BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030761
(172 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FH13|RRAA3_ARATH Regulator of ribonuclease-like protein 3 OS=Arabidopsis thaliana
GN=At5g56260 PE=2 SV=1
Length = 166
Score = 269 bits (687), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/167 (78%), Positives = 148/167 (88%), Gaps = 5/167 (2%)
Query: 6 ATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEG 65
ATAEACDSNA L+++GDLR L P+F+IYGQ R FSGP+VTLKVFEDNVLVR LET+GEG
Sbjct: 5 ATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLETKGEG 64
Query: 66 KVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLK 125
VLVIDGGGSMRCALVGGNLGQLA NNGWSGIVVNGC+RDVDEIN C +GVRALGS+PLK
Sbjct: 65 GVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGSNPLK 124
Query: 126 SNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
S KKGHG+K+VP V+I G+ IRDGEWLYADSDGIL+SK+ELS+
Sbjct: 125 STKKGHGEKNVP-----VHIGGTLIRDGEWLYADSDGILISKTELSV 166
>sp|Q9FFE0|RRAA2_ARATH Regulator of ribonuclease-like protein 2 OS=Arabidopsis thaliana
GN=At5g16450 PE=2 SV=1
Length = 166
Score = 230 bits (587), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/168 (66%), Positives = 135/168 (80%), Gaps = 5/168 (2%)
Query: 5 VATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGE 64
V TAE CD+N L+ SG LR LQP+FQIYG+ + FSGPVVT+KVFEDN L+R+ +E +G
Sbjct: 4 VTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEEKGN 63
Query: 65 GKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPL 124
G+VLV+DGGGS RCA++GGN A NNGW+GIVVNGCIRDVDEINGC IGVRAL SHP+
Sbjct: 64 GRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPI 123
Query: 125 KSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
K++KKG G++ VPV IAG I DGEWLYAD+DGILVS+ ELS+
Sbjct: 124 KASKKGLGEQRVPVNIAGTRIC-----DGEWLYADTDGILVSQIELSV 166
>sp|Q9M8R9|RRAA1_ARATH Regulator of ribonuclease-like protein 1 OS=Arabidopsis thaliana
GN=At3g02770 PE=2 SV=1
Length = 166
Score = 226 bits (575), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 110/168 (65%), Positives = 134/168 (79%), Gaps = 5/168 (2%)
Query: 5 VATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGE 64
V TAE CD+N ++ SG LR LQPVFQIYG+ + FSGPVVT+KVFEDN L+R LE +G
Sbjct: 4 VTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEEKGN 63
Query: 65 GKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPL 124
G+VLV+DGGGS+RCA++GGN A NNGW+GI+VNGCIRDVDEINGC IGVRAL SHP+
Sbjct: 64 GRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALASHPI 123
Query: 125 KSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
K++KKG G++ V + IAG I DGEWLYAD+DGILVS+ ELS+
Sbjct: 124 KASKKGLGEQRVSLNIAGTRIC-----DGEWLYADTDGILVSQIELSV 166
>sp|Q46ZV6|RRAA_CUPPJ Putative regulator of ribonuclease activity OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=Reut_A1963
PE=3 SV=1
Length = 165
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 123/164 (75%), Gaps = 5/164 (3%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+N LA G LRV+ PVF+ +G+ ++F+GP TLK+FEDN LVRE LE+ G+G+
Sbjct: 5 TTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGR 64
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+RCALVGGNLG LA NGW GI+VNGC+RD E++ C IG+RAL +HP KS
Sbjct: 65 VLVVDGGGSLRCALVGGNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKS 124
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
K+G G++ V V + G+ +R G W+Y D+DG+LVS+ +L
Sbjct: 125 QKRGAGERDV-----AVQMPGAVVRPGNWIYVDADGVLVSEEKL 163
>sp|Q2SX33|RRAAH_BURTA Putative regulator of ribonuclease activity OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=BTH_I1992 PE=3 SV=1
Length = 165
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 120/167 (71%), Gaps = 5/167 (2%)
Query: 4 VVATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRG 63
+ AT + CD+N LA+G LRV++PVF+ +G R F+GP TLK+FEDN LVR LE G
Sbjct: 2 MFATTDLCDANEERLAAGTLRVIEPVFRSFGGVRRFAGPAATLKLFEDNTLVRAALEQDG 61
Query: 64 EGKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHP 123
G+VLV+DGGGS+RCALVGGNLG+LA NGW GIVVNGC+RD E+ C GV AL +HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWVGIVVNGCVRDSAELAECRAGVLALAAHP 121
Query: 124 LKSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
KS+K+G G VPV + G IA G+W+YAD+DGILVS + L
Sbjct: 122 RKSDKRGAGVSDVPVDVRGTRIA-----PGDWIYADADGILVSDAAL 163
>sp|A9AHQ6|RRAAH_BURM1 Putative regulator of ribonuclease activity OS=Burkholderia
multivorans (strain ATCC 17616 / 249) GN=Bmul_1223 PE=3
SV=1
Length = 164
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/166 (56%), Positives = 118/166 (71%), Gaps = 5/166 (3%)
Query: 6 ATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEG 65
AT + CD++ LA+G LRVLQP + YG F+GP TLKVFEDN LVR LE G G
Sbjct: 4 ATTDLCDAHEDKLAAGTLRVLQPALRPYGGAARFAGPAATLKVFEDNTLVRAALEQDGGG 63
Query: 66 KVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLK 125
+VLV+DGG S+RCALVGGNLG LA NGW+GIVV+GC+RD E+ C +GV AL +HP K
