 E-value=1.1e-09 Score=81.50 Aligned_cols=88 Identities=11% Similarity=0.135 Sum_probs=69.4
Q ss_pred cccchhhhhccCceeeecCceeccCCCCC------CCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecC
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAAPS------SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD 124 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~ 124 (172)
+++|+++..+...|.++...+........ ....+++++|.+ ++.++.+++++.+++++|.++++ +||+|+
T Consensus 48 ~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~ 123 (159)
T 1yav_A 48 TAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVMLT--DIPRLHINDPIMKGFGMVINNGF--VCVEND 123 (159)
T ss_dssp SEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHHHSBC--SCCEEETTSBHHHHHHHTTTCSE--EEEECT
T ss_pred cEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHHhcCC--CCceEcCCCCHHHHHHHHHhCCE--EEEEeC
Confidence 45677776666667776666544322211 356789999999 89999999999999999999987 999998
Q ss_pred CccEEEEeeccceeeeec
Q 030753 125 DWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 125 ~~~lvGIVt~~Dll~~~~ 142 (172)
+|+++|+||..|+++...
T Consensus 124 ~g~~vGiit~~dil~~~~ 141 (159)
T 1yav_A 124 EQVFEGIFTRRVVLKELN 141 (159)
T ss_dssp TCBEEEEEEHHHHHHHHH
T ss_pred CCeEEEEEEHHHHHHHHH
Confidence 899999999999986543
No 71
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.72 E-value=2e-09 Score=81.50 Aligned_cols=60 Identities=13% Similarity=0.229 Sum_probs=55.2
Q ss_pred CCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeec
Q 030753 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~ 142 (172)
....+++++|.+ ++.++.+++++.+++++|.++++..+||+| +|+++|+||..|+++...
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~ 164 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIA 164 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 356899999998 899999999999999999999999999999 799999999999997544
No 72
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.72 E-value=4.3e-09 Score=83.90 Aligned_cols=58 Identities=22% Similarity=0.396 Sum_probs=54.1
Q ss_pred eeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeee
Q 030753 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
..+|+|+|++ ++.++.+++++.+|+++|.+++++.+||+|++|+++|+||..|+.+..
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~ 63 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATY 63 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHH
Confidence 4589999998 999999999999999999999999999999889999999999998654
No 73
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.71 E-value=1.4e-09 Score=78.86 Aligned_cols=91 Identities=15% Similarity=0.195 Sum_probs=67.8
Q ss_pred cccchhhhhccCceeeecCceeccCCCC--CCCeeEecceeeccc----eeeeecccccHHHHHHHHHHhhhcCcceecC
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAAP--SSGVYTVGDFMTTKE----ELHVVKPTTTVDEALEILVEKRITGFPVIDD 124 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~V~diM~~~~----~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~ 124 (172)
+++++++..+...|.++...+....... .....++.++|.+.. ++.++.+++++.+++++|.++++..+||+|+
T Consensus 43 ~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 122 (144)
T 2nyc_A 43 SSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 122 (144)
T ss_dssp SEEEEECTTCBEEEEEEHHHHHHHHHTC----CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred ceeeEEcCCCcEEEEEcHHHHHHHhcccccccCCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECC
Confidence 4567777666666776666554332211 123568999997621 4789999999999999999999999999998
Q ss_pred CccEEEEeeccceeeee
Q 030753 125 DWKLVGLVSDYDLLALD 141 (172)
Q Consensus 125 ~~~lvGIVt~~Dll~~~ 141 (172)
+|+++|+||..|+++..
T Consensus 123 ~g~~~Giit~~dil~~l 139 (144)
T 2nyc_A 123 VGRLVGVLTLSDILKYI 139 (144)
T ss_dssp TSBEEEEEEHHHHHHHH
T ss_pred CCCEEEEEEHHHHHHHH
Confidence 89999999999998654
No 74
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.69 E-value=9.9e-09 Score=80.78 Aligned_cols=84 Identities=13% Similarity=0.157 Sum_probs=64.8
Q ss_pred CCeeEecceeeccceeeeecccccHHHHHHHHHHh---hhcCcceecCCccEEEEeeccceeeeecccCCCCCCCCCCcC
Q 030753 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK---RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156 (172)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~---~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~~~~~~~~~m~~~ 156 (172)
+...+++++|++ +++++.+++++.++++.|.++ +++.+||+|++|+++|+|+.+|++... ....+..+|.++
T Consensus 51 ~~~~~v~~iM~~--~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~---~~~~v~~im~~~ 125 (205)
T 3kxr_A 51 YSENEIGRYTDH--QMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHE---PHEPLISLLSED 125 (205)
T ss_dssp SCTTCGGGGCBC--CCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSC---TTSBGGGGCCSS
T ss_pred CCcchHHhhccC--ceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCC---CcchHHHHhcCC
Confidence 456689999999 999999999999999999987 788999999889999999999998532 233445555432
Q ss_pred ------ccchhhhhhhhc
Q 030753 157 ------VDSTWKVYIQRG 168 (172)
Q Consensus 157 ------~~~l~~~l~~i~ 168 (172)
-.++.+.++.++
T Consensus 126 ~~~v~~~~~l~~a~~~m~ 143 (205)
T 3kxr_A 126 SRALTANTTLLDAAEAIE 143 (205)
T ss_dssp CCCEETTSCHHHHHHHHH
T ss_pred CeEECCCCCHHHHHHHHH
Confidence 244455555444
No 75
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.69 E-value=5.4e-09 Score=85.34 Aligned_cols=60 Identities=23% Similarity=0.418 Sum_probs=54.6
Q ss_pred CCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC--ccEEEEeeccceeee
Q 030753 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD--WKLVGLVSDYDLLAL 140 (172)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~--~~lvGIVt~~Dll~~ 140 (172)
....++|+|+|++ +++++.+++++.+++++|.+++++.+||||++ ++++|+|+.+||+++
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~ 70 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGL 70 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHH
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHH
Confidence 3467799999999 99999999999999999999999999999864 689999999999864
No 76
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.65 E-value=4e-09 Score=79.77 Aligned_cols=61 Identities=30% Similarity=0.465 Sum_probs=53.3
Q ss_pred CCeeEecceeeccce--eeee--cccccHHHHHHHHHHhhhcCccee--cCCccEEEEeeccceeee
Q 030753 80 SGVYTVGDFMTTKEE--LHVV--KPTTTVDEALEILVEKRITGFPVI--DDDWKLVGLVSDYDLLAL 140 (172)
Q Consensus 80 ~~~~~V~diM~~~~~--~~~v--~~~~sl~eal~~m~~~~i~~lPVv--d~~~~lvGIVt~~Dll~~ 140 (172)
....+|+++|++..+ ++++ .+++++.+++++|.+++++.+||+ |++|+++|+|+.+|+++.
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~ 74 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIIS 74 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHH
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHH
Confidence 356799999998211 7888 999999999999999999999999 677999999999999865
No 77
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.65 E-value=6.6e-09 Score=92.51 Aligned_cols=87 Identities=21% Similarity=0.240 Sum_probs=68.3
Q ss_pred CCeeEecceeeccceeeeeccc-ccHHHHHHHHHHhhhcCcceec-CCccEEEEeeccceeeeecc---cCCCCCCCCCC
Q 030753 80 SGVYTVGDFMTTKEELHVVKPT-TTVDEALEILVEKRITGFPVID-DDWKLVGLVSDYDLLALDSI---SGSGRADNSMF 154 (172)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~-~sl~eal~~m~~~~i~~lPVvd-~~~~lvGIVt~~Dll~~~~~---~~~~~~~~~m~ 154 (172)
+...+|+++|++ +++++.++ +++.+++++|.+++++.+||+| ++++++|+||.+||++.... .....+.++|.
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im~ 458 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKALN 458 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGEE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHhc
Confidence 456899999998 99999999 9999999999999999999999 67999999999999865432 22455666665
Q ss_pred cCc------cchhhhhhhhc
Q 030753 155 PEV------DSTWKVYIQRG 168 (172)
Q Consensus 155 ~~~------~~l~~~l~~i~ 168 (172)
.++ +++.+.++.+.
T Consensus 459 ~~~~~v~~~~~l~~a~~~m~ 478 (527)
T 3pc3_A 459 KRVIRLNESEILGKLARVLE 478 (527)
T ss_dssp TTCCEEETTSBHHHHHHHHT
T ss_pred CCCeEECCCCcHHHHHHHHh
Confidence 433 44555555443
No 78
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.65 E-value=2.4e-08 Score=78.55 Aligned_cols=71 Identities=24% Similarity=0.276 Sum_probs=58.7
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeecccCCCCCCCCCCcC
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~~~~~~~~~m~~~ 156 (172)
...+++++|.+ ++.++.+++++.+++++|.+++++.+||+|++++++|+||.+|+.+... ...+.+.|.++
T Consensus 11 ~~~~~~~~~~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~---~~~v~~im~~~ 81 (213)
T 1vr9_A 11 HHMKVKKWVTQ--DFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL---DSSVFNKVSLP 81 (213)
T ss_dssp --CBGGGGCBS--CSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT---TSBSGGGCBCT
T ss_pred cccCHHHhhcC--CCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC---CCcHHHHccCC
Confidence 34578999999 9999999999999999999999999999997899999999999986433 33455556543
No 79
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.64 E-value=5.8e-09 Score=85.96 Aligned_cols=83 Identities=16% Similarity=0.185 Sum_probs=67.4
Q ss_pred ccchhhhhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEE
Q 030753 52 SSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131 (172)
Q Consensus 52 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGI 131 (172)
.+++++..++..|.++...++. .....+++++|.+ ++.++.+++++.+++++|.++++..+||+|++|+++|+
T Consensus 175 ~~pVvd~~~~lvGivt~~dll~-----~~~~~~v~~im~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGi 247 (286)
T 2oux_A 175 YVYVVDQENHLVGVISLRDLIV-----NDDDTLIADILNE--RVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGI 247 (286)
T ss_dssp EEEEECTTCBEEEEEEHHHHTT-----SCTTSBHHHHSBS--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEE
T ss_pred EEEEEcCCCeEEEEEEHHHHHc-----CCCCCcHHHHcCC--CCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEE
Confidence 4567766665555554444432 2356789999998 89999999999999999999999999999988999999
Q ss_pred eeccceeeee
Q 030753 132 VSDYDLLALD 141 (172)
Q Consensus 132 Vt~~Dll~~~ 141 (172)
||..|++...
