BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030771
(171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q940B0|RL183_ARATH 60S ribosomal protein L18-3 OS=Arabidopsis thaliana GN=RPL18C PE=2
SV=1
Length = 187
Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/136 (86%), Positives = 130/136 (95%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGIDL+AGGKSKK+KRTAPKSDD+YLKLLVKLYRFLVRR++SNFN VILKRLFMSKVNK
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60
Query: 61 PLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECL 120
PLSLSRL+ FM GK+DKIAV+VGT+TDD+R +E+PA+KVTALRFTE ARARIEKAGGECL
Sbjct: 61 PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 121 TFDQLALRAPLGQNTV 136
TFDQLALRAPLGQNTV
Sbjct: 121 TFDQLALRAPLGQNTV 136
>sp|P42791|RL182_ARATH 60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=1
SV=2
Length = 187
Score = 244 bits (622), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/136 (86%), Positives = 128/136 (94%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGIDL+AGGKSKK+KRTAPKSDD+YLKL VKLYRFLVRRT+S FN VILKRLFMSKVNK
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60
Query: 61 PLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECL 120
PLSLSRL+ FM GKEDKIAV+VGT+TDD+R +E+PA+KVTALRFTE ARARIEKAGGECL
Sbjct: 61 PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 121 TFDQLALRAPLGQNTV 136
TFDQLALRAPLGQNTV
Sbjct: 121 TFDQLALRAPLGQNTV 136
>sp|O65729|RL18_CICAR 60S ribosomal protein L18 (Fragment) OS=Cicer arietinum GN=RPL18
PE=2 SV=1
Length = 183
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 119/128 (92%)
Query: 4 DLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLS 63
DL AGGK+KK+KRT+PKS+DIYLKLLVKLYRFLVRRTDSNFN VILKRLFMSKVN+PPLS
Sbjct: 1 DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLS 60
Query: 64 LSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFD 123
LSRLI +M+GKE KI VVVG VTDDIR Y+VP +KVTAL+FTETARARI+KAGGECLTFD
Sbjct: 61 LSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFD 120
Query: 124 QLALRAPL 131
QLALR PL
Sbjct: 121 QLALRLPL 128
>sp|O22254|RL181_ARATH Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana
GN=RPL18A PE=2 SV=3
Length = 188
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/137 (77%), Positives = 119/137 (86%), Gaps = 1/137 (0%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGIDL+AGGKSKK+KRT PKSDD+YLKLLVK R+LVRRT+S FN VILKRLFMSKVNK
Sbjct: 1 MGIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKA 60
Query: 61 PLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECL 120
PLSLSRL+ +M GK+ KIAV+VGTVTDD+R +VPAL VTALRFTE+ARARI KAGGECL
Sbjct: 61 PLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECL 120
Query: 121 TFDQLALRAP-LGQNTV 136
TFDQLAL P +NTV
Sbjct: 121 TFDQLALPCPTWSENTV 137
>sp|P12001|RL18_RAT 60S ribosomal protein L18 OS=Rattus norvegicus GN=Rpl18 PE=2 SV=2
Length = 188
Score = 176 bits (445), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 89/138 (64%), Positives = 109/138 (78%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MG+D + K +K +R PKS DIYL+LLVKLYRFL RRT+S FN+V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLSLSR+I MK G+E+K AVVVGT+TDD+R EVP LKV ALR + AR+RI KAGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRILEVPKLKVCALRVSSRARSRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTV 136
LTFDQLAL +P G+ TV
Sbjct: 120 ILTFDQLALESPKGRGTV 137
>sp|Q90YV0|RL18_ICTPU 60S ribosomal protein L18 OS=Ictalurus punctatus GN=rpl18 PE=2 SV=3
Length = 188
Score = 176 bits (445), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 107/138 (77%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MG+D + K +K RT PKS DIYL+LLVKLYRFL RR+D+ FNKV+LKRLFMSK N+P
Sbjct: 1 MGVD-IRHNKDRKVHRTEPKSQDIYLRLLVKLYRFLARRSDAPFNKVVLKRLFMSKTNRP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PL+LSRLI MK G+E+KIAVVVGT+TDD+R +P LKV ALR T AR RI KAGG+
Sbjct: 60 PLALSRLIRKMKLQGRENKIAVVVGTITDDVRILNIPKLKVCALRVTAGARRRILKAGGQ 119
Query: 119 CLTFDQLALRAPLGQNTV 136
+TFDQLA+ P GQ TV
Sbjct: 120 VMTFDQLAVTTPKGQGTV 137