Sbjct: 64 RVLVVDGGASLRCALVGGNLGALAEKNGWAGIVVHGCVRDAAELRECKVGVLALATHPRK 123
Query: 126 SNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELS 171
S+K+G G++ VPV + G IA GEW+YAD DG+LVS + L+
Sbjct: 124 SDKRGAGERDVPVTVLGTRIA-----PGEWIYADDDGVLVSATSLT 164
>sp|Q63SX7|RRAAH_BURPS Putative regulator of ribonuclease activity OS=Burkholderia
pseudomallei (strain K96243) GN=BPSL2194 PE=3 SV=1
Length = 165
Score = 192 bits (488), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 120/167 (71%), Gaps = 5/167 (2%)
Query: 4 VVATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRG 63
+ AT + CD++ LA+G LRVL+PVF+ +G R F+GP TLK+FEDN LVR LE G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 64 EGKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHP 123
G+VLV+DGGGS+RCALVGGNLG+LA NGW+GIVVNGC+RD DE+ C +GV AL +HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 124 LKSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
KS+K+G G PV + G I G+W+YAD+DG+LVS L
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIV-----PGDWIYADADGVLVSDDAL 163
>sp|A3NAY8|RRAAH_BURP6 Putative regulator of ribonuclease activity OS=Burkholderia
pseudomallei (strain 668) GN=BURPS668_2477 PE=3 SV=1
Length = 165
Score = 192 bits (488), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 120/167 (71%), Gaps = 5/167 (2%)
Query: 4 VVATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRG 63
+ AT + CD++ LA+G LRVL+PVF+ +G R F+GP TLK+FEDN LVR LE G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 64 EGKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHP 123
G+VLV+DGGGS+RCALVGGNLG+LA NGW+GIVVNGC+RD DE+ C +GV AL +HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 124 LKSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
KS+K+G G PV + G I G+W+YAD+DG+LVS L
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIV-----PGDWIYADADGVLVSDDAL 163
>sp|Q3JQZ3|RRAAH_BURP1 Putative regulator of ribonuclease activity OS=Burkholderia
pseudomallei (strain 1710b) GN=BURPS1710b_2618 PE=3 SV=1
Length = 165
Score = 192 bits (488), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 120/167 (71%), Gaps = 5/167 (2%)
Query: 4 VVATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRG 63
+ AT + CD++ LA+G LRVL+PVF+ +G R F+GP TLK+FEDN LVR LE G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 64 EGKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHP 123
G+VLV+DGGGS+RCALVGGNLG+LA NGW+GIVVNGC+RD DE+ C +GV AL +HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 124 LKSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
KS+K+G G PV + G I G+W+YAD+DG+LVS L
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIV-----PGDWIYADADGVLVSDDAL 163
>sp|A3NWR9|RRAAH_BURP0 Putative regulator of ribonuclease activity OS=Burkholderia
pseudomallei (strain 1106a) GN=BURPS1106A_2531 PE=3 SV=1
Length = 165
Score = 192 bits (488), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 120/167 (71%), Gaps = 5/167 (2%)
Query: 4 VVATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRG 63
+ AT + CD++ LA+G LRVL+PVF+ +G R F+GP TLK+FEDN LVR LE G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 64 EGKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHP 123
G+VLV+DGGGS+RCALVGGNLG+LA NGW+GIVVNGC+RD DE+ C +GV AL +HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 124 LKSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
KS+K+G G PV + G I G+W+YAD+DG+LVS L
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIV-----PGDWIYADADGVLVSDDAL 163
>sp|A1V5A8|RRAAH_BURMS Putative regulator of ribonuclease activity OS=Burkholderia mallei
(strain SAVP1) GN=BMASAVP1_A2095 PE=3 SV=1
Length = 165
Score = 192 bits (488), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 120/167 (71%), Gaps = 5/167 (2%)
Query: 4 VVATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRG 63
+ AT + CD++ LA+G LRVL+PVF+ +G R F+GP TLK+FEDN LVR LE G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 64 EGKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHP 123
G+VLV+DGGGS+RCALVGGNLG+LA NGW+GIVVNGC+RD DE+ C +GV AL +HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 124 LKSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
KS+K+G G PV + G I G+W+YAD+DG+LVS L
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIV-----PGDWIYADADGVLVSDDAL 163
>sp|Q62J86|RRAAH_BURMA Putative regulator of ribonuclease activity OS=Burkholderia mallei
(strain ATCC 23344) GN=BMA1593 PE=3 SV=1
Length = 165
Score = 192 bits (488), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 120/167 (71%), Gaps = 5/167 (2%)
Query: 4 VVATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRG 63
+ AT + CD++ LA+G LRVL+PVF+ +G R F+GP TLK+FEDN LVR LE G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 64 EGKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHP 123