T Consensus 248 IT~~Dil~~i 257 (286)
T 2oux_A 248 VTVDDIIDVI 257 (286)
T ss_dssp EEHHHHHHHH
T ss_pred EEHHHHHHHH
Confidence 9999998653
No 80
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.64 E-value=1.5e-08 Score=92.33 Aligned_cols=56 Identities=21% Similarity=0.045 Sum_probs=50.5
Q ss_pred EecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeec
Q 030753 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~ 142 (172)
+++++|++ ++.++++++++.+++++|.+++++.+||+ ++|+++||||.+|+++...
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKLVGIVEREDVAYGYS 624 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEEEEEEEGGGTEECCC
T ss_pred ccchhhcC--CCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEEEEEEehhhHHHHHh
Confidence 38899999 99999999999999999999999999999 5799999999999987544
No 81
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.63 E-value=2.9e-08 Score=79.68 Aligned_cols=99 Identities=15% Similarity=0.143 Sum_probs=67.9
Q ss_pred ecccchhhhhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 50 ATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 50 ~r~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
++.+|+++..+...|.+. ..++.......+++++|.+ ++.++.+++++.++++.|.+++++.+||+|++|+++
T Consensus 32 ~~~~pV~d~~~~~~Giv~-----~~dl~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~ 104 (282)
T 2yzq_A 32 VRSFPVVNKEGKLVGIIS-----VKRILVNPDEEQLAMLVKR--DVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPV 104 (282)
T ss_dssp CCEEEEECTTCCEEEEEE-----SSCC----------CCCBS--CCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEE
T ss_pred CCeEEEEcCCCcEEEEEE-----HHHHHhhhccCCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEE
Confidence 456777775554445443 3333333356789999998 899999999999999999999999999999889999
Q ss_pred EEeeccceee-eeccc---CCCCCCCCCCc
Q 030753 130 GLVSDYDLLA-LDSIS---GSGRADNSMFP 155 (172)
Q Consensus 130 GIVt~~Dll~-~~~~~---~~~~~~~~m~~ 155 (172)
|++|.+|+.+ ..... ........|..
T Consensus 105 Giit~~di~~~~~~~~~~~~~~~v~~~m~~ 134 (282)
T 2yzq_A 105 GILTVGDIIRRYFAKSEKYKGVEIEPYYQR 134 (282)
T ss_dssp EEEEHHHHHHHTTTTCSGGGGCBSTTTSBS
T ss_pred EEEEHHHHHHHHHhccCCcccCcHHHHhCC
Confidence 9999999987 54321 13445556644
No 82
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=98.63 E-value=8.3e-09 Score=83.81 Aligned_cols=88 Identities=20% Similarity=0.262 Sum_probs=68.5
Q ss_pred cccchhhhhccCceeeecCceeccCCCCC-----------CCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCc
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAAPS-----------SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGF 119 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~l 119 (172)
++.++++ +...+.++...+...-.... ....+++++|++ +++++.+++++.+++++|.+++++++
T Consensus 52 ~~~~V~d--~~l~GivT~~Di~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~l 127 (296)
T 3ddj_A 52 GRIIVAN--EKIEGLLTTRDLLSTVESYCKDSCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEFTAINIMVTRNFGSL 127 (296)
T ss_dssp CEEEEES--SSEEEEEEHHHHHGGGTTCC---CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHHHHHHHHHHHTCSEE
T ss_pred ceEEEEC--CeEEEEEeHHHHHHHhcccccccccchhhHHHhcccHHHhccC--CCEEEcCCCCHHHHHHHHHHcCCCEE
Confidence 4556666 55566665555554432111 124689999999 99999999999999999999999999
Q ss_pred ceecCCccEEEEeeccceeeeec
Q 030753 120 PVIDDDWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 120 PVvd~~~~lvGIVt~~Dll~~~~ 142 (172)
||+|++|+++|++|.+|+++...
T Consensus 128 pVvd~~~~lvGivt~~dl~~~~~ 150 (296)
T 3ddj_A 128 PVVDINDKPVGIVTEREFLLLYK 150 (296)
T ss_dssp EEECTTSCEEEEEEHHHHGGGGG
T ss_pred EEEcCCCcEEEEEeHHHHHHhhh
Confidence 99998899999999999986543
No 83
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.63 E-value=4.6e-09 Score=78.08 Aligned_cols=59 Identities=22% Similarity=0.370 Sum_probs=53.2
Q ss_pred CCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeee
Q 030753 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
....+++++|.+ +.++.+++++.+++++|.++++..+||+|++|+++|+||..|+++..
T Consensus 93 ~~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l 151 (157)
T 1o50_A 93 LIAKNASEIMLD---PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLAL 151 (157)
T ss_dssp CSSCBHHHHCBC---CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred HcCCcHHHHcCC---CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHH
Confidence 356789999976 78899999999999999999999999999789999999999998643
No 84
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.62 E-value=6.3e-09 Score=74.77 Aligned_cols=56 Identities=27% Similarity=0.439 Sum_probs=51.4
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeecccee
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll 138 (172)
...+++++|.+ ++.++.+++++.+++++|.+++++.+||+|++|+++|+|+.+|++
T Consensus 6 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~ 61 (133)
T 1y5h_A 6 TMTTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIV 61 (133)
T ss_dssp --CCHHHHSEE--TCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHH
T ss_pred hhcCHHHHhcC--CceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHH
Confidence 34589999998 899999999999999999999999999998789999999999998
No 85
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.61 E-value=9.9e-09 Score=83.89 Aligned_cols=84 Identities=23% Similarity=0.309 Sum_probs=66.2
Q ss_pred ccchhhhhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEE
Q 030753 52 SSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131 (172)
Q Consensus 52 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGI 131 (172)
.+++++..++..|.+....++.. ....+++++|.+ ++.++.+++++.+++++|.++++..+||+|++|+++|+
T Consensus 173 ~~~Vvd~~~~lvGivt~~dll~~-----~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGi 245 (278)
T 2yvy_A 173 YIYVVDEKGRLKGVLSLRDLIVA-----DPRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGI 245 (278)
T ss_dssp EEEEECTTCBEEEEEEHHHHHHS-----CTTCBSTTTSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEE
T ss_pred EEEEECCCCCEEEEEEHHHHhcC-----CCCCcHHHHhCC--CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEE
Confidence 34566655555555544443322 246689999998 89999999999999999999999999999988999999
Q ss_pred eeccceeeeec
Q 030753 132 VSDYDLLALDS 142 (172)
Q Consensus 132 Vt~~Dll~~~~ 142 (172)
||..|++....
T Consensus 246 vT~~Dil~~i~ 256 (278)
T 2yvy_A 246 VTVDDVLDVLE 256 (278)
T ss_dssp EEHHHHHHHC-
T ss_pred EEHHHHHHHHH
Confidence 99999986543
No 86
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.60 E-value=1.1e-08 Score=75.82 Aligned_cols=59 Identities=20% Similarity=0.411 Sum_probs=54.2
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecC--CccEEEEeeccceeeee
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD--DWKLVGLVSDYDLLALD 141 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~--~~~lvGIVt~~Dll~~~ 141 (172)
...+|+++|++ ++.++.+++++.+++++|.+++++.+||+|+ +|+++|+||.+|+.+..
T Consensus 11 ~~~~v~dim~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~ 71 (164)
T 2pfi_A 11 HHVRVEHFMNH--SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQAL 71 (164)
T ss_dssp CSCBHHHHCBC--CCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHH
T ss_pred cCCCHHHHcCC--CCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHH
Confidence 56799999999 9999999999999999999999999999996 68999999999998543
No 87
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=98.59 E-value=2.3e-08 Score=79.87 Aligned_cols=72 Identities=21% Similarity=0.362 Sum_probs=59.3
Q ss_pred eeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeecccC--CCCCCCCCCc
Q 030753 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG--SGRADNSMFP 155 (172)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~~--~~~~~~~m~~ 155 (172)
..+++++|++ ++.++.+++++.++++.|.+++++++||+|++|+++|++|.+|+++...... .......|.+
T Consensus 83 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~ 156 (280)
T 3kh5_A 83 NEPVREIMEE--NVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDENEVIDDYITR 156 (280)
T ss_dssp TSBGGGTSBC--SCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBC
T ss_pred hhhHHHhcCC--CCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCC
Confidence 4589999999 9999999999999999999999999999998899999999999986543222 2244445543
No 88
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=98.56 E-value=5.3e-09 Score=85.99 Aligned_cols=93 Identities=15% Similarity=0.184 Sum_probs=72.3
Q ss_pred ecccchhhhhccCceeeecCceeccCCCC--CCCeeEecceeeccc----eeeeecccccHHHHHHHHHHhhhcCcceec
Q 030753 50 ATSSDRVSALRRSSAVFASGTLTANSAAP--SSGVYTVGDFMTTKE----ELHVVKPTTTVDEALEILVEKRITGFPVID 123 (172)
Q Consensus 50 ~r~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~V~diM~~~~----~~~~v~~~~sl~eal~~m~~~~i~~lPVvd 123 (172)
.+++|+++..+...|.++...+...-... .....+++++|+++. ++.++.+++++.+++++|.++++.++||+|
T Consensus 221 ~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 300 (323)
T 3t4n_C 221 VSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD 300 (323)
T ss_dssp CSEEEEECTTCBEEEEEETTHHHHHHHTTHHHHTTSBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEEC
T ss_pred CCEEEEECCCCeEEEEEeHHHHHHHHhhchhhhccCCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEEC
Confidence 34677787777777777666664432211 113458999998743 578999999999999999999999999999
Q ss_pred CCccEEEEeeccceeeeec
Q 030753 124 DDWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 124 ~~~~lvGIVt~~Dll~~~~ 142 (172)
++|+++|+||..|+++...
