Query 030771
Match_columns 171
No_of_seqs 147 out of 977
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 06:23:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030771.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030771hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vqoo1 c.12.1.1 (O:1-115) Rib 100.0 1.5E-40 1.1E-44 252.3 13.1 114 21-139 2-115 (115)
2 d2zjri1 c.12.1.1 (I:4-144) Rib 99.6 1.5E-17 1.1E-21 127.6 -4.0 81 40-122 49-140 (141)
3 d2j01p1 c.12.1.1 (P:5-150) Rib 99.5 2E-16 1.4E-20 121.6 -5.9 80 41-123 51-145 (146)
4 d1vqol1 c.12.1.1 (L:1-150) Rib 99.4 7.4E-15 5.4E-19 112.1 1.9 81 42-124 40-145 (150)
5 d2gycj1 c.12.1.1 (J:4-143) Rib 99.4 4E-16 2.9E-20 118.9 -9.7 80 39-120 49-140 (140)
6 d1l9xa_ c.23.16.1 (A:) gamma-g 34.1 6.9 0.0005 30.1 1.4 38 104-141 26-69 (288)
7 d2zgwa1 b.34.1.1 (A:189-235) B 32.9 7 0.00051 23.2 1.0 12 81-92 2-13 (47)
8 d1wl8a1 c.23.16.1 (A:1-188) GM 32.1 21 0.0015 24.8 3.8 65 103-170 11-85 (188)
9 d2hpua1 d.357.1.1 (A:35-160) N 26.4 14 0.001 25.9 1.9 28 98-125 79-106 (126)
10 d1b33n_ d.30.1.1 (N:) Allophyc 26.3 12 0.0009 23.8 1.4 15 108-122 39-53 (67)
11 d1s98a_ b.124.1.1 (A:) Fe-S sc 25.2 32 0.0023 22.1 3.5 27 102-138 2-28 (97)
12 d1elka_ a.118.9.2 (A:) Tom1 pr 24.0 12 0.00085 26.6 1.0 36 20-55 60-96 (153)
13 d2raqa1 d.58.61.1 (A:3-95) Unc 23.7 12 0.00085 25.5 0.9 32 95-126 49-81 (93)
14 d1ctfa_ d.45.1.1 (A:) Ribosoma 22.9 29 0.0021 22.0 2.8 15 106-120 52-66 (68)
15 d1ujka_ a.118.9.2 (A:) ADP-rib 22.5 11 0.0008 26.6 0.6 40 16-55 51-91 (145)
16 d2cora1 g.39.1.3 (A:43-73) Pin 22.3 7.1 0.00052 21.5 -0.4 13 135-147 13-25 (31)
17 d1dd3a2 d.45.1.1 (A:58-128) Ri 21.0 33 0.0024 21.9 2.7 15 106-120 55-69 (71)
18 d1qdlb_ c.23.16.1 (B:) Anthran 20.0 52 0.0038 22.8 4.1 66 103-170 12-90 (195)
No 1
>d1vqoo1 c.12.1.1 (O:1-115) Ribosomal protein L18e {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=100.00 E-value=1.5e-40 Score=252.35 Aligned_cols=114 Identities=20% Similarity=0.285 Sum_probs=110.3
Q ss_pred CCCHHHHHHHHHHHHhhhccCChHHHHHHHhhhcCCCCCCccchHHHHhhhccCCCcEEEEEeeecCCceeecccCeEEE
Q 030771 21 SDDIYLKLLVKLYRFLVRRTDSNFNKVILKRLFMSKVNKPPLSLSRLINFMKGKEDKIAVVVGTVTDDIRAYEVPALKVT 100 (171)
Q Consensus 21 stN~~L~~Li~~lk~~ar~t~~pl~rrI~KRlf~~r~~~~~VNLs~L~~~~~~~e~k~vvv~~KVLg~G~lt~v~kl~V~ 100 (171)
+|||||+.||++|+++||++++|||++|++||++|+++|++|||++|+++++ +++++++||||||+|+++ ++++|+
T Consensus 2 kTNp~l~~lI~~lk~~sr~~~a~iwk~va~rL~~~rr~r~~VnLski~~~~k--~~~~vvvpgKVLg~G~l~--~k~~V~ 77 (115)