>sp|P02412|RL18B_XENLA 60S ribosomal protein L18-B OS=Xenopus laevis GN=rpl18-b PE=2 SV=4
Length = 188
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 111/140 (79%), Gaps = 3/140 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + K +K +R PKS DIYL+LLVKLYRFL RRT+S+FN+V+LKRLFMS+ N+P
Sbjct: 1 MGID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLS+SRLI MK G+E+K AVVVG +TDD+R +++P LKV AL+ T R+RI K+GG+
Sbjct: 60 PLSMSRLIRKMKLQGRENKTAVVVGYITDDVRIHDIPKLKVCALKITSGDRSRILKSGGQ 119
Query: 119 CLTFDQLALRAPLGQNTVCV 138
+TFDQLAL AP GQNTV +
Sbjct: 120 IMTFDQLALAAPKGQNTVLL 139
>sp|Q4R5H8|RL18_MACFA 60S ribosomal protein L18 OS=Macaca fascicularis GN=RPL18 PE=2 SV=1
Length = 188
Score = 173 bits (439), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/138 (64%), Positives = 108/138 (78%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MG+D + K +K +R PKS DIYL+LLVKLYRFL RRT+S FN+V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLSLSR+I MK G+E+K AVVVGT+TDD+R EVP LKV ALR T AR+RI +AGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGK 119
Query: 119 CLTFDQLALRAPLGQNTV 136
LTFDQLAL +P G TV
Sbjct: 120 ILTFDQLALDSPKGCGTV 137
>sp|Q07020|RL18_HUMAN 60S ribosomal protein L18 OS=Homo sapiens GN=RPL18 PE=1 SV=2
Length = 188
Score = 173 bits (439), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/138 (64%), Positives = 108/138 (78%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MG+D + K +K +R PKS DIYL+LLVKLYRFL RRT+S FN+V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLSLSR+I MK G+E+K AVVVGT+TDD+R EVP LKV ALR T AR+RI +AGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGK 119
Query: 119 CLTFDQLALRAPLGQNTV 136
LTFDQLAL +P G TV
Sbjct: 120 ILTFDQLALDSPKGCGTV 137
>sp|D0VWQ3|RL18_CANFA Ribosomal protein L18 OS=Canis familiaris GN=RPL18 PE=1 SV=2
Length = 188
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/138 (64%), Positives = 108/138 (78%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MG+D + K +K +R PKS DIYL+LLVKLYRFL RRT+S FN+V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLSLSR+I MK G+E+K AVVVGT+TDD+R EVP LKV ALR + AR+RI KAGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVSSRARSRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTV 136
LTFDQLAL +P G TV
Sbjct: 120 ILTFDQLALDSPKGCGTV 137
>sp|Q5E973|RL18_BOVIN 60S ribosomal protein L18 OS=Bos taurus GN=RPL18 PE=2 SV=3
Length = 188
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/138 (64%), Positives = 107/138 (77%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MG+D + K +K +R PKS DIYL+LLVKLYRFL RRT+S FN+V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLSLSR+I MK G+E K AVVVGT+TDD+R EVP LKV ALR + AR+RI KAGG+
Sbjct: 60 PLSLSRMIRKMKLPGREGKTAVVVGTITDDVRVQEVPKLKVCALRVSSRARSRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTV 136
LTFDQLAL +P G TV
Sbjct: 120 ILTFDQLALDSPKGCGTV 137
>sp|Q0PXY6|RL18_DIACI 60S ribosomal protein L18 OS=Diaphorina citri GN=RpL18 PE=2 SV=1
Length = 188
Score = 171 bits (432), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 110/138 (79%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MG+D + ++ +RT PKS D+YL+LLVKLYRFL RRT+S FNK+ILKRLFMSK+N+P
Sbjct: 1 MGVD-ICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRP 59
Query: 61 PLSLSRLINFMKG--KEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
P+++S+++ FMK +E ++AV+VGT+ DD R + +P L V ALR T+ AR+RI KAGGE
Sbjct: 60 PMAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTVCALRVTDKARSRILKAGGE 119
Query: 119 CLTFDQLALRAPLGQNTV 136
+TFDQLALRAP G+NTV
Sbjct: 120 IITFDQLALRAPTGKNTV 137
>sp|P09897|RL18A_XENLA 60S ribosomal protein L18-A OS=Xenopus laevis GN=rpl18-a PE=2 SV=2
Length = 188
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/138 (62%), Positives = 108/138 (78%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + K +K +R PKS DIYL+LLVKLYRFL RRT+S+FN+V+LKRLFMS+ N+P
Sbjct: 1 MGID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLS+SRLI MK +E+K AVVVG +T D+R +++P L V AL+ T AR+RI KAGG+
Sbjct: 60 PLSMSRLIRKMKLPRRENKTAVVVGCITADVRIHDIPKLTVCALKLTSGARSRILKAGGQ 119
Query: 119 CLTFDQLALRAPLGQNTV 136