T Consensus 301 ~~~~l~Giit~~Dil~~l~ 319 (323)
T 3t4n_C 301 DVGRLVGVLTLSDILKYIL 319 (323)
T ss_dssp TTSBEEEEEEHHHHHHHHH
T ss_pred CCCcEEEEEEHHHHHHHHH
Confidence 8899999999999987543
No 89
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.56 E-value=7.9e-09 Score=79.05 Aligned_cols=86 Identities=14% Similarity=0.066 Sum_probs=64.8
Q ss_pred cccchhhhh-ccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 51 TSSDRVSAL-RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 51 r~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
..+|+++.. +...|.+....+....... ...+++ |.+ ++.++.+++++.+++++|.++++..+||+|++|+++
T Consensus 70 ~~~pVvd~~~~~lvGivt~~Dl~~~~~~~--~~~~v~--~~~--~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lv 143 (173)
T 3ocm_A 70 SFFPVCRGSLDEVVGIGRAKDLVADLITE--GRVRRN--RLR--DPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIE 143 (173)
T ss_dssp SEEEEESSSTTSEEEEEEHHHHHHHHHHH--SSCCGG--GSB--CCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEE
T ss_pred CEEEEEeCCCCCEEEEEEHHHHHHHHhcC--CcchhH--hcC--CCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEE
Confidence 456777654 5556666555544332111 245677 446 788999999999999999999999999999889999
Q ss_pred EEeeccceeeeec
Q 030753 130 GLVSDYDLLALDS 142 (172)
Q Consensus 130 GIVt~~Dll~~~~ 142 (172)
||||..|++....
T Consensus 144 GiIT~~Dil~~l~ 156 (173)
T 3ocm_A 144 GLVTPIDVFEAIA 156 (173)
T ss_dssp EEECHHHHHHHHH
T ss_pred EEEeHHHHHHHHh
Confidence 9999999997554
No 90
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.55 E-value=2.2e-08 Score=74.36 Aligned_cols=59 Identities=27% Similarity=0.416 Sum_probs=54.5
Q ss_pred CCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcC-cceecCCccEEEEeeccceeee
Q 030753 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG-FPVIDDDWKLVGLVSDYDLLAL 140 (172)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~-lPVvd~~~~lvGIVt~~Dll~~ 140 (172)
.....+|+++|++ ++.++.+++++.+++++|.+++++. +||+|++ +++|+||.+|+++.
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~ 71 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKV 71 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHH
T ss_pred hhccccHhhcccC--CCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHH
Confidence 3467899999999 9999999999999999999999999 9999977 99999999999864
No 91
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=98.55 E-value=1.7e-08 Score=80.64 Aligned_cols=58 Identities=21% Similarity=0.465 Sum_probs=53.9
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeee
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~ 140 (172)
...+++++|++ ++.++.+++++.+++++|.++++.++||+|++|+++|+||.+|+++.
T Consensus 221 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~ 278 (280)
T 3kh5_A 221 TNVRMEEIMKR--DVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKY 278 (280)
T ss_dssp HHCBHHHHSBS--SCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGG
T ss_pred hCCcHHHHhcC--CCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHh
Confidence 35689999998 99999999999999999999999999999988899999999999864
No 92
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.54 E-value=5.2e-09 Score=77.53 Aligned_cols=90 Identities=16% Similarity=0.086 Sum_probs=67.3
Q ss_pred ecccchhhh--hccCceeeecCceeccCCCC-----CCCeeEecceeeccce------eeeecccccHHHHHHHHHHhhh
Q 030753 50 ATSSDRVSA--LRRSSAVFASGTLTANSAAP-----SSGVYTVGDFMTTKEE------LHVVKPTTTVDEALEILVEKRI 116 (172)
Q Consensus 50 ~r~~~~~~~--~~~~~~~~~~g~~~~~~~~~-----~~~~~~V~diM~~~~~------~~~v~~~~sl~eal~~m~~~~i 116 (172)
.+++|+++. .+...|.++...+....... .....++.++|.+ + +.++.+++++.+++++|.++++
T Consensus 44 ~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~~~~~~~v~~~~~l~~~~~~m~~~~~ 121 (164)
T 2pfi_A 44 VTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILAR--GCPTEPVTLTLFSETTLHQAQNLFKLLNL 121 (164)
T ss_dssp CSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHHHHT--TCCCBCCCCCEETTCBHHHHHHHHHHTTC
T ss_pred CCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhhhcc--cccccCCceEECCCCcHHHHHHHHHHhCC
Confidence 346677764 45566666555554322111 1134578999987 6 7889999999999999999999
Q ss_pred cCcceecCCccEEEEeeccceeeeec
Q 030753 117 TGFPVIDDDWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 117 ~~lPVvd~~~~lvGIVt~~Dll~~~~ 142 (172)
+.+||+| +|+++|+||..|+++...
T Consensus 122 ~~lpVvd-~g~l~Giit~~dil~~~~ 146 (164)
T 2pfi_A 122 QSLFVTS-RGRAVGCVSWVEMKKAIS 146 (164)
T ss_dssp SEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred CEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 9999999 799999999999986543
No 93
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.54 E-value=2.4e-08 Score=72.19 Aligned_cols=59 Identities=25% Similarity=0.479 Sum_probs=52.6
Q ss_pred CeeEecc---eeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeee
Q 030753 81 GVYTVGD---FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 81 ~~~~V~d---iM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
...++++ +|.+ ++.++.+++++.+++++|.+++++.+||+|++|+++|+|+.+|+.+..
T Consensus 6 ~~~~v~~~~~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 67 (144)
T 2nyc_A 6 LKIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLI 67 (144)
T ss_dssp GGSBGGGSSCCBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred hhcchhhcCCCCCC--CceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHh
Confidence 3446777 8887 899999999999999999999999999999889999999999998643
No 94
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.53 E-value=5.8e-08 Score=79.31 Aligned_cols=83 Identities=28% Similarity=0.289 Sum_probs=64.6
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHh-----hhcCcceecCCccEEEEeeccceeeeecccCCCCCCCCCCc
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK-----RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 155 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~-----~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~~~~~~~~~m~~ 155 (172)
...+++++|++ +++++.+++++.++++.|.++ +++.+||+|++|+++|+||.+|++.. .....+...|.+
T Consensus 133 ~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~---~~~~~v~~im~~ 207 (278)
T 2yvy_A 133 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA---DPRTRVAEIMNP 207 (278)
T ss_dssp CTTBGGGTCBS--CCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS---CTTCBSTTTSBS
T ss_pred CcchHHhhcCC--CceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC---CCCCcHHHHhCC
Confidence 45689999999 999999999999999999987 78999999988999999999999853 234455556643
Q ss_pred Cc------cchhhhhhhhc
Q 030753 156 EV------DSTWKVYIQRG 168 (172)
Q Consensus 156 ~~------~~l~~~l~~i~ 168 (172)
.+ .++.+.++.++
T Consensus 208 ~~~~v~~~~~l~~a~~~m~ 226 (278)
T 2yvy_A 208 KVVYVRTDTDQEEVARLMA 226 (278)
T ss_dssp SCCCEETTSBHHHHHHHHH
T ss_pred CCeEEeCCCCHHHHHHHHH
Confidence 32 44455555443
No 95
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=98.53 E-value=1.7e-08 Score=81.98 Aligned_cols=89 Identities=20% Similarity=0.318 Sum_probs=71.3
Q ss_pred ecccchhhhhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 50 ATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 50 ~r~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
.+++|+++..+...+.++...+.... .......+++++|++ ++.++.+++++.++++.|.+++++.+||+|++|+++
T Consensus 124 ~~~lpVvd~~~~lvGivt~~dl~~~~-~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~ 200 (296)
T 3ddj_A 124 FGSLPVVDINDKPVGIVTEREFLLLY-KDLDEIFPVKVFMST--KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVV 200 (296)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHGGGG-GGSCCCCBHHHHSBC--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEE
T ss_pred CCEEEEEcCCCcEEEEEeHHHHHHhh-hcccccccHHHhhcC--CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEE
Confidence 35667777666666766665554322 123345699999998 899999999999999999999999999999889999
Q ss_pred EEeeccceeeee
Q 030753 130 GLVSDYDLLALD 141 (172)
Q Consensus 130 GIVt~~Dll~~~ 141 (172)
|+||.+|+++..