T d1vqoo1 2 KTNPRLSSLIADLKSAARSSGGAVWGDVAERLEKPRRTHAEVNLGRIERYAQ--EDETVVVPGKVLGSGVLQ--KDVTVA 77 (115)
T ss_dssp CCCHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHSCGGGSEEEEHHHHHHHCC--TTSEEEEEEEEECCSCCC--SCCEEE
T ss_pred CCCHHHHHHHHHHHHHHhhhcCHHHHHHHHHHhcccccCCCccHHHHHHhcc--CCCEEEEeeEEecccEEc--CCEEEE
Confidence 6899999999999999999999999999999999999999999999999987 789999999999999999 999999
Q ss_pred EEecCHHHHHHHHHhCCEEEeHHHHHHhCCCCCcEEEee
Q 030771 101 ALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVCVF 139 (171)
Q Consensus 101 A~kfS~sAreKIekAGGkv~~ldqL~~~~P~G~~v~ll~ 139 (171)
|++||++|++|||+||| +++++||++.||+|+||+||+
T Consensus 78 A~~fS~sA~~kI~~aGg-~iti~el~~~nP~G~~v~ilr 115 (115)
T d1vqoo1 78 AVDFSGTAETKIDQVGE-AVSLEQAIENNPEGSHVRVIR 115 (115)
T ss_dssp EEEECHHHHHHHHHHSE-EEEHHHHHHHCTTCCSEEECC
T ss_pred EeecCHHHHHHHHHcCC-EEEHHHHHHHCCCCCCeEEeC
Confidence 99999999999999975 889999999999999999985
No 2
>d2zjri1 c.12.1.1 (I:4-144) Ribosomal protein L15 (L15p) {Deinococcus radiodurans [TaxId: 1299]}
Probab=99.57 E-value=1.5e-17 Score=127.58 Aligned_cols=81 Identities=17% Similarity=0.091 Sum_probs=67.5
Q ss_pred cCChHHHHHHHhhhcC-CCCCCccchHHHHhhhccC-CCcEE---------EEEeeecCCceeecccCeEEEEEecCHHH
Q 030771 40 TDSNFNKVILKRLFMS-KVNKPPLSLSRLINFMKGK-EDKIA---------VVVGTVTDDIRAYEVPALKVTALRFTETA 108 (171)
Q Consensus 40 t~~pl~rrI~KRlf~~-r~~~~~VNLs~L~~~~~~~-e~k~v---------vv~~KVLg~G~lt~v~kl~V~A~kfS~sA 108 (171)
-.+|||+++|||+|++ +++|.+|||++|+.+.+.. +.+.+ ...+||||+|+++ .+++|.|++||++|
T Consensus 49 GQ~Pl~rrlPKrGf~~~~~~~~~inl~~l~~~~~~~i~~~~L~~~~li~~~~~~VKiLg~Gel~--~kl~I~v~~~S~sA 126 (141)
T d2zjri1 49 GRSRLIARLPKRGFNNVGTTYEVVKLSQLQDLEDTTFDRDTLEAYRLVRRKNRPVKLLASGEIS--RAVTVHVDAASAAA 126 (141)
T ss_dssp CSSSSTTTSCCCCCCCCCCCCCEECHHHHTTSCCCCCCTTTTHHHHHCCCCSSCCEECCCCCCC--CCCCCCCSEECHHH
T ss_pred ccccceecCCccCCCcccceEEEEEhhhhhcccccchhhhhhhhhceeccCCCCeEEccCCccc--CCEEEEEEEeCHHH
Confidence 5679999999999998 6789999999998765421 11111 1368999999999 99999999999999
Q ss_pred HHHHHHhCCEEEeH
Q 030771 109 RARIEKAGGECLTF 122 (171)
Q Consensus 109 reKIekAGGkv~~l 122 (171)
+++||+|||+|+.+
T Consensus 127 ~~~IE~aGG~V~l~ 140 (141)
T d2zjri1 127 IKAVEAAGGRVVLP 140 (141)
T ss_dssp HHHHGGGSCCCCCC
T ss_pred HHHHHHCCCEEEee
Confidence 99999999999754
No 3
>d2j01p1 c.12.1.1 (P:5-150) Ribosomal protein L15 (L15p) {Thermus thermophilus [TaxId: 274]}
