BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030768
(171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
Length = 92
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 84 KPVSVPKGHLAVYVGQKDGDFHRVLVPVIYFNHPLFGKLLRDAEEEYGFNQ-QGGITIPC 142
K V VPKG+L VYVG K R L+PV Y N P F LL AEEE+G++ GG+TIPC
Sbjct: 21 KSVEVPKGYLVVYVGDK---MRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPC 77
Query: 143 RFSEFEQVQTRI 154
+ EF V + +
Sbjct: 78 KEDEFLTVTSHL 89
>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1
Length = 93
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 84 KPVSVPKGHLAVYVGQKDGDFHRVLVPVIYFNHPLFGKLLRDAEEEYGFNQ-QGGITIPC 142
K V VPKG+ AVYVG K R +PV Y N P F +LL AEEE+G++ GG+TIPC
Sbjct: 22 KRVDVPKGYAAVYVGDK---MRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPC 78
Query: 143 RFSEFEQVQTRI 154
+ EF V +
Sbjct: 79 KEEEFLNVTAHL 90
>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var.
radiata GN=ARG7 PE=2 SV=1
Length = 92
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 84 KPVSVPKGHLAVYVGQKDGDFHRVLVPVIYFNHPLFGKLLRDAEEEYGFNQ-QGGITIPC 142
K + PKG+LAVYVG+ + R ++PV + N PLF LL AEEE+G++ GG+TIPC
Sbjct: 21 KVLDAPKGYLAVYVGE---NMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPC 77
Query: 143 RFSEFEQVQTRIAA 156
F+ + + ++A
Sbjct: 78 SEDLFQHITSCLSA 91
>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1
Length = 82
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 86 VSVPKGHLAVYVGQKDGDFHRVLVPVIYFNHPLFGKLLRDAEEEYGFNQ-QGGITIPCRF 144
V PKG+LAVYVG+K R ++PV Y N P F LL AEEE+G++ GG+TIPC
Sbjct: 15 VDAPKGYLAVYVGEK---MKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSE 71
Query: 145 SEFEQV 150
F+++
Sbjct: 72 EVFQRI 77
>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
Length = 82
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 84 KPVSVPKGHLAVYVGQKDGDFHRVLVPVIYFNHPLFGKLLRDAEEEYGFNQ-QGGITIPC 142
K PKG+LAVYVG+K R ++PV Y N P F LL AEEE+G++ GG+TIPC
Sbjct: 13 KAADAPKGYLAVYVGEK---LKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPC 69
Query: 143 RFSEFEQVQT 152
F+ + +
Sbjct: 70 SEDVFQCITS 79
>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1
Length = 90
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 84 KPVSVPKGHLAVYVGQKDGDFHRVLVPVIYFNHPLFGKLLRDAEEEYGFNQ-QGGITIPC 142
K V V KG+LAVYVG+K R ++PV Y N P F LL AEEE+G++ GG+TIPC
Sbjct: 21 KAVDVEKGYLAVYVGEK---MRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPC 77
Query: 143 RFSEFEQVQT 152
F+ + +
Sbjct: 78 SEDVFQHITS 87
>sp|Q09877|SIF3_SCHPO Sad1-interacting factor 3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=sif3 PE=1 SV=2
Length = 472
Score = 33.5 bits (75), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 70 ASGYVPMDQDPIREKPVSVPKGHLAVYVGQKDGDFHRVLVPVIYFNHPLFGKLLRDAEEE 129
A+ ++P +K V +P+ H +++ ++ +L P +N L RD EE
Sbjct: 80 AAAHIPQRTTKTSQKLVLLPENHAVNSFNEEESNYEDLLTPSDAYNLIKLENLPRDKREE 139
Query: 130 YGFNQQGGITIPCRFSEFEQVQTRIAAGNGARTRK 164
GF + + C + +V+ + + R +K
Sbjct: 140 LGFPRATAYCV-CEAFQLPKVKHFLKHYHKVRAKK 173
>sp|O60522|TDRD6_HUMAN Tudor domain-containing protein 6 OS=Homo sapiens GN=TDRD6 PE=2
SV=2
Length = 2096
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 41 ECKSKPISKLISWGRRLTNGAKSLCL---AKPASGYVPMDQDPIREKPVSVPKGHLAV 95
E K+ +SK +S +TNG+ L + K AS Y P+ Q+ + KP S KG L V
Sbjct: 713 ENKTTSVSKALSDTTVVTNGSTELVVQEKVKRASVYFPLMQNCLEIKPGSSSKGELEV 770
