BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030757
(172 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZV51|ATL56_ARATH RING-H2 finger protein ATL56 OS=Arabidopsis thaliana GN=ATL56 PE=2
SV=1
Length = 181
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 91/131 (69%), Gaps = 4/131 (3%)
Query: 27 KPNPKILPILLKVIIMTLITSMFFLLLGLVAFLLLPILFTSLNRHHDRHRGAC---HSDG 83
KP +IL + L +IM I +F +L+G+ + L+LP+L +SL+RHH R R SDG
Sbjct: 24 KPKTRILSLFLVGVIMFSIFFLFLVLIGIASVLILPLLLSSLHRHHRRRRRNRRQESSDG 83
Query: 84 LSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWL 143
LS + +K L QFK S+ + + +ES+CVVC +GF+QGQWCR L GCGHVFHRKC+DTWL
Sbjct: 84 LSSRFVKKLPQFKFSEPS-TYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWL 142
Query: 144 LKVAACPTCRT 154
LK + CP CR
Sbjct: 143 LKASTCPICRA 153
>sp|Q9M0C3|ATL14_ARATH RING-H2 finger protein ATL14 OS=Arabidopsis thaliana GN=ATL14 PE=2
SV=1
Length = 176
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 85/152 (55%), Gaps = 12/152 (7%)
Query: 12 DVDVHRRHDSPPLPPKPNPKILP------ILLKVIIMTLITSMFFLLLGLVAFLLLPILF 65
D + R P PPK N K LP L+ +I++ + + F +L + F +
Sbjct: 8 DGSISREPSPSPPPPKANTKNLPTKILSNFLIGLIMIPVAITAFIFILTSLGFTFFFAFY 67
Query: 66 TSLNRHHDRHRGAC----HSDGLSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQG 121
L R++ +SDGLSP+ +K L QFK + + G +CVVC++GF+QG
Sbjct: 68 WFLQRNYRHRLRRHRRHEYSDGLSPRCVKRLPQFKYCEPSSEYGG--DDCVVCIDGFRQG 125
Query: 122 QWCRKLVGCGHVFHRKCLDTWLLKVAACPTCR 153
QWCRKL CGHVFHRKC+D WL+KV+ CP CR
Sbjct: 126 QWCRKLPRCGHVFHRKCVDLWLIKVSTCPICR 157
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 25 PPKPNPKILPILLKVIIMTLITSMFFLLLGLVAFLLLPILFTSLNRHHDRHRGACHSDGL 84
PP+P+ +++ +++ I S L VA L + L R + GL
Sbjct: 14 PPQPSEEMIAAESDMVV---ILSALLCALICVAGLAAVVRCAWLRRFTAGGDSPSPNKGL 70
Query: 85 SPKELKSL--SQFKISKRNE---SQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCL 139
K L+SL S F ++ ++ G +EC +CL F G+ R L CGH FH +C+
Sbjct: 71 KKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECI 130
Query: 140 DTWLLKVAACPTCR---TPTTFDR 160
D WL+ ++CP+CR TP DR
Sbjct: 131 DKWLVSRSSCPSCRRILTPVRCDR 154
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 23/153 (15%)
Query: 16 HRRHDSPPLPPKPNPKILPILLKVIIMTLIT--------------SMFFLLLGLVAFLLL 61
HRR +S PNP + K+++ + + + F L AF L
Sbjct: 8 HRRFNSDHHSFWPNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRRRREAFRGL 67
Query: 62 PILFTSLNRHHDRHRGACHSDGLSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQG 121
P++F RH GL+P + SL F + + +EC VCL K+
Sbjct: 68 PVIF--------RHPFEMPKRGLNPTVIASLPTFTVGA-TDGVAASATECAVCLSVLKEQ 118
Query: 122 QWCRKLVGCGHVFHRKCLDTWLLKVAACPTCRT 154
R+L C H+FH C+DTWL + CP CRT
Sbjct: 119 DKARELPNCKHIFHVDCVDTWLTTCSTCPVCRT 151
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 33 LPILLKVIIMTLITSMFFLLLGLVAFLLLPIL-------FTSLNRHHDRHRGACHS---- 81
PIL +I L T+ FLL+ F++ L F R D++ +S
Sbjct: 41 FPILAIAVIGILATA--FLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPHEV 98
Query: 82 -DGLSPKELKSLSQFKISKRN-----ESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFH 135
GL ++++ FK KR+ E Q EC VCL F++ + R + C HVFH
Sbjct: 99 NRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFH 158
Query: 136 RKCLDTWLLKVAACPTCRTPTT 157
C+D WL A CP CRT +
Sbjct: 159 IDCIDIWLQGNANCPLCRTSVS 180
