Query 030767
Match_columns 171
No_of_seqs 15 out of 17
Neff 2.6
Searched_HMMs 13730
Date Mon Mar 25 06:17:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030767.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030767hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2c1xa1 c.87.1.10 (A:7-456) UD 36.1 3.4 0.00025 30.5 -0.1 53 62-117 368-421 (450)
2 d1hl9a2 c.1.8.11 (A:7-356) Put 31.1 7.7 0.00056 30.7 1.3 27 99-125 322-348 (350)
3 d2bhua2 b.71.1.1 (A:531-602) G 26.6 8.3 0.00061 25.7 0.6 12 154-165 38-49 (72)
4 d1lfma_ a.3.1.1 (A:) Mitochond 16.9 17 0.0012 22.1 0.5 8 3-11 14-21 (103)
5 d3c2ca_ a.3.1.1 (A:) Cytochrom 16.0 18 0.0013 22.7 0.5 9 2-11 13-21 (112)
6 d2q7wa1 c.67.1.1 (A:1-396) Asp 14.6 1.5E+02 0.011 21.7 5.7 46 73-120 31-83 (396)
7 d1cota_ a.3.1.1 (A:) Cytochrom 13.0 24 0.0018 23.1 0.4 9 3-12 14-22 (121)
8 d1ogyb_ a.138.1.3 (B:) Peripla 12.9 30 0.0022 25.0 1.0 23 2-25 56-78 (127)
9 d1vyda_ a.3.1.1 (A:) Cytochrom 12.5 25 0.0018 23.2 0.4 10 2-12 12-21 (116)
10 d1jhfa1 a.4.5.2 (A:2-72) LexA 12.4 42 0.0031 20.7 1.5 16 61-76 22-37 (71)
No 1
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}
Probab=36.06 E-value=3.4 Score=30.51 Aligned_cols=53 Identities=15% Similarity=0.172 Sum_probs=37.3
Q ss_pred CCc-hHHHHHHHHhcCCccCCCCCChhhhhhhhhcccCCCCCCCCchHHHHHHHhhc
Q 030767 62 KQH-SVMQIERAISAGTFRDAEPKDLDQEKITYNGILPDLSGMFEGPVEKQIRETGE 117 (171)
Q Consensus 62 ~qp-sv~qieRAiGags~rd~e~~~~~~~~~t~mdLl~~~ig~~Eg~vEKkLREtgE 117 (171)
-|+ +...|+++.|+|-.-+.+.-..++-..+...||.++.++ +.-||+++.+|
T Consensus 368 DQ~~na~rv~~~~G~G~~l~~~~~t~~~l~~ai~~vL~d~~y~---~~~~r~~~l~~ 421 (450)
T d2c1xa1 368 DQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGK---KLRENLRALRE 421 (450)
T ss_dssp THHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHHHH---HHHHHHHHHHH
T ss_pred chHHHHHHHHHHcCcEEEecCCCcCHHHHHHHHHHHhcCcHHH---HHHHHHHHHHH
Confidence 344 556789999999887766666777888999999854321 34467776655
No 2
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=31.07 E-value=7.7 Score=30.73 Aligned_cols=27 Identities=19% Similarity=0.403 Sum_probs=21.6
Q ss_pred CCCCCCCchHHHHHHHhhccccccchh
Q 030767 99 DLSGMFEGPVEKQIRETGEWFAKNSEE 125 (171)
Q Consensus 99 ~~ig~~Eg~vEKkLREtgEWvvd~TE~ 125 (171)
+.-|...-+-.++|+|+|+|+..|.|.
T Consensus 322 ~~dG~Ip~~~~~~L~~iG~Wl~~nGEa 348 (350)
T d1hl9a2 322 KGDGTIPDLQKERLLGLGEWLRKYGDA 348 (350)
T ss_dssp CTTSCCCHHHHHHHHHHHHHHHHHGGG
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHhcCc
Confidence 455556667788999999999988885
No 3
>d2bhua2 b.71.1.1 (A:531-602) Glycosyltrehalose trehalohydrolase {Deinococcus radiodurans [TaxId: 1299]}
Probab=26.63 E-value=8.3 Score=25.74 Aligned_cols=12 Identities=42% Similarity=0.833 Sum_probs=9.2
Q ss_pred hcceeccCCCcc
Q 030767 154 SGVIKLPFSMPF 165 (171)
Q Consensus 154 sGvIKLPFsiPf 165 (171)
.--+||||++|-
T Consensus 38 v~~~~lpfs~p~ 49 (72)
T d2bhua2 38 VAEVKLPFTVPR 49 (72)
T ss_dssp GGGSCCSSCCCC
T ss_pred hhhccCCccchH
Confidence 345799999983
No 4
>d1lfma_ a.3.1.1 (A:) Mitochondrial cytochrome c {Bluefin tuna (Thunnus thynnus) [TaxId: 8237]}
Probab=16.90 E-value=17 Score=22.13 Aligned_cols=8 Identities=38% Similarity=1.211 Sum_probs=6.8
Q ss_pred ccccccccc
Q 030767 3 CLSCCHYIT 11 (171)
Q Consensus 3 cLs~~~~i~ 11 (171)
|.+| |+|.