T Consensus 201 Givt~~dl~~~~ 212 (296)
T 3ddj_A 201 GIVTVVNAIKQL 212 (296)
T ss_dssp EEEEHHHHHHHH
T ss_pred EEEEHHHHHHHH
Confidence 999999998654
No 96
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.51 E-value=1.4e-08 Score=75.13 Aligned_cols=58 Identities=24% Similarity=0.358 Sum_probs=51.2
Q ss_pred eEecceeecc----ceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeee
Q 030753 83 YTVGDFMTTK----EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 83 ~~V~diM~~~----~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
.+|+|+|+++ .++.++.+++++.+++++|.+++++.+||++ +|+++|+|+.+|+++..
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~ 68 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKV 68 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHS
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHH
Confidence 4799999963 2568999999999999999999999999965 79999999999998654
No 97
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.49 E-value=4.4e-08 Score=80.81 Aligned_cols=90 Identities=17% Similarity=0.146 Sum_probs=70.3
Q ss_pred cccchhhhhccCceeeecCceeccCCCC--CCCeeEecceee------ccceeeeecccccHHHHHHHHHHhhhcCccee
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAAP--SSGVYTVGDFMT------TKEELHVVKPTTTVDEALEILVEKRITGFPVI 122 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~V~diM~------~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVv 122 (172)
+.+++++..+...|.++...+....... .....+++++|. + ++.++.+++++.+++++|.++++..+||+
T Consensus 225 ~~~~Vvd~~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vv 302 (330)
T 2v8q_E 225 SALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFE--GVLKCYLHETLEAIINRLVEAEVHRLVVV 302 (330)
T ss_dssp SEEEEECTTSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGGCCSCCC--SCCEECTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred CeEEEECCCCcEEEEEEHHHHHHHHhccccccccCcHHHHHhccccccC--CCeEECCCCcHHHHHHHHHHCCCcEEEEE
Confidence 4567777666667777666665433321 112568889884 5 88999999999999999999999999999
Q ss_pred cCCccEEEEeeccceeeeec
Q 030753 123 DDDWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 123 d~~~~lvGIVt~~Dll~~~~ 142 (172)
|++|+++|+||..|+++...
T Consensus 303 d~~g~l~Giit~~Dil~~~~ 322 (330)
T 2v8q_E 303 DEHDVVKGIVSLSDILQALV 322 (330)
T ss_dssp CTTSBEEEEEEHHHHHHHHH
T ss_pred cCCCcEEEEEeHHHHHHHHH
Confidence 98899999999999987544
No 98
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.48 E-value=3.2e-08 Score=73.10 Aligned_cols=57 Identities=30% Similarity=0.612 Sum_probs=51.3
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeee
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
..++|+++ + ++.++.+++++.+++++|.+++++.+||+|++|+++|+|+.+|+.+..
T Consensus 21 ~~~~v~~~--~--~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~ 77 (152)
T 2uv4_A 21 EELQIGTY--A--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLA 77 (152)
T ss_dssp HHHTCSBC--S--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred HHccCCcc--C--CceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHh
Confidence 55678887 5 789999999999999999999999999999889999999999998654
No 99
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.46 E-value=2.9e-08 Score=88.06 Aligned_cols=90 Identities=23% Similarity=0.272 Sum_probs=0.9
Q ss_pred ecccchhhhhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 50 ATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 50 ~r~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
+..+|+++ .+...+.+....+.. ......+|+++|+++++++++.+++++.+++++|.++++..+||+|++|+++
T Consensus 119 ~s~~pVvd-~g~lvGIVt~rDl~~----~~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lv 193 (490)
T 4avf_A 119 FSGFPVVE-QGELVGIVTGRDLRV----KPNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLR 193 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEE-CCEEEEEEEhHHhhh----ccccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEE
Confidence 45677777 555555554444421 2335679999999544589999999999999999999999999999889999
Q ss_pred EEeeccceeeeeccc
Q 030753 130 GLVSDYDLLALDSIS 144 (172)
Q Consensus 130 GIVt~~Dll~~~~~~ 144 (172)
|+||.+|+++....+
T Consensus 194 GiIT~~Dil~~~~~p 208 (490)
T 4avf_A 194 GLVTFRDIEKAKTYP 208 (490)
T ss_dssp -------------CT
T ss_pred EEEehHHhhhhccCc
Confidence 999999999865544
No 100
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.46 E-value=2e-08 Score=89.22 Aligned_cols=93 Identities=20% Similarity=0.188 Sum_probs=0.4
Q ss_pred eecccchhhhh---ccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC
Q 030753 49 LATSSDRVSAL---RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD 125 (172)
Q Consensus 49 ~~r~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~ 125 (172)
.++.+|+++.. +...+.+....+... ......+|+++|++.++++++.+++++.+++++|.++++..+||+|++
T Consensus 127 ~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~---~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~ 203 (503)
T 1me8_A 127 THNTVAVTDDGTPHGVLLGLVTQRDYPID---LTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDD 203 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEECCCcCCeEEEEEEHHHHHhh---hccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCC
Confidence 45667888754 455555544444321 233567899999983339999999999999999999999999999988
Q ss_pred ccEEEEeeccceeeeeccc
Q 030753 126 WKLVGLVSDYDLLALDSIS 144 (172)
Q Consensus 126 ~~lvGIVt~~Dll~~~~~~ 144 (172)
|+++|+||.+||++.....
T Consensus 204 g~lvGiIT~~Dil~~~~~~ 222 (503)
T 1me8_A 204 QHLRYIVFRKDYDRSQVCH 222 (503)
T ss_dssp ------------------C
T ss_pred CeEEEEEEecHHHHhhhcc
Confidence 9999999999999765543
No 101
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=98.46 E-value=1.8e-08 Score=83.21 Aligned_cols=93 Identities=19% Similarity=0.257 Sum_probs=70.2
Q ss_pred cccchhhhhccCceeeecCceeccCCCC--CCCeeEecceeecc----ceeeeecccccHHHHHHHHHHhhhcCcceecC
Q 030753 51 TSSDRVSALRRSSAVFASGTLTANSAAP--SSGVYTVGDFMTTK----EELHVVKPTTTVDEALEILVEKRITGFPVIDD 124 (172)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~V~diM~~~----~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~ 124 (172)
+.+++++..+...|.++...+...-... .....++.++|.+. .++.++.+++++.+++++|.++++..+||+|+
T Consensus 217 ~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 296 (334)
T 2qrd_G 217 SAVPIVNSEGTLLNVYESVDVMHLIQDGDYSNLDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDE 296 (334)
T ss_dssp SEEEEECTTCBEEEEEETHHHHHHHTTSCGGGGGSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECT
T ss_pred cEEEEEcCCCcEEEEEEHHHHHHHhhccccccccCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 3456777666666666665554332211 12356899999831 17889999999999999999999999999998
Q ss_pred CccEEEEeeccceeeeecc
Q 030753 125 DWKLVGLVSDYDLLALDSI 143 (172)
Q Consensus 125 ~~~lvGIVt~~Dll~~~~~ 143 (172)
+|+++|+||..|+++....
T Consensus 297 ~g~l~Giit~~dil~~~~~ 315 (334)
T 2qrd_G 297 NLKLEGILSLADILNYIIY 315 (334)
T ss_dssp TCBEEEEEEHHHHHHHHHS
T ss_pred CCeEEEEEeHHHHHHHHHh
Confidence 8999999999999875543
No 102
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.46 E-value=3.5e-08 Score=89.88 Aligned_cols=61 Identities=23% Similarity=0.199 Sum_probs=55.5
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHH-HhhhcCcceecCCccEEEEeeccceeeee
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILV-EKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~-~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
.+.+|+|+|++++++.++.++++++|+.+.|. +++++.+||+|++++++|+|+.+|+.+..
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l 512 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRL 512 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTT
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHH
Confidence 66799999995449999999999999999999 79999999999889999999999998653
No 103
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.43 E-value=8.2e-08 Score=79.04 Aligned_cols=60 Identities=32% Similarity=0.347 Sum_probs=54.5
Q ss_pred CCCeeEecceeeccceeeeecccccHHHHHHHHHHh-----hhcCcceecCCccEEEEeeccceeee
Q 030753 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK-----RITGFPVIDDDWKLVGLVSDYDLLAL 140 (172)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~-----~i~~lPVvd~~~~lvGIVt~~Dll~~ 140 (172)
.+...+|+++|++ +++++.+++++.++++.|.++ +++.+||+|++|+++|+||.+|++..
T Consensus 133 ~~~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~ 197 (286)
T 2oux_A 133 HYEDETAGAIMTT--EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN 197 (286)
T ss_dssp TSCTTBHHHHCBS--CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS
T ss_pred cCChHHHHHhCCC--CceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC
Confidence 3466799999999 999999999999999999998 78889999988999999999999864
No 104
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.42 E-value=5.7e-08 Score=85.70 Aligned_cols=83 Identities=23% Similarity=0.312 Sum_probs=66.2
Q ss_pred ccchhhhhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEE
Q 030753 52 SSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131 (172)
Q Consensus 52 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGI 131 (172)
.+++++..++..|.+....+... ..+.+++++|++ ++.++.+++++++++++|.++++..+||+|++|+++|+
T Consensus 193 ~ipVvd~~~~lvGiVt~~Dll~~-----~~~~~v~dim~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGi 265 (473)
T 2zy9_A 193 YIYVVDEKGRLKGVLSLRDLIVA-----DPRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGI 265 (473)
T ss_dssp EEEEECTTSBEEEEEEHHHHHHS-----CTTSBGGGTSBS--SCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEE
T ss_pred EEEEECCCCcEEEEEEHHHHhcC-----CCCCcHHHHhCC--CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEE
Confidence 34566655555555544433322 245699999998 89999999999999999999999999999988999999
Q ss_pred eeccceeeee
Q 030753 132 VSDYDLLALD 141 (172)
Q Consensus 132 Vt~~Dll~~~ 141 (172)
||.+|+++..