G+VLV+DGGGS+RCALVGGNLG+LA NGW+GIVVNGC+RD DE+ C +GV AL +HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 124 LKSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
KS+K+G G PV + G I G+W+YAD+DG+LVS L
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIV-----PGDWIYADADGVLVSDDAL 163
>sp|A2SB35|RRAAH_BURM9 Putative regulator of ribonuclease activity OS=Burkholderia mallei
(strain NCTC 10229) GN=BMA10229_A3218 PE=3 SV=1
Length = 165
Score = 192 bits (488), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 120/167 (71%), Gaps = 5/167 (2%)
Query: 4 VVATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRG 63
+ AT + CD++ LA+G LRVL+PVF+ +G R F+GP TLK+FEDN LVR LE G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 64 EGKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHP 123
G+VLV+DGGGS+RCALVGGNLG+LA NGW+GIVVNGC+RD DE+ C +GV AL +HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 124 LKSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
KS+K+G G PV + G I G+W+YAD+DG+LVS L
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIV-----PGDWIYADADGVLVSDDAL 163
>sp|A3MKY3|RRAAH_BURM7 Putative regulator of ribonuclease activity OS=Burkholderia mallei
(strain NCTC 10247) GN=BMA10247_1368 PE=3 SV=1
Length = 165
Score = 192 bits (488), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 120/167 (71%), Gaps = 5/167 (2%)
Query: 4 VVATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRG 63
+ AT + CD++ LA+G LRVL+PVF+ +G R F+GP TLK+FEDN LVR LE G
Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDG 61
Query: 64 EGKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHP 123
G+VLV+DGGGS+RCALVGGNLG+LA NGW+GIVVNGC+RD DE+ C +GV AL +HP
Sbjct: 62 AGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHP 121
Query: 124 LKSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
KS+K+G G PV + G I G+W+YAD+DG+LVS L
Sbjct: 122 RKSDKRGAGVSDAPVDVRGTRIV-----PGDWIYADADGVLVSDDAL 163
>sp|B3R2J3|RRAAH_CUPTR Putative regulator of ribonuclease activity OS=Cupriavidus
taiwanensis (strain R1 / LMG 19424) GN=RALTA_A1769 PE=3
SV=1
Length = 165
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 116/165 (70%), Gaps = 5/165 (3%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD++ LA G LRV+ PVF+ +G+ +F+GP TLKVFEDN LVR LE+ G G+
Sbjct: 5 TTDLCDAHEDRLAEGTLRVMAPVFRAFGKQPAFAGPAATLKVFEDNSLVRATLESPGRGR 64
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLVIDGGGS+RCALVGGNLG LA NGW GIVVNGCIRD E++ C IG+RAL +HP KS
Sbjct: 65 VLVIDGGGSLRCALVGGNLGLLAEKNGWVGIVVNGCIRDTAELDVCDIGIRALAAHPQKS 124
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELS 171
K+ G+ V V + G+ +R G W+Y D DGILV+ +L
Sbjct: 125 QKRNVGESEV-----TVQMPGAVVRPGNWIYVDVDGILVADDKLE 164
>sp|B2JIG2|RRAAH_BURP8 Putative regulator of ribonuclease activity OS=Burkholderia
phymatum (strain DSM 17167 / STM815) GN=Bphy_1374 PE=3
SV=1
Length = 164
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 118/165 (71%), Gaps = 5/165 (3%)
Query: 6 ATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEG 65
ATA+ CD++ L +G LRVL PVF +G+ F G VTLKVFEDN LVR LE +G
Sbjct: 4 ATADLCDAHEDQLTAGTLRVLDPVFSRFGRASRFGGEAVTLKVFEDNTLVRATLEEKGVA 63
Query: 66 KVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLK 125
+VLV+DGGGS+RCALVGGNLG+L NGW+GIVV GC+RD E+N C +G+ AL +HP +
Sbjct: 64 RVLVVDGGGSLRCALVGGNLGKLGEKNGWAGIVVFGCVRDTLELNECNLGIIALATHPQR 123
Query: 126 SNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
S K+G G++ V + + GS +R GEW+YADSDG+LVS + L
Sbjct: 124 SQKRGGGERDV-----SLRLPGSVVRPGEWIYADSDGVLVSSAPL 163
>sp|Q0K9J4|RRAA_CUPNH Putative regulator of ribonuclease activity OS=Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
GN=H16_A2230 PE=3 SV=1
Length = 165
Score = 186 bits (473), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 115/164 (70%), Gaps = 5/164 (3%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD++ LA G LRV+ PVF+ +G+ +F+GP TLKVFEDN LVR LE G+G+
Sbjct: 5 TTDLCDAHEDRLADGTLRVMAPVFRAFGKQGAFAGPAATLKVFEDNSLVRTALEAPGQGR 64
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLVIDGGGS+RCALVGGNLG LA NGW GIVVNGCIRD E++ C IG+RAL HP KS
Sbjct: 65 VLVIDGGGSLRCALVGGNLGLLAEKNGWVGIVVNGCIRDTAELDVCDIGIRALAVHPQKS 124
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
K+ G+ V V + G+ +R G W+Y D+DG+LVS L
Sbjct: 125 QKRNVGESDV-----AVQMPGAVVRPGNWIYVDADGVLVSDERL 163
>sp|B2SXN2|RRAAH_BURPP Putative regulator of ribonuclease activity OS=Burkholderia
phytofirmans (strain DSM 17436 / PsJN) GN=Bphyt_2492
PE=3 SV=1
Length = 164
Score = 186 bits (472), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 119/166 (71%), Gaps = 5/166 (3%)
Query: 6 ATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEG 65
ATA+ CD++ LA G LRVL+PVF ++ + FSG VTLKVFEDN LVR LE +G G
Sbjct: 4 ATADLCDAHEDQLALGTLRVLEPVFHLFSRAECFSGEAVTLKVFEDNALVRATLEEKGAG 63
Query: 66 KVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLK 125
+VLVIDGGGS+RCALVGGNL QLA NGW+GIV+NGC+RD E+N +G+ AL + P +