Probab=99.46 E-value=2e-16 Score=121.60 Aligned_cols=80 Identities=21% Similarity=0.199 Sum_probs=63.2
Q ss_pred CChHHHHHHHhhhcCC-------CCCCccchHHHHhhhccCCC------cEE--EEEeeecCCceeecccCeEEEEEecC
Q 030771 41 DSNFNKVILKRLFMSK-------VNKPPLSLSRLINFMKGKED------KIA--VVVGTVTDDIRAYEVPALKVTALRFT 105 (171)
Q Consensus 41 ~~pl~rrI~KRlf~~r-------~~~~~VNLs~L~~~~~~~e~------k~v--vv~~KVLg~G~lt~v~kl~V~A~kfS 105 (171)
.+|||+|+|||+|++. .++.+|||++|+++...... ..+ ...+||||+|++ ++++|.|++||
T Consensus 51 Q~Pl~rrlPK~Gf~~~~~~~~~~~~~~~inl~~l~~~~~~~~~~~l~~~glik~~~~vKvLg~Ge~---k~i~I~v~~~S 127 (146)
T d2j01p1 51 RSTTLMRLPKRGMQGQVPGEIKRPRYQGVNLKDLARFEGEVTPELLVRAGLLKKGYRLKILGEGEA---KPLKVVAHAFS 127 (146)
T ss_dssp SCTTCCSCCCCCSCCCSSCSCCCCCEEEEETTTTTTSCSCCCTTTTTTSSSCSSCCEEEEECSSCC---CSSCCCCSBCC
T ss_pred CCCceeccchhhhhcccccceeeEEeehhhhhhhhhcccchhhHHHHHhCccccCceEEEecCCce---EeEEEEEEEeC
Confidence 5799999999999973 55678999999766432111 111 125899999995 48999999999
Q ss_pred HHHHHHHHHhCCEEEeHH
Q 030771 106 ETARARIEKAGGECLTFD 123 (171)
Q Consensus 106 ~sAreKIekAGGkv~~ld 123 (171)
++|+|+||+|||+|+.++
T Consensus 128 ksA~ekIEkaGG~v~il~ 145 (146)
T d2j01p1 128 KSALEKLKAAGGEPVLLE 145 (146)
T ss_dssp HHHHHHHHTSCCCCCCCC
T ss_pred HHHHHHHHHcCCEEEEee
Confidence 999999999999998764
No 4
>d1vqol1 c.12.1.1 (L:1-150) Ribosomal protein L15 (L15p) {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=99.45 E-value=7.4e-15 Score=112.12 Aligned_cols=81 Identities=20% Similarity=0.108 Sum_probs=64.0
Q ss_pred ChHHHHHHHhhhcC----CCCCCccchHHHHhhhccC--------CCcEEE-------------EEeeecCCceeecccC
Q 030771 42 SNFNKVILKRLFMS----KVNKPPLSLSRLINFMKGK--------EDKIAV-------------VVGTVTDDIRAYEVPA 96 (171)
Q Consensus 42 ~pl~rrI~KRlf~~----r~~~~~VNLs~L~~~~~~~--------e~k~vv-------------v~~KVLg~G~lt~v~k 96 (171)
.+.|+++|||+|.+ +.++.++|+++|+.+.+.. ++.+.. .++||||+|+++ .+
T Consensus 40 f~g~~~lpK~g~~~~~~~~~~~~~inl~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vKlLG~G~l~--~~ 117 (150)
T d1vqol1 40 FHNHEPLGKSGFKRPQKVQEEAATIDVREIDENVTLLAADDVAEVEDGGFRVDVRDVVEEADDADYVKVLGAGQVR--HE 117 (150)
T ss_dssp CTTSCCSSCCCCCCCGGGCCCEEEEEHHHHHHTTTTCTTSCCCC-----CEEEGGGTCTTCSSSSEEEEECCSCCC--SC
T ss_pred CcCCccCCccCccccccccceeeeccHHHHHHHHhhhccccccccccchhhHHHHhhccccccccceEEecCCccC--cC
Confidence 45567788888865 5788999999998876521 111111 258999999999 99
Q ss_pred eEEEEEecCHHHHHHHHHhCCEEEeHHH
Q 030771 97 LKVTALRFTETARARIEKAGGECLTFDQ 124 (171)
Q Consensus 97 l~V~A~kfS~sAreKIekAGGkv~~ldq 124 (171)
++|.|+.||++|+|+||+|||+|+.++.