+TFDQLAL AP GQNTV
Sbjct: 120 IMTFDQLALAAPKGQNTV 137
>sp|Q962Y8|RL18_SPOFR 60S ribosomal protein L18 OS=Spodoptera frugiperda GN=RpL18 PE=2
SV=1
Length = 183
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 105/140 (75%), Gaps = 3/140 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + +K +RT KS D+YL+LLVKLYR+L RRT+S FN +IL+RLFMS++N+P
Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNSKFNTIILRRLFMSRINRP 59
Query: 61 PLSLSRLINFMKG--KEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLSLSRL MK +E IAVVVGT+T+D+R Y+VP + V AL TE ARARI AGGE
Sbjct: 60 PLSLSRLARHMKKPTREGMIAVVVGTITNDVRLYKVPKMSVAALHVTEKARARILAAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVCV 138
LTFDQLALRAP G TV +
Sbjct: 120 ILTFDQLALRAPTGAKTVLL 139
>sp|Q5UAS1|RL18_BOMMO 60S ribosomal protein L18 OS=Bombyx mori GN=RpL18 PE=2 SV=1
Length = 183
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 107/140 (76%), Gaps = 3/140 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + +K +RT KS DIYL+LLVKLYR+L RRT++ FN+++L+RLFMS++N+P
Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDIYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRP 59
Query: 61 PLSLSRLINFMKG--KEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
P+S+SRL MK +E IAVVVGTVT+D+R Y++P + V AL TE ARARI AGGE
Sbjct: 60 PISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVCV 138
LTFDQLALRAP G+ TV V
Sbjct: 120 ILTFDQLALRAPTGKKTVLV 139
>sp|Q4GXG7|RL18_TIMBA 60S ribosomal protein L18 OS=Timarcha balearica GN=RpL18 PE=2 SV=1
Length = 188
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/138 (61%), Positives = 107/138 (77%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + +K +RT PKS D+YL+LLVKLYR+L RRT + FNK+ILKRLFMSK+ +P
Sbjct: 1 MGID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRYLARRTGAKFNKIILKRLFMSKIYRP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
P+SLS+++ FMK G+E AV+VGTVTDD R +E+P L + ALR T+TARA I KAGGE
Sbjct: 60 PISLSKVVRFMKKPGRELLTAVIVGTVTDDSRIFEIPKLSICALRVTQTARAGILKAGGE 119
Query: 119 CLTFDQLALRAPLGQNTV 136
+TFDQLALR+P G TV
Sbjct: 120 VITFDQLALRSPTGSKTV 137
>sp|Q6F442|RL18_PLUXY 60S ribosomal protein L18 OS=Plutella xylostella GN=RpL18 PE=2 SV=1
Length = 183
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 106/140 (75%), Gaps = 3/140 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + +K +RT KS D+YL+LLVKLYR+L RRT++ FN+++L+RLFMS++N+P
Sbjct: 1 MGID-INHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRP 59
Query: 61 PLSLSRLINFMKG--KEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLSLSRL MK +E IAVVVGT+T+D R Y+VP + V AL TE ARARI AGGE
Sbjct: 60 PLSLSRLARHMKKPTREGLIAVVVGTITNDTRLYKVPKMTVAALHVTEKARARILDAGGE 119
Query: 119 CLTFDQLALRAPLGQNTVCV 138
LTFDQLALRAP G+ TV +
Sbjct: 120 ILTFDQLALRAPTGRKTVLI 139
>sp|Q8TFH1|RL18B_SCHPO 60S ribosomal protein L18-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl18b PE=1 SV=1
Length = 187
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/148 (58%), Positives = 104/148 (70%), Gaps = 5/148 (3%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + +KS+R+ P S+++YLKLLVKLYRFL RRTDS FNK ILKRLF SK N+P
Sbjct: 1 MGID-IERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRP 59
Query: 61 PLSLSRLINFMKGK----EDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAG 116
P+S+S++ K E K V+VGTVTDD R VP L V ALRFT++ARARI KAG
Sbjct: 60 PISISKIAALTSRKSASLEGKTTVIVGTVTDDERLLTVPKLSVAALRFTKSARARILKAG 119
Query: 117 GECLTFDQLALRAPLGQNTVCVFNANYC 144
GE LT DQLALRAP G NTV + +
Sbjct: 120 GEVLTLDQLALRAPTGSNTVLLRGKKHA 147
>sp|Q4PM04|RL18_IXOSC 60S ribosomal protein L18 OS=Ixodes scapularis GN=RpL18 PE=2 SV=1
Length = 188
Score = 164 bits (414), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 109/138 (78%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + +K R PKS+++YL LLVK+YRFL RR+ + FN+++LKRLFMS++NKP
Sbjct: 1 MGID-INHKYDRKVVRRRPKSENVYLGLLVKVYRFLARRSGAKFNRIVLKRLFMSRINKP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
+SL+R+ FMK G+E+ IAVVVGTVTDD+R Y+VP L++ ALR TE ARARI KAGGE
Sbjct: 60 VISLARVTRFMKKPGRENLIAVVVGTVTDDLRLYDVPKLRLCALRVTERARARILKAGGE 119
