Query 030772
Match_columns 171
No_of_seqs 149 out of 444
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 06:24:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030772.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030772hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wff_A Riken cDNA 2810002D23 p 100.0 1.8E-30 6E-35 189.6 0.8 62 105-166 21-83 (85)
2 1wfh_A Zinc finger (AN1-like) 99.9 1.5E-27 5.2E-32 166.0 1.2 55 103-157 9-63 (64)
3 1wg2_A Zinc finger (AN1-like) 99.9 5.3E-27 1.8E-31 163.3 1.7 54 103-156 9-62 (64)
4 1wfl_A Zinc finger protein 216 99.9 1.7E-25 5.7E-30 159.6 4.8 52 104-155 20-71 (74)
5 1wfp_A Zinc finger (AN1-like) 99.9 6.7E-26 2.3E-30 161.6 1.9 54 103-156 19-72 (74)
6 1x4w_A Hypothetical protein FL 99.9 6.7E-26 2.3E-30 159.0 0.4 54 103-156 9-65 (67)
7 2kzy_A ZNF216-A20, zfand5 prot 99.7 3.6E-19 1.2E-23 123.1 2.8 39 17-55 9-47 (62)
8 2c7n_A Rabex-5, GEF 1, RAB gua 99.7 1.9E-18 6.4E-23 122.9 2.0 41 10-50 5-45 (74)
9 3oj3_I Tumor necrosis factor a 99.6 1E-15 3.5E-20 101.0 2.6 28 22-49 19-47 (49)
10 1wfe_A Riken cDNA 2310008M20 p 99.3 1.3E-13 4.4E-18 100.5 1.0 59 105-171 21-82 (86)
11 1x4v_A Hypothetical protein LO 99.3 4.5E-13 1.5E-17 92.7 2.8 42 104-146 7-51 (63)
12 1wys_A Riken cDNA 2310008M20 p 99.2 2E-12 6.8E-17 92.2 2.3 42 108-150 13-57 (75)
13 2eqe_A Tumor necrosis factor, 97.8 1.1E-05 3.6E-10 52.7 2.8 29 20-48 14-43 (48)
14 1vfy_A Phosphatidylinositol-3- 94.3 0.019 6.5E-07 39.3 2.1 27 110-136 12-41 (73)
15 1wfk_A Zinc finger, FYVE domai 94.0 0.035 1.2E-06 39.5 3.0 29 108-136 8-39 (88)
16 2yw8_A RUN and FYVE domain-con 93.7 0.032 1.1E-06 39.0 2.2 28 109-136 19-49 (82)
17 1x4u_A Zinc finger, FYVE domai 93.3 0.047 1.6E-06 38.2 2.6 28 109-136 14-44 (84)
18 1z2q_A LM5-1; membrane protein 93.1 0.046 1.6E-06 38.3 2.3 28 109-136 21-51 (84)
19 1joc_A EEA1, early endosomal a 93.1 0.029 1E-06 42.3 1.4 28 109-136 69-99 (125)
20 3zyq_A Hepatocyte growth facto 92.3 0.086 2.9E-06 43.0 3.2 29 108-136 163-194 (226)
21 1dvp_A HRS, hepatocyte growth 92.2 0.083 2.9E-06 42.6 3.0 28 109-136 161-191 (220)
22 3t7l_A Zinc finger FYVE domain 91.3 0.072 2.5E-06 37.9 1.5 28 109-136 20-50 (90)
23 1y02_A CARP2, FYVE-ring finger 90.2 0.096 3.3E-06 39.6 1.4 41 109-149 19-65 (120)
24 2vrw_B P95VAV, VAV1, proto-onc 81.9 0.53 1.8E-05 40.3 1.8 42 107-149 355-400 (406)
25 3mpx_A FYVE, rhogef and PH dom 81.1 0.31 1.1E-05 41.9 0.0 27 109-135 375-404 (434)
26 2eqf_A Tumor necrosis factor, 80.4 0.72 2.5E-05 29.5 1.5 24 24-47 13-36 (46)
27 4b6d_A RAC GTPase-activating p 78.4 0.65 2.2E-05 30.9 0.9 24 108-131 18-44 (61)
28 3c5k_A HD6, histone deacetylas 74.7 1.2 4.1E-05 32.9 1.6 30 109-142 24-54 (109)
29 2eqg_A Tumor necrosis factor, 69.6 4.3 0.00015 26.2 3.1 23 26-48 17-39 (49)
30 2gmg_A Hypothetical protein PF 64.1 3.3 0.00011 30.8 2.0 26 118-145 62-88 (105)
31 1wd2_A Ariadne-1 protein homol 60.7 3.9 0.00013 27.0 1.7 29 108-136 5-40 (60)
32 1ptq_A Protein kinase C delta 59.3 4.6 0.00016 24.7 1.8 24 108-131 10-37 (50)
33 2enz_A NPKC-theta, protein kin 58.9 10 0.00035 24.7 3.5 25 108-132 22-50 (65)
34 3h0g_L DNA-directed RNA polyme 56.1 5.4 0.00018 27.0 1.8 23 108-130 20-46 (63)
35 3ky9_A Proto-oncogene VAV; cal 54.6 5.2 0.00018 36.1 2.0 40 107-147 527-570 (587)
36 2yuu_A NPKC-delta, protein kin 53.9 5.9 0.0002 27.1 1.8 25 108-132 27-55 (83)
37 1ef4_A Subunit N, DNA-directed 53.7 3.8 0.00013 27.2 0.7 13 109-121 3-15 (55)
38 1kbe_A Kinase suppressor of RA 53.7 4.3 0.00015 25.9 0.9 22 110-132 15-37 (49)
39 1r79_A Diacylglycerol kinase, 53.1 5.7 0.0002 28.0 1.6 23 109-131 38-65 (84)
40 1twf_J DNA-directed RNA polyme 51.6 4.8 0.00016 27.9 1.0 14 108-121 3-16 (70)
41 1z60_A TFIIH basal transcripti 51.1 4.3 0.00015 27.0 0.7 25 110-134 16-42 (59)
42 2fnf_X Putative RAS effector N 50.3 7.3 0.00025 26.3 1.8 25 107-131 33-58 (72)
43 3uej_A NPKC-delta, protein kin 49.9 7.7 0.00026 25.2 1.8 24 108-131 19-46 (65)
44 2co8_A NEDD9 interacting prote 47.6 12 0.0004 25.0 2.4 29 110-138 43-73 (82)
45 1faq_A RAF-1; transferase, ser 47.3 5.7 0.00019 24.5 0.7 24 108-132 13-37 (52)
46 1rfh_A RAS association (ralgds 45.9 6.5 0.00022 25.4 0.9 25 107-131 20-45 (59)
47 4ayb_N DNA-directed RNA polyme 44.2 6.5 0.00022 27.0 0.7 13 109-121 4-16 (66)
48 2eli_A Protein kinase C alpha 42.6 18 0.00063 24.8 2.9 43 108-150 27-73 (85)
49 1y8f_A UNC-13 homolog A, MUNC1 41.2 13 0.00043 24.3 1.8 24 108-131 23-50 (66)
50 2lce_A B-cell lymphoma 6 prote 40.8 15 0.00051 22.8 2.0 28 107-134 15-57 (74)
51 3f6q_B LIM and senescent cell 40.6 7.4 0.00025 24.6 0.5 27 110-136 40-66 (72)
52 3j21_g 50S ribosomal protein L 39.4 9 0.00031 24.9 0.8 24 108-131 13-37 (51)
53 1x68_A FHL5 protein; four-and- 38.2 15 0.00051 23.9 1.8 28 110-137 36-63 (76)
54 2enn_A NPKC-theta, protein kin 38.2 10 0.00034 25.7 0.9 26 107-132 32-61 (77)
55 4gzn_C ZFP-57, zinc finger pro 37.8 9.9 0.00034 24.2 0.8 27 108-134 3-44 (60)
56 2d8t_A Dactylidin, ring finger 36.2 25 0.00087 22.3 2.6 48 108-156 14-64 (71)
57 2kwq_A Protein MCM10 homolog; 35.4 12 0.00042 27.0 1.0 20 123-142 48-67 (92)
58 4gne_A Histone-lysine N-methyl 35.2 15 0.00051 26.9 1.5 27 110-139 59-86 (107)
59 2d8x_A Protein pinch; LIM doma 34.4 10 0.00036 24.1 0.5 27 110-136 32-58 (70)
60 2ysj_A Tripartite motif-contai 34.3 31 0.0011 21.2 2.7 25 109-134 20-44 (63)
61 2ayj_A 50S ribosomal protein L 31.4 13 0.00044 24.7 0.6 23 108-130 18-41 (56)
62 2uzg_A Ubiquitin carboxyl-term 31.1 23 0.0008 25.1 1.9 31 109-142 25-58 (97)
63 1x64_A Alpha-actinin-2 associa 30.9 13 0.00043 25.0 0.4 23 111-133 53-75 (89)
64 1vd4_A Transcription initiatio 30.6 16 0.00056 22.3 0.9 26 108-133 13-50 (62)
65 2ysl_A Tripartite motif-contai 30.5 36 0.0012 21.3 2.7 25 109-134 20-44 (73)
66 1nyp_A Pinch protein; LIM doma 30.4 13 0.00046 23.3 0.5 27 110-136 32-58 (66)
67 2elq_A Zinc finger protein 406 30.4 18 0.00062 18.9 1.0 11 123-133 9-20 (36)
68 2ecj_A Tripartite motif-contai 30.3 49 0.0017 19.6 3.1 25 109-134 15-39 (58)
69 3uk3_C Zinc finger protein 217 30.2 20 0.00068 20.8 1.2 11 109-119 4-14 (57)
70 1bbo_A Human enhancer-binding 30.1 21 0.00072 20.7 1.3 11 123-133 29-40 (57)
71 1znf_A 31ST zinc finger from X 29.9 16 0.00054 17.6 0.6 11 124-134 2-13 (27)
72 2adr_A ADR1; transcription reg 29.9 21 0.00073 20.9 1.3 10 110-119 3-12 (60)
73 1g47_A Pinch protein; LIM doma 29.6 14 0.00048 23.8 0.5 26 110-135 40-65 (77)
74 2eps_A POZ-, at HOOK-, and zin 29.4 37 0.0013 19.8 2.4 11 108-118 11-21 (54)
75 1x4l_A Skeletal muscle LIM-pro 28.8 15 0.00051 23.5 0.5 27 110-136 36-62 (72)
76 1ard_A Yeast transcription fac 28.6 16 0.00055 17.7 0.5 10 124-133 3-13 (29)
77 2gqj_A Zinc finger protein KIA 28.5 19 0.00064 24.0 1.0 13 108-120 23-35 (98)
78 1x61_A Thyroid receptor intera 28.3 14 0.00049 23.5 0.3 26 110-135 34-59 (72)
79 1yop_A KTI11P; zinc finger, me 28.1 14 0.00049 26.1 0.3 15 121-135 21-35 (83)
80 2ecv_A Tripartite motif-contai 28.0 55 0.0019 20.8 3.3 26 109-135 19-44 (85)
81 1e4u_A Transcriptional repress 27.9 40 0.0014 22.6 2.6 26 109-134 11-39 (78)
82 2ehe_A Four and A half LIM dom 27.8 28 0.00095 22.7 1.8 28 110-137 44-71 (82)
83 2zet_C Melanophilin; complex, 27.8 22 0.00074 27.5 1.3 30 108-137 67-100 (153)
84 2m0d_A Zinc finger and BTB dom 27.4 16 0.00056 17.7 0.4 10 124-133 4-14 (30)
85 2lvu_A Zinc finger and BTB dom 32.9 13 0.00046 17.9 0.0 12 124-135 3-15 (26)
86 2cu8_A Cysteine-rich protein 2 26.8 27 0.00092 22.5 1.5 25 110-134 37-61 (76)
87 1paa_A Yeast transcription fac 26.6 19 0.00066 17.7 0.6 11 124-134 3-14 (30)
88 1x4k_A Skeletal muscle LIM-pro 26.4 16 0.00056 23.1 0.3 27 110-136 34-60 (72)
89 2kvf_A Zinc finger and BTB dom 26.3 18 0.00061 17.6 0.4 11 124-134 4-15 (28)
90 1zbd_B Rabphilin-3A; G protein 26.3 28 0.00096 26.2 1.7 31 107-137 53-87 (134)
91 2kvh_A Zinc finger and BTB dom 26.2 17 0.0006 17.6 0.4 10 124-133 4-14 (27)
92 1klr_A Zinc finger Y-chromosom 26.2 18 0.00062 17.5 0.5 10 124-133 3-13 (30)
93 2yqq_A Zinc finger HIT domain- 26.1 46 0.0016 21.8 2.5 24 109-135 12-36 (56)
94 2jr7_A DPH3 homolog; DESR1, CS 26.0 16 0.00055 26.2 0.3 12 121-132 21-32 (89)
95 1a7i_A QCRP2 (LIM1); LIM domai 25.9 18 0.00062 23.6 0.5 27 110-136 35-61 (81)
96 1x62_A C-terminal LIM domain p 25.8 11 0.00038 24.8 -0.6 26 110-135 42-67 (79)
97 2elo_A Zinc finger protein 406 25.6 25 0.00086 18.4 1.0 10 123-132 9-19 (37)
98 1x6e_A Zinc finger protein 24; 25.6 24 0.00081 21.8 1.0 12 108-119 13-24 (72)
99 2csy_A Zinc finger protein 183 25.6 48 0.0016 21.5 2.6 25 109-134 15-39 (81)
100 2m0e_A Zinc finger and BTB dom 25.6 20 0.00067 17.2 0.5 11 124-134 3-14 (29)
101 2m0f_A Zinc finger and BTB dom 25.5 18 0.00062 17.4 0.4 10 124-133 3-13 (29)
102 2csz_A Synaptotagmin-like prot 25.4 35 0.0012 23.8 1.9 32 107-138 23-58 (76)
103 2row_A RHO-associated protein 25.4 17 0.00057 25.6 0.3 42 107-148 33-83 (84)
104 2ctd_A Zinc finger protein 512 25.2 26 0.00089 23.7 1.3 11 109-119 34-44 (96)
105 2ct2_A Tripartite motif protei 25.1 60 0.002 20.9 3.0 26 109-134 15-43 (88)
106 1p7a_A BF3, BKLF, kruppel-like 25.1 27 0.00092 18.2 1.1 9 124-132 12-21 (37)
107 2kvg_A Zinc finger and BTB dom 25.1 18 0.00062 17.8 0.3 10 124-133 4-14 (27)
108 2cot_A Zinc finger protein 435 24.8 60 0.002 20.0 2.9 13 108-120 17-29 (77)