T Consensus 118 l~Ika~~~S~sA~ekIe~aGG~v~l~~~ 145 (150)
T d1vqol1 118 LTLIADDFSEGAREKVEGAGGSVELTDL 145 (150)
T ss_dssp CEEEESEECHHHHHHHHHTTCEEEECST
T ss_pred EEEEEEEcCHHHHHHHHHcCCEEEEeec
Confidence 9999999999999999999999988764
No 5
>d2gycj1 c.12.1.1 (J:4-143) Ribosomal protein L15 (L15p) {Escherichia coli [TaxId: 562]}
Probab=99.37 E-value=4e-16 Score=118.85 Aligned_cols=80 Identities=26% Similarity=0.245 Sum_probs=64.8
Q ss_pred ccCChHHHHHHHhhhcC--CCCCCccchHHHHhhhccC-------CCcEE---EEEeeecCCceeecccCeEEEEEecCH
Q 030771 39 RTDSNFNKVILKRLFMS--KVNKPPLSLSRLINFMKGK-------EDKIA---VVVGTVTDDIRAYEVPALKVTALRFTE 106 (171)
Q Consensus 39 ~t~~pl~rrI~KRlf~~--r~~~~~VNLs~L~~~~~~~-------e~k~v---vv~~KVLg~G~lt~v~kl~V~A~kfS~ 106 (171)
--..|||+++|||+|.+ +..+.++||.+|+....+. +..++ ...+||||+|+|+ .|++|.|++||+
T Consensus 49 GGQ~Pl~rr~PK~Gf~~~~~~~~~~i~l~~l~~~~~~~i~~~~L~~~gli~~~~~~vKiLg~Gel~--~ki~i~~~~~S~ 126 (140)
T d2gycj1 49 GGQMPLYRRLPKFGFTSRKAAITAEIRLSDLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVT--TPVTVRGLRVTK 126 (140)
T ss_dssp SSCSSSSSSSSSCCCCCCCCCCCCCBCCSSSSSSSSCSCCSTTSCTTTTCCCSSCCCBCCCSCCCC--CCCCCCCSCCCT
T ss_pred CCcccceeeCceeeccccccceeeeEEeeeehhcccccccHHHHhhcCeeeccceeeEEeccCccc--CCEEEEEEEeCH
Confidence 35679999999999997 4678899999997653211 11111 1368999999999 999999999999
Q ss_pred HHHHHHHHhCCEEE
Q 030771 107 TARARIEKAGGECL 120 (171)
Q Consensus 107 sAreKIekAGGkv~ 120 (171)
+|+++||+|||+|+
T Consensus 127 sA~~~IE~aGG~Ve 140 (140)
T d2gycj1 127 GARAAIEAAGGKIE 140 (140)
T ss_dssp TTSSSSSSSCCCCC
T ss_pred HHHHHHHHcCCccC
Confidence 99999999999973
No 6
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.07 E-value=6.9 Score=30.07 Aligned_cols=38 Identities=8% Similarity=0.034 Sum_probs=24.0
Q ss_pred cCHHHHHHHHHhCCEEEeH------HHHHHhCCCCCcEEEeecC
Q 030771 104 FTETARARIEKAGGECLTF------DQLALRAPLGQNTVCVFNA 141 (171)
Q Consensus 104 fS~sAreKIekAGGkv~~l------dqL~~~~P~G~~v~ll~g~ 141 (171)
+.++-.+.||+|||.++.+ +++...-..-+++.|-.|+
T Consensus 26 i~~sYvk~ie~aGa~vvpi~~~~~~~~~~~~l~~idGillpGG~ 69 (288)
T d1l9xa_ 26 IAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGS 69 (288)
T ss_dssp EEHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHHSSEEEECCCC
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHhhcCCeEecCCC
Confidence 5667789999999998754 2332222234566666554
No 7
>d2zgwa1 b.34.1.1 (A:189-235) Biotin--[acetyl-CoA-carboxylase] ligase C-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=32.88 E-value=7 Score=23.22 Aligned_cols=12 Identities=17% Similarity=-0.133 Sum_probs=10.3
Q ss_pred EEeeecCCceee
Q 030771 81 VVGTVTDDIRAY 92 (171)
Q Consensus 81 v~~KVLg~G~lt 92 (171)
+++||||||++.