Sbjct: 64 RVLVIDGGGSLRCALVGGNLAQLAEQNGWAGIVLNGCVRDALELNEVNVGIAALTTSPRR 123
Query: 126 SNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELS 171
K G G++ V V++ G+ +R GEW+YAD DG+LV+ + L+
Sbjct: 124 GQKLGTGERDV-----AVHLPGALVRPGEWVYADIDGVLVASAALN 164
>sp|Q13X79|RRAAH_BURXL Putative regulator of ribonuclease activity OS=Burkholderia
xenovorans (strain LB400) GN=Bxeno_A2772 PE=3 SV=1
Length = 164
Score = 183 bits (464), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 117/166 (70%), Gaps = 5/166 (3%)
Query: 6 ATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEG 65
ATA+ CD++ LA G LRVL+PVF ++ + FSG VTLKVFEDN LVR LE +G G
Sbjct: 4 ATADLCDAHEDQLALGTLRVLEPVFHLFSRAGCFSGEAVTLKVFEDNALVRATLEEKGAG 63
Query: 66 KVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLK 125
+VLV+DGGGS RCALVGGNL Q+A NGW+GIV+NGC+RD E+N +G+ AL + P +
Sbjct: 64 RVLVVDGGGSQRCALVGGNLAQIAQQNGWAGIVLNGCVRDTLELNEVNVGIAALATCPRR 123
Query: 126 SNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELS 171
K G G++ V V + G+ +R GEW+YADSDG+LV+ + L
Sbjct: 124 GQKLGTGERGV-----AVQLPGALVRPGEWIYADSDGVLVASAALK 164
>sp|Q8XZP1|RRAAH_RALSO Putative regulator of ribonuclease activity OS=Ralstonia
solanacearum (strain GMI1000) GN=RSc1354 PE=3 SV=2
Length = 165
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 120/167 (71%), Gaps = 5/167 (2%)
Query: 4 VVATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRG 63
++ + CD++ LASG +RVL PVF+ +G +F+GP TLKVFEDN LVR +LE G
Sbjct: 2 MIPVTDLCDAHEDQLASGAVRVLAPVFRSFGARAAFAGPAATLKVFEDNGLVRAMLEQPG 61
Query: 64 EGKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHP 123
EG+VLV+DGGGS+RCALVGGNL +LA +NGW G++VNGC+RD E+ C +GV AL +HP
Sbjct: 62 EGRVLVVDGGGSLRCALVGGNLAKLAEDNGWEGVLVNGCVRDTRELAACNVGVHALAAHP 121
Query: 124 LKSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
KS KK G++ + GV + G++I GEW+Y D DG+LVS+ L
Sbjct: 122 RKSFKKNQGERDI-----GVQMPGAYIHPGEWIYGDEDGVLVSRERL 163
>sp|Q47BF5|RRAAH_DECAR Putative regulator of ribonuclease activity OS=Dechloromonas
aromatica (strain RCB) GN=Daro_3096 PE=3 SV=1
Length = 163
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 112/165 (67%), Gaps = 6/165 (3%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD + L +RV+ P+FQ YG SFSG +VTLK+FEDN LVRE+ G+GK
Sbjct: 5 TPDLCDEFESELGK-TVRVVTPMFQRYGGRTSFSGQIVTLKIFEDNSLVREVFGEDGKGK 63
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLVIDGGGS+RCALVG L LA+ NGW G+VV GCIRD +ING IGVRAL +HP K+
Sbjct: 64 VLVIDGGGSLRCALVGDQLAILANKNGWEGVVVYGCIRDSGDINGIDIGVRALNTHPQKT 123
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELS 171
KKG GDK+V V GV GE+LYAD DG+LVS L+
Sbjct: 124 LKKGVGDKNVAVTFGGVT-----FNPGEYLYADEDGVLVSGKALT 163
>sp|Q0A9G6|RRAAH_ALHEH Putative regulator of ribonuclease activity OS=Alkalilimnicola
ehrlichei (strain MLHE-1) GN=Mlg_1172 PE=3 SV=1
Length = 161
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 110/166 (66%), Gaps = 10/166 (6%)
Query: 5 VATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGE 64
V T + CD A +LRV+ P+F+ +G F GPV T+K+FEDN VRE L GE
Sbjct: 3 VPTTDLCDDFA-----DELRVMNPMFRDFGGRVRFHGPVTTVKLFEDNSAVREALSEPGE 57
Query: 65 GKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPL 124
G+VLV+DGGGSMRCAL+G NL L NGW+G+VV GC+RD E+ +GV+AL HPL
Sbjct: 58 GRVLVVDGGGSMRCALLGDNLAALGQKNGWAGVVVYGCVRDSAELATIDLGVKALNVHPL 117
Query: 125 KSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
KS KKG G++ V V AG+ I G+WLYAD DGI+V+++ L
Sbjct: 118 KSVKKGIGERDVTVTFAGITIQA-----GDWLYADEDGIVVARNSL 158
>sp|Q21X23|RRAAH_RHOFD Putative regulator of ribonuclease activity OS=Rhodoferax
ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
GN=Rfer_1955 PE=3 SV=1
Length = 173
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 115/178 (64%), Gaps = 14/178 (7%)
Query: 1 MAGVVATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLE 60
M AT + CD++ + SG RVL PVF+ +G R F GPVVT+K FEDN V+ +E
Sbjct: 1 MTPSFATCDLCDAHKNDV-SGAFRVLPPVFRDFGGVRQFCGPVVTVKCFEDNSSVKAAVE 59
Query: 61 TRGE--------GKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGC 112
+ G GKVLV+DGGGS+R AL+GGNLG A NGW+G+V++GC+RDV E+
Sbjct: 60 SVGYQETPAGRVGKVLVVDGGGSLRRALLGGNLGAAAARNGWAGVVIDGCVRDVSELAAV 119
Query: 113 GIGVRALGSHPLKSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
G+G+RAL S PL + K+G G + + I GV+ +R G+WLYAD DG++++ L
Sbjct: 120 GLGIRALASMPLPTEKRGEGQSDLALQIQGVW-----VRPGDWLYADEDGMVLAAGRL 172
>sp|Q7NXI6|RRAAH_CHRVO Putative regulator of ribonuclease activity OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=CV_1640 PE=3
SV=1
Length = 159
Score = 156 bits (395), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 111/166 (66%), Gaps = 10/166 (6%)
Query: 5 VATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGE 64
+AT + CD+ A +++VL PVFQ +G F GP+ TLK+FEDN LVR++L G
Sbjct: 3 LATTDLCDAFDA-----EIQVLDPVFQSFGGHARFHGPIATLKLFEDNSLVRQMLGEPGN 57
Query: 65 GKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPL 124