109 1x5w_A Zinc finger protein 64, 24.7 32 0.0011 20.9 1.5 12 108-119 8-19 (70)
110 2yur_A Retinoblastoma-binding 24.5 53 0.0018 21.0 2.6 27 108-135 14-41 (74)
111 1wyh_A SLIM 2, skeletal muscle 24.4 18 0.00063 22.9 0.3 27 110-136 34-60 (72)
112 1jm7_B BARD1, BRCA1-associated 24.3 33 0.0011 24.0 1.7 36 109-146 22-60 (117)
113 2elx_A Zinc finger protein 406 24.3 24 0.00081 18.1 0.7 10 123-132 7-17 (35)
114 2dar_A PDZ and LIM domain prot 24.0 21 0.00071 24.0 0.5 11 109-119 25-35 (90)
115 1twf_L ABC10-alpha, DNA-direct 23.9 23 0.00079 24.1 0.8 23 108-130 27-53 (70)
116 2egp_A Tripartite motif-contai 23.8 49 0.0017 21.0 2.4 25 109-134 12-36 (79)
117 2d8z_A Four and A half LIM dom 23.7 21 0.0007 22.6 0.4 26 110-135 32-57 (70)
118 1wge_A Hypothetical protein 26 23.5 20 0.00067 25.3 0.3 13 121-133 28-40 (83)
119 2ea6_A Ring finger protein 4; 23.5 42 0.0014 20.6 1.9 27 108-134 14-46 (69)
120 2db6_A SH3 and cysteine rich d 23.5 22 0.00077 23.7 0.6 25 108-132 27-55 (74)
121 2d8y_A Eplin protein; LIM doma 23.4 20 0.00067 24.1 0.3 27 110-136 43-69 (91)
122 1srk_A Zinc finger protein ZFP 23.0 26 0.00088 18.1 0.7 11 123-133 7-18 (35)
123 1x63_A Skeletal muscle LIM-pro 22.8 21 0.00071 23.3 0.3 27 110-136 44-70 (82)
124 1wil_A KIAA1045 protein; ring 22.8 55 0.0019 23.6 2.6 25 108-132 14-39 (89)
125 2lvt_A Zinc finger and BTB dom 28.3 18 0.00062 17.8 0.0 11 124-134 3-14 (29)
126 1e0f_I Haemadin, factor IIA; c 22.4 52 0.0018 21.4 2.2 30 120-149 13-42 (57)
127 2djb_A Polycomb group ring fin 22.0 58 0.002 20.6 2.4 25 109-134 15-40 (72)
128 3cc2_Z 50S ribosomal protein L 22.0 25 0.00085 26.5 0.7 30 107-136 58-92 (116)
129 1rik_A E6APC1 peptide; E6-bind 21.9 24 0.00081 17.1 0.4 11 124-134 3-14 (29)
130 2lv2_A Insulinoma-associated p 21.7 29 0.00098 23.5 0.9 27 108-134 27-68 (85)
131 2ee8_A Protein ODD-skipped-rel 21.5 78 0.0027 20.5 3.1 27 108-134 16-57 (106)
132 1ffk_W Ribosomal protein L37AE 21.4 30 0.001 23.9 0.9 30 106-135 24-58 (73)
133 2elt_A Zinc finger protein 406 21.0 34 0.0012 17.6 1.0 10 123-132 9-19 (36)
134 2egq_A FHL1 protein; LIM domai 20.8 26 0.00087 22.5 0.5 27 110-136 47-73 (77)
135 2elr_A Zinc finger protein 406 20.5 33 0.0011 17.7 0.8 8 110-117 10-17 (36)
136 2elp_A Zinc finger protein 406 20.4 36 0.0012 17.8 1.0 11 123-133 9-20 (37)
137 3l11_A E3 ubiquitin-protein li 20.2 34 0.0012 23.8 1.0 25 109-134 15-39 (115)
No 1
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.96 E-value=1.8e-30 Score=189.65 Aligned_cols=62 Identities=44% Similarity=0.997 Sum_probs=59.1
Q ss_pred CCCCCCcccccccccccc-cceeecCccccCCcCCCCCCCCCccchHhhHHHHHHhCCccccc
Q 030772 105 EKRPANRCSFCRKRIGLT-GFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKAD 166 (171)
Q Consensus 105 ~~~~~~rC~~C~kkvgl~-gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~k~NP~v~~~ 166 (171)
+++.++||+.|+|||||+ +|.||||++||+.|||||+|+|+||||++||++|+|+||+|+++
T Consensus 21 ~k~~~~rC~~C~kkvgl~~~f~CrCg~~FC~~HRy~e~H~C~fDyK~~gr~~iak~NPvV~a~ 83 (85)
T 1wff_A 21 KKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS 83 (85)
T ss_dssp CCCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred CcccCccchhhCCeecccCCeEcCCCCEecccCCCccCCCCcchhhHHHHHHHHHHCCeecCC
Confidence 456789999999999996 99999999999999999999999999999999999999999986
No 2
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.93 E-value=1.5e-27 Score=166.01 Aligned_cols=55 Identities=53% Similarity=1.141 Sum_probs=51.2
Q ss_pred CCCCCCCCcccccccccccccceeecCccccCCcCCCCCCCCCccchHhhHHHHH
Q 030772 103 NPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAIA 157 (171)
Q Consensus 103 ~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~ 157 (171)
.+++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|+
T Consensus 9 ~~~k~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~ 63 (64)
T 1wfh_A 9 PSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS 63 (64)
T ss_dssp CCCCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCCC
T ss_pred CCCCCcCCcChhhCCccCccCEEeecCCEeccccCCcccCCCCchhhHHHHHHhc
Confidence 3456778999999999999999999999999999999999999999999999875
No 3
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.92 E-value=5.3e-27 Score=163.32 Aligned_cols=54 Identities=48% Similarity=1.122 Sum_probs=50.1
Q ss_pred CCCCCCCCcccccccccccccceeecCccccCCcCCCCCCCCCccchHhhHHHH
Q 030772 103 NPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAI 156 (171)
Q Consensus 103 ~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l 156 (171)
.+++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus 9 ~~~~~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HR~~e~H~C~fDyk~~gr~~~ 62 (64)
T 1wg2_A 9 SRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS 62 (64)
T ss_dssp SCCSCCSCSCTTTCCCCTTSCEECTTSCEECSSSCSSTTTTCCCCCSCSCCCSC
T ss_pred CCCCCcCCcChhhCCcccccCeEeecCCEecccCCCccccCCCcchhHHhHHHh
Confidence 345567899999999999999999999999999999999999999999999876
No 4
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.91 E-value=1.7e-25 Score=159.59 Aligned_cols=52 Identities=58% Similarity=1.216 Sum_probs=48.2
Q ss_pred CCCCCCCcccccccccccccceeecCccccCCcCCCCCCCCCccchHhhHHH
Q 030772 104 PEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDA 155 (171)
Q Consensus 104 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~ 155 (171)
+.+..++||+.|+|||||++|.||||++||+.|||+|+|+|+||||++||++
T Consensus 20 ~~k~~~nRC~~CrKkvgL~gf~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~ 71 (74)
T 1wfl_A 20 LPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEASGP 71 (74)
T ss_dssp CCCSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSSCC
T ss_pred cCCCcCCcChhhCCcccccCeecCCCCEechhcCCCccCCCcchhhhhchhh
Confidence 3455689999999999999999999999999999999999999999999864
No 5
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=99.91 E-value=6.7e-26 Score=161.63 Aligned_cols=54 Identities=48% Similarity=1.114 Sum_probs=50.2
Q ss_pred CCCCCCCCcccccccccccccceeecCccccCCcCCCCCCCCCccchHhhHHHH
Q 030772 103 NPEKRPANRCSFCRKRIGLTGFKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAI 156 (171)
Q Consensus 103 ~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l 156 (171)
.++++.++||+.|+|||||++|.||||++||+.|||||+|+|+||||++||++|
T Consensus 19 ~~~k~~~~RC~~C~kkvgL~~f~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~~ 72 (74)
T 1wfp_A 19 DPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVASGPS 72 (74)
T ss_dssp CCTTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCCCCC
T ss_pred ccCcccCccchhhcCcccccceEeccCCEeccccCCCcCCCCcCchhHHhHHhh
Confidence 345667899999999999999999999999999999999999999999999876
No 6
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.91 E-value=6.7e-26 Score=159.02 Aligned_cols=54 Identities=31% Similarity=0.786 Sum_probs=49.4
Q ss_pred CCCCCCCCccccccccccccc---ceeecCccccCCcCCCCCCCCCccchHhhHHHH
Q 030772 103 NPEKRPANRCSFCRKRIGLTG---FKCRCEQTFCSLHRYSDKHNCVFDYKSAGQDAI 156 (171)
Q Consensus 103 ~~~~~~~~rC~~C~kkvgl~g---f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l 156 (171)
.++++.++||+.|+|||||++ |+||||++||+.|||||+|+|+||||++||+.|
T Consensus 9 ~~~~~~~~rC~~C~kk~gL~~~egf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~~ 65 (67)
T 1x4w_A 9 RSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSGPS 65 (67)
T ss_dssp CCSCSCTTBCSSSCCBCCHHHHHHHCCSSSCCCCTTTCSTGGGTCSSCSSCSSCCCC
T ss_pred ccCCccCCcchhhCCeecccccCceEecCCCEehhccCCccccCCcccccccccccc
Confidence 345667899999999999995 999999999999999999999999999999764
No 7
>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A
Probab=99.74 E-value=3.6e-19 Score=123.06 Aligned_cols=39 Identities=38% Similarity=0.961 Sum_probs=34.4
Q ss_pred CCCCccccccCCCCCCCcCCCcchhhhhHHHHhhhcCCC
Q 030772 17 TQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLKQSKNP 55 (171)
Q Consensus 17 ~p~~p~lC~ngCGFfGs~at~nlCSkCyr~~~~~~~~~~ 55 (171)
+|++|+||+|||||||||+|+||||||||+++++++++.
T Consensus 9 ~~~~~~lC~ngCGFfGnpaT~nlCSkCyr~~~~~~~~~~ 47 (62)
T 2kzy_A 9 QTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSG 47 (62)
T ss_dssp CCSCCCBCTTCCSSBCCTTTTSCCHHHHHHHHHHHHHHC
T ss_pred CCCcccchhhCCCCcCChhhcCcCHHHHHHHHHhhhccc
Confidence 477899999999999999999999999999987665543
No 8
>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B
Probab=99.71 E-value=1.9e-18 Score=122.87 Aligned_cols=41 Identities=24% Similarity=0.729 Sum_probs=26.5
Q ss_pred hhhhcCCCCCCccccccCCCCCCCcCCCcchhhhhHHHHhh
Q 030772 10 LEETSHETQNTPIYCANNCGFFGSANTNNLCSKCYKDYLLK 50 (171)
Q Consensus 10 ~~~~~~q~p~~p~lC~ngCGFfGs~at~nlCSkCyr~~~~~ 50 (171)
.+.++++.|++|+||+|||||||||+|+||||||||+.+.+
T Consensus 5 ~~~~~~q~pe~~~lC~ngCGFfGnpaT~nlCSkCyrd~~~k 45 (74)
T 2c7n_A 5 SERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHK 45 (74)
T ss_dssp -------------CCTTCSSSCCCGGGTTCCHHHHHHHHHH
T ss_pred hhhccCCCCCcchhHHhCCCCCCChhhcCccHHHHHHHHHH
Confidence 34566888999999999999999999999999999998644
No 9
>3oj3_I Tumor necrosis factor alpha-induced protein 3; ubiquitin, zinc finger, zinc ION, protein binding-hydrolase; 2.50A {Homo sapiens} PDB: 3oj4_C
Probab=99.56 E-value=1e-15 Score=100.96 Aligned_cols=28 Identities=25% Similarity=0.848 Sum_probs=26.5
Q ss_pred cccc-cCCCCCCCcCCCcchhhhhHHHHh
Q 030772 22 IYCA-NNCGFFGSANTNNLCSKCYKDYLL 49 (171)
Q Consensus 22 ~lC~-ngCGFfGs~at~nlCSkCyr~~~~ 49 (171)
+||+ |||||||||+|+|||||||||++.