>sp|C6DAI7|DXR_PECCP 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=dxr PE=3
SV=1
Length = 398
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Query: 25 RGGSGYQRLGAPDMSCECKSKPISKLISWGRRLTNGAKSL 64
R GS +LG+PDM PI+ +++ R+T+GAK+L
Sbjct: 263 RDGSVLAQLGSPDMR-----TPIAHAMAYPERVTSGAKAL 297
>sp|O43157|PLXB1_HUMAN Plexin-B1 OS=Homo sapiens GN=PLXNB1 PE=1 SV=3
Length = 2135
Score = 31.6 bits (70), Expect = 2.6, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 37 DMSCECKSKPISKLISWGRRLTNGAKSLCLAKPASGYVPMDQDPIREKP--------VSV 88
D++ +C P+ L ++ S P + VP++ PI E P V++
Sbjct: 359 DVNSDCAQLPVDTLDAYP------CGSDHTPSPMASRVPLEATPILEWPGIQLTAVAVTM 412
Query: 89 PKGHLAVYVGQKDGDFHRVLVPVIYFNHP 117
GH ++G G HRV + HP
Sbjct: 413 EDGHTIAFLGDSQGQLHRVYLGPGSDGHP 441
>sp|P07645|GD_SUHVR Envelope glycoprotein D OS=Suid herpesvirus 1 (strain Rice) PE=3
SV=1
Length = 402
Score = 31.6 bits (70), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 6 GFKIGKRLVRVTRWIIRKTRGGSGYQRLGAPDMSCECKSKP 46
G +G LV V +I + RG GY+ LG P + E K++P
Sbjct: 360 GTAMGALLVGVCVYIFFRLRGAKGYRLLGGPADADELKAQP 400
>sp|O67838|Y2054_AQUAE Uncharacterized protein aq_2054 OS=Aquifex aeolicus (strain VF5)
GN=aq_2054 PE=4 SV=1
Length = 1116
Score = 31.2 bits (69), Expect = 3.7, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 80 PIREKPVSVPKGHLAVYVGQKDGDFHRVLVP-VIYFNHPLFGKLLRDAEEEYGFN 133
PIRE P+++ GHL V+ G +G +RV+V N+ L G+ L + N
Sbjct: 96 PIREIPINLKIGHLDVWTGN-EGGVNRVIVKDASLINNELEGEFLYTNLRSFTLN 149
>sp|O07007|LUTR_BACSU HTH-type transcriptional regulator LutR OS=Bacillus subtilis
(strain 168) GN=lutR PE=1 SV=1
Length = 219
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 8/128 (6%)
Query: 42 CKSKPISKLISWGRRLTNGAKSLCLAKPASGYVPMDQDPIREKPVSVPKGHL------AV 95
K + + +L+ + L G SL K + QD ++E G L A
Sbjct: 71 MKKEDVKQLLEVRKLLEIGVASLAAEKRTEADLERIQDALKEMGSIEADGELGEKADFAF 130
Query: 96 YVGQKDGDFHRVLVPVIYFNHPLFGKLLRDAEEEYGFNQQGGITIPCRFSEFEQVQTRIA 155
++ D + +L ++ L + +R+ + + F+++ ++ + E E++ +A
Sbjct: 131 HLALADASQNELLKHLMNHVSSLLLETMRETRKIWLFSKK--TSVQRLYEEHERIYNAVA 188
Query: 156 AGNGARTR 163
AGNGA+
Sbjct: 189 AGNGAQAE 196
>sp|A9VMC2|UBIE_BACWK Demethylmenaquinone methyltransferase OS=Bacillus
weihenstephanensis (strain KBAB4) GN=ubiE PE=3 SV=1
Length = 237
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 8/44 (18%)
Query: 111 VIYFNH--PLFGKLLRDAEEEYGFNQQGGITIP------CRFSE 146
V+YF + PLFGK+ + +EY + Q+ T P C F E
Sbjct: 167 VLYFKYIMPLFGKMFAKSYKEYSWLQESASTFPGMKELACMFEE 210
>sp|Q6MG48|PRC2A_RAT Protein PRRC2A OS=Rattus norvegicus GN=Prrc2a PE=1 SV=1
Length = 2161
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 61 AKSLCLAKPASGYVPMDQDPIREKPVSVPKGHLA----VYVGQKDGD 103
AKSL KP +G +P +++P++EK +S P ++ + VG +DG+
Sbjct: 1192 AKSLVPKKPPTGPLPPNKEPLKEKLISGPLSPMSRAGNMGVGMEDGE 1238
>sp|Q7TSC1|PRC2A_MOUSE Protein PRRC2A OS=Mus musculus GN=Prrc2a PE=1 SV=1
Length = 2158
Score = 30.0 bits (66), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 61 AKSLCLAKPASGYVPMDQDPIREKPVSVPKGHLA----VYVGQKDGD 103
AKSL KP +G +P ++P++EK +S P ++ + VG +DG+
Sbjct: 1187 AKSLVPKKPPTGPLPPSKEPLKEKLISGPLSPMSRAGNMGVGMEDGE 1233
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,289,816
Number of Sequences: 539616
Number of extensions: 3041305
Number of successful extensions: 4923
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 4899
Number of HSP's gapped (non-prelim): 19
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)