G+VLV+DGGGS RCAL+G LG+LA NGW+G+V++GC+RD + +GV+AL +HP
Sbjct: 58 GRVLVVDGGGSRRCALLGDQLGELAVKNGWAGLVIDGCVRDSAALGKLPLGVKALAAHPR 117
Query: 125 KSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
KS K+ G + +P+ +AG I G+WLYAD DG++VS L
Sbjct: 118 KSVKRDSGQRDLPLRVAGCDIL-----PGQWLYADEDGVIVSGRPL 158
>sp|Q3KFE1|RRAAH_PSEPF Putative regulator of ribonuclease activity OS=Pseudomonas
fluorescens (strain Pf0-1) GN=Pfl01_1772 PE=3 SV=1
Length = 163
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 111/166 (66%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +VL+P+F +G SF G +VT+K FEDN LV+E E +G GK
Sbjct: 6 TPDLCDAYPELV-----QVLEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQAELKGNGK 60
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+RCAL+G + + A NGW G+V+ GCIRDVD I +GV+AL SHP K+
Sbjct: 61 VLVVDGGGSLRCALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALASHPKKT 120
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
K+G GD +VPV AGV G+++YAD++G+++S S L +
Sbjct: 121 EKRGLGDLNVPVTFAGVT-----FHPGQYIYADNNGVIISPSPLKM 161
>sp|Q4KFJ3|RRAAH_PSEF5 Putative regulator of ribonuclease activity OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=PFL_1871
PE=3 SV=1
Length = 163
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 114/166 (68%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +V++P+F +G SF G +VT+K FEDN LV+E +E +G+GK
Sbjct: 6 TPDLCDAYPDLV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVELKGQGK 60
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+R AL+G L + A NGW G+V+ GCIRDVD I +GV+AL SHP+K+
Sbjct: 61 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALASHPMKT 120
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +V V AGV R GE++YAD++G++VS S L +
Sbjct: 121 DKRGIGDLNVAVTFAGVT-----FRPGEYVYADNNGVIVSPSPLKM 161
>sp|C1DHC2|RRAAH_AZOVD Putative regulator of ribonuclease activity OS=Azotobacter
vinelandii (strain DJ / ATCC BAA-1303) GN=Avin_23290
PE=3 SV=1
Length = 162
Score = 154 bits (388), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 113/166 (68%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +V++P+F +G SF G +VT+K FEDN LV++ ++T G+GK
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKDQVDTDGKGK 59
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+R AL+G L + A NGW G+VV GCIRDVD I +GV+AL +HP+K+
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAARNGWEGLVVYGCIRDVDVIAQTDLGVQALATHPMKT 119
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +VPV GV R GE+LYAD++GI+VS L +
Sbjct: 120 DKRGIGDLNVPVTFGGVT-----FRPGEYLYADNNGIIVSPQPLKM 160
>sp|Q5P203|RRAAH_AROAE Putative regulator of ribonuclease activity OS=Aromatoleum
aromaticum (strain EbN1) GN=AZOSEA25360 PE=3 SV=1
Length = 159
Score = 153 bits (387), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 10/164 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
TA+ CD+N + ++++ P+F+ YG +F G + TLKVFEDN LVR LE G+GK
Sbjct: 5 TADLCDANES-----RVKIVSPMFRSYGGRGAFCGRITTLKVFEDNSLVRTALEGPGQGK 59
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGSMRCALVG L L N W+G++V GCIRD I +GV ALGSHPLKS
Sbjct: 60 VLVVDGGGSMRCALVGDQLALLGVKNQWAGVIVYGCIRDSKAIGTMELGVFALGSHPLKS 119
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
KKG GD + V GV G ++YAD DG++VS+S L
Sbjct: 120 IKKGAGDVDIAVTFGGVTFT-----PGHFIYADEDGVVVSESSL 158
>sp|B1J596|RRAAH_PSEPW Putative regulator of ribonuclease activity OS=Pseudomonas putida
(strain W619) GN=PputW619_1602 PE=3 SV=1
Length = 163
Score = 153 bits (387), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 113/166 (68%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +VL+P+F +G SF G +VT+K FEDN V+E +E G+GK
Sbjct: 6 TPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSRVKEQVELDGKGK 60
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+RCAL+G L + A NGW G+V+ GC+RDVD + +GV+AL SHP+K+
Sbjct: 61 VLVVDGGGSLRCALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTSVGVQALASHPMKT 120
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +V V AGV R GE++YAD++G++VS S L +
Sbjct: 121 DKRGIGDLNVAVTFAGVT-----FRPGEYVYADNNGVIVSPSPLEM 161
>sp|Q4ZUN7|RRAAH_PSEU2 Putative regulator of ribonuclease activity OS=Pseudomonas syringae
pv. syringae (strain B728a) GN=Psyr_2092 PE=3 SV=1
Length = 162
Score = 153 bits (387), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 111/166 (66%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +V++P+F +G SF G +VTLK FEDN VRE +E G+GK
Sbjct: 5 TPDLCDAYPDLI-----QVVEPMFSNFGGRDSFGGQIVTLKCFEDNSRVREQVELDGKGK 59
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+RCAL+G L A NGW G+++ GCIRDVD I +GV+AL SHP K+
Sbjct: 60 VLVVDGGGSLRCALLGDMLADKAAKNGWEGMLIYGCIRDVDVIAQTDLGVQALASHPKKT 119
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
K+G G+ +VPV GV R GE+LYAD++G+++S S L++
Sbjct: 120 EKRGIGELNVPVTFGGVT-----FRPGEYLYADNNGVIISPSTLTM 160
>sp|B8GM40|RRAAH_THISH Putative regulator of ribonuclease activity OS=Thioalkalivibrio sp.