T Consensus 19 ~lC~~ngCGFfG~p~t~n~CSkCyre~~e 47 (49)
T 3oj3_I 19 SKCRKAGCVYFGTPENKGFCTLCFIEYRE 47 (49)
T ss_dssp CBCSSTTCSSBCBGGGTTBCHHHHHHHHH
T ss_pred cccccCCCCCccCcccCCcchHHHHHHHH
Confidence 6999 999999999999999999999864
No 10
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=99.34 E-value=1.3e-13 Score=100.50 Aligned_cols=59 Identities=27% Similarity=0.578 Sum_probs=49.5
Q ss_pred CCCCCCcccc--cccccccccceee-cCccccCCcCCCCCCCCCccchHhhHHHHHHhCCcccccccccC
Q 030772 105 EKRPANRCSF--CRKRIGLTGFKCR-CEQTFCSLHRYSDKHNCVFDYKSAGQDAIAKANPVVKADKIEKI 171 (171)
Q Consensus 105 ~~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~~gr~~l~k~NP~v~~~Kl~kI 171 (171)
.+..++||.. |+++ +|++|.|+ |+.+||..|||++.|+|+.. .+.+.++...+.++.+|
T Consensus 21 ~~~~~~~C~~~~Ck~~-~~l~f~C~~C~~~FC~~HR~~e~H~C~~~-------~~~k~~~~~~~~l~~~~ 82 (86)
T 1wfe_A 21 DEHKSYSCSFKGCTDV-ELVAVICPYCEKNFCLRHRHQSDHDCEKL-------EVAKPRMAATQKLVRSG 82 (86)
T ss_dssp SCSCCEECCSTTCCCE-ESSCEECTTTCCEECGGGCSTGGGTCSSS-------SCCCSSCCCCCCCSSCS
T ss_pred cCCCCCCCCCcCCCCC-CccceECCCCCcccccccCCccCCCCCCC-------cccccchHHHHHHHHHH
Confidence 3456799999 9998 88999999 99999999999999999975 34567777777777665
No 11
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=4.5e-13 Score=92.73 Aligned_cols=42 Identities=33% Similarity=0.756 Sum_probs=38.0
Q ss_pred CCCCCCCcccc--cccccccccceee-cCccccCCcCCCCCCCCCc
Q 030772 104 PEKRPANRCSF--CRKRIGLTGFKCR-CEQTFCSLHRYSDKHNCVF 146 (171)
Q Consensus 104 ~~~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f 146 (171)
..+...+||.. |+++ +|++|.|+ |+.+||..|||+|+|+|+-
T Consensus 7 k~k~~~~~Cs~~~Ck~~-~ll~f~C~~C~~~FC~~HR~~e~H~C~~ 51 (63)
T 1x4v_A 7 GRKIFTNKCERAGCRQR-EMMKLTCERCSRNFCIKHRHPLDHDCSG 51 (63)
T ss_dssp CCCTTCCCCCSTTCCCC-CSSCCBCSSSCCBCCHHHHSTTSSCCCS
T ss_pred CCcccCCCCCccCCCCC-CccceECCCCCcccCcccCCccCCcCCC
Confidence 34556899999 9998 99999999 9999999999999999973
No 12
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=99.24 E-value=2e-12 Score=92.23 Aligned_cols=42 Identities=33% Similarity=0.734 Sum_probs=39.0
Q ss_pred CCCcccc--cccccccccceee-cCccccCCcCCCCCCCCCccchH
Q 030772 108 PANRCSF--CRKRIGLTGFKCR-CEQTFCSLHRYSDKHNCVFDYKS 150 (171)
Q Consensus 108 ~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~ 150 (171)
..+||.. |+++ ++++|+|+ |+.+||..|||++.|+|+++++.
T Consensus 13 ~g~~Cs~~~C~~~-dflpf~C~~C~~~FC~~HR~~e~H~C~~~~~~ 57 (75)
T 1wys_A 13 IGQHCQVQHCRQR-DFLPFVCDGCSGIFCLEHRSKDSHGCSEVNVV 57 (75)
T ss_dssp CCCCCSCTTTCCC-SCCCEECTTTCCEECSTTCSSGGGTCCCCSSC
T ss_pred cCCCcCcccCCCc-cceeeECcccCcCcCcccCCccccCCCCCccc
Confidence 3689998 9997 89999999 99999999999999999999863
No 13
>2eqe_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=97.81 E-value=1.1e-05 Score=52.71 Aligned_cols=29 Identities=24% Similarity=0.841 Sum_probs=26.3
Q ss_pred Cccccc-cCCCCCCCcCCCcchhhhhHHHH
Q 030772 20 TPIYCA-NNCGFFGSANTNNLCSKCYKDYL 48 (171)
Q Consensus 20 ~p~lC~-ngCGFfGs~at~nlCSkCyr~~~ 48 (171)
+...|. .||-|||+|.+.++|+.||-++.
T Consensus 14 gt~kCRk~GC~fFGTpen~GFCTlCf~eyr 43 (48)
T 2eqe_A 14 GTSKCRKAGCVYFGTPENKGFCTLCFIEYS 43 (48)
T ss_dssp CSSBCSSTTCCSBCCTTTTTCCHHHHHHHH
T ss_pred ccchhhhcCCCcccCcccCceeeeehhhhh
Confidence 446896 89999999999999999999995
No 14
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=94.33 E-value=0.019 Score=39.33 Aligned_cols=27 Identities=37% Similarity=1.001 Sum_probs=24.1
Q ss_pred Ccccccccccccc--cceee-cCccccCCc
Q 030772 110 NRCSFCRKRIGLT--GFKCR-CEQTFCSLH 136 (171)
Q Consensus 110 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 136 (171)
..|..|+++.+++ -..|| ||.+||+.+
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~C 41 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEH 41 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGG
T ss_pred CcccCCCCccCCccccccCCCCCEEEcccc
Confidence 5899999999997 49999 999999875
No 15
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=93.98 E-value=0.035 Score=39.55 Aligned_cols=29 Identities=28% Similarity=0.745 Sum_probs=25.2
Q ss_pred CCCccccccccccccc--ceee-cCccccCCc
Q 030772 108 PANRCSFCRKRIGLTG--FKCR-CEQTFCSLH 136 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H 136 (171)
....|..|.++.+++. ..|| ||.+||+.+
T Consensus 8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C 39 (88)
T 1wfk_A 8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC 39 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred cCCCCcCcCCcccCccccccCCCCCCEEChhH
Confidence 3578999999999974 8999 999999874
No 16
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=93.70 E-value=0.032 Score=39.01 Aligned_cols=28 Identities=32% Similarity=0.918 Sum_probs=24.4
Q ss_pred CCccccccccccccc--ceee-cCccccCCc
Q 030772 109 ANRCSFCRKRIGLTG--FKCR-CEQTFCSLH 136 (171)
Q Consensus 109 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H 136 (171)
...|..|+++.+++. ..|| ||.+||+.+
T Consensus 19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C 49 (82)
T 2yw8_A 19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTC 49 (82)
T ss_dssp CCBCTTTCCBCBTTBCCEECTTTCCEECSGG
T ss_pred CCcccCcCCcccCccccccCCCCCCEEChHH
Confidence 468999999999874 8999 999999864
No 17
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.31 E-value=0.047 Score=38.24 Aligned_cols=28 Identities=25% Similarity=0.667 Sum_probs=24.6
Q ss_pred CCccccccccccccc--ceee-cCccccCCc
Q 030772 109 ANRCSFCRKRIGLTG--FKCR-CEQTFCSLH 136 (171)
Q Consensus 109 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H 136 (171)
...|..|.++.+|+. ..|| ||.+||+..
T Consensus 14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C 44 (84)
T 1x4u_A 14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRC 44 (84)
T ss_dssp CSSCSSSCCCCCSSSCCEECSSSCCEECTTT
T ss_pred CCcCcCcCCccccchhhhhhcCCCcEEChhh
Confidence 478999999999974 8999 999999864
No 18
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=93.15 E-value=0.046 Score=38.35 Aligned_cols=28 Identities=29% Similarity=0.547 Sum_probs=24.6
Q ss_pred CCccccccccccccc--ceee-cCccccCCc
Q 030772 109 ANRCSFCRKRIGLTG--FKCR-CEQTFCSLH 136 (171)
Q Consensus 109 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H 136 (171)
...|..|+++.+++. ..|| ||.+||+.+
T Consensus 21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C 51 (84)
T 1z2q_A 21 APACNGCGCVFTTTVRRHHCRNCGYVLCGDC 51 (84)
T ss_dssp CCBCTTTCCBCCTTSCCEECTTTCCEECTGG
T ss_pred CCCCcCcCCccccchhcccccCCCcEEChHH
Confidence 578999999999974 8999 999999864
No 19
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=93.13 E-value=0.029 Score=42.29 Aligned_cols=28 Identities=32% Similarity=0.797 Sum_probs=24.3
Q ss_pred CCccccccccccccc--ceee-cCccccCCc
Q 030772 109 ANRCSFCRKRIGLTG--FKCR-CEQTFCSLH 136 (171)
Q Consensus 109 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H 136 (171)
...|..|+++.+++. ..|| ||.+||+.+
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~C 99 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC 99 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred CCCCcCcCCccccccccccCCCCCeEEChHH
Confidence 468999999999874 8999 999999864
No 20
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=92.31 E-value=0.086 Score=43.01 Aligned_cols=29 Identities=38% Similarity=0.917 Sum_probs=25.0
Q ss_pred CCCcccccccccccc--cceee-cCccccCCc
Q 030772 108 PANRCSFCRKRIGLT--GFKCR-CEQTFCSLH 136 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 136 (171)
....|..|+++.+++ -..|| ||.+||+.+
T Consensus 163 ~~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~C 194 (226)
T 3zyq_A 163 DAEECHRCRVQFGVMTRKHHCRACGQIFCGKC 194 (226)
T ss_dssp CCSBCTTTCCBCBTTBCCEECTTTCCEECTTT
T ss_pred cCCCCcCcCCCCCccccccccCCCcCEeChhh
Confidence 346899999999987 49999 999999864
No 21
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=92.19 E-value=0.083 Score=42.58 Aligned_cols=28 Identities=36% Similarity=0.865 Sum_probs=24.6
Q ss_pred CCccccccccccccc--ceee-cCccccCCc
Q 030772 109 ANRCSFCRKRIGLTG--FKCR-CEQTFCSLH 136 (171)
Q Consensus 109 ~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~H 136 (171)
...|..|+++.+++. ..|| ||.+||+.+
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~C 191 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQC 191 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTT
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChHH
Confidence 479999999999874 9999 999999864
No 22
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=91.31 E-value=0.072 Score=37.90 Aligned_cols=28 Identities=32% Similarity=0.886 Sum_probs=24.2
Q ss_pred CCcccccccccccc--cceee-cCccccCCc
Q 030772 109 ANRCSFCRKRIGLT--GFKCR-CEQTFCSLH 136 (171)
Q Consensus 109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H 136 (171)
...|..|.++.+++ -..|| ||.+||+..
T Consensus 20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~C 50 (90)
T 3t7l_A 20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVC 50 (90)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred CCcCcCCCCcccchhhCccccCCCCEECCcc
Confidence 46899999999997 49999 999998753
No 23
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=90.23 E-value=0.096 Score=39.63 Aligned_cols=41 Identities=20% Similarity=0.504 Sum_probs=28.4
Q ss_pred CCcccccccccccc--cceee-cCccccCC---cCCCCCCCCCccch
Q 030772 109 ANRCSFCRKRIGLT--GFKCR-CEQTFCSL---HRYSDKHNCVFDYK 149 (171)
Q Consensus 109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~---HRy~e~H~C~fDyk 149 (171)
...|..|+++.+++ -..|| ||.+||+. |+.+..--|..=|.
T Consensus 19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~ 65 (120)
T 1y02_A 19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR 65 (120)
T ss_dssp -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence 47899999999986 48999 99999875 46555555664444
No 24
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=81.91 E-value=0.53 Score=40.32 Aligned_cols=42 Identities=17% Similarity=0.365 Sum_probs=27.9
Q ss_pred CCCCccccccccc-ccc--cceee-cCccccCCcCCCCCCCCCccch
Q 030772 107 RPANRCSFCRKRI-GLT--GFKCR-CEQTFCSLHRYSDKHNCVFDYK 149 (171)
Q Consensus 107 ~~~~rC~~C~kkv-gl~--gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk 149 (171)
..+..|..|++.+ |+. |++|| ||.++|..-.-.=. .|.-+.-
T Consensus 355 ~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~-~C~~~~~ 400 (406)
T 2vrw_B 355 EETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP-PCGRHGQ 400 (406)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC-CC-----
T ss_pred CCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC-CCCCCch
Confidence 3578999999988 674 89999 99999976432112 3876644
No 25
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=81.11 E-value=0.31 Score=41.91 Aligned_cols=27 Identities=26% Similarity=0.619 Sum_probs=0.0
Q ss_pred CCcccccccccccc--cceee-cCccccCC
Q 030772 109 ANRCSFCRKRIGLT--GFKCR-CEQTFCSL 135 (171)
Q Consensus 109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~ 135 (171)
...|..|+++.+++ ...|| ||.+||+.
T Consensus 375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~ 404 (434)
T 3mpx_A 375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRN 404 (434)
T ss_dssp ------------------------------
T ss_pred CCcCCCcCCCCCCcchhhhcccCcCEeehh
Confidence 57899999999986 59999 99999865
No 26
>2eqf_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=80.41 E-value=0.72 Score=29.48 Aligned_cols=24 Identities=33% Similarity=0.791 Sum_probs=21.6
Q ss_pred cccCCCCCCCcCCCcchhhhhHHH
Q 030772 24 CANNCGFFGSANTNNLCSKCYKDY 47 (171)
Q Consensus 24 C~ngCGFfGs~at~nlCSkCyr~~ 47 (171)
++-+|..|||.-.+++|..||.-.