>sp|Q8L9W3|ATL23_ARATH E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis thaliana GN=ATL23
PE=1 SV=2
Length = 163
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Query: 43 TLITSMFFLLL------GLVAFLLLPILFTSLNRHHDRHRGA-----CHSDGLSPKELKS 91
T+I ++F LL +V + L +L+ S R +R R A GLS EL+
Sbjct: 27 TMIATVFMALLLPCVGMCIVFLIYLFLLWCSTRRRIERLRFAEPVKPVTGKGLSVLELEK 86
Query: 92 LSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPT 151
+ K++ R + +EC VCLE + GQ R + GC H FH+ C DTWL CP
Sbjct: 87 IP--KLTGRELAVIARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPV 144
Query: 152 CRT 154
CR
Sbjct: 145 CRA 147
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 39 VIIMTLITSMFFLLLGLVAFLLLPIL--FTSLNRHHDRHRG--ACHSDGLSPKELKSLSQ 94
V+I+ ++ ++GL+A L S NR H A + GL K L+SL +
Sbjct: 29 VLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPK 88
Query: 95 FKISKRNESQPGFE-SECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCR 153
S +S P + EC +CL F G R L CGH FH C+DTWL ++CP+CR
Sbjct: 89 LTYSP--DSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCR 146
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 83 GLSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTW 142
GL + ++SL ++ +K + + +CV+CL F++G+ + + CGHVFH C+DTW
Sbjct: 115 GLDSQAVRSLPVYRYTKAAKQR---NEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTW 171
Query: 143 LLKVAACPTCRTPTTF 158
L CP CR+ F
Sbjct: 172 LSSYVTCPLCRSNQLF 187
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 83 GLSPKELKSLSQFKISKRNESQPGF-ESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDT 141
GL + +KS F ++ +PG E ECVVCL FK + R + C HVFH C+D
Sbjct: 56 GLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDI 115
Query: 142 WLLKVAACPTCRT 154
WL + CP CR
Sbjct: 116 WLSHSSTCPICRA 128
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Query: 39 VIIMTLITSMFFLLLGLVAFLLLPIL--FTSLNRHHDRHRG-------ACHSDGLSPKEL 89
V+I+ + +LGL+A L + NR + A + GL K L
Sbjct: 31 VVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSPQPPVAAANKGLKKKVL 90
Query: 90 KSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAAC 149
+SL + S + F +EC +CL F G R L CGH FH C+DTWL ++C
Sbjct: 91 QSLPKLTFSPESPESEKF-AECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSC 149
Query: 150 PTCRTPTTFDR 160
P+CR R
Sbjct: 150 PSCRQILVVAR 160
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 23 PLPPKPNPKILPILLKVIIMTLITSMFFLLLGLVAFLLLPILFTS--------LNRHHDR 74
P PP P K + ++ ++FFL GL++ + ++ NR +D
Sbjct: 33 PSPPDLQTGHTPS--KTTVFAVLVTLFFLT-GLLSVYIRHCARSNPDSSTRYFRNRAND- 88
Query: 75 HRGACHSDGLSPKELKSLSQFKISKRNESQPGFES-ECVVCLEGFKQGQWCRKLVGCGHV 133
G+ GL ++S F S ES+ G + EC +CL + + R L C H+
Sbjct: 89 --GSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHL 146
Query: 134 FHRKCLDTWLLKVAACPTCRTPTT 157
FH C+DTWL A CP CR+ T
Sbjct: 147 FHIDCIDTWLYSHATCPVCRSNLT 170
>sp|Q9FGJ6|ATL79_ARATH RING-H2 finger protein ATL79 OS=Arabidopsis thaliana GN=ATL79 PE=2
SV=1
Length = 166
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 35 ILLKVIIMTLITSMFFLLLGLVAFLLLPILFTSLNRHHDRHRGACHSDGLSPKELKSLSQ 94
+LL ++I LI ++ L + L P L T + H A S +P + S S
Sbjct: 42 VLLILVISALICALS--LYAAIRCFLRPTLETE-DDHKPDPEAAASSTPTTPTLVYS-SD 97
Query: 95 FKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCRT 154
+++ G E+EC +CL F+QG+ + L C H FH KC+ WL ++CPTCRT