Query: 119 CLTFDQLALRAPLGQNTV 136
LTFDQLA++AP G+ TV
Sbjct: 120 ILTFDQLAVQAPKGKGTV 137
>sp|Q9VS34|RL18_DROME 60S ribosomal protein L18 OS=Drosophila melanogaster GN=RpL18 PE=1
SV=1
Length = 188
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/138 (61%), Positives = 102/138 (73%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + +K +RT PKS D+YL+LLVKLYRFL RRT+ FN++ILKRLFMSK+N+P
Sbjct: 1 MGID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRP 59
Query: 61 PLSLSRLINFMKG--KEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLSL R+ F K + + VVVGTVTDD R VP L V AL T+TAR RI KAGGE
Sbjct: 60 PLSLQRIARFFKAANQPESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGE 119
Query: 119 CLTFDQLALRAPLGQNTV 136
LTFDQLALR+P G+NT+
Sbjct: 120 VLTFDQLALRSPTGKNTL 137
>sp|A3F4S0|RL18_TAEAS 60S ribosomal protein L18 OS=Taenia asiatica GN=RPL18 PE=2 SV=1
Length = 180
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 103/138 (74%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID+ K K +R PKS D+YL+L+VKLY+FL RRT S FN ++ +RLFMS++N+
Sbjct: 1 MGIDISHRNKRKVVRRN-PKSGDVYLRLMVKLYKFLARRTHSKFNNIVKRRLFMSRINRA 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLSLSRL MK G+E KIAVV+GTVT+DIR EVP L V ALR T AR RI KAGG+
Sbjct: 60 PLSLSRLTRQMKKPGREGKIAVVIGTVTNDIRMREVPKLTVCALRVTAGARTRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTV 136
+T DQLAL+APLG+ TV
Sbjct: 120 VMTVDQLALKAPLGKGTV 137
>sp|Q56FG8|RL18_LYSTE 60S ribosomal protein L18 OS=Lysiphlebus testaceipes GN=RpL18 PE=2
SV=1
Length = 188
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 106/138 (76%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + +K +RT P+S DIYL+LLVK+YRFL RRT+S F+++ILKRLFMS++N P
Sbjct: 1 MGID-INHKYDRKVRRTEPRSQDIYLRLLVKVYRFLARRTNSKFSRIILKRLFMSRINLP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
P+SL+R+ FMK +++ IAVVVGT+TDD R +E+P LKV ALR TE AR RI KAGGE
Sbjct: 60 PISLARVCRFMKKESRKNSIAVVVGTITDDARIFEIPKLKVCALRITEKARGRILKAGGE 119
Query: 119 CLTFDQLALRAPLGQNTV 136
+TF++LA +P G TV
Sbjct: 120 IITFEKLAEISPTGNKTV 137
>sp|P0CX50|RL18B_YEAST 60S ribosomal protein L18-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL18B PE=1 SV=1
Length = 186
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/138 (61%), Positives = 104/138 (75%), Gaps = 2/138 (1%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + + RTAPKSD++YLKLLVKLY FL RRTD+ FNKV+LK LF+SK+N+P
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
P+S+SR+ +K G +K VVVGTVTDD R +E P V ALRFT ARA+I KAGGE
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120
Query: 119 CLTFDQLALRAPLGQNTV 136
C+T DQLA+RAP GQNT+
Sbjct: 121 CITLDQLAVRAPKGQNTL 138
>sp|P0CX49|RL18A_YEAST 60S ribosomal protein L18-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL18A PE=1 SV=1
Length = 186
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/138 (61%), Positives = 104/138 (75%), Gaps = 2/138 (1%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + + RTAPKSD++YLKLLVKLY FL RRTD+ FNKV+LK LF+SK+N+P
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
P+S+SR+ +K G +K VVVGTVTDD R +E P V ALRFT ARA+I KAGGE
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120
Query: 119 CLTFDQLALRAPLGQNTV 136
C+T DQLA+RAP GQNT+
Sbjct: 121 CITLDQLAVRAPKGQNTL 138
>sp|Q10192|RL18A_SCHPO 60S ribosomal protein L18-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl18a PE=1 SV=1
Length = 187
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/148 (59%), Positives = 105/148 (70%), Gaps = 5/148 (3%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + KKS+R+ P S+++YLKLLVKLYRFL RRTDS FNK ILKRLF SK N+P
Sbjct: 1 MGID-IERHHVKKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRP 59
Query: 61 PLSLSRLINFMKGK----EDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAG 116
P+S+S++ K ++K VVVGTVTDD R VP L + ALRFT++ARARI KAG
Sbjct: 60 PISISKIAALTSRKSASSQNKTTVVVGTVTDDERMLTVPKLSIAALRFTKSARARILKAG 119
Query: 117 GECLTFDQLALRAPLGQNTVCVFNANYC 144
GE LT DQLALRAP G NTV V +
Sbjct: 120 GEVLTLDQLALRAPTGSNTVLVRGKKHA 147
>sp|P35980|RL18_MOUSE 60S ribosomal protein L18 OS=Mus musculus GN=Rpl18 PE=2 SV=3