T Consensus 13 ~apgCdhygN~kc~GyCNeC~~fK 36 (46)
T 2eqf_A 13 RAPACDHFGNAKCNGYCNECFQFK 36 (46)
T ss_dssp SSTTCCSCCBGGGTBSCHHHHHHH
T ss_pred cCcccccccchhhhhhhHHHHhhH
Confidence 477999999999999999999754
No 27
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=78.35 E-value=0.65 Score=30.90 Aligned_cols=24 Identities=38% Similarity=0.851 Sum_probs=19.7
Q ss_pred CCCccccccccccc--ccceee-cCcc
Q 030772 108 PANRCSFCRKRIGL--TGFKCR-CEQT 131 (171)
Q Consensus 108 ~~~rC~~C~kkvgl--~gf~Cr-Cg~~ 131 (171)
.+..|..|++++++ .+++|+ |+.+
T Consensus 18 ~~~~C~~Cg~~i~~gkq~~kC~dC~~~ 44 (61)
T 4b6d_A 18 KPESCVPCGKRIKFGKLSLKCRDCRVV 44 (61)
T ss_dssp SCEECTTTCCEECTTCEEEEESSSSCE
T ss_pred CCcccccccCEEEEeeEeeECCCCCCe
Confidence 46899999999987 589999 8643
No 28
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=74.72 E-value=1.2 Score=32.86 Aligned_cols=30 Identities=30% Similarity=0.753 Sum_probs=23.5
Q ss_pred CCcccccccccccccceee-cCccccCCcCCCCCC
Q 030772 109 ANRCSFCRKRIGLTGFKCR-CEQTFCSLHRYSDKH 142 (171)
Q Consensus 109 ~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H 142 (171)
..+|..|...-++ +.|- ||+++|+ ||+..|
T Consensus 24 ~~~C~~C~~~~~~--W~CL~CG~vgCg--r~~~~H 54 (109)
T 3c5k_A 24 TQPCGDCGTIQEN--WVCLSCYQVYCG--RYINGH 54 (109)
T ss_dssp TCCCTTTCCCSSE--EEETTTCCEEEC--TTTTCH
T ss_pred CCcCccccCCCCe--eeeeecCccccC--CCcChH
Confidence 4789999987665 6688 9999998 565555
No 29
>2eqg_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=69.61 E-value=4.3 Score=26.18 Aligned_cols=23 Identities=43% Similarity=0.801 Sum_probs=20.8
Q ss_pred cCCCCCCCcCCCcchhhhhHHHH
Q 030772 26 NNCGFFGSANTNNLCSKCYKDYL 48 (171)
Q Consensus 26 ngCGFfGs~at~nlCSkCyr~~~ 48 (171)
-+|-||=|-.|+-+|-.||...+
T Consensus 17 PnCpF~mSVnTQP~CHEC~errq 39 (49)
T 2eqg_A 17 PNCPFFMSVNTQPLCHECSERRQ 39 (49)
T ss_dssp TTCCSBCCTTTTTSCHHHHHHHH
T ss_pred CCCCeEEEecCccchHHHHHHHh
Confidence 48999999999999999998664
No 30
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=64.05 E-value=3.3 Score=30.79 Aligned_cols=26 Identities=19% Similarity=0.402 Sum_probs=18.1
Q ss_pred ccccccceee-cCccccCCcCCCCCCCCC
Q 030772 118 RIGLTGFKCR-CEQTFCSLHRYSDKHNCV 145 (171)
Q Consensus 118 kvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~ 145 (171)
+|-+..++|+ ||++| .-+......|+
T Consensus 62 ~L~v~p~~C~~CG~~F--~~~~~kPsrCP 88 (105)
T 2gmg_A 62 VLLIKPAQCRKCGFVF--KAEINIPSRCP 88 (105)
T ss_dssp EEEECCCBBTTTCCBC--CCCSSCCSSCS
T ss_pred EEEEECcChhhCcCee--cccCCCCCCCc
Confidence 4666789999 99999 33455555565
No 31
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=60.69 E-value=3.9 Score=26.95 Aligned_cols=29 Identities=31% Similarity=0.823 Sum_probs=23.7
Q ss_pred CCCccccccccccccc----ceee---cCccccCCc
Q 030772 108 PANRCSFCRKRIGLTG----FKCR---CEQTFCSLH 136 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~g----f~Cr---Cg~~FC~~H 136 (171)
+..+|..|+..|.+.+ ..|+ |+..||-.=
T Consensus 5 ~~k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C 40 (60)
T 1wd2_A 5 NTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVC 40 (60)
T ss_dssp CCCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSS
T ss_pred cceECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCc
Confidence 4578999999998863 8998 999999654
No 32
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=59.34 E-value=4.6 Score=24.66 Aligned_cols=24 Identities=33% Similarity=0.910 Sum_probs=18.7
Q ss_pred CCCccccccccc-cc--ccceee-cCcc
Q 030772 108 PANRCSFCRKRI-GL--TGFKCR-CEQT 131 (171)
Q Consensus 108 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~ 131 (171)
.+..|..|++.| || .|++|+ |+.+
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~ 37 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCEDCGMN 37 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CCCCcCCCCceeeccCCccCEeCCCCCe
Confidence 578899999988 34 489998 7654
No 33
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=58.92 E-value=10 Score=24.65 Aligned_cols=25 Identities=32% Similarity=0.862 Sum_probs=19.5
Q ss_pred CCCccccccccc-cc--ccceee-cCccc
Q 030772 108 PANRCSFCRKRI-GL--TGFKCR-CEQTF 132 (171)
Q Consensus 108 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 132 (171)
.+..|..|++.| || -|++|+ |+.+.
T Consensus 22 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~ 50 (65)
T 2enz_A 22 SPTFCEHCGTLLWGLARQGLKCDACGMNV 50 (65)
T ss_dssp SCCBCSSSCCBCCCSSSCSEEESSSCCEE
T ss_pred CCcCchhcChhheecCCcccccCCCCCcc
Confidence 468899999987 44 489999 87654
No 34
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=56.12 E-value=5.4 Score=27.02 Aligned_cols=23 Identities=26% Similarity=0.631 Sum_probs=18.7
Q ss_pred CCCcccccccccccc---cceee-cCc
Q 030772 108 PANRCSFCRKRIGLT---GFKCR-CEQ 130 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~---gf~Cr-Cg~ 130 (171)
-.-+|..|+..+.|. +.+|+ ||+
T Consensus 20 v~Y~C~~Cg~~~~l~~~~~iRC~~CG~ 46 (63)
T 3h0g_L 20 MIYLCADCGARNTIQAKEVIRCRECGH 46 (63)
T ss_dssp CCCBCSSSCCBCCCCSSSCCCCSSSCC
T ss_pred eEEECCCCCCeeecCCCCceECCCCCc
Confidence 469999999999985 58897 754
No 35
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=54.58 E-value=5.2 Score=36.12 Aligned_cols=40 Identities=18% Similarity=0.431 Sum_probs=29.0
Q ss_pred CCCCccccccccc-ccc--cceee-cCccccCCcCCCCCCCCCcc
Q 030772 107 RPANRCSFCRKRI-GLT--GFKCR-CEQTFCSLHRYSDKHNCVFD 147 (171)
Q Consensus 107 ~~~~rC~~C~kkv-gl~--gf~Cr-Cg~~FC~~HRy~e~H~C~fD 147 (171)
..+..|..|++.+ ||. |++|+ ||...|....-.= -.|...
T Consensus 527 ~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v-~~C~~~ 570 (587)
T 3ky9_A 527 EETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV-PPCGRH 570 (587)
T ss_dssp SSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS-CCC---
T ss_pred CCCcccccccccccccccCCcCCCCCCCccchhhhhcC-CCCCCC
Confidence 3578999999987 775 89999 9999987755433 367544
No 36
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.93 E-value=5.9 Score=27.14 Aligned_cols=25 Identities=40% Similarity=1.083 Sum_probs=20.0
Q ss_pred CCCccccccccc-cc--ccceee-cCccc
Q 030772 108 PANRCSFCRKRI-GL--TGFKCR-CEQTF 132 (171)
Q Consensus 108 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 132 (171)
.+..|..|++.| || .|++|+ |+.++
T Consensus 27 ~pt~C~~C~~~lwGl~kqg~~C~~C~~~~ 55 (83)
T 2yuu_A 27 QPTFCSVCKDFVWGLNKQGYKCRQCNAAI 55 (83)
T ss_dssp SCCCCSSSCCCCCSSSCCEEEETTTCCEE
T ss_pred CCcChhhcChhhccccccccccCCcCCee
Confidence 578999999988 44 489999 87664
No 37
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=53.75 E-value=3.8 Score=27.22 Aligned_cols=13 Identities=31% Similarity=0.629 Sum_probs=11.1
Q ss_pred CCccccccccccc
Q 030772 109 ANRCSFCRKRIGL 121 (171)
Q Consensus 109 ~~rC~~C~kkvgl 121 (171)
|.||++|+|-||-
T Consensus 3 PVRCFTCGkvi~~ 15 (55)
T 1ef4_A 3 PVRCLSCGKPVSA 15 (55)
T ss_dssp SSSCSCTTSCCHH
T ss_pred CeecCCCCCChhH
Confidence 6899999998764
No 38
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=53.65 E-value=4.3 Score=25.87 Aligned_cols=22 Identities=32% Similarity=0.969 Sum_probs=17.8
Q ss_pred Ccccccccccccccceee-cCccc
Q 030772 110 NRCSFCRKRIGLTGFKCR-CEQTF 132 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~Cr-Cg~~F 132 (171)
..|..|++.| ..|++|+ |++.+
T Consensus 15 t~C~~C~k~i-~~G~kC~~Ck~~c 37 (49)
T 1kbe_A 15 QVCNVCQKSM-IFGVKCKHCRLKC 37 (49)
T ss_dssp CCCSSSCCSS-CCEEEETTTTEEE
T ss_pred cCccccCcee-ECcCCCCCCCCcc
Confidence 6799999988 4789999 77654
No 39
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=53.09 E-value=5.7 Score=28.00 Aligned_cols=23 Identities=26% Similarity=0.873 Sum_probs=18.2
Q ss_pred CCccccccccc----ccccceee-cCcc
Q 030772 109 ANRCSFCRKRI----GLTGFKCR-CEQT 131 (171)
Q Consensus 109 ~~rC~~C~kkv----gl~gf~Cr-Cg~~ 131 (171)
..+|..|+|.+ +|.||+|. |+.+
T Consensus 38 ~s~C~vC~k~c~s~~~L~g~rC~WCq~~ 65 (84)
T 1r79_A 38 SAKCTVCDKTCGSVLRLQDWRCLWCKAM 65 (84)
T ss_dssp TCBCSSSCCBCCCTTTCCCEEESSSCCE
T ss_pred CCEeCCCCCEeCCccCCCCCCCcccChh
Confidence 37999999985 46799999 7654
No 40
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=51.60 E-value=4.8 Score=27.94 Aligned_cols=14 Identities=36% Similarity=0.579 Sum_probs=11.9
Q ss_pred CCCccccccccccc
Q 030772 108 PANRCSFCRKRIGL 121 (171)
Q Consensus 108 ~~~rC~~C~kkvgl 121 (171)
.|.||++|+|-||-
T Consensus 3 iPVRCFTCGkvi~~ 16 (70)
T 1twf_J 3 VPVRCFSCGKVVGD 16 (70)
T ss_dssp CCSBCTTTCCBCTT
T ss_pred CCeecCCCCCChHH
Confidence 36899999998875
No 41
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=51.14 E-value=4.3 Score=27.04 Aligned_cols=25 Identities=24% Similarity=0.744 Sum_probs=20.5
Q ss_pred Cccccccccccccc-ceee-cCccccC
Q 030772 110 NRCSFCRKRIGLTG-FKCR-CEQTFCS 134 (171)
Q Consensus 110 ~rC~~C~kkvgl~g-f~Cr-Cg~~FC~ 134 (171)
..|+.|.+.+.-.+ |.|. |+..||.
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~ 42 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCV 42 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCH
T ss_pred CcccccCcccCCCccEECCccCcCccc
Confidence 35999999985544 9998 9999985
No 42
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=50.35 E-value=7.3 Score=26.29 Aligned_cols=25 Identities=20% Similarity=0.658 Sum_probs=20.6
Q ss_pred CCCCcccccccccccccceee-cCcc
Q 030772 107 RPANRCSFCRKRIGLTGFKCR-CEQT 131 (171)
Q Consensus 107 ~~~~rC~~C~kkvgl~gf~Cr-Cg~~ 131 (171)
..+..|..|+..|.-.|++|+ ||++
T Consensus 33 ~~pt~C~~C~~~l~~qG~kC~~C~~~ 58 (72)
T 2fnf_X 33 GGPGWCDLCGREVLRQALRCANCKFT 58 (72)
T ss_dssp SSCCBCTTTSSBCSSCCEECTTSSCE
T ss_pred CCCcchhhhhHHHHhCcCccCCCCCe
Confidence 457899999999955699999 8765
No 43
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=49.95 E-value=7.7 Score=25.20 Aligned_cols=24 Identities=33% Similarity=0.910 Sum_probs=18.7
Q ss_pred CCCccccccccc-cc--ccceee-cCcc
Q 030772 108 PANRCSFCRKRI-GL--TGFKCR-CEQT 131 (171)
Q Consensus 108 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~ 131 (171)
.+..|..|++.| || -|++|+ |+.+
T Consensus 19 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 46 (65)
T 3uej_A 19 SPTFCDHCGSLLWGLVKQGLKCEDCGMN 46 (65)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CCCcccccChhhhccCceeeECCCCCCe
Confidence 478999999987 55 489998 7654
No 44
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=47.60 E-value=12 Score=25.03 Aligned_cols=29 Identities=21% Similarity=0.409 Sum_probs=17.3
Q ss_pred Cccccccccccccccee--ecCccccCCcCC
Q 030772 110 NRCSFCRKRIGLTGFKC--RCEQTFCSLHRY 138 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~C--rCg~~FC~~HRy 138 (171)
-+|..|++.|....|.. +=|.+||..|-.
T Consensus 43 F~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~ 73 (82)
T 2co8_A 43 FRCHTCEATLWPGGYEQHPGDGHFYCLQHLP 73 (82)
T ss_dssp CBCSSSCCBCCTTSEECCTTTCCCEETTTCC
T ss_pred CEEcCCCCCcCCCceeEeCcCCEEEChHHHH
Confidence 45666666666555543 456677766653
No 45
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=47.28 E-value=5.7 Score=24.48 Aligned_cols=24 Identities=33% Similarity=0.902 Sum_probs=19.4
Q ss_pred CCCcccccccccccccceee-cCccc
Q 030772 108 PANRCSFCRKRIGLTGFKCR-CEQTF 132 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~gf~Cr-Cg~~F 132 (171)
.+..|..|++.|- -|++|+ |+...