T Consensus 266 IT~~Dil~~i 275 (473)
T 2zy9_A 266 VTVDDVLDVL 275 (473)
T ss_dssp EEHHHHHHHH
T ss_pred EehHhhHHHH
Confidence 9999998653
No 105
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=98.42 E-value=9.5e-08 Score=78.78 Aligned_cols=60 Identities=27% Similarity=0.311 Sum_probs=54.6
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC-ccEEEEeeccceeee
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLAL 140 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~-~~lvGIVt~~Dll~~ 140 (172)
...+|+|+|+++.+++++++++++.++++.|.+++++++||+|++ ++++|+|+.+|++..
T Consensus 20 ~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~ 80 (334)
T 2qrd_G 20 RSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNV 80 (334)
T ss_dssp HHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHH
T ss_pred hcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHH
Confidence 347899999987678999999999999999999999999999976 899999999999864
No 106
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.42 E-value=2.2e-08 Score=89.02 Aligned_cols=91 Identities=21% Similarity=0.256 Sum_probs=59.6
Q ss_pred ecccchhhhhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 50 ATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 50 ~r~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
+..+|+++..+...+.+....+.. ......+++++|+++++++++.+++++.+++++|.++++..+||+|++|+++
T Consensus 120 ~s~~PVvd~~~~lvGiVt~rDL~~----~~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~ 195 (496)
T 4fxs_A 120 FAGFPVVTENNELVGIITGRDVRF----VTDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLK 195 (496)
T ss_dssp CCEEEEECSSSBEEEEEEHHHHTT----CCCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCC
T ss_pred CcEEEEEccCCEEEEEEEHHHHhh----cccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEE
Confidence 456777776555555554444421 2335678999999544589999999999999999999999999999999999
Q ss_pred EEeeccceeeeeccc
Q 030753 130 GLVSDYDLLALDSIS 144 (172)
Q Consensus 130 GIVt~~Dll~~~~~~ 144 (172)
|+||.+|+++.....
T Consensus 196 GiIT~~DIl~~~~~p 210 (496)
T 4fxs_A 196 GMITAKDFHKAESKP 210 (496)
T ss_dssp EEECCC-----CCCT
T ss_pred EeehHhHHHHhhccc
Confidence 999999999765443
No 107
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.41 E-value=4.4e-08 Score=87.74 Aligned_cols=76 Identities=25% Similarity=0.311 Sum_probs=1.5
Q ss_pred cCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeecccC
Q 030753 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145 (172)
Q Consensus 68 ~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~~ 145 (172)
-|.+..+++.......+|+++|++ +++++.++.++++|.++|.++++..+||||++++++|+||.+|+.+...++.
T Consensus 185 vGIvT~RD~rf~d~~~~V~evMT~--~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~~p~ 260 (556)
T 4af0_A 185 LGIVTGRDVQFQDAETPIKSVMTT--EVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPY 260 (556)
T ss_dssp ---------------------------------------------------------------------------CTT
T ss_pred EEEEecccccccccceEhhhhccc--ceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhhCCc
Confidence 355555555444467899999999 9999999999999999999999999999999999999999999998766554
No 108
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.35 E-value=2.3e-07 Score=81.86 Aligned_cols=85 Identities=26% Similarity=0.250 Sum_probs=65.4
Q ss_pred CCCeeEecceeeccceeeeecccccHHHHHHHHHHh-----hhcCcceecCCccEEEEeeccceeeeecccCCCCCCCCC
Q 030753 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK-----RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153 (172)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~-----~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~~~~~~~~~m 153 (172)
.+...+++++|++ +++++.++++++++++.|.++ +++.+||+|++++++|+|+.+|++.. ..+....+.|
T Consensus 151 ~~~~~~v~~iM~~--~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~---~~~~~v~dim 225 (473)
T 2zy9_A 151 RYEEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA---DPRTRVAEIM 225 (473)
T ss_dssp TSCTTBSTTTCBS--CEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS---CTTSBGGGTS
T ss_pred cCCCCCHHHhCCC--CceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC---CCCCcHHHHh
Confidence 3456789999999 999999999999999999987 57899999988999999999999853 2334455555
Q ss_pred CcC------ccchhhhhhhhc
Q 030753 154 FPE------VDSTWKVYIQRG 168 (172)
Q Consensus 154 ~~~------~~~l~~~l~~i~ 168 (172)
.++ -.++.+.++.++
T Consensus 226 ~~~~~~v~~~~~l~ea~~~m~ 246 (473)
T 2zy9_A 226 NPKVVYVRTDTDQEEVARLMA 246 (473)
T ss_dssp BSSCCCEESSSBHHHHHHHHH
T ss_pred CCCCeEEeCCCcHHHHHHHHH
Confidence 432 244555555544
No 109
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.34 E-value=1.8e-07 Score=77.12 Aligned_cols=60 Identities=22% Similarity=0.330 Sum_probs=54.0
Q ss_pred CeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC-ccEEEEeeccceeee
Q 030753 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLAL 140 (172)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~-~~lvGIVt~~Dll~~ 140 (172)
...+|+|+|+++.+++++.+++++.++++.|.+++++++||+|++ ++++|+|+.+|++..
T Consensus 33 ~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~ 93 (330)
T 2v8q_E 33 KSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINI 93 (330)
T ss_dssp HHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHH
T ss_pred HcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHH
Confidence 456999999555599999999999999999999999999999977 789999999998854
No 110
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.31 E-value=1.1e-07 Score=84.87 Aligned_cols=89 Identities=22% Similarity=0.285 Sum_probs=69.1
Q ss_pred ecccchhhh--hccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCcc
Q 030753 50 ATSSDRVSA--LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK 127 (172)
Q Consensus 50 ~r~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~ 127 (172)
+..+|+++. .+...+.+....+.. ......+++++|++ ++++++.+++++.+++++|.++++..+||+|++|+
T Consensus 144 ~s~~pVvd~g~~~~lvGiVt~rDl~~----~~~~~~~V~~vM~~-~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~ 218 (511)
T 3usb_A 144 ISGVPVVNNLDERKLVGIITNRDMRF----IQDYSIKISDVMTK-EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGV 218 (511)
T ss_dssp CSEEEEESCTTTCBEEEEEEHHHHTT----CCCSSSBHHHHCCC-CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSB
T ss_pred CcEEEEEecCCCCEEEEEEEehHhhh----hccCCCcHHHhccc-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCC
Confidence 345666665 444445544444422 23356789999996 47889999999999999999999999999999999
Q ss_pred EEEEeeccceeeeecc
Q 030753 128 LVGLVSDYDLLALDSI 143 (172)
Q Consensus 128 lvGIVt~~Dll~~~~~ 143 (172)
++|+||.+|+++....
T Consensus 219 l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 219 LQGLITIKDIEKVIEF 234 (511)
T ss_dssp EEEEEEHHHHHHHHHC
T ss_pred EeeeccHHHHHHhhhc
Confidence 9999999999976554
No 111
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.31 E-value=5.5e-08 Score=85.84 Aligned_cols=90 Identities=26% Similarity=0.370 Sum_probs=4.6
Q ss_pred ecccchhhhhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 50 ATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 50 ~r~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
...+|+++..+...+.++...+... .....+++++|++.+++.++.+++++.+++++|.++++..+||+|++|+++
T Consensus 126 ~~~~pVvd~~~~lvGivt~~Dl~~~----~~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lv 201 (494)
T 1vrd_A 126 IGGLPVVDEEGRLVGLLTNRDVRFE----KNLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLV 201 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEcCCCEEEEEEEHHHHHhh----cCCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEE
Confidence 3467778766666666655555431 124578999999655789999999999999999999999999999889999
Q ss_pred EEeeccceeeeecc
Q 030753 130 GLVSDYDLLALDSI 143 (172)
Q Consensus 130 GIVt~~Dll~~~~~ 143 (172)
|+||..|+++....
T Consensus 202 GiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 202 GLITIKDIMSVIEH 215 (494)
T ss_dssp -------CHHHHTC
T ss_pred EEEEHHHHHhhhcc
Confidence 99999999976543
No 112
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=98.30 E-value=2.6e-07 Score=75.83 Aligned_cols=59 Identities=25% Similarity=0.485 Sum_probs=54.0
Q ss_pred CeeEecce---eeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeee
Q 030753 81 GVYTVGDF---MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (172)
Q Consensus 81 ~~~~V~di---M~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~ 141 (172)
...+++++ |++ ++.++.+++++.+++++|.+++++.+||+|++|+++|+||.+|+++..