Sbjct: 98 LELA-------GAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRT 150
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 63/155 (40%), Gaps = 30/155 (19%)
Query: 33 LPILLKVIIMTLITSMFFLLLGLVAFLL-----------LPILFTSLNRHHDR-----HR 76
PIL +I L T+ FLL+ F++ L S R +D+ +
Sbjct: 34 FPILAVAVIGILATA--FLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLMVYS 91
Query: 77 GACHSDGLSPKELKSLSQFKISKRNESQPGF------------ESECVVCLEGFKQGQWC 124
S GL ++++ FK KR + G EC VCL F+ +
Sbjct: 92 PELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKL 151
Query: 125 RKLVGCGHVFHRKCLDTWLLKVAACPTCRTPTTFD 159
R + C H+FH C+D WL A CP CRT + D
Sbjct: 152 RIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCD 186
>sp|Q9P7E1|YOF7_SCHPO Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBP4H10.07 PE=1 SV=1
Length = 583
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 106 GFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVA-ACPTCRT 154
G + C+VCL F+ CR+L C H FHR+C+D WL +CP CRT
Sbjct: 520 GTDERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCRT 569
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 109 SECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCR 153
+EC++CL F +G+ R L C H FH KC+DTWLL ++CPTCR
Sbjct: 111 TECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCR 155
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 81 SDGLSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLD 140
S GL P +KSL F S P EC VCL F++ + R L C H FH C+D
Sbjct: 92 SRGLDPNVIKSLPVFTFSDETHKDP---IECAVCLSEFEESETGRVLPNCQHTFHVDCID 148
Query: 141 TWLLKVAACPTCRT 154
W + CP CR+
Sbjct: 149 MWFHSHSTCPLCRS 162
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 84 LSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWL 143
L P L+ + F S + P EC VCL F++ R L CGHVFH C+DTW
Sbjct: 88 LDPTVLEKIPIFVYSVKTHESPL--EECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWF 145
Query: 144 LKVAACPTCRTPT 156
++CP CR P
Sbjct: 146 RSRSSCPLCRAPV 158
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 109 SECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCR 153
+EC++CL F+ G+ R L C H FH +C+DTWLL ++CPTCR
Sbjct: 112 TECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCR 156
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 75 HRGACHSDGLSPKELKSLSQFKISKRNESQPGF--ESECVVCLEGFKQGQWCRKLVGCGH 132
R + + DGL+ +KS++ +K +S GF S+C VCL F++ + R L C H
Sbjct: 108 QRISTNGDGLNESMIKSITVYKY----KSGDGFVDGSDCSVCLSEFEENESLRLLPKCNH 163
Query: 133 VFHRKCLDTWLLKVAACPTCRTPTTFDRFLRNSFYSIWEN 172
FH C+DTWL + CP CR F + N S+ +N
Sbjct: 164 AFHLPCIDTWLKSHSNCPLCR---AFVTGVNNPTASVGQN 200
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 24 LPPK--PNPKILPILLKVIIMTLITSMFFLLLGLVAFLLLPILFTSLNRHHDRHRGACHS 81
+PPK ++ + + I++ +I+S + L+ + + I +T+ + R G
Sbjct: 185 MPPKNFSRGSLVFVSISFIVLMIISSAW-----LIFYFIQKIRYTNARDRNQRRLGDAAK 239
Query: 82 DGLSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDT 141
+S +++ + E+ P F+ C VC+E +KQ R L C HVFH+ C+D
Sbjct: 240 KAISKLTTRTVKK----GDKETDPDFD-HCAVCIESYKQNDVVRVL-PCKHVFHKSCVDP 293
Query: 142 WLLKVAACPTCR 153
WL + CP C+
Sbjct: 294 WLSEHCTCPMCK 305
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Query: 24 LPPK--PNPKILPILLKVIIMTLITSMFFLLLGLVAFLLLPILFTSLNRHHDRHRGACHS 81
+PPK ++ + + I++ +I+S + L+ + + I +T+ + R G