T Consensus 13 ~pt~C~~C~~~l~-qG~~C~~C~~~~ 37 (52)
T 1faq_A 13 KLAFCDICQKFLL-NGFRCQTCGYKF 37 (52)
T ss_dssp SCEECTTSSSEEC-SEEECTTTTCCB
T ss_pred CCcCCCCcccccc-cCCEeCCCCCeE
Confidence 4689999999875 799999 76654
No 46
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=45.87 E-value=6.5 Score=25.41 Aligned_cols=25 Identities=20% Similarity=0.658 Sum_probs=20.1
Q ss_pred CCCCcccccccccccccceee-cCcc
Q 030772 107 RPANRCSFCRKRIGLTGFKCR-CEQT 131 (171)
Q Consensus 107 ~~~~rC~~C~kkvgl~gf~Cr-Cg~~ 131 (171)
..+..|..|++.|.-.|++|+ |+.+
T Consensus 20 ~~pt~C~~C~~~i~kqg~kC~~C~~~ 45 (59)
T 1rfh_A 20 GGPGWCDLCGREVLRQALRCANCKFT 45 (59)
T ss_dssp SCCEECTTTCSEECSCCEECTTTSCE
T ss_pred CCCeEchhcchhhhhCccEeCCCCCe
Confidence 457899999999944699999 7654
No 47
>4ayb_N DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_N 2y0s_N 2waq_N 4b1o_N 4b1p_O 2pmz_N 3hkz_N
Probab=44.23 E-value=6.5 Score=26.99 Aligned_cols=13 Identities=31% Similarity=0.452 Sum_probs=10.8
Q ss_pred CCccccccccccc
Q 030772 109 ANRCSFCRKRIGL 121 (171)
Q Consensus 109 ~~rC~~C~kkvgl 121 (171)
|-||++|+|-||-
T Consensus 4 PVRCFTCGkvi~~ 16 (66)
T 4ayb_N 4 PIRCFTCGSLIAD 16 (66)
T ss_dssp CSBCTTTCCBCHH
T ss_pred CcccCCCcHhHHH
Confidence 6899999997764
No 48
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.61 E-value=18 Score=24.79 Aligned_cols=43 Identities=23% Similarity=0.529 Sum_probs=29.5
Q ss_pred CCCccccccccc-cc--ccceee-cCccccCCcCCCCCCCCCccchH
Q 030772 108 PANRCSFCRKRI-GL--TGFKCR-CEQTFCSLHRYSDKHNCVFDYKS 150 (171)
Q Consensus 108 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~ 150 (171)
.+..|..|++.| || .|++|+ |+..+=......=...|..++.+
T Consensus 27 ~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~~~e 73 (85)
T 2eli_A 27 SPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLCGMDHTE 73 (85)
T ss_dssp SCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSCSCCCCCCCC
T ss_pred CCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcCCcCCcchhh
Confidence 578899999987 44 489999 87775333333334578877763
No 49
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=41.18 E-value=13 Score=24.32 Aligned_cols=24 Identities=25% Similarity=0.793 Sum_probs=18.8
Q ss_pred CCCccccccccc-cc--ccceee-cCcc
Q 030772 108 PANRCSFCRKRI-GL--TGFKCR-CEQT 131 (171)
Q Consensus 108 ~~~rC~~C~kkv-gl--~gf~Cr-Cg~~ 131 (171)
.+..|..|++.| || .|++|+ |+.+
T Consensus 23 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 50 (66)
T 1y8f_A 23 TPTYCYECEGLLWGIARQGMRCTECGVK 50 (66)
T ss_dssp SCCCCTTTCCCCCSSCCEEEEETTTCCE
T ss_pred CCcChhhcChhhcccCcceeEcCCCCCe
Confidence 468899999988 44 489999 7655
No 50
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=40.85 E-value=15 Score=22.80 Aligned_cols=28 Identities=18% Similarity=0.661 Sum_probs=18.8
Q ss_pred CCCCccccccccccc--------------ccceee-cCccccC
Q 030772 107 RPANRCSFCRKRIGL--------------TGFKCR-CEQTFCS 134 (171)
Q Consensus 107 ~~~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC~ 134 (171)
..+-.|..|++.... ..|.|. ||..|-.
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~ 57 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNR 57 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESC
T ss_pred CCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCC
Confidence 346889999887542 147887 7776643
No 51
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=40.61 E-value=7.4 Score=24.57 Aligned_cols=27 Identities=15% Similarity=0.237 Sum_probs=16.5
Q ss_pred CcccccccccccccceeecCccccCCc
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSLH 136 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 136 (171)
-+|..|++.|....|.=+=|..||..|
T Consensus 40 F~C~~C~~~L~~~~~~~~~g~~yC~~~ 66 (72)
T 3f6q_B 40 FVCAQCFQQFPEGLFYEFEGRKYCEHD 66 (72)
T ss_dssp SSCTTTCCCCGGGCCEEETTEEECHHH
T ss_pred CcccCCCCCCCCCCeEeECCeEeCHHH
Confidence 456677777665555555566666554
No 52
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=39.44 E-value=9 Score=24.86 Aligned_cols=24 Identities=25% Similarity=0.434 Sum_probs=20.5
Q ss_pred CCCcccccccccccccceee-cCcc
Q 030772 108 PANRCSFCRKRIGLTGFKCR-CEQT 131 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~gf~Cr-Cg~~ 131 (171)
.+..|..|+.+++.---.|| ||++
T Consensus 13 ~k~iCpkC~a~~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 13 KKYVCLRCGATNPWGAKKCRKCGYK 37 (51)
T ss_dssp SEEECTTTCCEECTTCSSCSSSSSC
T ss_pred CCccCCCCCCcCCCCceecCCCCCc
Confidence 46789999999888778999 9887
No 53
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=38.24 E-value=15 Score=23.86 Aligned_cols=28 Identities=21% Similarity=0.450 Sum_probs=21.3
Q ss_pred CcccccccccccccceeecCccccCCcC
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSLHR 137 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~HR 137 (171)
-+|..|++.|....|.=+=|.+||..|-
T Consensus 36 F~C~~C~~~L~~~~f~~~~g~~yC~~cy 63 (76)
T 1x68_A 36 FNCGKCSVSLVGKGFLTQNKEIFCQKCG 63 (76)
T ss_dssp CBCTTTCCBCSSSCEEEETTEEEETTTT
T ss_pred CChhhCCCcCCCCceEeECCEEECHHHh
Confidence 5777888887766677778888887764
No 54
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=38.20 E-value=10 Score=25.69 Aligned_cols=26 Identities=35% Similarity=0.990 Sum_probs=19.9
Q ss_pred CCCCccccccccc-cc--ccceee-cCccc
Q 030772 107 RPANRCSFCRKRI-GL--TGFKCR-CEQTF 132 (171)
Q Consensus 107 ~~~~rC~~C~kkv-gl--~gf~Cr-Cg~~F 132 (171)
..+..|..|++-| || -|++|+ |+...
T Consensus 32 ~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~ 61 (77)
T 2enn_A 32 PQPTFCSVCHEFVWGLNKQGYQCRQCNAAI 61 (77)
T ss_dssp SSCEECSSSCCEECCTTCCEEECSSSCCEE
T ss_pred CCCcCccccChhhccccccccCcCCCCCcC
Confidence 3578999999987 44 489999 76654
No 55
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=37.77 E-value=9.9 Score=24.20 Aligned_cols=27 Identities=26% Similarity=0.541 Sum_probs=18.8
Q ss_pred CCCcccccccccccc--------------cceee-cCccccC
Q 030772 108 PANRCSFCRKRIGLT--------------GFKCR-CEQTFCS 134 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~--------------gf~Cr-Cg~~FC~ 134 (171)
+|-.|..|+|..... .|.|. ||..|-.
T Consensus 3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~ 44 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRD 44 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESS
T ss_pred CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCC
Confidence 457788888765431 58888 8888754
No 56
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.16 E-value=25 Score=22.32 Aligned_cols=48 Identities=17% Similarity=0.358 Sum_probs=28.3
Q ss_pred CCCcccccccccccccceeecCccccCCc--C-CCCCCCCCccchHhhHHHH
Q 030772 108 PANRCSFCRKRIGLTGFKCRCEQTFCSLH--R-YSDKHNCVFDYKSAGQDAI 156 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~gf~CrCg~~FC~~H--R-y~e~H~C~fDyk~~gr~~l 156 (171)
....|..|...+.. ...-.||++||..= + +.....|.+--+...++.|
T Consensus 14 ~~~~C~IC~~~~~~-~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 64 (71)
T 2d8t_A 14 TVPECAICLQTCVH-PVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFL 64 (71)
T ss_dssp SCCBCSSSSSBCSS-EEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHHHH
T ss_pred CCCCCccCCcccCC-CEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHhhc
Confidence 35789999876533 34447999998532 1 2334567765554444433
No 57
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=35.36 E-value=12 Score=26.97 Aligned_cols=20 Identities=45% Similarity=0.748 Sum_probs=17.5
Q ss_pred cceeecCccccCCcCCCCCC
Q 030772 123 GFKCRCEQTFCSLHRYSDKH 142 (171)
Q Consensus 123 gf~CrCg~~FC~~HRy~e~H 142 (171)
=|+|.|++..=+.+|||..|
T Consensus 48 FFkC~C~~Rt~sl~r~P~~~ 67 (92)
T 2kwq_A 48 FFKCPCGNRTISLDRLPKKH 67 (92)
T ss_dssp EEECTTSCEEEESSSSCCSC
T ss_pred EEECCCCCceeEeeeCCCCC
Confidence 39999999999999999864
No 58
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=35.16 E-value=15 Score=26.86 Aligned_cols=27 Identities=26% Similarity=0.695 Sum_probs=21.3
Q ss_pred Ccccccccccccccceee-cCccccCCcCCC
Q 030772 110 NRCSFCRKRIGLTGFKCR-CEQTFCSLHRYS 139 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~ 139 (171)
-+|..|+|... |.|. |...||..|...
T Consensus 59 c~C~~C~k~~~---~~C~~Cp~sfC~~c~~g 86 (107)
T 4gne_A 59 HQCDECSSAAV---SFCEFCPHSFCKDHEKG 86 (107)
T ss_dssp GBCTTTCSBCC---EECSSSSCEECTTTCTT
T ss_pred CCCCcCCCCCC---cCcCCCCcchhhhccCC
Confidence 46778888643 8999 999999998743
No 59
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=34.44 E-value=10 Score=24.10 Aligned_cols=27 Identities=22% Similarity=0.575 Sum_probs=17.8
Q ss_pred CcccccccccccccceeecCccccCCc
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSLH 136 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 136 (171)
-+|..|++.|.-..|.=+=|..||..|
T Consensus 32 F~C~~C~~~L~~~~f~~~~g~~yC~~c 58 (70)
T 2d8x_A 32 FRCDLCQEVLADIGFVKNAGRHLCRPC 58 (70)
T ss_dssp SBCSSSCCBCSSSCCEEETTEEECHHH
T ss_pred CEeCCCCCcCCCCccEeECCeEECHHH
Confidence 567777777766566656666776554
No 60
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.32 E-value=31 Score=21.23 Aligned_cols=25 Identities=20% Similarity=0.553 Sum_probs=18.1
Q ss_pred CCcccccccccccccceeecCccccC
Q 030772 109 ANRCSFCRKRIGLTGFKCRCEQTFCS 134 (171)
Q Consensus 109 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 134 (171)
...|..|...+.- ...-.||++||.
T Consensus 20 ~~~C~IC~~~~~~-p~~~~CgH~fC~ 44 (63)
T 2ysj_A 20 EVICPICLDILQK-PVTIDCGHNFCL 44 (63)
T ss_dssp CCBCTTTCSBCSS-CEECTTSSEECH
T ss_pred CCCCCcCCchhCC-eEEeCCCCcchH
Confidence 5789999875543 344489999985
No 61
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=31.42 E-value=13 Score=24.73 Aligned_cols=23 Identities=26% Similarity=0.580 Sum_probs=19.8
Q ss_pred CCCcccccccccccccceee-cCc
Q 030772 108 PANRCSFCRKRIGLTGFKCR-CEQ 130 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~gf~Cr-Cg~ 130 (171)
...-|..|+.++....-.|| ||+
T Consensus 18 ~k~ICrkC~ARnp~~A~~CRKCg~ 41 (56)
T 2ayj_A 18 LKKVCRKCGALNPIRATKCRRCHS 41 (56)
T ss_dssp CCEEETTTCCEECTTCSSCTTTCC
T ss_pred chhhhccccCcCCcccccccCCCC
Confidence 46789999999999999999 874
No 62
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=31.14 E-value=23 Score=25.06 Aligned_cols=31 Identities=23% Similarity=0.526 Sum_probs=21.3
Q ss_pred CCcccccccccccccceee---cCccccCCcCCCCCC
Q 030772 109 ANRCSFCRKRIGLTGFKCR---CEQTFCSLHRYSDKH 142 (171)
Q Consensus 109 ~~rC~~C~kkvgl~gf~Cr---Cg~~FC~~HRy~e~H 142 (171)
..+|..|.+. +-.-+.|- ||+++|+. |+..|
T Consensus 25 ~~~C~~C~~~-~~~lw~CL~~~Cg~vgCgr--~~~~H 58 (97)
T 2uzg_A 25 LGTCQDCKVQ-GPNLWACLENRCSYVGCGE--SQVDH 58 (97)
T ss_dssp TTCCSSSCCC-CSSCEEECCTTCCCEECCT--TTTCH
T ss_pred CCcCcCcCCC-CCCceeeecccCCCcccCC--CcChH
Confidence 4689999853 22226777 99999996 54443
No 63
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=30.89 E-value=13 Score=25.05 Aligned_cols=23 Identities=17% Similarity=0.509 Sum_probs=9.0
Q ss_pred cccccccccccccceeecCcccc
Q 030772 111 RCSFCRKRIGLTGFKCRCEQTFC 133 (171)
Q Consensus 111 rC~~C~kkvgl~gf~CrCg~~FC 133 (171)
+|..|++.|....|.=+=|..||
T Consensus 53 ~C~~C~~~L~~~~~~~~~g~~yC 75 (89)
T 1x64_A 53 VCADCNLNLKQKGYFFVEGELYC 75 (89)
T ss_dssp CCSSSCCCTTTSCCEEETTEEEC
T ss_pred EecCCCCCCCCCCeEeECCEEEC
Confidence 34444444433333333333444
No 64
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=30.60 E-value=16 Score=22.34 Aligned_cols=26 Identities=19% Similarity=0.648 Sum_probs=16.7
Q ss_pred CCCcccccccccc-----------cccceee-cCcccc
Q 030772 108 PANRCSFCRKRIG-----------LTGFKCR-CEQTFC 133 (171)
Q Consensus 108 ~~~rC~~C~kkvg-----------l~gf~Cr-Cg~~FC 133 (171)
.+-.|..|++... -..|.|. ||..|-
T Consensus 13 k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~ 50 (62)
T 1vd4_A 13 ASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVE 50 (62)
T ss_dssp SEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCE
T ss_pred CCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccc
Confidence 4577888887422 1248887 777763
No 65
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.49 E-value=36 Score=21.34 Aligned_cols=25 Identities=20% Similarity=0.553 Sum_probs=18.1
Q ss_pred CCcccccccccccccceeecCccccC
Q 030772 109 ANRCSFCRKRIGLTGFKCRCEQTFCS 134 (171)
Q Consensus 109 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 134 (171)
...|..|...+.- ...-.||++||.