T Consensus 185 ~~~~v~~~~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~ 246 (323)
T 3t4n_C 185 LKIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLI 246 (323)
T ss_dssp CCSBGGGTTCSBCT--TCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHH
T ss_pred hhCcHHHcCCCCCC--CcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHH
Confidence 44589999 888 899999999999999999999999999999889999999999998654
No 113
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.23 E-value=1.8e-07 Score=83.10 Aligned_cols=94 Identities=20% Similarity=0.196 Sum_probs=53.9
Q ss_pred eecccchhhh---hccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC
Q 030753 49 LATSSDRVSA---LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD 125 (172)
Q Consensus 49 ~~r~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~ 125 (172)
.++.+|+++. .++..+.+....+... .......+++++|++.+++.++.+++++.+++++|.++++..+||+|++
T Consensus 138 ~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~--~~~~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~ 215 (514)
T 1jcn_A 138 GFSGIPITETGTMGSKLVGIVTSRDIDFL--AEKDHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDC 215 (514)
T ss_dssp ---CEESCC--------CCEECTTTTC------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSS
T ss_pred CCCEEEEEeCCCcCCEEEEEEEHHHHHhh--hhccCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCC
Confidence 3567788876 3555555544433221 1113567899999865578999999999999999999999999999988
Q ss_pred ccEEEEeeccceeeeeccc
Q 030753 126 WKLVGLVSDYDLLALDSIS 144 (172)
Q Consensus 126 ~~lvGIVt~~Dll~~~~~~ 144 (172)
|+++|+||.+|+++.....
T Consensus 216 g~lvGiIt~~Dll~~~~~~ 234 (514)
T 1jcn_A 216 DELVAIIARTDLKKNRDYP 234 (514)
T ss_dssp SCCC----CCCCSSCCCCT
T ss_pred CeEEEEEEHHHHHHHhhCc
Confidence 9999999999999765543
No 114
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.21 E-value=4.3e-07 Score=74.01 Aligned_cols=53 Identities=15% Similarity=0.045 Sum_probs=48.9
Q ss_pred ceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeec
Q 030753 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (172)
Q Consensus 87 diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~ 142 (172)
.+|.+ .++++.+++++.++..+|...|+.++||++ +|+++||||++||+++..
T Consensus 193 ~~md~--sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 193 CRIDQ--SPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp SCEEC--CSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ccccC--CCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 47999 999999999999999999999999999998 699999999999987543
No 115
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.21 E-value=4.2e-07 Score=80.78 Aligned_cols=67 Identities=21% Similarity=0.347 Sum_probs=54.3
Q ss_pred EecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeecccCCCCCCCCCC
Q 030753 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 154 (172)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~~~~~~~~~m~ 154 (172)
+++++|+. +++++.+++++.+++++|.+++++.+||+|++++++|+||.+|+... ........+.|.
T Consensus 90 ~~~~~m~~--d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~--~~~~~~v~diM~ 156 (496)
T 4fxs_A 90 IFEAGVVT--HPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV--TDLTKSVAAVMT 156 (496)
T ss_dssp HCCC--CB--CCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC--CCTTSBGGGTSE
T ss_pred cccccccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc--ccCCCcHHHHhc
Confidence 55778998 99999999999999999999999999999988999999999999732 122444555555
No 116
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.18 E-value=1.6e-07 Score=83.48 Aligned_cols=90 Identities=9% Similarity=0.055 Sum_probs=70.6
Q ss_pred ecccchhh-hhccCceeeecCceeccCCC-CCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCC--
Q 030753 50 ATSSDRVS-ALRRSSAVFASGTLTANSAA-PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-- 125 (172)
Q Consensus 50 ~r~~~~~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~-- 125 (172)
.+++|+++ ..+...+.++...++..... ......+|+++|++ +++++.+++++.+++++|.++++ +||+|++
T Consensus 416 ~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im~~--~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~ 491 (527)
T 3pc3_A 416 VDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKALNK--RVIRLNESEILGKLARVLEVDPS--VLILGKNPA 491 (527)
T ss_dssp CSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGEET--TCCEEETTSBHHHHHHHHTTCSE--EEEEEECSS
T ss_pred CCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHhcC--CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcc
Confidence 35678887 56677777777766543221 23356789999999 99999999999999999988776 6999974
Q ss_pred --ccEEEEeeccceeeeecc
Q 030753 126 --WKLVGLVSDYDLLALDSI 143 (172)
Q Consensus 126 --~~lvGIVt~~Dll~~~~~ 143 (172)
|+++||||..||++....
T Consensus 492 ~~g~lvGIVT~~Dll~~l~~ 511 (527)
T 3pc3_A 492 GKVELKALATKLDVTTFIAA 511 (527)
T ss_dssp SCEEEEEEEEHHHHHHHHHT
T ss_pred cCCeEEEEEEHHHHHHHHHh
Confidence 899999999999976544
No 117
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.09 E-value=8.2e-07 Score=79.16 Aligned_cols=53 Identities=25% Similarity=0.471 Sum_probs=48.3
Q ss_pred ecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecC--CccEEEEeeccceee
Q 030753 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD--DWKLVGLVSDYDLLA 139 (172)
Q Consensus 85 V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~--~~~lvGIVt~~Dll~ 139 (172)
.+++|.+ +++++.+++++.+++++|.+++++.+||+|+ +++++|+||.+|+..
T Consensus 115 ~~~~m~~--d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~ 169 (511)
T 3usb_A 115 SESGVIS--DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF 169 (511)
T ss_dssp SSSCSSS--SCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT
T ss_pred ccccccc--CCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh
Confidence 4566777 8999999999999999999999999999998 789999999999974
No 118
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.09 E-value=4.3e-07 Score=80.23 Aligned_cols=84 Identities=32% Similarity=0.447 Sum_probs=0.5
Q ss_pred ecccchhhhhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 50 ATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 50 ~r~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
+..+|+++. +...+.+ ..+++.. ....+++++|++ ++.++.+++++.+++++|.++++..+||+|++|+++
T Consensus 124 ~~~~pVvd~-~~lvGiv-----t~~Dl~~-~~~~~v~~im~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lv 194 (486)
T 2cu0_A 124 IDGLPVVED-EKVVGII-----TKKDIAA-REGKLVKELMTK--EVITVPESIEVEEALKIMIENRIDRLPVVDERGKLV 194 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcEEEEEEC-CEEEEEE-----EHHHhcc-CCCCCHHHHccC--CCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEE
Confidence 345666654 3333333 3333322 256789999998 899999999999999999999999999999889999
Q ss_pred EEeeccceeeeec
Q 030753 130 GLVSDYDLLALDS 142 (172)
Q Consensus 130 GIVt~~Dll~~~~ 142 (172)
|+||.+|+++...
T Consensus 195 GiiT~~Dil~~~~ 207 (486)
T 2cu0_A 195 GLITMSDLVARKK 207 (486)
T ss_dssp ------------C
T ss_pred EEEEHHHHHHhhh
Confidence 9999999997654
No 119
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.07 E-value=4.1e-07 Score=80.23 Aligned_cols=68 Identities=29% Similarity=0.483 Sum_probs=1.1
Q ss_pred EecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeecccCCCCCCCCCCc
Q 030753 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 155 (172)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~~~~~~~~~m~~ 155 (172)
+++++|++ +++++.+++++.+++++|.+++++.+||+|++++++|+||.+|+.... .....+.++|.+
T Consensus 96 ~~~~iM~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~--~~~~~v~~im~~ 163 (494)
T 1vrd_A 96 KTENGIIY--DPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK--NLSKKIKDLMTP 163 (494)
T ss_dssp TC----------------------------------------------------------------------
T ss_pred hHhhcCcc--CCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc--CCCCcHHHHhCC
Confidence 46889998 999999999999999999999999999999889999999999998531 223455555654
No 120
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.02 E-value=3.2e-06 Score=74.35 Aligned_cols=68 Identities=22% Similarity=0.408 Sum_probs=57.6
Q ss_pred EecceeeccceeeeecccccHHHHHHHHHHhhhcCcceec--CCccEEEEeeccceeeeecccCCCCCCCCCCc
Q 030753 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID--DDWKLVGLVSDYDLLALDSISGSGRADNSMFP 155 (172)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd--~~~~lvGIVt~~Dll~~~~~~~~~~~~~~m~~ 155 (172)
.++++|++ ++.++.+++++.+++++|.+++++.+||+| ++++++|+||.+|++... .......++|.+
T Consensus 91 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~--~~~~~v~~im~~ 160 (491)
T 1zfj_A 91 RSENGVII--DPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS--DYNAPISEHMTS 160 (491)
T ss_dssp HHTTTTSS--SCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS--CSSSBTTTSCCC
T ss_pred hHHhcCcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc--cCCCcHHHHcCC
Confidence 45889999 999999999999999999999999999999 789999999999998542 234556666664
No 121
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.02 E-value=7e-07 Score=79.30 Aligned_cols=69 Identities=23% Similarity=0.204 Sum_probs=2.3
Q ss_pred Eecce-eeccceeeeecccccHHHHHHHHHHhhhcCcceecCC---ccEEEEeeccceeeeecccCCCCCCCCCCc
Q 030753 84 TVGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD---WKLVGLVSDYDLLALDSISGSGRADNSMFP 155 (172)
Q Consensus 84 ~V~di-M~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~---~~lvGIVt~~Dll~~~~~~~~~~~~~~m~~ 155 (172)
+..++ |++ +++++.+++++.+++++|.+++++.+||+|++ ++++|+||.+|++.. .......+.+.|.+
T Consensus 97 ~~~e~gM~~--~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-~~~~~~~V~diM~~ 169 (503)
T 1me8_A 97 KNFKAGFVV--SDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-LTQTETKVSDMMTP 169 (503)
T ss_dssp HTTTC-----------------------------------------------------------------------
T ss_pred hhcccCccc--CCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-hccccCcHHHHhCC
Confidence 33455 998 99999999999999999999999999999976 899999999999853 22224455566654
No 122
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.99 E-value=7.3e-07 Score=79.13 Aligned_cols=70 Identities=26% Similarity=0.378 Sum_probs=29.2
Q ss_pred EecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecC---CccEEEEeeccceeeeecccCCCCCCCCCCc
Q 030753 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD---DWKLVGLVSDYDLLALDSISGSGRADNSMFP 155 (172)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~---~~~lvGIVt~~Dll~~~~~~~~~~~~~~m~~ 155 (172)
+++++|.+ +++++.+++++.+++++|.+++++.+||+|+ +++++|+||.+|+.............+.|.+
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~ 181 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTP 181 (514)
T ss_dssp TCCTTSCS--SCCCCCC-----------------CEESCC--------CCEECTTTTC----------------C
T ss_pred hhhhcccc--CCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCC
Confidence 56789998 8999999999999999999999999999997 4899999999999864211223445555554
No 123
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.95 E-value=2.3e-06 Score=75.26 Aligned_cols=86 Identities=23% Similarity=0.294 Sum_probs=64.7
Q ss_pred ccchhh--hhccCceeeecCceeccCCCCCCCeeEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEE
Q 030753 52 SSDRVS--ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (172)
Q Consensus 52 ~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lv 129 (172)
.+|+++ ..+...+.+....+... .....+++++|++. ++.++.+++++.+++++|.++++..+||+|++|+++
T Consensus 123 ~~pVvd~~~~~~lvGivt~~Dl~~~----~~~~~~v~~im~~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lv 197 (491)
T 1zfj_A 123 GVPIVETLANRKLVGIITNRDMRFI----SDYNAPISEHMTSE-HLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLS 197 (491)
T ss_dssp EEEEESCTTTCBEEEEEEHHHHHHC----SCSSSBTTTSCCCS-CCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEE
T ss_pred EEEEEEeCCCCEEEEEEEHHHHhhh----ccCCCcHHHHcCCC-CCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEE
Confidence 445555 34444444444443321 12456899999852 578899999999999999999999999999889999
Q ss_pred EEeeccceeeeec
Q 030753 130 GLVSDYDLLALDS 142 (172)
Q Consensus 130 GIVt~~Dll~~~~ 142 (172)
|++|..|+++...