Length = 188
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 110/140 (78%), Gaps = 3/140 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MG+D + K +K +R PKS DIYL+LLVKLYRFL RRT+S FN+V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLSLSR+I MK G+E+K AVVVGTVTDD+R EVP LKV ALR + AR+RI KAGG+
Sbjct: 60 PLSLSRMIRKMKLPGRENKTAVVVGTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGK 119
Query: 119 CLTFDQLALRAPLGQNTVCV 138
LTFDQLAL +P G+ TV +
Sbjct: 120 ILTFDQLALESPKGRGTVLL 139
>sp|Q7QJM5|RL18_ANOGA 60S ribosomal protein L18 OS=Anopheles gambiae GN=RpL18 PE=3 SV=3
Length = 189
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 104/139 (74%), Gaps = 4/139 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + +K +RT PKS D+YL LLVKLYRFL RRT FNK++++RLFMS+ N P
Sbjct: 1 MGID-INHKWDRKVRRTRPKSLDVYLSLLVKLYRFLYRRTKKKFNKIVMRRLFMSRTNHP 59
Query: 61 PLSLSRLINFMK--GKEDK-IAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGG 117
P+SL+R+ + MK GK++K +AVV+GTVT+D+R +VP L V ALR T+ AR RI K GG
Sbjct: 60 PMSLNRVAHLMKLRGKDEKSVAVVIGTVTNDVRMMDVPKLNVCALRVTDKARQRILKNGG 119
Query: 118 ECLTFDQLALRAPLGQNTV 136
+ TFDQLAL +P G+NTV
Sbjct: 120 KIYTFDQLALLSPTGRNTV 138
>sp|Q1HR62|RL18_AEDAE 60S ribosomal protein L18 OS=Aedes aegypti GN=RpL18 PE=2 SV=1
Length = 189
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/139 (61%), Positives = 101/139 (72%), Gaps = 4/139 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + +K +RT PKS D+YL+LLVKLYRFL RRT FNK+IL+RLFMS+ N+P
Sbjct: 1 MGID-INHKWDRKVRRTKPKSLDVYLRLLVKLYRFLYRRTHKKFNKIILRRLFMSRTNQP 59
Query: 61 PLSLSRLINFMK--GK-EDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGG 117
P+SLSR+ MK GK E+ IAVVVGTVT+D R P + V ALR TE AR RI K GG
Sbjct: 60 PISLSRVAKLMKLRGKDENTIAVVVGTVTNDDRKLYCPKMNVCALRVTEKARERILKWGG 119
Query: 118 ECLTFDQLALRAPLGQNTV 136
+ TFDQLAL AP G+NTV
Sbjct: 120 KIYTFDQLALVAPTGKNTV 138
>sp|P69091|RL18_ORENI 60S ribosomal protein L18 OS=Oreochromis niloticus GN=rpl18 PE=2
SV=2
Length = 188
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 109/138 (78%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MG+D + K +K R PKS DIYL+LLVKLYRFL RR+++ FN+V+L+RLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVHRKEPKSQDIYLRLLVKLYRFLARRSNAPFNRVVLRRLFMSRTNRP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
P+++SRLI MK G+E+KIAVVVGTVTDD+R ++P LK+ ALR T+ AR RI KAGG+
Sbjct: 60 PIAVSRLIRKMKLPGRENKIAVVVGTVTDDVRIQDIPKLKICALRVTDGARRRILKAGGQ 119
Query: 119 CLTFDQLALRAPLGQNTV 136
+TFDQLAL +P GQ TV
Sbjct: 120 VMTFDQLALASPKGQGTV 137
>sp|P69090|RL18_OREMO 60S ribosomal protein L18 OS=Oreochromis mossambicus GN=rpl18 PE=3
SV=2
Length = 188
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 109/138 (78%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MG+D + K +K R PKS DIYL+LLVKLYRFL RR+++ FN+V+L+RLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVHRKEPKSQDIYLRLLVKLYRFLARRSNAPFNRVVLRRLFMSRTNRP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
P+++SRLI MK G+E+KIAVVVGTVTDD+R ++P LK+ ALR T+ AR RI KAGG+
Sbjct: 60 PIAVSRLIRKMKLPGRENKIAVVVGTVTDDVRIQDIPKLKICALRVTDGARRRILKAGGQ 119
Query: 119 CLTFDQLALRAPLGQNTV 136
+TFDQLAL +P GQ TV
Sbjct: 120 VMTFDQLALASPKGQGTV 137
>sp|Q4N438|RL18_THEPA 60S ribosomal protein L18 OS=Theileria parva GN=RPL18 PE=3 SV=1
Length = 184
Score = 147 bits (370), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 93/133 (69%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGIDLV G+ KK R A S + YL+LLVKLY+FL RRTD +FNKV+LKRL M + K
Sbjct: 1 MGIDLVKAGRVKKPGRKALVSKNPYLRLLVKLYKFLSRRTDHSFNKVVLKRLLMPRRFKA 60
Query: 61 PLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECL 120
PLSLS+L M+ + D AVVVGTVT+D R VP L V ALR TETAR RI +GGE L
Sbjct: 61 PLSLSKLSKHMEKRPDNTAVVVGTVTNDERMDVVPKLSVCALRVTETARKRILASGGEVL 120
Query: 121 TFDQLALRAPLGQ 133
TFDQL R+P G
Sbjct: 121 TFDQLVARSPTGS 133
>sp|Q60P81|RL18_CAEBR 60S ribosomal protein L18 OS=Caenorhabditis briggsae GN=rpl-18 PE=3
SV=1
Length = 188
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 97/138 (70%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID ++ + ++RTAPKS++ YL+LL KLY FL RRT FN ++LKRL MS+ N+