T Consensus 20 ~~~C~IC~~~~~~-~~~~~CgH~fC~ 44 (73)
T 2ysl_A 20 EVICPICLDILQK-PVTIDCGHNFCL 44 (73)
T ss_dssp CCBCTTTCSBCSS-EEECTTCCEEEH
T ss_pred CCEeccCCcccCC-eEEcCCCChhhH
Confidence 5789999876543 333489999996
No 66
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=30.37 E-value=13 Score=23.29 Aligned_cols=27 Identities=22% Similarity=0.319 Sum_probs=17.2
Q ss_pred CcccccccccccccceeecCccccCCc
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSLH 136 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 136 (171)
-+|..|++.|.-..|.=+=|..||..|
T Consensus 32 F~C~~C~~~L~~~~~~~~~g~~yC~~~ 58 (66)
T 1nyp_A 32 FVCAKCEKPFLGHRHYERKGLAYCETH 58 (66)
T ss_dssp CBCTTTCCBCSSSCCEEETTEEECHHH
T ss_pred CEECCCCCCCCCCceEeECCcEECHHH
Confidence 466777777665556666666666544
No 67
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.35 E-value=18 Score=18.94 Aligned_cols=11 Identities=45% Similarity=0.893 Sum_probs=5.8
Q ss_pred cceee-cCcccc
Q 030772 123 GFKCR-CEQTFC 133 (171)
Q Consensus 123 gf~Cr-Cg~~FC 133 (171)
.|.|. ||..|-
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2elq_A 9 PFKCSLCEYATR 20 (36)
T ss_dssp SEECSSSSCEES
T ss_pred CccCCCCCchhC
Confidence 45555 555553
No 68
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.30 E-value=49 Score=19.62 Aligned_cols=25 Identities=24% Similarity=0.635 Sum_probs=18.1
Q ss_pred CCcccccccccccccceeecCccccC
Q 030772 109 ANRCSFCRKRIGLTGFKCRCEQTFCS 134 (171)
Q Consensus 109 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 134 (171)
...|..|...+.. ...-.||++||.
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~ 39 (58)
T 2ecj_A 15 EASCSVCLEYLKE-PVIIECGHNFCK 39 (58)
T ss_dssp CCBCSSSCCBCSS-CCCCSSCCCCCH
T ss_pred CCCCccCCcccCc-cEeCCCCCccCH
Confidence 4689999876543 344579999985
No 69
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=30.18 E-value=20 Score=20.77 Aligned_cols=11 Identities=36% Similarity=0.972 Sum_probs=6.7
Q ss_pred CCccccccccc
Q 030772 109 ANRCSFCRKRI 119 (171)
Q Consensus 109 ~~rC~~C~kkv 119 (171)
+-.|..|++..
T Consensus 4 ~~~C~~C~~~f 14 (57)
T 3uk3_C 4 SRECSYCGKFF 14 (57)
T ss_dssp -CBCTTTCCBC
T ss_pred CccCCCCcchh
Confidence 45677777654
No 70
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=30.12 E-value=21 Score=20.65 Aligned_cols=11 Identities=27% Similarity=0.936 Sum_probs=6.2
Q ss_pred cceee-cCcccc
Q 030772 123 GFKCR-CEQTFC 133 (171)
Q Consensus 123 gf~Cr-Cg~~FC 133 (171)
.|.|. ||..|-
T Consensus 29 ~~~C~~C~~~f~ 40 (57)
T 1bbo_A 29 PYHCTYCNFSFK 40 (57)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCCCchhc
Confidence 36666 555553
No 71
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=29.90 E-value=16 Score=17.58 Aligned_cols=11 Identities=45% Similarity=1.334 Sum_probs=5.8
Q ss_pred ceee-cCccccC
Q 030772 124 FKCR-CEQTFCS 134 (171)
Q Consensus 124 f~Cr-Cg~~FC~ 134 (171)
|.|. ||..|-.
T Consensus 2 ~~C~~C~k~f~~ 13 (27)
T 1znf_A 2 YKCGLCERSFVE 13 (27)
T ss_dssp CBCSSSCCBCSS
T ss_pred ccCCCCCCcCCC
Confidence 4555 6555543
No 72
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=29.88 E-value=21 Score=20.94 Aligned_cols=10 Identities=20% Similarity=0.703 Sum_probs=5.6
Q ss_pred Cccccccccc
Q 030772 110 NRCSFCRKRI 119 (171)
Q Consensus 110 ~rC~~C~kkv 119 (171)
-.|..|++..
T Consensus 3 ~~C~~C~~~f 12 (60)
T 2adr_A 3 FVCEVCTRAF 12 (60)
T ss_dssp BCCTTTCCCB
T ss_pred CcCCCCcccc
Confidence 4566666543
No 73
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.57 E-value=14 Score=23.78 Aligned_cols=26 Identities=15% Similarity=0.241 Sum_probs=13.4
Q ss_pred CcccccccccccccceeecCccccCC
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSL 135 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~ 135 (171)
-+|..|++.|....|.=+=|..||..
T Consensus 40 F~C~~C~~~L~~~~~~~~~g~~yC~~ 65 (77)
T 1g47_A 40 FVCAQCFQQFPEGLFYEFEGRKYCEH 65 (77)
T ss_dssp CCCTTTCCCCGGGCSEEETTEEECHH
T ss_pred CeECCCCCCCCCCCeEeECCeEeCHH
Confidence 34555566555544555555555543
No 74
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=29.42 E-value=37 Score=19.82 Aligned_cols=11 Identities=27% Similarity=0.531 Sum_probs=7.3
Q ss_pred CCCcccccccc
Q 030772 108 PANRCSFCRKR 118 (171)
Q Consensus 108 ~~~rC~~C~kk 118 (171)
.+-.|..|.+.
T Consensus 11 k~~~C~~C~k~ 21 (54)
T 2eps_A 11 KPYICQSCGKG 21 (54)
T ss_dssp CCEECSSSCCE
T ss_pred CCeECCCCCcc
Confidence 45677777764
No 75
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.77 E-value=15 Score=23.48 Aligned_cols=27 Identities=19% Similarity=0.374 Sum_probs=17.7
Q ss_pred CcccccccccccccceeecCccccCCc
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSLH 136 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 136 (171)
-+|..|++.|.-..|.=+=|..||..|
T Consensus 36 F~C~~C~~~L~~~~f~~~~g~~yC~~c 62 (72)
T 1x4l_A 36 FNCKKCSLSLVGRGFLTERDDILCPDC 62 (72)
T ss_dssp CBCSSSCCBCTTSCCEECSSSEECHHH
T ss_pred CEeccCCCcCCCCccEeECCEEEChhH
Confidence 467777777765556666667777544
No 76
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=28.59 E-value=16 Score=17.73 Aligned_cols=10 Identities=40% Similarity=1.271 Sum_probs=5.6
Q ss_pred ceee-cCcccc
Q 030772 124 FKCR-CEQTFC 133 (171)
Q Consensus 124 f~Cr-Cg~~FC 133 (171)
|.|. ||..|-
T Consensus 3 ~~C~~C~~~f~ 13 (29)
T 1ard_A 3 FVCEVCTRAFA 13 (29)
T ss_dssp CBCTTTCCBCS
T ss_pred eECCCCCcccC
Confidence 5565 655553
No 77
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.50 E-value=19 Score=24.01 Aligned_cols=13 Identities=15% Similarity=0.317 Sum_probs=10.1
Q ss_pred CCCcccccccccc
Q 030772 108 PANRCSFCRKRIG 120 (171)
Q Consensus 108 ~~~rC~~C~kkvg 120 (171)
.+-.|..|.|...
T Consensus 23 ~~~~C~~C~k~f~ 35 (98)
T 2gqj_A 23 GEAVCPTCNVVTR 35 (98)
T ss_dssp SCCCCTTTCCCCS
T ss_pred CCcCCCCCCCChh
Confidence 4678999988776
No 78
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.30 E-value=14 Score=23.50 Aligned_cols=26 Identities=23% Similarity=0.450 Sum_probs=12.8
Q ss_pred CcccccccccccccceeecCccccCC
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSL 135 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~ 135 (171)
-+|..|++.|....|.=+=|..||..
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~ 59 (72)
T 1x61_A 34 FVCSTCRAQLRGQHFYAVERRAYCEG 59 (72)
T ss_dssp CBCSSSCCBCTTSCEEESSSCEEEHH
T ss_pred CcccccCCcCCcCcCEeeCCeEECHH
Confidence 34556666554334444444455443
No 79
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=28.08 E-value=14 Score=26.07 Aligned_cols=15 Identities=20% Similarity=0.640 Sum_probs=11.1
Q ss_pred cccceeecCccccCC
Q 030772 121 LTGFKCRCEQTFCSL 135 (171)
Q Consensus 121 l~gf~CrCg~~FC~~ 135 (171)
...+.||||..|--.
T Consensus 21 ~y~ypCrCGd~F~it 35 (83)
T 1yop_A 21 MFTYPCPCGDRFQIY 35 (83)
T ss_dssp EEEEEETTTEEEEEE
T ss_pred EEEEeCCCCCeEEEC
Confidence 346889999988543
No 80
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.04 E-value=55 Score=20.75 Aligned_cols=26 Identities=19% Similarity=0.622 Sum_probs=18.5
Q ss_pred CCcccccccccccccceeecCccccCC
Q 030772 109 ANRCSFCRKRIGLTGFKCRCEQTFCSL 135 (171)
Q Consensus 109 ~~rC~~C~kkvgl~gf~CrCg~~FC~~ 135 (171)
...|..|...+.- ...-.||++||..
T Consensus 19 ~~~C~IC~~~~~~-p~~~~CgH~fC~~ 44 (85)
T 2ecv_A 19 EVTCPICLELLTQ-PLSLDCGHSFCQA 44 (85)
T ss_dssp CCCCTTTCSCCSS-CBCCSSSCCBCTT
T ss_pred CCCCCCCCcccCC-ceeCCCCCHHHHH
Confidence 4689999876543 3444799999964
No 81
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=27.87 E-value=40 Score=22.56 Aligned_cols=26 Identities=23% Similarity=0.783 Sum_probs=19.0
Q ss_pred CCcccccccccccc---cceeecCccccC
Q 030772 109 ANRCSFCRKRIGLT---GFKCRCEQTFCS 134 (171)
Q Consensus 109 ~~rC~~C~kkvgl~---gf~CrCg~~FC~ 134 (171)
...|..|--.+.+. -+.|.||+.||.
T Consensus 11 ~~~CpICle~~~~~d~~~~p~~CGH~fC~ 39 (78)
T 1e4u_A 11 PVECPLCMEPLEIDDINFFPCTCGYQICR 39 (78)
T ss_dssp CCBCTTTCCBCCTTTTTCCSSTTSCCCCH
T ss_pred CCcCCccCccCccccccccccCCCCCcCH
Confidence 45688888877543 355889999995
No 82
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.80 E-value=28 Score=22.70 Aligned_cols=28 Identities=21% Similarity=0.571 Sum_probs=21.5
Q ss_pred CcccccccccccccceeecCccccCCcC
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSLHR 137 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~HR 137 (171)
-+|..|++.|.-..|.=+=|..||..|-
T Consensus 44 F~C~~C~~~L~~~~f~~~~~~~~C~~c~ 71 (82)
T 2ehe_A 44 FRCCRCQRSLADEPFTCQDSELLCNDCY 71 (82)
T ss_dssp SBCTTTCCBCSSCCEEEETTEEEETTTS
T ss_pred CeecCCCCccCCCccEeeCCEEECHHHH
Confidence 5778888888766677777888887764
No 83
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=27.78 E-value=22 Score=27.51 Aligned_cols=30 Identities=20% Similarity=0.480 Sum_probs=25.8
Q ss_pred CCCcccccccccccc---cceee-cCccccCCcC
Q 030772 108 PANRCSFCRKRIGLT---GFKCR-CEQTFCSLHR 137 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~---gf~Cr-Cg~~FC~~HR 137 (171)
....|..|.+.+|++ |..|. |...+|..=+
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~ 100 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCS 100 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGE
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccc
Confidence 468999999999996 68898 9999998655
No 84
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=27.44 E-value=16 Score=17.72 Aligned_cols=10 Identities=30% Similarity=1.285 Sum_probs=5.9
Q ss_pred ceee-cCcccc
Q 030772 124 FKCR-CEQTFC 133 (171)
Q Consensus 124 f~Cr-Cg~~FC 133 (171)
|.|. ||..|-
T Consensus 4 ~~C~~C~~~f~ 14 (30)
T 2m0d_A 4 YQCDYCGRSFS 14 (30)
T ss_dssp EECTTTCCEES
T ss_pred ccCCCCCcccC
Confidence 5565 666664
No 85
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=32.87 E-value=13 Score=17.92 Aligned_cols=12 Identities=25% Similarity=0.899 Sum_probs=7.2
Q ss_pred ceee-cCccccCC
Q 030772 124 FKCR-CEQTFCSL 135 (171)
Q Consensus 124 f~Cr-Cg~~FC~~ 135 (171)
|.|. ||..|-..