T Consensus 2 v~vkil~dg~~e 13 (47)
T d2zgwa1 2 VRVKILGDGSFE 13 (47)
T ss_dssp SEEEEESSSEEE
T ss_pred CcEEEecCCcee
Confidence 468999999986
No 8
>d1wl8a1 c.23.16.1 (A:1-188) GMP synthase subunit A, GuaAA {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=32.09 E-value=21 Score=24.79 Aligned_cols=65 Identities=14% Similarity=0.067 Sum_probs=43.2
Q ss_pred ecCHHHHHHHHHhCCEEEe------HHHHHHhCCCCCcEEEeecCC---CchhHHH-HHHhhhcchhhHHHhhhhhhc
Q 030771 103 RFTETARARIEKAGGECLT------FDQLALRAPLGQNTVCVFNAN---YCLPIML-LIITFAADFTWLCIILTMQVM 170 (171)
Q Consensus 103 kfS~sAreKIekAGGkv~~------ldqL~~~~P~G~~v~ll~g~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 170 (171)
+||.+-...+++.|.++.. ++++-..+|+| + ++.|.. .+-...- +.-.+..+.--|.|-|.||.|
T Consensus 11 ~~~~~i~~~L~~~G~~~~v~~~~~~~~~~~~~~~~g--v-ilsgg~~~~~~~~~~~~i~~~~~~~~PiLGIClG~Q~l 85 (188)
T d1wl8a1 11 QYVHRIWRTLRYLGVETKIIPNTTPLEEIKAMNPKG--I-IFSGGPSLENTGNCEKVLEHYDEFNVPILGICLGHQLI 85 (188)
T ss_dssp TTHHHHHHHHHHTTCEEEEEETTCCHHHHHHTCCSE--E-EECCCSCTTCCTTHHHHHHTGGGTCSCEEEETHHHHHH
T ss_pred cHHHHHHHHHHHCCCeEEEEeCCCCHHHHhhhccce--e-eeccCcccccccccccccccccccccceeehhhhhhhh
Confidence 4678888999999998864 67787777765 4 454443 2322222 223345567778888999975
No 9
>d2hpua1 d.357.1.1 (A:35-160) NosL {Achromobacter cycloclastes [TaxId: 223]}
Probab=26.40 E-value=14 Score=25.86 Aligned_cols=28 Identities=18% Similarity=0.344 Sum_probs=23.8
Q ss_pred EEEEEecCHHHHHHHHHhCCEEEeHHHH
Q 030771 98 KVTALRFTETARARIEKAGGECLTFDQL 125 (171)
Q Consensus 98 ~V~A~kfS~sAreKIekAGGkv~~ldqL 125 (171)
.+.++.=-+.|++-.++.||++++++|+
T Consensus 79 ~l~~F~~~~dA~~F~~~~GG~v~~f~ei 106 (126)
T d2hpua1 79 EAVPFSSRDEAAAFVLAEGGQVLALADI 106 (126)
T ss_dssp CEEEESCHHHHHHHHHHTEEEEEEGGGC
T ss_pred cccCcCCHHHHHHHHHHhCCEEeeHHHC
Confidence 3567777788899999999999999996
No 10
>d1b33n_ d.30.1.1 (N:) Allophycocyanin linker chain (domain) {Mastigocladus laminosus [TaxId: 83541]}
Probab=26.27 E-value=12 Score=23.76 Aligned_cols=15 Identities=33% Similarity=0.656 Sum_probs=12.5
Q ss_pred HHHHHHHhCCEEEeH
Q 030771 108 ARARIEKAGGECLTF 122 (171)
Q Consensus 108 AreKIekAGGkv~~l 122 (171)
-..+|.++||+++.+
T Consensus 39 EQQrI~K~GGkI~KV 53 (67)
T d1b33n_ 39 EQQRIQKMGGKIVKV 53 (67)
T ss_dssp HHHHHHHTTCEEEEE
T ss_pred HHHHHHHhCCeEEEE
Confidence 467899999999765
No 11