Sbjct: 1 MGID-ISHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQ 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLSL+++ +K G E K V + TVTDD R YEVP + + AL TE ARARI AGGE
Sbjct: 60 PLSLAKVARVVKQAGNEKKTVVTLSTVTDDARLYEVPKISLAALHVTEGARARILAAGGE 119
Query: 119 CLTFDQLALRAPLGQNTV 136
+T DQLALR+P G+NTV
Sbjct: 120 IITLDQLALRSPKGENTV 137
>sp|P50885|RL18_TRYB2 60S ribosomal protein L18 OS=Trypanosoma brucei brucei (strain
927/4 GUTat10.1) GN=RPL18-A PE=2 SV=1
Length = 193
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 100/144 (69%), Gaps = 8/144 (5%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MG+DL K K+ R S + Y+KLL+KLY+FL +RT+S FNK+I KRL S+ N+
Sbjct: 1 MGVDLTGVQKKKRVVRHHTYSTNPYIKLLIKLYKFLGKRTNSPFNKLIHKRLLKSRNNRA 60
Query: 61 PLSLSRLINFM--------KGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARI 112
P+SLSR+ M KGK+ IAV+VG V DD+R +PAL++ ALRF+++AR RI
Sbjct: 61 PISLSRIAVCMRRRTVWLKKGKKSPIAVIVGDVLDDVRMTRIPALRICALRFSKSARERI 120
Query: 113 EKAGGECLTFDQLALRAPLGQNTV 136
AGGECLTFDQLA+ AP G+NT+
Sbjct: 121 TGAGGECLTFDQLAMMAPTGKNTM 144
>sp|Q2M0G4|RL18_DROPS 60S ribosomal protein L18 OS=Drosophila pseudoobscura pseudoobscura
GN=RpL18 PE=3 SV=2
Length = 189
Score = 143 bits (361), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 101/137 (73%), Gaps = 3/137 (2%)
Query: 2 GIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPP 61
GID + +K +RT PKS D+YL+LLVKLYRFL RRT+ FN++ILKRLFMSK+N+PP
Sbjct: 3 GID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPP 61
Query: 62 LSLSRLINFMKG--KEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGEC 119
LSL R+ F K + + VVVGTVTDD R VP L + AL T+TAR RI KAGGE
Sbjct: 62 LSLQRIARFFKAANQPESTVVVVGTVTDDARLLVVPKLTLCALHVTQTARERILKAGGEV 121
Query: 120 LTFDQLALRAPLGQNTV 136
LTFDQLAL++P G+NT+
Sbjct: 122 LTFDQLALKSPTGKNTL 138
>sp|Q4DZP2|RL18_TRYCC 60S ribosomal protein L18 OS=Trypanosoma cruzi (strain CL Brener)
GN=RPL18 PE=3 SV=1
Length = 193
Score = 143 bits (360), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 99/143 (69%), Gaps = 8/143 (5%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MG+DL K K+ R S + Y+KLL+KLY+FL +RT+S FNK++ +RL S+ N+
Sbjct: 1 MGVDLTGVQKKKRVVRHHTYSTNPYIKLLIKLYKFLAQRTNSAFNKLVHQRLLKSRSNRA 60
Query: 61 PLSLSRLINFMK--------GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARI 112
P+SLSR+ MK GK+ IAV+VG V DD+R +PAL+V ALRF+++AR RI
Sbjct: 61 PISLSRIAVCMKRKSVWLEKGKKAPIAVIVGDVLDDVRMARIPALRVCALRFSKSARERI 120
Query: 113 EKAGGECLTFDQLALRAPLGQNT 135
AGGECLTFDQLA+ AP G+NT
Sbjct: 121 TGAGGECLTFDQLAMVAPTGKNT 143
>sp|Q4UFD5|RL18_THEAN 60S ribosomal protein L18 OS=Theileria annulata GN=RPL18 PE=3 SV=2
Length = 184
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 92/132 (69%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGIDLV G+ KK R A S + YL+LLVKL++FL RRTD FNK++LKRL M + K
Sbjct: 1 MGIDLVKAGRVKKPGRKALVSKNPYLRLLVKLFKFLARRTDFPFNKIVLKRLLMPRRYKA 60
Query: 61 PLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECL 120
PLSLS+L M+ + + AVV+GTVT D R VP L V ALR TETAR RI +GGE L
Sbjct: 61 PLSLSKLSKHMESRPNNTAVVIGTVTSDERMDVVPKLSVCALRVTETARKRILASGGEVL 120
Query: 121 TFDQLALRAPLG 132
TFDQL R+P+G
Sbjct: 121 TFDQLVARSPIG 132
>sp|O45946|RL18_CAEEL 60S ribosomal protein L18 OS=Caenorhabditis elegans GN=rpl-18 PE=3
SV=1
Length = 188
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 96/138 (69%), Gaps = 3/138 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MGID + + ++RTAPKS++ YL+LL KLY FL RRT FN ++LKRL MS+ N+
Sbjct: 1 MGID-INHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQ 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLSL++L ++ G E+K V + TVTDD R Y VP + V AL TE ARARI AGGE
Sbjct: 60 PLSLAKLARAVQKAGNENKTVVTLSTVTDDARLYTVPKISVAALHVTEGARARILAAGGE 119
Query: 119 CLTFDQLALRAPLGQNTV 136
+T DQLAL++P G+NTV
Sbjct: 120 IITLDQLALKSPKGENTV 137
>sp|Q54VZ4|RL18_DICDI 60S ribosomal protein L18 OS=Dictyostelium discoideum GN=rpl18 PE=1
SV=1
Length = 181
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