T Consensus 3 ~~C~~C~k~f~~~ 15 (26)
T 2lvu_A 3 YVCERCGKRFVQS 15 (26)
Confidence 5665 66666543
No 86
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.77 E-value=27 Score=22.50 Aligned_cols=25 Identities=24% Similarity=0.539 Sum_probs=16.7
Q ss_pred CcccccccccccccceeecCccccC
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCS 134 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~ 134 (171)
-+|..|++.|....|.=+=|..||.
T Consensus 37 F~C~~C~~~L~~~~~~~~~g~~yC~ 61 (76)
T 2cu8_A 37 LKCERCSKTLTPGGHAEHDGKPFCH 61 (76)
T ss_dssp CBCSSSCCBCCTTSCEEETTEEECT
T ss_pred CCCCCCCCccCCCceEeECCEEecc
Confidence 5677777777655566666666765
No 87
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=26.56 E-value=19 Score=17.66 Aligned_cols=11 Identities=27% Similarity=1.090 Sum_probs=6.5
Q ss_pred ceee-cCccccC
Q 030772 124 FKCR-CEQTFCS 134 (171)
Q Consensus 124 f~Cr-Cg~~FC~ 134 (171)
|.|. ||..|-.
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1paa_A 3 YACGLCNRAFTR 14 (30)
T ss_dssp SBCTTTCCBCSS
T ss_pred cCCcccCcccCC
Confidence 5565 6666643
No 88
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.38 E-value=16 Score=23.14 Aligned_cols=27 Identities=30% Similarity=0.560 Sum_probs=15.1
Q ss_pred CcccccccccccccceeecCccccCCc
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSLH 136 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 136 (171)
-+|..|++.|....|.=+=|..||..|
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~c 60 (72)
T 1x4k_A 34 FICHRCQQPIGTKSFIPKDNQNFCVPC 60 (72)
T ss_dssp TCCSSSCCCCCSSSEEEETTEEEEHHH
T ss_pred CcccccCCccCCCccCccCCeEECHHH
Confidence 456666666655555555555565443
No 89
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=26.35 E-value=18 Score=17.62 Aligned_cols=11 Identities=27% Similarity=1.014 Sum_probs=6.5
Q ss_pred ceee-cCccccC
Q 030772 124 FKCR-CEQTFCS 134 (171)
Q Consensus 124 f~Cr-Cg~~FC~ 134 (171)
|.|. ||..|-.
T Consensus 4 ~~C~~C~k~f~~ 15 (28)
T 2kvf_A 4 YSCSVCGKRFSL 15 (28)
T ss_dssp EECSSSCCEESC
T ss_pred ccCCCCCcccCC
Confidence 5665 6666643
No 90
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=26.33 E-value=28 Score=26.23 Aligned_cols=31 Identities=26% Similarity=0.823 Sum_probs=25.2
Q ss_pred CCCCcccccccccccc---cceee-cCccccCCcC
Q 030772 107 RPANRCSFCRKRIGLT---GFKCR-CEQTFCSLHR 137 (171)
Q Consensus 107 ~~~~rC~~C~kkvgl~---gf~Cr-Cg~~FC~~HR 137 (171)
.....|..|.+.+|++ |..|. |...+|..=+
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~ 87 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG 87 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccC
Confidence 3468999999999975 67898 9999998543
No 91
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=26.23 E-value=17 Score=17.63 Aligned_cols=10 Identities=40% Similarity=0.896 Sum_probs=5.4
Q ss_pred ceee-cCcccc
Q 030772 124 FKCR-CEQTFC 133 (171)
Q Consensus 124 f~Cr-Cg~~FC 133 (171)
|.|. ||..|-
T Consensus 4 ~~C~~C~k~f~ 14 (27)
T 2kvh_A 4 FSCSLCPQRSR 14 (27)
T ss_dssp EECSSSSCEES
T ss_pred ccCCCcChhhC
Confidence 5555 555553
No 92
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=26.21 E-value=18 Score=17.52 Aligned_cols=10 Identities=30% Similarity=0.986 Sum_probs=5.3
Q ss_pred ceee-cCcccc
Q 030772 124 FKCR-CEQTFC 133 (171)
Q Consensus 124 f~Cr-Cg~~FC 133 (171)
|.|. ||..|-
T Consensus 3 ~~C~~C~k~f~ 13 (30)
T 1klr_A 3 YQCQYCEFRSA 13 (30)
T ss_dssp CCCSSSSCCCS
T ss_pred ccCCCCCCccC
Confidence 4555 555554
No 93
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.13 E-value=46 Score=21.78 Aligned_cols=24 Identities=25% Similarity=0.899 Sum_probs=19.8
Q ss_pred CCcccccccccccccceee-cCccccCC
Q 030772 109 ANRCSFCRKRIGLTGFKCR-CEQTFCSL 135 (171)
Q Consensus 109 ~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~ 135 (171)
...|..|+. ..-|+|- |+..||+.
T Consensus 12 ~~~C~vC~~---~~kY~CPrC~~~yCSl 36 (56)
T 2yqq_A 12 TVVCVICLE---KPKYRCPACRVPYCSV 36 (56)
T ss_dssp CCCCTTTCS---CCSEECTTTCCEESSH
T ss_pred CCccCcCcC---CCeeeCCCCCCCeeCH
Confidence 457999988 5678997 99999985
No 94
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=26.02 E-value=16 Score=26.20 Aligned_cols=12 Identities=25% Similarity=0.717 Sum_probs=9.8
Q ss_pred cccceeecCccc
Q 030772 121 LTGFKCRCEQTF 132 (171)
Q Consensus 121 l~gf~CrCg~~F 132 (171)
...+.||||..|
T Consensus 21 ~y~ypCrCGd~F 32 (89)
T 2jr7_A 21 TYFYPCPCGDNF 32 (89)
T ss_dssp EEEEECTTSSEE
T ss_pred EEEEcCCCCCEE
Confidence 346889999988
No 95
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=25.90 E-value=18 Score=23.64 Aligned_cols=27 Identities=22% Similarity=0.468 Sum_probs=14.0
Q ss_pred CcccccccccccccceeecCccccCCc
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSLH 136 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 136 (171)
-+|..|++.|....|.=+=|..||..|
T Consensus 35 F~C~~C~~~L~~~~~~~~~~~~yC~~c 61 (81)
T 1a7i_A 35 FLCMVCRKNLDSTTVAIHDAEVYCKSC 61 (81)
T ss_dssp EECSSSCCEECSSCCEEETTEEECSHH
T ss_pred CccCCCCCCCCCCCeEeeCCEEECHHH
Confidence 345566665554445555455555443
No 96
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.83 E-value=11 Score=24.77 Aligned_cols=26 Identities=19% Similarity=0.425 Sum_probs=12.8
Q ss_pred CcccccccccccccceeecCccccCC
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSL 135 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~ 135 (171)
-+|..|++.|.-..|.=+=|..||..
T Consensus 42 F~C~~C~~~L~~~~~~~~~g~~yC~~ 67 (79)
T 1x62_A 42 YVCTDCGTNLKQKGHFFVEDQIYCEK 67 (79)
T ss_dssp TSCSSSCCCHHHHCCEESSSCEECHH
T ss_pred CeeCCCCCCCCCCCeEeECCEEECHH
Confidence 34555566554434444445555543
No 97
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.64 E-value=25 Score=18.37 Aligned_cols=10 Identities=40% Similarity=1.374 Sum_probs=5.4
Q ss_pred cceee-cCccc
Q 030772 123 GFKCR-CEQTF 132 (171)
Q Consensus 123 gf~Cr-Cg~~F 132 (171)
.|.|. ||..|
T Consensus 9 ~~~C~~C~k~f 19 (37)
T 2elo_A 9 SYSCPVCEKSF 19 (37)
T ss_dssp CCEETTTTEEC
T ss_pred CcCCCCCCCcc
Confidence 45555 55555
No 98
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=25.64 E-value=24 Score=21.77 Aligned_cols=12 Identities=25% Similarity=0.501 Sum_probs=8.5
Q ss_pred CCCccccccccc
Q 030772 108 PANRCSFCRKRI 119 (171)
Q Consensus 108 ~~~rC~~C~kkv 119 (171)
.+-.|..|.+..
T Consensus 13 k~~~C~~C~k~f 24 (72)
T 1x6e_A 13 KPYGCVECGKAF 24 (72)
T ss_dssp CCEECSSSCCEE
T ss_pred CCccCCCCCCcc
Confidence 457788887754
No 99
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.63 E-value=48 Score=21.46 Aligned_cols=25 Identities=28% Similarity=0.728 Sum_probs=17.7
Q ss_pred CCcccccccccccccceeecCccccC
Q 030772 109 ANRCSFCRKRIGLTGFKCRCEQTFCS 134 (171)
Q Consensus 109 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 134 (171)
...|..|...+.- ...-.||++||.
T Consensus 15 ~~~C~IC~~~~~~-p~~~~CgH~fC~ 39 (81)
T 2csy_A 15 PFRCFICRQAFQN-PVVTKCRHYFCE 39 (81)
T ss_dssp CSBCSSSCSBCCS-EEECTTSCEEEH
T ss_pred CCCCcCCCchhcC-eeEccCCCHhHH
Confidence 5689999776533 344579999985
No 100
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=25.56 E-value=20 Score=17.24 Aligned_cols=11 Identities=36% Similarity=1.056 Sum_probs=6.5
Q ss_pred ceee-cCccccC
Q 030772 124 FKCR-CEQTFCS 134 (171)
Q Consensus 124 f~Cr-Cg~~FC~ 134 (171)
|.|. ||..|..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 2m0e_A 3 HKCPHCDKKFNQ 14 (29)
T ss_dssp CCCSSCCCCCCT
T ss_pred CcCCCCCcccCC
Confidence 5566 6666653
No 101
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=25.47 E-value=18 Score=17.45 Aligned_cols=10 Identities=50% Similarity=1.334 Sum_probs=5.6
Q ss_pred ceee-cCcccc
Q 030772 124 FKCR-CEQTFC 133 (171)
Q Consensus 124 f~Cr-Cg~~FC 133 (171)
|.|. ||..|-
T Consensus 3 ~~C~~C~k~f~ 13 (29)
T 2m0f_A 3 LKCRECGKQFT 13 (29)
T ss_dssp EECTTTSCEES
T ss_pred ccCCCCCCccC
Confidence 5565 665554
No 102
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.42 E-value=35 Score=23.84 Aligned_cols=32 Identities=25% Similarity=0.648 Sum_probs=25.9
Q ss_pred CCCCcccccccccccc---cceee-cCccccCCcCC
Q 030772 107 RPANRCSFCRKRIGLT---GFKCR-CEQTFCSLHRY 138 (171)
Q Consensus 107 ~~~~rC~~C~kkvgl~---gf~Cr-Cg~~FC~~HRy 138 (171)
-..++|..|...+|++ |..|+ |-+--|..-|-
T Consensus 23 ~~~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv 58 (76)
T 2csz_A 23 YSDRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRI 58 (76)
T ss_dssp CCCCBCSSSCCBCSSSCTTTSEETTTTEECCTTSEE
T ss_pred CCccchhhhCccccccccCCCcCcccChhhcccccc
Confidence 3468999999999996 68998 98877776653
No 103
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=25.39 E-value=17 Score=25.59 Aligned_cols=42 Identities=21% Similarity=0.388 Sum_probs=25.8
Q ss_pred CCCCcccccccccccc-----cceee-cCccccCCcCC---CCCCCCCccc
Q 030772 107 RPANRCSFCRKRIGLT-----GFKCR-CEQTFCSLHRY---SDKHNCVFDY 148 (171)
Q Consensus 107 ~~~~rC~~C~kkvgl~-----gf~Cr-Cg~~FC~~HRy---~e~H~C~fDy 148 (171)
..+..|..|++.|=-+ ||+|+ |+.+.=..+.. .=-..|..+|
T Consensus 33 ~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~k~~~v~~~C~~~~ 83 (84)
T 2row_A 33 HFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMDKKEEIIAPCKVYY 83 (84)
T ss_dssp SSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHHHTCTTCCCCSTTT
T ss_pred CCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhCCccccccccCcCC
Confidence 3568899999877532 89999 76654333333 2334555444
No 104
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=25.23 E-value=26 Score=23.68 Aligned_cols=11 Identities=18% Similarity=0.440 Sum_probs=8.1
Q ss_pred CCccccccccc
Q 030772 109 ANRCSFCRKRI 119 (171)
Q Consensus 109 ~~rC~~C~kkv 119 (171)
+-.|..|+|..
T Consensus 34 ~~~C~~C~k~F 44 (96)
T 2ctd_A 34 SVSCPTCQAVG 44 (96)
T ss_dssp CEECTTTCSCE
T ss_pred CcCCCCCCCCc
Confidence 56788888766
No 105
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.14 E-value=60 Score=20.92 Aligned_cols=26 Identities=19% Similarity=0.475 Sum_probs=18.6
Q ss_pred CCcccccccccccc---cceeecCccccC
Q 030772 109 ANRCSFCRKRIGLT---GFKCRCEQTFCS 134 (171)
Q Consensus 109 ~~rC~~C~kkvgl~---gf~CrCg~~FC~ 134 (171)
...|..|...+... ...-.||++||.