Sbjct: 185 MPPKNFSRGSLVFVSISFIVLMIISSAW-----LIFYFIQKIRYTNARDRNQRRLGDAAK 239
Query: 82 DGLSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDT 141
+S +++ + E+ P F+ C VC+E +KQ R ++ C HVFH+ C+D
Sbjct: 240 KAISKLTTRTVKK----GDKETDPDFD-HCAVCIESYKQNDVVR-ILPCKHVFHKSCVDP 293
Query: 142 WLLKVAACPTCR 153
WL + CP C+
Sbjct: 294 WLSEHCTCPMCK 305
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 19 HDSPPLPPKPNPKI--------LPILLKVIIMTLITSMFFLLLGLVAFLLLPILFTSL-- 68
HD P P P+P + + ++L V++ L+ S LGL + + + ++L
Sbjct: 35 HDQSPTP-APSPYVGDNNFDANVVMVLSVLLCALVCS-----LGLNSIIRCALRCSNLVP 88
Query: 69 -NRHHDRHRGACHSDGLSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKL 127
D + + G+ K LKS S + PG ++EC +CL F + + L
Sbjct: 89 SEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTE-LNLPGLDTECAICLSEFVAEERVKLL 147
Query: 128 VGCGHVFHRKCLDTWLLKVAACPTCR 153
C H FH +C+D WL ++CPTCR
Sbjct: 148 PTCHHGFHVRCIDKWLSSHSSCPTCR 173
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 24 LPPK--PNPKILPILLKVIIMTLITSMFFLLLGLVAFLLLPILFTSLNRHHDRHRGACHS 81
+PPK ++ + + I++ +I+S + L+ + + I +T+ + R G
Sbjct: 185 MPPKNFSRGSLVFVSISFIVLMIISSAW-----LIFYFIQKIRYTNARDRNQRRLGDAAK 239
Query: 82 DGLSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDT 141
+S +++ + E+ P F+ C VC+E +KQ R L C HVFH+ C+D
Sbjct: 240 KAISKLTTRTVKK----GDKETDPDFD-HCAVCIESYKQNDVVRVL-PCKHVFHKSCVDP 293
Query: 142 WLLKVAACPTCR 153
WL + CP C+
Sbjct: 294 WLSEHCTCPMCK 305
>sp|Q9LS99|ATL77_ARATH RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2
SV=1
Length = 220
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 76 RGACHSDGLSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFH 135
R + + G+ K LK L S + PG ECV+CL F G+ R L C H FH
Sbjct: 96 RDSSVNKGIKKKALKMLPVVNYSPEI-NLPGVGEECVICLSDFVAGEQLRVLPKCNHGFH 154
Query: 136 RKCLDTWLLKVAACPTCR 153
+C+D WL + CP CR
Sbjct: 155 LRCIDKWLTQHMTCPKCR 172
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 105 PGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCRT 154
PG + ECV+CL F G+ R L C H FH +C+D WL + CP CR
Sbjct: 129 PGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRN 178
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 81 SDGLSPKELKSLSQFKISKRNE-SQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCL 139
S GL+ + + + KI+ +N G + C VCL+ F+ G+ R L C H+FH C+
Sbjct: 160 SKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCI 219
Query: 140 DTWLLKVAACPTCR 153
D WL + +CP CR
Sbjct: 220 DNWLFRHGSCPMCR 233
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 83 GLSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTW 142
GL + SL F + +N+ +EC VCL ++ R L C HVFH C+DTW
Sbjct: 75 GLDSLVIASLPTFVVGIKNDVAG---TECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTW 131
Query: 143 LLKVAACPTCRT 154
L + CP CRT
Sbjct: 132 LTTQSTCPVCRT 143
>sp|Q9LUZ9|ATL63_ARATH RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2
SV=1
Length = 308
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 111 CVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCRTP 155
CV+CL ++ G + RKL CGH FH +C+D WL + CP CR+P
Sbjct: 138 CVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSP 182
>sp|Q95SP2|HRD1_DROME E3 ubiquitin-protein ligase HRD1 OS=Drosophila melanogaster GN=sip3
PE=1 SV=1
Length = 626
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 36 LLKVIIMTLITSMFFLLLGLVAFLLLPILFTSLNRHHDRHRGACHSDGLSPKELKSLSQF 95