T Consensus 198 Givt~~Dil~~~~ 210 (491)
T 1zfj_A 198 GLITIKDIEKVIE 210 (491)
T ss_dssp EEEEHHHHHHHHH
T ss_pred EEEEHHHHHHHHh
Confidence 9999999987554
No 124
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.89 E-value=1.7e-06 Score=76.65 Aligned_cols=67 Identities=25% Similarity=0.361 Sum_probs=3.4
Q ss_pred eEecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceeeeecccCCCCCCCCCC
Q 030753 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 154 (172)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~~~~~~~~~~~~~~m~ 154 (172)
.+++++|.. +++++.+++++.+++++|.+++++.+||+| +++++||||.+|+.... .....+.++|.
T Consensus 88 k~~~~~m~~--~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~--~~~~~V~~vMt 154 (490)
T 4avf_A 88 KKHETAIVR--DPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKP--NAGDTVAAIMT 154 (490)
T ss_dssp HHCCC-------------------------------------------------------------------
T ss_pred cccccCccc--CceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhcc--ccCCcHHHHhc
Confidence 357889998 999999999999999999999999999999 89999999999996322 22445555665
No 125
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.89 E-value=1.7e-06 Score=77.48 Aligned_cols=66 Identities=27% Similarity=0.381 Sum_probs=0.4
Q ss_pred ceeeccceeeeecccccHHHHHHHHHHhhhcCcceecC---CccEEEEeeccceeeeecccCCCCCCCCCCcCc
Q 030753 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD---DWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157 (172)
Q Consensus 87 diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~---~~~lvGIVt~~Dll~~~~~~~~~~~~~~m~~~~ 157 (172)
..|.. +|+++.|+.++.+++++|.+++++.+||+|+ +++++||||.+|+.-. ....++.++|++++
T Consensus 142 ~g~i~--dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~---d~~~~V~evMT~~l 210 (556)
T 4af0_A 142 NGFIT--DPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ---DAETPIKSVMTTEV 210 (556)
T ss_dssp C-------------------------------------------------------------------------
T ss_pred cCccC--CCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc---ccceEhhhhcccce
Confidence 45666 8999999999999999999999999999986 4799999999998642 33567777787654
No 126
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.59 E-value=9.4e-06 Score=71.60 Aligned_cols=52 Identities=31% Similarity=0.571 Sum_probs=1.1
Q ss_pred ecceeeccceeeeecccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccceee
Q 030753 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139 (172)
Q Consensus 85 V~diM~~~~~~~~v~~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~ 139 (172)
++++|+. +++++.+++++.+++++|.+++++.+||+|+ ++++|+|+.+|++.
T Consensus 95 ~~~~m~~--~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~ 146 (486)
T 2cu0_A 95 AERLIVE--DVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA 146 (486)
T ss_dssp CC-----------------------------------------------------
T ss_pred hhhcccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc
Confidence 4678988 9999999999999999999999999999997 99999999999975
No 127
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=58.82 E-value=17 Score=23.18 Aligned_cols=37 Identities=16% Similarity=0.029 Sum_probs=30.7
Q ss_pred ccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccc
Q 030753 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136 (172)
Q Consensus 100 ~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~D 136 (172)
.-++++||+..|...+...+.-.|.+..-+.+|+++.
T Consensus 11 kpMsveEAv~qmel~gh~F~vF~n~etg~~nVVYRR~ 47 (65)
T 3ka5_A 11 KPMSEEEAVLEMELLGHNFFVFQNGDSNEVNVVYKRK 47 (65)
T ss_dssp SCBCHHHHHHHHHHHTCSEEEEEETTTTEEEEEEECT
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEeCCCCCEEEEEEeC
Confidence 4489999999999999999988887755668887764
No 128
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=47.86 E-value=13 Score=27.49 Aligned_cols=36 Identities=17% Similarity=0.397 Sum_probs=28.6
Q ss_pred cHHHHHHHHHHhhhcCcceecCCccEEEEeeccceee
Q 030753 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139 (172)
Q Consensus 103 sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~Dll~ 139 (172)
.+.+.++.+.+.|...+.|-. +++++|+|...|-++
T Consensus 120 ~~~~~~~~la~~G~T~v~VA~-d~~l~GvIalaD~iK 155 (156)
T 1svj_A 120 DVDQKVDQVARQGATPLVVVE-GSRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE-TTEEEEEEEEEECCC
T ss_pred HHHHHHHHHHhCCCCEEEEEE-CCEEEEEEEEecCCC
Confidence 367777788888887776765 689999999999764
No 129
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=45.01 E-value=23 Score=21.89 Aligned_cols=37 Identities=11% Similarity=-0.015 Sum_probs=29.4
Q ss_pred ccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccc
Q 030753 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136 (172)
Q Consensus 100 ~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~D 136 (172)
.-++++||+..|...+...+.-.|.+..-+.+|+++.
T Consensus 11 kpmsveEAv~qmel~gh~F~vF~n~~t~~~nVvYrR~ 47 (57)
T 3k2t_A 11 KPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRK 47 (57)
T ss_dssp CCBCHHHHHHHHHHHTCSEEEEEBSSSCCEEEEEECT
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCCCCEEEEEEeC
Confidence 4489999999999999999988887644557776653
No 130
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=36.39 E-value=16 Score=25.32 Aligned_cols=20 Identities=30% Similarity=0.356 Sum_probs=15.8
Q ss_pred cceecCCccEEEEeecccee
Q 030753 119 FPVIDDDWKLVGLVSDYDLL 138 (172)
Q Consensus 119 lPVvd~~~~lvGIVt~~Dll 138 (172)
.||.+++|+++|+|...-.+
T Consensus 106 ~PV~~~~g~viGvv~vg~~l 125 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSVGYTI 125 (131)
T ss_dssp EEEECTTCCEEEEEEEEEEG
T ss_pred EeEECCCCCEEEEEEEEEEh
Confidence 59988779999999876443
No 131
>3lyv_A Ribosome-associated factor Y; ribosomal protein S30AE family, structural genomics, PSI-2, structure initiative; 2.70A {Streptococcus pyogenes}
Probab=36.30 E-value=28 Score=22.21 Aligned_cols=37 Identities=14% Similarity=-0.011 Sum_probs=29.8
Q ss_pred ccccHHHHHHHHHHhhhcCcceecCCccEEEEeeccc
Q 030753 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136 (172)
Q Consensus 100 ~~~sl~eal~~m~~~~i~~lPVvd~~~~lvGIVt~~D 136 (172)
.-++++||+..|...+...+.-.|.+..-+.+|+++.