Query: 12 KKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFM 71
+K+ R S + Y LLVKLYRFL RRT+S FNKV+LKRL +K N+PP+S+SR+ N M
Sbjct: 11 RKTGRKTLVSQNPYHALLVKLYRFLARRTNSKFNKVVLKRLLQTKTNRPPVSISRIANLM 70
Query: 72 KG-KEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAP 130
K K KIAV VGTV DD R + P L V ALRFTETAR+RI KAGG+ L+FDQ AL P
Sbjct: 71 KDRKSGKIAVCVGTVVDDERLLDCPKLTVCALRFTETARSRIVKAGGKALSFDQFALVRP 130
Query: 131 LGQNTVCV 138
G NT +
Sbjct: 131 RGNNTFLI 138
>sp|P0DJ17|RL18_TETTH 60S ribosomal protein L18 OS=Tetrahymena thermophila GN=RPL18 PE=1
SV=1
Length = 181
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 97/136 (71%), Gaps = 2/136 (1%)
Query: 1 MGIDLVAGGKS-KKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNK 59
M IDL G+ K+S KS ++Y KLL+KLY+FLVRRTDS FN+ ILKRL S++NK
Sbjct: 1 MAIDLHKQGRVVKRSVVRQTKSTNVYHKLLIKLYKFLVRRTDSKFNQNILKRLSSSRLNK 60
Query: 60 PPLSLSRLI-NFMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGE 118
PLSLSR++ N + ++++ V TVT+D R VP L V AL+FTETAR RI AGG+
Sbjct: 61 FPLSLSRIVKNLNETNKEQVIVSTSTVTNDERLLTVPKLTVCALKFTETARKRILAAGGK 120
Query: 119 CLTFDQLALRAPLGQN 134
CLTFDQLAL+AP G N
Sbjct: 121 CLTFDQLALKAPTGTN 136
>sp|Q95342|RL18_PIG 60S ribosomal protein L18 (Fragment) OS=Sus scrofa GN=RPL18 PE=3
SV=3
Length = 104
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/105 (63%), Positives = 81/105 (77%), Gaps = 3/105 (2%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKP 60
MG+D + K +K +R PKS DIYL+LLVKL RFL RRT+S FN+V+LKRLFMS+ N+P
Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLXRFLARRTNSTFNQVVLKRLFMSRTNRP 59
Query: 61 PLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALR 103
PLSLSR+ MK G+E K AVVVGT+TDD+R EVP LKV ALR
Sbjct: 60 PLSLSRMXRKMKLPGREGKTAVVVGTITDDVRFQEVPKLKVCALR 104
>sp|Q4QG98|RL18_LEIMA 60S ribosomal protein L18 OS=Leishmania major GN=RPL18-A PE=3 SV=1
Length = 198
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 98/145 (67%), Gaps = 12/145 (8%)
Query: 1 MGIDLVAGGKSKKSK--RTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVN 58
MG+DL G SKKS+ R S + Y+KLL+KLY+FL +RT S FNKV+ +RL S+ N
Sbjct: 1 MGVDLT--GISKKSRVIRHHTYSTNPYIKLLIKLYKFLAKRTSSGFNKVVYQRLIKSRSN 58
Query: 59 KPPLSLSRLINFMK--------GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARA 110
+ P+SLSR+ MK K IAVVVG V DD+R +PA++V ALRF+++AR
Sbjct: 59 RAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRMARIPAMRVCALRFSKSARQ 118
Query: 111 RIEKAGGECLTFDQLALRAPLGQNT 135
I AGGECLTFDQLA+ AP G+NT
Sbjct: 119 SIVAAGGECLTFDQLAMIAPTGKNT 143
>sp|P24558|RL18_SALSA 60S ribosomal protein L18 OS=Salmo salar GN=rpl18 PE=2 SV=1
Length = 179
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 93/139 (66%), Gaps = 7/139 (5%)
Query: 1 MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRR-TDSNFNKVILKRLFMSKVNK 59
MGI ++ K + + P S+DI L LVK+YR + + + FNKV+L+RLFMS+ ++
Sbjct: 1 MGI-VIQHNKDRLVRPKQPLSEDITL--LVKIYRLPGSKCSTAPFNKVVLRRLFMSRTHR 57
Query: 60 PPLSLSRLINFMK--GKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGG 117
PP+S+SR+I MK G+E++ AVVVGTVTDD+R +E+P LKV+AL+ T R RI K
Sbjct: 58 PPMSVSRMIRKMKLPGRENRTAVVVGTVTDDVRIHEIPNLKVSALKITRRNRTRILKF-V 116
Query: 118 ECLTFDQLALRAPLGQNTV 136
+ + F LAL AP Q +V
Sbjct: 117 QIMRFVGLALAAPNRQKSV 135
>sp|Q9V197|RL18E_PYRAB 50S ribosomal protein L18e OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl18e PE=3 SV=1
Length = 120
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 16/129 (12%)
Query: 15 KRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKV-----ILKRLFMSKVNKPPLSLSRLIN 69
KRT P + L +L R+L R SN KV I RL + + +++SR+
Sbjct: 2 KRTGPTDPN-----LRRLIRYL--RKKSNEEKVKIWKDIAWRLERPRRQRAEVNVSRINR 54
Query: 70 FMKGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRA 129
+ K+ + VV G+V + + + V A +F+ETAR +IE+AGGE +T ++L R
Sbjct: 55 Y--AKDGDMIVVPGSVLGAGKIEK--KVIVAAWKFSETARRKIEEAGGEAITIEELIKRN 110
Query: 130 PLGQNTVCV 138
P G + +
Sbjct: 111 PKGSGVIIM 119
>sp|Q5JJF5|RL18E_PYRKO 50S ribosomal protein L18e OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl18e PE=3 SV=1
Length = 121