L+KV++ L + + L F+ P+ FT N R A + +S + +++++
Sbjct: 219 LIKVVLYILFVVIMAKIYALPMFVFRPMFFTIRN-----FRKALNDVIMSRRAIRNMNTL 273
Query: 96 KISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTC--- 152
E ++ C++C E K + CGH+FH CL +W + CPTC
Sbjct: 274 YPDATPEELRQSDNICIICREDMVNHS---KKLPCGHIFHTTCLRSWFQRQQTCPTCRLN 330
Query: 153 --RTPT 156
RTPT
Sbjct: 331 ILRTPT 336
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 81 SDGLSPKELKSLSQFKISKRNESQPGFESE-CVVCLEGFKQGQWCRKLVGCGHVFHRKCL 139
S GL+ ++ + + I+ N + ++ C VCL+ F+ G+ R L C H+FH C+
Sbjct: 165 SKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCI 224
Query: 140 DTWLLKVAACPTCR 153
D WLL+ +CP CR
Sbjct: 225 DNWLLRHGSCPMCR 238
>sp|Q6NML0|ATL76_ARATH E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76
PE=1 SV=1
Length = 225
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 81 SDGLSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLD 140
+ G+ K L+ S R + PG ECV+CL F G+ R L C H FH +C+D
Sbjct: 106 NKGIKKKALRMFPVVSYS-REMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCID 164
Query: 141 TWLLKVAACPTCR 153
WL CP CR
Sbjct: 165 KWLQHHLTCPKCR 177
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 40 IIMTLITSMFFLLLGLVAFLLLPILFTSLNRHHDRHRGACHSDGLSPKELKSLSQFKISK 99
+ + IT M L L+ + + L+T C + + K++SQ ++ +
Sbjct: 199 VAIAFITMMIISLAWLIFYYIQRFLYTGAQ---------CGNQSNRKETKKAISQLQLHR 249
Query: 100 RNESQPGFE---SECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCR 153
+ + G + C VC+E +K R ++ C H+FHR C+D WL++ CP C+
Sbjct: 250 VKKGEKGIDIDAENCAVCIENYKTKDLVR-ILPCKHIFHRLCIDPWLIEHRTCPMCK 305
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 109 SECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCRTP 155
+EC VCL F++ + R L C H FH C+DTWLL CP CR P
Sbjct: 133 TECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAP 179
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 48 MFFLLLGLVAFLLL-PILFTSLNRHHDRHRGACHSDGLSPKELKSLSQFKISKRNES--- 103
FF+++ LV +LL I + +R A + L E + + +R S
Sbjct: 221 AFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQA--LEKMETRKFNSKSKGRREGSCGA 278
Query: 104 ----QPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCR 153
G S+C +CLE + G+ R ++ C H FHRKC+D WLL+ CP CR
Sbjct: 279 LDTLSSGSTSDCAICLEKYIDGEELR-VIPCTHRFHRKCVDPWLLQHHTCPHCR 331
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 40 IIMTLITSMFFLLLGLVAFLLLPILFTSLNRHHDRHRGACHSDGLSPKELKSLSQFKISK 99
+ ++ I M L LV + + + + + R G +S +++++ +
Sbjct: 212 VSISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQIRTIKK----G 267
Query: 100 RNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCR 153
E++ F++ C VC+EG+K R ++ C H+FH+ C+D WLL CP C+
Sbjct: 268 DKETESDFDN-CAVCIEGYKPNDVVR-ILPCRHLFHKSCVDPWLLDHRTCPMCK 319
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 83 GLSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTW 142
GL+P +KSL F S F EC VCL FK + R + C H FH C+D W
Sbjct: 51 GLNPSIIKSLPIFTFSAVT---ALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMW 107
Query: 143 LLKVAACPTCRT 154
++CP CR+
Sbjct: 108 FHSHSSCPLCRS 119
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 72/176 (40%), Gaps = 21/176 (11%)
Query: 1 MPPPQRYQHYDDVDVHRRHDSPPLPPKPNPKILPILLKVIIMTLITSMFFLLLGLVAFLL 60
M PQ + + S PP PN L K + +IT +F ++ L LL