(strain HL-EbGR7) GN=Tgr7_2551 PE=3 SV=1
Length = 161
Score = 153 bits (386), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 10/165 (6%)
Query: 3 GVVATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETR 62
G+ ATA+ CD + A+G V + F YG +FSG +VT++ FEDNVLVR+ LE
Sbjct: 7 GLTATADLCDQHGE--AAG---VCETHFGDYGGITAFSGEIVTVRCFEDNVLVRQTLEAE 61
Query: 63 GEGKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSH 122
G GKVLV+DGGGS+RCAL G L Q A +NGW+G++VNGCIRDV I IGV+ALG+H
Sbjct: 62 GRGKVLVVDGGGSLRCALFGDMLAQTALDNGWAGVIVNGCIRDVAVIVTLPIGVKALGTH 121
Query: 123 PLKSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSK 167
P KS K+G G +VPV + R GE ++AD DG++V K
Sbjct: 122 PRKSEKRGEGAVNVPVSFGAIT-----FRPGERVFADEDGVVVLK 161
>sp|A4XU32|RRAAH_PSEMY Putative regulator of ribonuclease activity OS=Pseudomonas
mendocina (strain ymp) GN=Pmen_2087 PE=3 SV=1
Length = 162
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 113/166 (68%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +V++P+F YG SF G +VT+K EDN LV+E ++ GEG+
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFANYGGRDSFGGQMVTIKCHEDNSLVKEQVDLPGEGR 59
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+R AL+G L + A NGW+GIVV GCIRDVD I +GV+AL SHP+K+
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWAGIVVYGCIRDVDVIAQADLGVQALASHPMKT 119
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +VPV GV + GE+LYAD++GI+VS LS+
Sbjct: 120 DKRGIGDLNVPVTFGGVT-----FKPGEYLYADNNGIIVSPQALSM 160
>sp|A5W6M0|RRAAH_PSEP1 Putative regulator of ribonuclease activity OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=Pput_3656 PE=3 SV=1
Length = 163
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 113/166 (68%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +VL+P+F +G SF G +VT+K FEDN LV+E +E G+GK
Sbjct: 6 TPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVELDGKGK 60
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+R AL+G L + A NGW G+V+ GC+RDVD + +GV+AL SHP+K+
Sbjct: 61 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALASHPMKT 120
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +V V AGV R GE++YAD++G+LVS S L +
Sbjct: 121 DKRGIGDLNVVVTFAGVT-----FRPGEYVYADNNGVLVSPSPLKM 161
>sp|B0KG79|RRAAH_PSEPG Putative regulator of ribonuclease activity OS=Pseudomonas putida
(strain GB-1) GN=PputGB1_1595 PE=3 SV=1
Length = 163
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 113/166 (68%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +VL+P+F +G SF G +VT+K FEDN LV+E +E G+GK
Sbjct: 6 TPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVELDGKGK 60
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+R AL+G L + A NGW G+V+ GC+RDVD + +GV+AL SHP+K+
Sbjct: 61 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALASHPMKT 120
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +V V AGV R GE++YAD++G+LVS S L +
Sbjct: 121 DKRGIGDLNVVVAFAGVT-----FRPGEYVYADNNGVLVSPSPLEM 161
>sp|Q607E7|RRAAH_METCA Putative regulator of ribonuclease activity OS=Methylococcus
capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)
GN=MCA1813 PE=3 SV=1
Length = 161
Score = 151 bits (381), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 107/165 (64%), Gaps = 8/165 (4%)
Query: 6 ATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEG 65
TA CD + L++++P+F+ +G F G + TLKVFED+VL+RE L +G
Sbjct: 4 TTAGLCDQ---FHGTHPLQIVEPLFRPFGAVSRFHGRITTLKVFEDSVLIRETLAQEVDG 60
Query: 66 KVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLK 125
+VLVIDGG S RCAL+GGNL +LA +NGW GI+V GC+RD E+ IG+RAL +HPL
Sbjct: 61 RVLVIDGGASHRCALLGGNLARLAADNGWQGIIVYGCVRDSVELGTVPIGIRALHTHPLD 120
Query: 126 SNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
S+K+G GD+ + A V R +LYAD DGI+VS+ +L
Sbjct: 121 SHKRGGGDRDCLITFASVN-----FRTDHYLYADEDGIVVSEEKL 160
>sp|C3K0T6|RRAAH_PSEFS Putative regulator of ribonuclease activity OS=Pseudomonas
fluorescens (strain SBW25) GN=PFLU_4617 PE=3 SV=1
Length = 163
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 111/166 (66%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +VL+P+F +G SF G +VTLK FEDN LV+E + G GK
Sbjct: 6 TPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGEIVTLKCFEDNSLVKEQADQPGAGK 60
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+R AL+G + + A NGW G+V+ GCIRDVD I +GV+AL SHP+K+
Sbjct: 61 VLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCIRDVDVIAQTDLGVQALASHPMKT 120
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +V V AGV R GE++YAD++G++VS S L +
Sbjct: 121 DKRGIGDLNVVVTFAGVT-----FRPGEYIYADNNGVIVSPSPLKM 161
>sp|C1D7M1|RRAAH_LARHH Putative regulator of ribonuclease activity OS=Laribacter
hongkongensis (strain HLHK9) GN=LHK_01472 PE=3 SV=1
Length = 159
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 103/164 (62%), Gaps = 10/164 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
TA+ CD S L++L P + +G F+G + TLKVFEDN VRE+L GEG+
Sbjct: 5 TADLCDE-----FSDRLQILAPGYASFGGHARFAGRIATLKVFEDNSRVREMLSEPGEGR 59
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS RCALVG LG LA NGW+GIVV GCIRD + +GVRAL +HPLKS
Sbjct: 60 VLVVDGGGSRRCALVGDQLGALAVRNGWAGIVVYGCIRDSVALGLLPLGVRALATHPLKS 119
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSEL 170
K G G++ + V G+ R G+WLYAD DG++ S L
Sbjct: 120 VKNGVGEREL-----AVTFDGATFRPGDWLYADEDGVITSPDPL 158
