BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030765
MSGTITNAEKEKEKEQEQEQEIAGGKQDDAESCMQDQEPNDSEKNIDENLMQPSSQQEEE
IIKKKYAGIVPKKRPLISKDHERAFFDSADWALGKQGGQSQKPKGPLEPLRPKLQPTPHQ
QVRSRRSAYAPSDDEEDGGSNITTSDDQGFTPDCGNNNTSSPASEDQSSRE

High Scoring Gene Products

Symbol, full name Information P value
AT5G64130 protein from Arabidopsis thaliana 3.7e-22
AT1G69510 protein from Arabidopsis thaliana 5.5e-22
AT4G16146 protein from Arabidopsis thaliana 4.2e-15

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030765
        (171 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2164376 - symbol:AT5G64130 "AT5G64130" species...   157  3.7e-22   2
TAIR|locus:2007191 - symbol:AT1G69510 "AT1G69510" species...   256  5.5e-22   1
TAIR|locus:505006476 - symbol:AT4G16146 "AT4G16146" speci...   191  4.2e-15   1


>TAIR|locus:2164376 [details] [associations]
            symbol:AT5G64130 "AT5G64130" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] GO:GO:0005886 EMBL:CP002688 InterPro:IPR006760
            Pfam:PF04667 EMBL:AB008266 EMBL:AK316945 IPI:IPI00846765
            RefSeq:NP_001078792.1 UniGene:At.24633 PaxDb:A8MS32 PRIDE:A8MS32
            EnsemblPlants:AT5G64130.3 GeneID:836534 KEGG:ath:AT5G64130
            TAIR:At5g64130 eggNOG:NOG272037 HOGENOM:HOG000237718 OMA:CAPSEGG
            PhylomeDB:A8MS32 ProtClustDB:CLSN2690075 Genevestigator:A8MS32
            Uniprot:A8MS32
        Length = 140

 Score = 157 (60.3 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
 Identities = 36/67 (53%), Positives = 43/67 (64%)

Query:    74 RPLISKDHERAFFDSADWALXXXXXXXXXXXXXLEPLRPKLQPTPHQQVRSRRSAYAPSD 133
             R + ++DHERA+FDSADWAL             LE LRPKLQPT  QQ R R+S  APS+
Sbjct:    68 RCVYNQDHERAYFDSADWALGKQGVAKPKGP--LEALRPKLQPT-QQQTRYRKSPCAPSE 124

Query:   134 DEEDGGS 140
               EDGG+
Sbjct:   125 GGEDGGA 131

 Score = 115 (45.5 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
 Identities = 26/51 (50%), Positives = 33/51 (64%)

Query:    32 SCMQDQEPNDSEKNIDENLMQPSSQQEEEIIKKKYAGIVPKKRPLISKDHE 82
             S  +D +   +  N  E  M PSSQQEE ++KKKY G++PKK PLISK  E
Sbjct:     2 SSAEDVKEQGNLTNEAEKSM-PSSQQEEAVVKKKYGGLMPKKPPLISKVSE 51


>TAIR|locus:2007191 [details] [associations]
            symbol:AT1G69510 "AT1G69510" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC073178
            InterPro:IPR006760 Pfam:PF04667 HOGENOM:HOG000237718 EMBL:AY093229
            EMBL:AY084454 EMBL:AY128824 IPI:IPI00534306 RefSeq:NP_564967.1
            RefSeq:NP_849867.1 RefSeq:NP_974115.1 UniGene:At.43574
            STRING:Q9C787 PaxDb:Q9C787 PRIDE:Q9C787 EnsemblPlants:AT1G69510.1
            EnsemblPlants:AT1G69510.2 EnsemblPlants:AT1G69510.3 GeneID:843284
            KEGG:ath:AT1G69510 TAIR:At1g69510 eggNOG:NOG305581
            InParanoid:Q9C787 OMA:RARRMAY PhylomeDB:Q9C787
            ProtClustDB:CLSN2689108 ArrayExpress:Q9C787 Genevestigator:Q9C787
            Uniprot:Q9C787
        Length = 137

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 57/124 (45%), Positives = 72/124 (58%)

Query:    48 ENLMQPSSQQEEEIIKKKYAGIVPKKRPLISKDHERAFFDSADWALXXXXXXXXXXXXXL 107
             +N +    + EE  IKKKY G++PKK PLISKDHERAFFDSADWAL             L
Sbjct:    16 DNKVSDEMESEENAIKKKYGGLLPKKIPLISKDHERAFFDSADWALGKQKGQKPKGP--L 73

Query:   108 EPLRPKLQPTPHQQVRSRRSAYAPSDDEEDGGSNITTSDDQGFTPDCGNNNTSSPASEDQ 167
             E LRPKLQPTP QQ R+RR AY+  + E+    N    DDQ     C +   S+   +D 
Sbjct:    74 EALRPKLQPTPQQQPRARRMAYSSGETEDTEIDNNEAPDDQA----CASAVDSTNLKDDG 129

Query:   168 SSRE 171
              +++
Sbjct:   130 GAKD 133


>TAIR|locus:505006476 [details] [associations]
            symbol:AT4G16146 "AT4G16146" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0007623 "circadian rhythm" evidence=RCA]
            EMBL:CP002687 InterPro:IPR006760 Pfam:PF04667 IPI:IPI00545576
            RefSeq:NP_567486.1 UniGene:At.33107 PRIDE:F4JLP3
            EnsemblPlants:AT4G16146.1 GeneID:827304 KEGG:ath:AT4G16146
            OMA:WALCKQG Uniprot:F4JLP3
        Length = 102

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 41/82 (50%), Positives = 49/82 (59%)

Query:    54 SSQQEEEIIKKKYAGIVPKKRPLISKDHERAFFDSADWALXXXXXXXXXXX-XXLEPLRP 112
             S QQE      KY G+VPKK+PLISKD +RAFFDSADWAL              +E LRP
Sbjct:    14 SQQQESTSGANKYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASIDQRTIAAIEKLRP 73

Query:   113 KLQPTPHQQVRSRRSAYAPSDD 134
             KLQ TP +Q+  RR   A  ++
Sbjct:    74 KLQRTPRKQLSPRRPTCATGNE 95


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.305   0.124   0.351    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      171       145   0.00071  103 3  11 23  0.46    32
                                                     30  0.49    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  585 (62 KB)
  Total size of DFA:  143 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.49u 0.15s 20.64t   Elapsed:  00:00:01
  Total cpu time:  20.49u 0.15s 20.64t   Elapsed:  00:00:01
  Start:  Mon May 20 18:50:00 2013   End:  Mon May 20 18:50:01 2013

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