Sbjct: 1 MNSPQEISILFFFIIFLDYVSAQSPPPPNLYATSDLFKPS-LAIITGVFSIVFTLTFVLL 59
Query: 61 LPI------LFTSLNR-----HHDR------HRGACHSDGLSPKELKSLSQFKISKRNES 103
+ L + + HDR +R + S GL K ++SL F+ S
Sbjct: 60 VYAKCFHNDLRSETDSDGERIRHDRLWQGLFNRSSRFS-GLDKKAIESLPFFRFSALKGL 118
Query: 104 QPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCRTPTTFD 159
+ G E C VCL F+ + R L C H FH C+D WL + A CP CR +
Sbjct: 119 KQGLE--CSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIE 172
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 30/59 (50%)
Query: 96 KISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCRT 154
KI P S C +CL +K R+L C H+FH KC+DTWL CP CRT
Sbjct: 132 KILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRT 190
>sp|Q9UKV5|AMFR_HUMAN E3 ubiquitin-protein ligase AMFR OS=Homo sapiens GN=AMFR PE=1 SV=2
Length = 643
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 36 LLKVIIMTLITSMFFLLLGLVAFLLLPILFTSLNRHHDRHRGACHSDGLSPKELKSLSQF 95
L+ I M L +++ + LV F+ L LF + R RH+ G +
Sbjct: 273 LMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPE 332
Query: 96 KISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCR 153
+++ N+ +C +C + Q RKL CGH+FH CL +WL + +CPTCR
Sbjct: 333 ELAVNND-------DCAICWDSM---QAARKL-PCGHLFHNSCLRSWLEQDTSCPTCR 379
>sp|Q94BY6|ATL75_ARATH RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2
SV=1
Length = 226
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%)
Query: 105 PGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCR 153
PG ECV+CL F G+ R L C H FH +C+D WL + CP CR
Sbjct: 130 PGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCR 178
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 83 GLSPKELKSLSQFKISKRNESQPGFES-ECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDT 141
GL +ELK +F +++ + + EC +CL F G+ R L C H FH C+DT
Sbjct: 79 GLKKRELK---KFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDT 135
Query: 142 WLLKVAACPTCR 153
WL+ ++CP CR
Sbjct: 136 WLVSHSSCPNCR 147
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 40 IIMTLITSMFFLLLGLVAFLLLPILFTSLNRHHDRHRGACHSDGLSPKELKSLSQFKISK 99
+ ++ I M L LV + + + + + R G +S +++++ +
Sbjct: 211 VSISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQVRTIRK----G 266
Query: 100 RNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCR 153
E++ F++ C VC+EG+K R ++ C H+FH+ C+D WLL CP C+
Sbjct: 267 DKETESDFDN-CAVCIEGYKPNDVVR-ILPCRHLFHKSCVDPWLLDHRTCPMCK 318
>sp|P87237|YC0C_SCHPO Uncharacterized RING finger protein C4G3.12c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC4G3.12c PE=4 SV=1
Length = 821
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 111 CVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLK-VAACPTCR 153
C++CLE + G CRKL C H FH+ C+D WL +CP CR
Sbjct: 766 CLICLETYTNGDICRKLQACKHFFHQACIDQWLTTGNNSCPLCR 809
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 75 HRGACHSD---GLSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCG 131
+R SD GL ++SL F+ S S+ G + C VCL F+ + R L C
Sbjct: 86 NRSTASSDRFSGLDKTAIESLPLFRFSALKGSKQGLD--CSVCLSKFESVEILRLLPKCR 143
Query: 132 HVFHRKCLDTWLLKVAACPTCRTPTTFD 159
H FH C+D WL + A CP CR + +
Sbjct: 144 HAFHIGCIDQWLEQHATCPLCRDRVSME 171
>sp|Q9R049|AMFR_MOUSE E3 ubiquitin-protein ligase AMFR OS=Mus musculus GN=Amfr PE=1 SV=2
Length = 643