>sp|Q88L51|RRAAH_PSEPK Putative regulator of ribonuclease activity OS=Pseudomonas putida
(strain KT2440) GN=PP_2084 PE=3 SV=1
Length = 163
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 112/166 (67%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +VL+P+F +G SF G +VT+K FEDN LV+E +E G+GK
Sbjct: 6 TPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVELDGKGK 60
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+R AL+G L + A NGW G+V+ GC+RDVD + +GV+AL SHP+K+
Sbjct: 61 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLIQTDVGVQALASHPMKT 120
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +V V AGV R GE++YAD++G+LVS L +
Sbjct: 121 DKRGIGDLNVVVTFAGVT-----FRPGEYVYADNNGVLVSPKPLKM 161
>sp|Q1ICM4|RRAAH_PSEE4 Putative regulator of ribonuclease activity OS=Pseudomonas
entomophila (strain L48) GN=PSEEN1744 PE=3 SV=1
Length = 163
Score = 150 bits (378), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 113/166 (68%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +VL+P+F +G SF G +VT+K FEDN LV+E ++ G+GK
Sbjct: 6 TPDLCDAYPDLV-----QVLEPMFSNFGGRDSFGGQIVTIKCFEDNSLVKEQVDLDGKGK 60
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+R AL+G L + A NGW G+V+ GC+RDVD + +GV+AL SHP+K+
Sbjct: 61 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGLVIYGCVRDVDVLVQTDVGVQALASHPMKT 120
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +V V AGV R GE++YAD++G++VS S L +
Sbjct: 121 DKRGIGDLNVAVTFAGVT-----FRPGEYVYADNNGVIVSPSPLKM 161
>sp|Q9I2W7|RRAAH_PSEAE Putative regulator of ribonuclease activity OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=PA1772 PE=1 SV=1
Length = 162
Score = 150 bits (378), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 111/166 (66%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +V++P+F +G SF G +VT+K FEDN LV+E ++ G+GK
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVDKDGKGK 59
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+R AL+G L + A NGW GIVV GCIRDVD I +GV+AL SHPLK+
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKT 119
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +V V GV R GE++YAD++GI+VS L +
Sbjct: 120 DKRGIGDLNVAVTFGGVT-----FRPGEFVYADNNGIIVSPQALKM 160
>sp|Q02KR3|RRAAH_PSEAB Putative regulator of ribonuclease activity OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=PA14_41640 PE=3 SV=1
Length = 162
Score = 150 bits (378), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 111/166 (66%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +V++P+F +G SF G +VT+K FEDN LV+E ++ G+GK
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVDKDGKGK 59
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+R AL+G L + A NGW GIVV GCIRDVD I +GV+AL SHPLK+
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKT 119
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +V V GV R GE++YAD++GI+VS L +
Sbjct: 120 DKRGIGDLNVAVTFGGVT-----FRPGEFVYADNNGIIVSPQALKM 160
>sp|B7VBA7|RRAAH_PSEA8 Putative regulator of ribonuclease activity OS=Pseudomonas
aeruginosa (strain LESB58) GN=PLES_35571 PE=3 SV=1
Length = 162
Score = 150 bits (378), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 111/166 (66%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +V++P+F +G SF G +VT+K FEDN LV+E ++ G+GK
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVDKDGKGK 59
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+R AL+G L + A NGW GIVV GCIRDVD I +GV+AL SHPLK+
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKT 119
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +V V GV R GE++YAD++GI+VS L +
Sbjct: 120 DKRGIGDLNVAVTFGGVT-----FRPGEFVYADNNGIIVSPQALKM 160
>sp|A4VL60|RRAAH_PSEU5 Putative regulator of ribonuclease activity OS=Pseudomonas stutzeri
(strain A1501) GN=PST_2040 PE=3 SV=1
Length = 162
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 112/166 (67%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +V++P+F +G SF G +VT+K FEDN LV++ ++ G GK
Sbjct: 5 TPDLCDAYPDLV-----QVVEPLFSNFGGRDSFGGEIVTIKCFEDNSLVKDQVDVDGTGK 59
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
V+V+DGGGS+R AL+G L + A NGW G+++ GC+RDVD + +GV+AL SHP+K+
Sbjct: 60 VMVVDGGGSLRRALLGDMLAEKAARNGWEGLIIYGCVRDVDVLAQTELGVQALASHPMKT 119
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +VPV GV R GE++YAD++GI+VS LS+
Sbjct: 120 DKRGIGDLNVPVTFCGVT-----FRPGEYVYADNNGIIVSPEPLSM 160
>sp|A6V753|RRAAH_PSEA7 Putative regulator of ribonuclease activity OS=Pseudomonas
aeruginosa (strain PA7) GN=PSPA7_3534 PE=3 SV=1
Length = 162
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 112/166 (67%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +V++P+F +G +F G +VT+K FEDN LV+E ++ G+GK
Sbjct: 5 TPDLCDAYPELV-----QVVEPMFSNFGGRDAFGGEIVTIKCFEDNSLVKEQVDKDGKGK 59
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+R AL+G L + A NGW GIVV GCIRDVD I +GV+AL SHP+K+
Sbjct: 60 VLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTELGVQALASHPMKT 119
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +V V GV R GE++YAD++GI+VS L++
Sbjct: 120 DKRGIGDLNVVVTFGGVT-----FRPGEFVYADNNGIIVSPQALNM 160
>sp|Q883Q6|RRAAH_PSESM Putative regulator of ribonuclease activity OS=Pseudomonas syringae
pv. tomato (strain DC3000) GN=PSPTO_2294 PE=3 SV=1
Length = 162