>d1s98a_ b.124.1.1 (A:) Fe-S scaffold protein IscA (YfhF) {Escherichia coli [TaxId: 562]}
Probab=25.24 E-value=32 Score=22.14 Aligned_cols=27 Identities=15% Similarity=0.188 Sum_probs=20.7
Q ss_pred EecCHHHHHHHHHhCCEEEeHHHHHHhCCCCCcEEEe
Q 030771 102 LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVCV 138 (171)
Q Consensus 102 ~kfS~sAreKIekAGGkv~~ldqL~~~~P~G~~v~ll 138 (171)
..+|++|.++|. ++.+..+++..++|-
T Consensus 2 I~iT~~A~~~i~----------~ll~~~~~~~~lRi~ 28 (97)
T d1s98a_ 2 ITLSDSAAARVN----------TFLANRGKGFGLRLG 28 (97)
T ss_dssp CEECHHHHHHHH----------HHHHTTCCCCEEEEE
T ss_pred EEECHHHHHHHH----------HHHHhCCCCcEEEEE
Confidence 458999999987 566677778877775
No 12
>d1elka_ a.118.9.2 (A:) Tom1 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.98 E-value=12 Score=26.62 Aligned_cols=36 Identities=11% Similarity=0.249 Sum_probs=29.0
Q ss_pred CCCCHHHHHH-HHHHHHhhhccCChHHHHHHHhhhcC
Q 030771 20 KSDDIYLKLL-VKLYRFLVRRTDSNFNKVILKRLFMS 55 (171)
Q Consensus 20 ~stN~~L~~L-i~~lk~~ar~t~~pl~rrI~KRlf~~ 55 (171)
.+.||..+.+ +.++....+++|.+|++.|+.+-|.+
T Consensus 60 ~~~n~~v~l~aL~LLe~~vkNCG~~fh~evas~~Fl~ 96 (153)
T d1elka_ 60 GNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVE 96 (153)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHccHHHHHHHhhHHHHH
Confidence 3678755543 48999999999999999999988865
No 13
>d2raqa1 d.58.61.1 (A:3-95) Uncharacterized protein MTH889 {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=23.67 E-value=12 Score=25.49 Aligned_cols=32 Identities=16% Similarity=0.287 Sum_probs=23.2
Q ss_pred cCeEEEEEecC-HHHHHHHHHhCCEEEeHHHHH
Q 030771 95 PALKVTALRFT-ETARARIEKAGGECLTFDQLA 126 (171)
Q Consensus 95 ~kl~V~A~kfS-~sAreKIekAGGkv~~ldqL~ 126 (171)
-+++|....+- ..-++.||+.||.+.++||.+
T Consensus 49 i~itiEG~~idyd~i~~~IE~~Gg~IHSIDeV~ 81 (93)
T d2raqa1 49 IKVTIQGNDLDFDEITRAIESYGGSIHSVDEVV 81 (93)
T ss_dssp EEEEEECSSCCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred EEEEEEecCCCHHHHHHHHHHcCCeEEEEeeee
Confidence 34555554443 456788999999999999864
No 14
>d1ctfa_ d.45.1.1 (A:) Ribosomal protein L7/12, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.91 E-value=29 Score=22.02 Aligned_cols=15 Identities=33% Similarity=0.503 Sum_probs=12.4
Q ss_pred HHHHHHHHHhCCEEE
Q 030771 106 ETARARIEKAGGECL 120 (171)
Q Consensus 106 ~sAreKIekAGGkv~ 120 (171)
+.+++++|++|++|.