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 36 LLKVIIMTLITSMFFLLLGLVAFLLLPILFTSLNRHHDRHRGACHSDGLSPKELKSLSQF 95
L+ I M L +++ + LV F+ L LF + R RH+ G +
Sbjct: 273 LMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPE 332
Query: 96 KISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCR 153
+++ N+ +C +C + Q RKL CGH+FH CL +WL + +CPTCR
Sbjct: 333 ELAVNND-------DCAICWDSM---QAARKL-PCGHLFHNSCLRSWLEQDTSCPTCR 379
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 53/134 (39%), Gaps = 11/134 (8%)
Query: 26 PKPNPKILPILLKVIIMTLITSMFFLLLGLVAFLLLPILFTSLNRHHDRHRGACH----- 80
P + + +L V++ + F L L LL LFT+ N + H
Sbjct: 17 PSVSMPVTVVLTGVLLFVIFAGFFSLFLWQ---FLLNRLFTTWNLQRTPYGDLIHVATPP 73
Query: 81 -SDGLSPKELKSLSQFKISKRNESQPGFESECVVCLEGFKQGQWCRKLVGCGHVFHRKCL 139
+ GL P ++S F S + G +EC +CL F R + C H FH C+
Sbjct: 74 ENTGLDPFIIRSFPVFHYSSATKKNHG--TECAICLSEFSDEDTVRLITVCRHPFHSNCI 131
Query: 140 DTWLLKVAACPTCR 153
D W CP CR
Sbjct: 132 DLWFELHKTCPVCR 145
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 109 SECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCRTPTTF 158
++C VCL F G+ R L C H FH++C+DTWL + CP CR TF
Sbjct: 155 TDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITF 204
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 26/45 (57%)
Query: 109 SECVVCLEGFKQGQWCRKLVGCGHVFHRKCLDTWLLKVAACPTCR 153
S+C VCL F R L C H FH +C+DTWLL + CP CR
Sbjct: 120 SDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCR 164
>sp|O49691|ATL29_ARATH RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=3
SV=1
Length = 289
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 14/145 (9%)
Query: 23 PLPPKPNPKILPILLKVIIMTLITSMFFLLLGLVAFLLLPILFTSLNRHHDRHRGACHSD 82
PL P+P + +I+T+I +FF + + L T + H G SD
Sbjct: 8 PLAPQPPQQHYVTPPLTVILTVILLVFFFIGFFTLYFCKCFLDTMVQAWRLHHGGDTVSD 67
Query: 83 -------------GLSPKELKSLSQFKISK-RNESQPGFESECVVCLEGFKQGQWCRKLV 128
GL + + S F S ++ + + EC +CL F R L
Sbjct: 68 NPLQQPEAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLT 127
Query: 129 GCGHVFHRKCLDTWLLKVAACPTCR 153
C HVFH++C+D W CP CR
Sbjct: 128 TCYHVFHQECIDLWFESHRTCPVCR 152
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 19/133 (14%)
Query: 39 VIIMTLITSMFFLLLGLVAFLLLPILFTSLNR--HHDRHRGACHSD-------------- 82
VII+T+I + F + G A + +L +H H G +
Sbjct: 26 VIILTVILLVVFFI-GFFAIYFCKCFYHTLTEAWNHHYHNGLPENQIQAQQEPVQPPVNP 84
Query: 83 GLSPKELKSLSQFKISK-RNESQPGFESECVVCLEGFKQGQ-WCRKLVGCGHVFHRKCLD 140
GL P ++S F S ++ + + EC +CL F++ R L C HVFH++C+D
Sbjct: 85 GLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECID 144
Query: 141 TWLLKVAACPTCR 153
WL CP CR
Sbjct: 145 QWLESNKTCPVCR 157
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.142 0.477
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,063,843
Number of Sequences: 539616
Number of extensions: 2863998
Number of successful extensions: 11940
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 231
Number of HSP's that attempted gapping in prelim test: 11460
Number of HSP's gapped (non-prelim): 598
length of query: 172
length of database: 191,569,459
effective HSP length: 109
effective length of query: 63
effective length of database: 132,751,315
effective search space: 8363332845
effective search space used: 8363332845
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)