Score = 146 bits (369), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 110/166 (66%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +V++P+ +G SF G +VTLK FEDN LV+E +E G+GK
Sbjct: 5 TPDLCDAYPELV-----QVVEPMLSNFGGRDSFGGQIVTLKCFEDNSLVKEQVELDGKGK 59
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+RCAL+G L + A +GW G+V+ GC+RDVD + +GV+AL S+P +S
Sbjct: 60 VLVVDGGGSLRCALLGDMLAEKAAKHGWEGLVIYGCVRDVDMLAQTDLGVQALASYPKRS 119
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
K+G G +PV GV R GE+LYAD++G+++S S L++
Sbjct: 120 EKRGVGQLDLPVTFGGVT-----FRPGEYLYADNNGVIISPSPLTM 160
>sp|Q48JZ3|RRAAH_PSE14 Putative regulator of ribonuclease activity OS=Pseudomonas syringae
pv. phaseolicola (strain 1448A / Race 6) GN=PSPPH_2063
PE=3 SV=1
Length = 164
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 113/168 (67%), Gaps = 12/168 (7%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLET--RGE 64
T + CD+ L+ +V++P+F +G SF G +VT+K FEDN LV+E +E +G+
Sbjct: 5 TPDLCDAYPDLI-----QVVEPMFSNFGGRDSFGGQIVTVKCFEDNSLVKEQVELDGKGK 59
Query: 65 GKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPL 124
GKVLV+DGGGS+RCAL+G L + A +GW G+++ GCIRDVD I +GV+AL SHP
Sbjct: 60 GKVLVVDGGGSLRCALLGDMLAEKAARSGWEGMLIYGCIRDVDVIAQTDLGVQALASHPK 119
Query: 125 KSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
K+ K+G GD +V V GV R GE+LYAD++G+++S S L++
Sbjct: 120 KTEKRGIGDLNVLVTFGGVT-----FRPGEYLYADNNGVIISPSPLTM 162
>sp|Q2SK70|RRAAH_HAHCH Putative regulator of ribonuclease activity OS=Hahella chejuensis
(strain KCTC 2396) GN=HCH_02125 PE=3 SV=1
Length = 164
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 110/166 (66%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L++ V++P+FQ +G SF G +VT+K FEDN +V++ ++ G GK
Sbjct: 5 TPDLCDAYPQLVS-----VVEPMFQNFGAKSSFGGEIVTVKCFEDNSVVKQQVDQPGHGK 59
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
V+V+DGGGS R AL+G L + A NGW GI++ GCIRDVD I +GV+ALG+HP+K+
Sbjct: 60 VMVVDGGGSKRAALLGDMLAEKAAANGWEGIIIYGCIRDVDVIRQTDLGVQALGTHPMKT 119
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD + + GV + G ++YAD++G++VS LS+
Sbjct: 120 DKRGIGDLNADITFGGVT-----FKPGHYVYADNNGVIVSPEPLSM 160
>sp|Q9S4U0|RRAAH_PSEFL Putative regulator of ribonuclease activity OS=Pseudomonas
fluorescens PE=3 SV=1
Length = 163
Score = 143 bits (360), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 109/166 (65%), Gaps = 10/166 (6%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ L+ +V++P+F +G SF G +VT+K FEDN LV+E + G GK
Sbjct: 6 TPDLCDAYPELV-----QVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQADQPGAGK 60
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGS+R AL+G + + A NGW G+V+ GC+RDVD + +GV+AL HP+K+
Sbjct: 61 VLVVDGGGSLRRALLGDMIAEKAAKNGWEGLVIYGCVRDVDVLAQTDLGVQALAPHPMKT 120
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
+K+G GD +V V A V R GE++YAD++G++VS S L +
Sbjct: 121 DKRGIGDLNVVVTFASVT-----FRPGEYVYADNNGVIVSPSPLKM 161
>sp|A1WU91|RRAAH_HALHL Putative regulator of ribonuclease activity OS=Halorhodospira
halophila (strain DSM 244 / SL1) GN=Hhal_0465 PE=3 SV=1
Length = 164
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 108/166 (65%), Gaps = 6/166 (3%)
Query: 7 TAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLETRGEGK 66
T + CD+ A LR + P+ YG F GPV TLK+FEDNV VRELL G+G
Sbjct: 5 TTDLCDAYADE-PGAQLRAMNPMLIGYGGRARFGGPVTTLKLFEDNVRVRELLSAPGDGG 63
Query: 67 VLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALGSHPLKS 126
VLV+DGGGSMRCAL+G L +L NGWSG ++ GC+RD E+ GV+AL +HPLKS
Sbjct: 64 VLVVDGGGSMRCALLGDRLAELGRENGWSGAIIYGCVRDSAELAQIDFGVQALNTHPLKS 123
Query: 127 NKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSELSI 172
KKG G++ V V AGV I+ G+WLYAD DG++V+ EL++
Sbjct: 124 QKKGLGERDVSVTFAGVT-----IQSGDWLYADEDGVVVASRELTL 164
>sp|Q9RW10|RRAAH_DEIRA Putative regulator of ribonuclease activity OS=Deinococcus
radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /
LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
GN=DR_0859 PE=3 SV=1
Length = 160
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 101/169 (59%), Gaps = 11/169 (6%)
Query: 1 MAGVVATAEACDSNAALLASGDLRVLQPVFQIYGQCRSFSGPVVTLKVFEDNVLVRELLE 60
M + T + D A +V PV + +G F G VTL++ E+N LVR+ L+
Sbjct: 1 MTDFIPTTDLSD------AQPQAQVAAPVLRDFGGRTRFQGAAVTLRISENNPLVRQTLQ 54
Query: 61 TRGEGKVLVIDGGGSMRCALVGGNLGQLAHNNGWSGIVVNGCIRDVDEINGCGIGVRALG 120
T G G+VLV+DGGGS+ CAL+GGNLG NGW G++++GC+RD E+ +G+RAL
Sbjct: 55 TPGAGRVLVVDGGGSLNCALLGGNLGVFGVENGWEGVIIHGCVRDTAELRELDLGIRALA 114
Query: 121 SHPLKSNKKGHGDKHVPVYIAGVYIAGSFIRDGEWLYADSDGILVSKSE 169
+HP +S K G++ VPV AGV IR G+ + AD DG LV +E
Sbjct: 115 AHPRRSGKLEEGERDVPVTFAGVT-----IRPGDHVVADEDGWLVLGAE 158
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.140 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,626,401
Number of Sequences: 539616
Number of extensions: 2941177
Number of successful extensions: 6573
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 6204
Number of HSP's gapped (non-prelim): 209
length of query: 172
length of database: 191,569,459
effective HSP length: 109
effective length of query: 63
effective length of database: 132,751,315
effective search space: 8363332845
effective search space used: 8363332845
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)