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 15 KRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKGK 74
KRT P DI L+ L++ R K I RL + + +++S++ + K
Sbjct: 3 KRTGP--TDINLRRLIRTLRKKSNEEGVKIWKDIAWRLERPRRQRAEVNISKINRYTK-- 58
Query: 75 EDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQN 134
E + +V G+V R + V A +F+E AR +I +AGGE ++ ++L R P G
Sbjct: 59 EGDVVIVPGSVLGAGRLEH--KVVVAAWKFSEAARRKIIEAGGEAISIEELMERNPKGSG 116
Query: 135 TVCV 138
+ +
Sbjct: 117 VIIM 120
>sp|B6YSQ4|RL18E_THEON 50S ribosomal protein L18e OS=Thermococcus onnurineus (strain NA1)
GN=rpl18e PE=3 SV=1
Length = 120
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 12/127 (9%)
Query: 15 KRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKV---ILKRLFMSKVNKPPLSLSRLINFM 71
KRT P DI L+ L+ R+L ++++ K+ I RL + + +++S++ +
Sbjct: 2 KRTGP--TDINLRRLI---RYLRKKSNEEGVKIWKDIAWRLERPRRQRAEVNVSKINRYT 56
Query: 72 KGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL 131
K E +V G+V + + V A +F+ETA+ +I +AGGE +T ++L R P
Sbjct: 57 K--EGDTVIVPGSVLGAGKLEH--KVVVAAWKFSETAKKKITEAGGEAITIEELIERNPK 112
Query: 132 GQNTVCV 138
G + +
Sbjct: 113 GSGVIIM 119
>sp|O26145|RL18E_METTH 50S ribosomal protein L18e OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl18e PE=3 SV=1
Length = 121
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 13/112 (11%)
Query: 29 LVKLYRFLVRRTDSN---FNKVILKRLFMSKVNKPPLSLSRLINFMKGKEDKIAV---VV 82
L+KL R L +++ K + +RL N+ +++S+ IN +++ + V V+
Sbjct: 12 LIKLIRNLRKKSSQEGAAIWKDVARRLERPTRNRAAVNISK-INRHSDEDETVLVPGKVL 70
Query: 83 GTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQN 134
G+ D R ++V AL F++TAR +IE+AGGECLT ++ P +N
Sbjct: 71 GSGNLDHR------VQVVALSFSQTARDKIERAGGECLTLGKIVEENPAIKN 116
>sp|O59302|RL18E_PYRHO 50S ribosomal protein L18e OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl18e PE=3 SV=1
Length = 120
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 12/127 (9%)
Query: 15 KRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKV---ILKRLFMSKVNKPPLSLSRLINFM 71
KRT P + L +L RFL ++++ K+ + RL + + +++S++ +
Sbjct: 2 KRTGPTDPN-----LRRLIRFLKKKSNEEGVKIWKDLAWRLERPRRQRAEVNVSKINRY- 55
Query: 72 KGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL 131
K+ + VV G+V + + + V A +F+ETAR +I +AGGE +T ++L R P
Sbjct: 56 -AKDGDMIVVPGSVLGAGKLEK--KVIVAAWKFSETARKKITEAGGEAITIEELIERNPK 112
Query: 132 GQNTVCV 138
G + +
Sbjct: 113 GSGVIIM 119
>sp|Q8TVB7|RL18E_METKA 50S ribosomal protein L18e OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl18e PE=3 SV=1
Length = 127
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 74 KEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLG 132
+E++ +V G V D L+V A RF+ TAR +IE AGGECLT +L P G
Sbjct: 64 QEEETVLVPGKVLGD--GVITQPLRVAAWRFSRTARMKIEAAGGECLTIRELLEENPEG 120
>sp|B1ZND0|RL15_OPITP 50S ribosomal protein L15 OS=Opitutus terrae (strain DSM 11246 /
PB90-1) GN=rplO PE=3 SV=1
Length = 148
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 25/26 (96%)
Query: 96 ALKVTALRFTETARARIEKAGGECLT 121
ALKVTA++F+E+A+A+IEKAGG+ +T
Sbjct: 122 ALKVTAVKFSESAKAKIEKAGGQAIT 147
>sp|Q8U0E5|RL18E_PYRFU 50S ribosomal protein L18e OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl18e PE=1 SV=1
Length = 120
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 12/121 (9%)
Query: 15 KRTAPKSDDIYLKLLVKLYRFLVRRTDSNFNKV---ILKRLFMSKVNKPPLSLSRLINFM 71
KRT P + L +L R+L ++++ K+ + RL + + +++S++ +
Sbjct: 2 KRTGPTDPN-----LRRLIRYLRKKSNEYGVKIWKDVAWRLERPRRQRAEVNVSKINRYA 56
Query: 72 KGKEDKIAVVVGTVTDDIRAYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL 131
E + VV G+V + + + V A +F+ETAR +I +AGGE +T ++L R P
Sbjct: 57 NDGE--MIVVPGSVLGAGKLEK--KVIVAAWKFSETARRKIIEAGGEAITIEELIERNPT 112
Query: 132 G 132
G
Sbjct: 113 G 113
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.140 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,790,421
Number of Sequences: 539616
Number of extensions: 1990212
Number of successful extensions: 6621
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 6510
Number of HSP's gapped (non-prelim): 101
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)