T Consensus 52 E~ik~~Le~aGA~Ve 66 (68)
T d1ctfa_ 52 EALKKALEEAGAEVE 66 (68)
T ss_dssp HHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHcCCEEE
Confidence 457788999999985
No 15
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.54 E-value=11 Score=26.60 Aligned_cols=40 Identities=10% Similarity=0.151 Sum_probs=30.7
Q ss_pred CCCCCCCCHHHHHH-HHHHHHhhhccCChHHHHHHHhhhcC
Q 030771 16 RTAPKSDDIYLKLL-VKLYRFLVRRTDSNFNKVILKRLFMS 55 (171)
Q Consensus 16 rk~~~stN~~L~~L-i~~lk~~ar~t~~pl~rrI~KRlf~~ 55 (171)
+|+..+.||..+.+ +.++....+++|.+|++.|+.+-|.+
T Consensus 51 ~krl~~~~~~~~l~aL~LLe~~vkNCG~~f~~evas~~Fl~ 91 (145)
T d1ujka_ 51 AHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLN 91 (145)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHHHTSCCHHHHHHHTSHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHH
Confidence 34455667765543 67788889999999999999988875
No 16
>d2cora1 g.39.1.3 (A:43-73) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.25 E-value=7.1 Score=21.51 Aligned_cols=13 Identities=31% Similarity=0.547 Sum_probs=10.3
Q ss_pred EEEeecCCCchhH
Q 030771 135 TVCVFNANYCLPI 147 (171)
Q Consensus 135 v~ll~g~~~~~~~ 147 (171)
-+=++|.-||||-
T Consensus 13 ArEl~geLyCLpC 25 (31)
T d2cora1 13 ARELKGELYCLPC 25 (31)
T ss_dssp CEEETTEEECHHH
T ss_pred HHHhcCCEEEEec
Confidence 3567899999994
No 17
>d1dd3a2 d.45.1.1 (A:58-128) Ribosomal protein L7/12, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=21.01 E-value=33 Score=21.94 Aligned_cols=15 Identities=33% Similarity=0.570 Sum_probs=12.6
Q ss_pred HHHHHHHHHhCCEEE
Q 030771 106 ETARARIEKAGGECL 120 (171)
Q Consensus 106 ~sAreKIekAGGkv~ 120 (171)
+.+++++|++|++|.
T Consensus 55 E~~K~~Le~aGA~V~ 69 (71)
T d1dd3a2 55 EEIKKKLEEAGAEVE 69 (71)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCEEE
Confidence 567889999999985
No 18
>d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=20.01 E-value=52 Score=22.82 Aligned_cols=66 Identities=11% Similarity=0.063 Sum_probs=43.2
Q ss_pred ecCHHHHHHHHHhCCEEEe-------HHHHHHhCCCCCcEEEeecCCCc-----hhHHHHH-HhhhcchhhHHHhhhhhh
Q 030771 103 RFTETARARIEKAGGECLT-------FDQLALRAPLGQNTVCVFNANYC-----LPIMLLI-ITFAADFTWLCIILTMQV 169 (171)
Q Consensus 103 kfS~sAreKIekAGGkv~~-------ldqL~~~~P~G~~v~ll~g~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~ 169 (171)
.||......+++.|.++.. ++++...+|+ ++.+.-||-.. .+....+ -.+..+.--|.|-|.||+
T Consensus 12 sft~Ni~~~l~~lG~~~~vi~~d~~~~~~i~~~~~~--gvilsgGp~~~~~~~~~~~~~~i~~~~~~~~PiLGIClG~Ql 89 (195)
T d1qdlb_ 12 SFVYNIAQIVGELGSYPIVIRNDEISIKGIERIDPD--RLIISPGPGTPEKREDIGVSLDVIKYLGKRTPILGVCLGHQA 89 (195)
T ss_dssp SSHHHHHHHHHHTTCEEEEEETTTSCHHHHHHHCCS--EEEECCCSSCTTSHHHHTTHHHHHHHHTTTSCEEEETHHHHH
T ss_pred chHHHHHHHHHhCCCeEEEEeCCCCCHHHHHhhCCC--ccccCCCCCccccccccccchhhhhhhcCCCCEEEeehhhhh
Confidence 4677878889999998753 5666666664 57676776542 2333322 334556667778888997
Q ss_pred c
Q 030771 170 M 170 (171)
Q Consensus 170 ~ 170 (171)
|
T Consensus 90 l 90 (195)
T d1qdlb_ 90 I 90 (195)
T ss_dssp H
T ss_pred h
Confidence 6
Done!