T Consensus 14 C~~C-H~~~ 21 (103)
T d1lfma_ 14 CAQC-HTVE 21 (103)
T ss_dssp TTTT-CCCS
T ss_pred Chhc-cCcc
Confidence 8898 9885
No 5
>d3c2ca_ a.3.1.1 (A:) Cytochrome c2 {Rhodospirillum rubrum [TaxId: 1085]}
Probab=15.96 E-value=18 Score=22.70 Aligned_cols=9 Identities=44% Similarity=1.232 Sum_probs=7.0
Q ss_pred cccccccccc
Q 030767 2 SCLSCCHYIT 11 (171)
Q Consensus 2 ~cLs~~~~i~ 11 (171)
-|.+| |+|.
T Consensus 13 ~C~~C-H~~~ 21 (112)
T d3c2ca_ 13 KCLAC-HTFD 21 (112)
T ss_dssp GGTTT-CCCS
T ss_pred HHHHh-CCCc
Confidence 38898 9874
No 6
>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}
Probab=14.63 E-value=1.5e+02 Score=21.75 Aligned_cols=46 Identities=20% Similarity=0.203 Sum_probs=25.2
Q ss_pred HhcCCccCCCCCC--hhhhhhhhhcccCC----CCCCCCchHHHHHHHh-hcccc
Q 030767 73 ISAGTFRDAEPKD--LDQEKITYNGILPD----LSGMFEGPVEKQIRET-GEWFA 120 (171)
Q Consensus 73 iGags~rd~e~~~--~~~~~~t~mdLl~~----~ig~~Eg~vEKkLREt-gEWvv 120 (171)
+|.|.|+|.+.+. ....+.+..+++.+ .-+..+|..| |||+ ++|+.
T Consensus 31 L~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~--lR~aia~~~~ 83 (396)
T d2q7wa1 31 LGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPE--FGRCTQELLF 83 (396)
T ss_dssp SSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHH--HHHHHHHHHH
T ss_pred eeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCcCCHH--HHHHHHHHHH
Confidence 6888888876643 23444444444431 2333566544 5655 56654
No 7
>d1cota_ a.3.1.1 (A:) Cytochrome c2 {Paracoccus denitrificans [TaxId: 266]}
Probab=12.98 E-value=24 Score=23.14 Aligned_cols=9 Identities=44% Similarity=1.154 Sum_probs=7.6
Q ss_pred cccccccccc
Q 030767 3 CLSCCHYITR 12 (171)
Q Consensus 3 cLs~~~~i~k 12 (171)
|.+| |+|..
T Consensus 14 C~~C-H~~~~ 22 (121)
T d1cota_ 14 CKAC-HMIQA 22 (121)
T ss_dssp TTTT-CCEEC
T ss_pred Cccc-CccCC
Confidence 8888 99975
No 8
>d1ogyb_ a.138.1.3 (B:) Periplasmic nitrate reductase subunit NapB {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=12.90 E-value=30 Score=25.02 Aligned_cols=23 Identities=30% Similarity=0.577 Sum_probs=14.1
Q ss_pred cccccccccccccccCCCCCCCCC
Q 030767 2 SCLSCCHYITRASLIDNTTPSSSH 25 (171)
Q Consensus 2 ~cLs~~~~i~k~~lp~n~np~p~~ 25 (171)
-||+| |+-.++--..-+-.|.+|
T Consensus 56 ~Cl~C-H~~~~a~~~~A~~is~tH 78 (127)
T d1ogyb_ 56 RCLEC-HRRQYSGLVAAPMISITH 78 (127)
T ss_dssp GGGGT-SCCCCTTCCCCCCSCGGG
T ss_pred ccccC-cChhhHhhcCCCcCCccc
Confidence 49999 987766544444444444
No 9
>d1vyda_ a.3.1.1 (A:) Cytochrome c2 {Rhodobacter capsulatus [TaxId: 1061]}
Probab=12.53 E-value=25 Score=23.25 Aligned_cols=10 Identities=40% Similarity=0.979 Sum_probs=7.9
Q ss_pred ccccccccccc
Q 030767 2 SCLSCCHYITR 12 (171)
Q Consensus 2 ~cLs~~~~i~k 12 (171)
-|.+| |+|..
T Consensus 12 ~C~~C-H~i~~ 21 (116)
T d1vyda_ 12 KCKTC-HSIIA 21 (116)
T ss_dssp GTTTT-CCEEC
T ss_pred HhHHh-CCCcC
Confidence 38888 99974
No 10
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=12.40 E-value=42 Score=20.70 Aligned_cols=16 Identities=6% Similarity=0.065 Sum_probs=13.6
Q ss_pred CCCchHHHHHHHHhcC
Q 030767 61 SKQHSVMQIERAISAG 76 (171)
Q Consensus 61 ~~qpsv~qieRAiGag 76 (171)
.-.||+.||.+++|..
T Consensus 22 G~~Ps~rei~~~~g~~ 37 (71)
T d1jhfa1 22 GMPPTRAEIAQRLGFR 37 (71)
T ss_dssp SSCCCHHHHHHHTTCS
T ss_pred CCCCCHHHHHHHcCCC
Confidence 4569999999999975
Done!