T Consensus 12 kpMsveEAv~qMel~gh~F~vF~n~etg~~nVVYRR~ 48 (66)
T 3lyv_A 12 KPMDVEEARLQMELLGHDFFIYTDSEDGATNILYRRE 48 (66)
T ss_dssp CEECHHHHHHHHHTTTCSEEEEEETTTCSEEEEEECT
T ss_pred CCCCHHHHHHHHHcCCCcEEEEEeCCCCCEEEEEEEC
Confidence 3489999999999999999988887644567777754
No 132
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=35.81 E-value=17 Score=25.74 Aligned_cols=20 Identities=30% Similarity=0.395 Sum_probs=15.9
Q ss_pred cceecCCccEEEEeecccee
Q 030753 119 FPVIDDDWKLVGLVSDYDLL 138 (172)
Q Consensus 119 lPVvd~~~~lvGIVt~~Dll 138 (172)
.||.|++|+++|+|+..-.+
T Consensus 111 ~PV~~~~g~viGvv~vg~~~ 130 (142)
T 3by8_A 111 TPIYDENHKQIGVVAIGLEL 130 (142)
T ss_dssp EEEECTTSCEEEEEEEEEEH
T ss_pred EeEEcCCCCEEEEEEEeEEH
Confidence 59987679999999876543
No 133
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=32.66 E-value=20 Score=27.66 Aligned_cols=22 Identities=18% Similarity=0.247 Sum_probs=18.4
Q ss_pred hhhcCcceecCCccEEEEeecc
Q 030753 114 KRITGFPVIDDDWKLVGLVSDY 135 (172)
Q Consensus 114 ~~i~~lPVvd~~~~lvGIVt~~ 135 (172)
.|-+.=|++|.+|+++||++..
T Consensus 186 ~G~SGGPLv~~~G~vVGI~s~~ 207 (231)
T 3tjo_A 186 YGNAGGPLVNLDGEVIGINTLK 207 (231)
T ss_dssp TTTTTSEEECTTSCEEEEEEEE
T ss_pred CCCchhHeecCCCeEEEEEeEE
Confidence 3667789999889999999864
No 134
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=32.13 E-value=20 Score=27.53 Aligned_cols=23 Identities=13% Similarity=0.148 Sum_probs=19.0
Q ss_pred HhhhcCcceecCCccEEEEeecc
Q 030753 113 EKRITGFPVIDDDWKLVGLVSDY 135 (172)
Q Consensus 113 ~~~i~~lPVvd~~~~lvGIVt~~ 135 (172)
..|-+.=|++|.+|+++||++..
T Consensus 172 ~~G~SGGPlv~~~G~vvGI~s~~ 194 (237)
T 3lgi_A 172 NHGNSGGALVNSLGELMGINTLS 194 (237)
T ss_dssp CTTCTTCEEECTTCCEEEEECCC
T ss_pred CCCCchHHeeCCCCeEEEEEeee
Confidence 35667789999889999999873
No 135
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=29.61 E-value=24 Score=26.40 Aligned_cols=22 Identities=23% Similarity=0.427 Sum_probs=18.5
Q ss_pred hhhcCcceecCCccEEEEeecc
Q 030753 114 KRITGFPVIDDDWKLVGLVSDY 135 (172)
Q Consensus 114 ~~i~~lPVvd~~~~lvGIVt~~ 135 (172)
.|-+.=|+++.+|+++||++..
T Consensus 155 ~GdSGGPlv~~~g~lvGI~s~g 176 (210)
T 2as9_A 155 PGNSGSPVLNSNNEVIGVVYGG 176 (210)
T ss_dssp TTCTTCEEECTTSCEEEEECCS
T ss_pred CCCccCcEECCCCeEEEEEecc
Confidence 4677789998779999999975
No 136
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=27.49 E-value=28 Score=27.24 Aligned_cols=22 Identities=14% Similarity=0.291 Sum_probs=18.7
Q ss_pred hhhcCcceecCCccEEEEeecc
Q 030753 114 KRITGFPVIDDDWKLVGLVSDY 135 (172)
Q Consensus 114 ~~i~~lPVvd~~~~lvGIVt~~ 135 (172)
.|-+.=|++|.+|+++||++..
T Consensus 184 ~G~SGGPLvn~~G~vVGI~s~~ 205 (245)
T 3sti_A 184 RGNSGGALLNLNGELIGINTAI 205 (245)
T ss_dssp TTTTTSEEECTTSCEEEEEECC
T ss_pred CCcchhHeecCCCeEEEEEEeE
Confidence 5777889999889999998863
No 137
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=27.44 E-value=28 Score=25.60 Aligned_cols=22 Identities=23% Similarity=0.462 Sum_probs=18.5
Q ss_pred hhhcCcceecCCccEEEEeecc
Q 030753 114 KRITGFPVIDDDWKLVGLVSDY 135 (172)
Q Consensus 114 ~~i~~lPVvd~~~~lvGIVt~~ 135 (172)
.|-+.=|+++.+|+++||++..
T Consensus 151 ~GdSGGPl~~~~g~lvGI~s~g 172 (200)
T 2w7s_A 151 PGNSGSPVLNSKHELIGILYAG 172 (200)
T ss_dssp TTCTTCEEECTTSCEEEEEEEE
T ss_pred CCCccCeEECcCCEEEEEEecc
Confidence 4667789998779999999975
No 138
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=27.31 E-value=28 Score=26.58 Aligned_cols=22 Identities=27% Similarity=0.363 Sum_probs=18.5
Q ss_pred hhhcCcceecCCccEEEEeecc
Q 030753 114 KRITGFPVIDDDWKLVGLVSDY 135 (172)
Q Consensus 114 ~~i~~lPVvd~~~~lvGIVt~~ 135 (172)
.|-+.=|++|.+|+++||++..
T Consensus 180 ~GdSGGPLv~~~G~vvGI~s~~ 201 (237)
T 3k6y_A 180 QGDSGGPLIDLNGQVLGVVFGA 201 (237)
T ss_dssp TTCTTCEEECTTSCEEEEEEEE
T ss_pred CCccHHHEECCCCEEEEEEEee
Confidence 5777889998789999999764
No 139
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=26.70 E-value=24 Score=25.14 Aligned_cols=23 Identities=22% Similarity=0.206 Sum_probs=16.1
Q ss_pred hcCcceecCCccEEEEee-cccee
Q 030753 116 ITGFPVIDDDWKLVGLVS-DYDLL 138 (172)
Q Consensus 116 i~~lPVvd~~~~lvGIVt-~~Dll 138 (172)
++..||.|++|+++|+|. ..|+.
T Consensus 108 v~~~Pi~d~~G~~~G~vev~~Dit 131 (151)
T 2qkp_A 108 VTYAAVRDQAGDFQGVLEYVQDIK 131 (151)
T ss_dssp EEEEEEECTTCCEEEEEEEEEECG
T ss_pred EEEEEEECCCCCEEEEEEEEEECH
Confidence 345788887799999884 44443
No 140
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=26.48 E-value=31 Score=27.09 Aligned_cols=27 Identities=26% Similarity=0.308 Sum_probs=19.5
Q ss_pred HhhhcCcceecCCccEEEEeeccceee
Q 030753 113 EKRITGFPVIDDDWKLVGLVSDYDLLA 139 (172)
Q Consensus 113 ~~~i~~lPVvd~~~~lvGIVt~~Dll~ 139 (172)
+-|-+.=||+|.+|+++||-+..|=..
T Consensus 123 ~pGdSGsPVvn~dG~VIGVHt~s~~~g 149 (213)
T 3fan_A 123 ACGDSGSPVITEAGELVGVHTGSNKQG 149 (213)
T ss_dssp CCCSTTCEEEETTSCEEEEEEC-----
T ss_pred CCCCCCCccCCCCCcEEEEEeccCCcc
Confidence 357788899999999999999887553
No 141
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=25.72 E-value=19 Score=23.81 Aligned_cols=25 Identities=20% Similarity=0.333 Sum_probs=20.0
Q ss_pred cceecCCccEEEEeeccceeeeecc
Q 030753 119 FPVIDDDWKLVGLVSDYDLLALDSI 143 (172)
Q Consensus 119 lPVvd~~~~lvGIVt~~Dll~~~~~ 143 (172)
+=++|++|..+|+++..+.++....
T Consensus 16 Vrli~~~Ge~lGv~~~~eAl~~A~e 40 (78)
T 1tif_A 16 VRLIDQNGDQLGIKSKQEALEIAAR 40 (78)
T ss_dssp EEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred EEEECCCCcCCCcccHHHHHHHHHH
Confidence 5578889999999999998865433
No 142
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=21.22 E-value=48 Score=24.31 Aligned_cols=23 Identities=17% Similarity=0.401 Sum_probs=19.4
Q ss_pred HHhhhcCcceecCCccEEEEeec
Q 030753 112 VEKRITGFPVIDDDWKLVGLVSD 134 (172)
Q Consensus 112 ~~~~i~~lPVvd~~~~lvGIVt~ 134 (172)
...|-+.=|++|.+|+++||.+.
T Consensus 122 i~pGnSGGPl~n~~G~VVGI~~~ 144 (163)
T 2w5e_A 122 TQDGMSGAPVCDKYCRVLAVHQT 144 (163)
T ss_dssp CSSCCTTCEEECTTSCEEEEEEE
T ss_pred eCCCCchhhEEcCCCEEEEEEcc
Confidence 45677889999988999999874
No 143
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=20.37 E-value=44 Score=25.88 Aligned_cols=23 Identities=13% Similarity=0.294 Sum_probs=18.9
Q ss_pred HhhhcCcceecCCccEEEEeecc
Q 030753 113 EKRITGFPVIDDDWKLVGLVSDY 135 (172)
Q Consensus 113 ~~~i~~lPVvd~~~~lvGIVt~~ 135 (172)
..|-+.=|++|.+|+++||++..
T Consensus 179 ~~G~SGGPLv~~~G~vvGI~s~~ 201 (239)
T 1l1j_A 179 NPGNSGGPLLNIHGEVIGINTAI 201 (239)
T ss_dssp CTTTTTSEEECSSSEEEEEECCC
T ss_pred CCCCccHHhccCCCeEEEEEeee
Confidence 35667789998789999999974
Done!