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~CgH~fC~ 43 (88)
T 2ct2_A 15 VLECPICMESFTEEQLRPKLLHCGHTICR 43 (88)
T ss_dssp CCBCTTTCCBCCTTSSCEEECSSSCEEEH
T ss_pred CCCCccCCccccccCCCeEECCCCChhhH
Confidence 46799998776542 344479999986
No 106
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=25.12 E-value=27 Score=18.24 Aligned_cols=9 Identities=44% Similarity=1.601 Sum_probs=3.9
Q ss_pred ceee-cCccc
Q 030772 124 FKCR-CEQTF 132 (171)
Q Consensus 124 f~Cr-Cg~~F 132 (171)
|.|. ||..|
T Consensus 12 ~~C~~C~k~f 21 (37)
T 1p7a_A 12 FQCPDCDRSF 21 (37)
T ss_dssp BCCTTTCCCB
T ss_pred ccCCCCCccc
Confidence 4444 44444
No 107
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=25.10 E-value=18 Score=17.79 Aligned_cols=10 Identities=20% Similarity=0.836 Sum_probs=5.8
Q ss_pred ceee-cCcccc
Q 030772 124 FKCR-CEQTFC 133 (171)
Q Consensus 124 f~Cr-Cg~~FC 133 (171)
|.|. ||..|-
T Consensus 4 ~~C~~C~k~f~ 14 (27)
T 2kvg_A 4 YRCPLCRAGCP 14 (27)
T ss_dssp EEETTTTEEES
T ss_pred cCCCCCCcccC
Confidence 5565 666553
No 108
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=24.77 E-value=60 Score=20.02 Aligned_cols=13 Identities=23% Similarity=0.585 Sum_probs=9.5
Q ss_pred CCCcccccccccc
Q 030772 108 PANRCSFCRKRIG 120 (171)
Q Consensus 108 ~~~rC~~C~kkvg 120 (171)
.+-.|..|++...
T Consensus 17 ~~~~C~~C~~~f~ 29 (77)
T 2cot_A 17 RRYKCDECGKSFS 29 (77)
T ss_dssp CSSBCSSSCCBCS
T ss_pred CCEECCCCCcccC
Confidence 4678888887654
No 109
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=24.75 E-value=32 Score=20.93 Aligned_cols=12 Identities=25% Similarity=0.570 Sum_probs=8.2
Q ss_pred CCCccccccccc
Q 030772 108 PANRCSFCRKRI 119 (171)
Q Consensus 108 ~~~rC~~C~kkv 119 (171)
.+-.|..|.+..
T Consensus 8 ~~~~C~~C~k~f 19 (70)
T 1x5w_A 8 HPEKCSECSYSC 19 (70)
T ss_dssp CSEECSSSSCEE
T ss_pred CCeECCCCCccc
Confidence 457788887754
No 110
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=24.47 E-value=53 Score=21.02 Aligned_cols=27 Identities=15% Similarity=0.523 Sum_probs=19.0
Q ss_pred CCCcccccccccccccceee-cCccccCC
Q 030772 108 PANRCSFCRKRIGLTGFKCR-CEQTFCSL 135 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~gf~Cr-Cg~~FC~~ 135 (171)
....|..|...+. ....-. ||++||..
T Consensus 14 ~~~~C~IC~~~~~-~p~~~~~CgH~fC~~ 41 (74)
T 2yur_A 14 DELLCLICKDIMT-DAVVIPCCGNSYCDE 41 (74)
T ss_dssp GGGSCSSSCCCCT-TCEECSSSCCEECTT
T ss_pred CCCCCcCCChHHh-CCeEcCCCCCHHHHH
Confidence 3578999976443 245567 99999974
No 111
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.42 E-value=18 Score=22.87 Aligned_cols=27 Identities=22% Similarity=0.408 Sum_probs=16.4
Q ss_pred CcccccccccccccceeecCccccCCc
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSLH 136 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 136 (171)
-+|..|++.|....|.=+=|..||..|
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~c 60 (72)
T 1wyh_A 34 FLCSGCEQPLGSRSFVPDKGAHYCVPC 60 (72)
T ss_dssp CBCTTTCCBTTTSCEEEETTEEEEHHH
T ss_pred CeECCCCCcCCCCccCCcCCeEECHHH
Confidence 456677777665556555556666543
No 112
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=24.33 E-value=33 Score=24.05 Aligned_cols=36 Identities=28% Similarity=0.486 Sum_probs=21.6
Q ss_pred CCccccccccccccccee-ecCccccCCc--CCCCCCCCCc
Q 030772 109 ANRCSFCRKRIGLTGFKC-RCEQTFCSLH--RYSDKHNCVF 146 (171)
Q Consensus 109 ~~rC~~C~kkvgl~gf~C-rCg~~FC~~H--Ry~e~H~C~f 146 (171)
...|..|..-+.- ...- .||++||..- ++-. ..|+.
T Consensus 22 ~~~C~IC~~~~~~-pv~~~~CgH~fC~~Ci~~~~~-~~CP~ 60 (117)
T 1jm7_B 22 LLRCSRCTNILRE-PVCLGGCEHIFCSNCVSDCIG-TGCPV 60 (117)
T ss_dssp TTSCSSSCSCCSS-CBCCCSSSCCBCTTTGGGGTT-TBCSS
T ss_pred CCCCCCCChHhhC-ccEeCCCCCHHHHHHHHHHhc-CCCcC
Confidence 4678888764432 3444 7999998642 3322 45654
No 113
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=24.29 E-value=24 Score=18.08 Aligned_cols=10 Identities=40% Similarity=1.271 Sum_probs=5.1
Q ss_pred cceee-cCccc
Q 030772 123 GFKCR-CEQTF 132 (171)
Q Consensus 123 gf~Cr-Cg~~F 132 (171)
.|.|. ||..|
T Consensus 7 ~~~C~~C~k~f 17 (35)
T 2elx_A 7 GYVCALCLKKF 17 (35)
T ss_dssp SEECSSSCCEE
T ss_pred CeECCCCcchh
Confidence 35555 55544
No 114
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.96 E-value=21 Score=23.98 Aligned_cols=11 Identities=27% Similarity=0.782 Sum_probs=6.7
Q ss_pred CCccccccccc
Q 030772 109 ANRCSFCRKRI 119 (171)
Q Consensus 109 ~~rC~~C~kkv 119 (171)
..+|..|++.|
T Consensus 25 ~~~C~~C~~~I 35 (90)
T 2dar_A 25 TPMCAHCNQVI 35 (90)
T ss_dssp CCBBSSSCCBC
T ss_pred CCCCccCCCEe
Confidence 45666666655
No 115
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=23.87 E-value=23 Score=24.09 Aligned_cols=23 Identities=22% Similarity=0.788 Sum_probs=18.0
Q ss_pred CCCcccccccccccc---cceee-cCc
Q 030772 108 PANRCSFCRKRIGLT---GFKCR-CEQ 130 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~---gf~Cr-Cg~ 130 (171)
-...|..|+..+.+. ...|+ ||+
T Consensus 27 v~Y~C~~CG~~~e~~~~d~irCp~CG~ 53 (70)
T 1twf_L 27 LKYICAECSSKLSLSRTDAVRCKDCGH 53 (70)
T ss_dssp CCEECSSSCCEECCCTTSTTCCSSSCC
T ss_pred EEEECCCCCCcceeCCCCCccCCCCCc
Confidence 357899999997774 47888 766
No 116
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=23.85 E-value=49 Score=20.97 Aligned_cols=25 Identities=16% Similarity=0.575 Sum_probs=17.8
Q ss_pred CCcccccccccccccceeecCccccC
Q 030772 109 ANRCSFCRKRIGLTGFKCRCEQTFCS 134 (171)
Q Consensus 109 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 134 (171)
...|..|...+.- .....||++||.
T Consensus 12 ~~~C~IC~~~~~~-p~~l~CgH~fC~ 36 (79)
T 2egp_A 12 EVTCPICLELLTE-PLSLDCGHSLCR 36 (79)
T ss_dssp CCEETTTTEECSS-CCCCSSSCCCCH
T ss_pred CCCCcCCCcccCC-eeECCCCCHHHH
Confidence 4779999775432 344579999995
No 117
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.67 E-value=21 Score=22.57 Aligned_cols=26 Identities=27% Similarity=0.585 Sum_probs=14.2
Q ss_pred CcccccccccccccceeecCccccCC
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSL 135 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~ 135 (171)
-+|..|++.|.-..|.=+=|..||..
T Consensus 32 F~C~~C~~~L~~~~~~~~~~~~yC~~ 57 (70)
T 2d8z_A 32 FVCTACRKQLSGQRFTARDDFAYCLN 57 (70)
T ss_dssp SBCSSSCCBCTTSCCEESSSSEECHH
T ss_pred CccCCCCCcCCcCceEeeCCeEECHH
Confidence 45666777665444544444555543
No 118
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=23.53 E-value=20 Score=25.33 Aligned_cols=13 Identities=23% Similarity=0.674 Sum_probs=10.2
Q ss_pred cccceeecCcccc
Q 030772 121 LTGFKCRCEQTFC 133 (171)
Q Consensus 121 l~gf~CrCg~~FC 133 (171)
..-+.||||..|-
T Consensus 28 ~y~y~CrCGd~F~ 40 (83)
T 1wge_A 28 TYFYPCPCGDNFA 40 (83)
T ss_dssp EEEECCSSSSCEE
T ss_pred EEEEeCCCCCEEE
Confidence 3568999999883
No 119
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.51 E-value=42 Score=20.57 Aligned_cols=27 Identities=22% Similarity=0.550 Sum_probs=18.1
Q ss_pred CCCccccccccccccc------ceeecCccccC
Q 030772 108 PANRCSFCRKRIGLTG------FKCRCEQTFCS 134 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~g------f~CrCg~~FC~ 134 (171)
....|..|...+.... ..-.||++||.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~ 46 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCS 46 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEH
T ss_pred CCCCCcccCccccccccccCCeEeCCCCChhcH
Confidence 3577999987654321 44569999984
No 120
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.45 E-value=22 Score=23.69 Aligned_cols=25 Identities=24% Similarity=0.753 Sum_probs=19.1
Q ss_pred CCCcccccccccc-c--ccceee-cCccc
Q 030772 108 PANRCSFCRKRIG-L--TGFKCR-CEQTF 132 (171)
Q Consensus 108 ~~~rC~~C~kkvg-l--~gf~Cr-Cg~~F 132 (171)
.+..|..|++.|- | -|++|+ |+...
T Consensus 27 ~pt~C~~C~~~lwGl~kqG~~C~~C~~~~ 55 (74)
T 2db6_A 27 KPKFCDVCARMIVLNNKFGLRCKNCKTNI 55 (74)
T ss_dssp SCEECSSSCCEECHHHHEEEEESSSCCEE
T ss_pred CCcCchhcChhhccccCCccccCCCCCcc
Confidence 4789999999773 3 389999 76653
No 121
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.45 E-value=20 Score=24.14 Aligned_cols=27 Identities=26% Similarity=0.771 Sum_probs=14.4
Q ss_pred CcccccccccccccceeecCccccCCc
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSLH 136 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 136 (171)
-+|..|++.|....|.=+=|..||..|
T Consensus 43 F~C~~C~~~L~~~~~~~~~g~~yC~~~ 69 (91)
T 2d8y_A 43 FRCSYCNNKLSLGTYASLHGRIYCKPH 69 (91)
T ss_dssp CBCTTTCCBCCTTTCCCSSSCCCCHHH
T ss_pred CeeCCCCCCCCCCCcEeECCEEECHHH
Confidence 455566666555445444455555443
No 122
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=23.01 E-value=26 Score=18.06 Aligned_cols=11 Identities=45% Similarity=1.087 Sum_probs=5.6
Q ss_pred cceee-cCcccc
Q 030772 123 GFKCR-CEQTFC 133 (171)
Q Consensus 123 gf~Cr-Cg~~FC 133 (171)
.|.|. ||..|-
T Consensus 7 ~~~C~~C~k~f~ 18 (35)
T 1srk_A 7 PFVCRICLSAFT 18 (35)
T ss_dssp CEECSSSCCEES
T ss_pred CeeCCCCCcccC
Confidence 35555 555553
No 123
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.82 E-value=21 Score=23.29 Aligned_cols=27 Identities=30% Similarity=0.571 Sum_probs=18.3
Q ss_pred CcccccccccccccceeecCccccCCc
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSLH 136 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 136 (171)
-+|..|++.|....|.=+=|..||..|
T Consensus 44 F~C~~C~~~L~~~~~~~~~~~~yC~~c 70 (82)
T 1x63_A 44 FTCSNCKQVIGTGSFFPKGEDFYCVTC 70 (82)
T ss_dssp CCCSSSCCCCTTSCEEEETTEEEEHHH
T ss_pred CchhhCCCccCCCccEeeCCEEECHHH
Confidence 567788887776666666666777544
No 124
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=22.80 E-value=55 Score=23.57 Aligned_cols=25 Identities=28% Similarity=0.739 Sum_probs=17.5
Q ss_pred CCCcccccccccccccceee-cCccc
Q 030772 108 PANRCSFCRKRIGLTGFKCR-CEQTF 132 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~gf~Cr-Cg~~F 132 (171)
....|..|.---.-.=|.|| |+.+|
T Consensus 14 ~D~~C~VC~~~t~~~l~pCRvC~Rvf 39 (89)
T 1wil_A 14 NDEMCDVCEVWTAESLFPCRVCTRVF 39 (89)
T ss_dssp CSCCCTTTCCCCSSCCSSCSSSSSCC
T ss_pred CCcccCccccccccceeccccccccc
Confidence 45678888754333458899 88887
No 125
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=28.30 E-value=18 Score=17.76 Aligned_cols=11 Identities=27% Similarity=0.899 Sum_probs=7.0
Q ss_pred ceee-cCccccC
Q 030772 124 FKCR-CEQTFCS 134 (171)
Q Consensus 124 f~Cr-Cg~~FC~ 134 (171)
|.|. ||..|-.
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 2lvt_A 3 CQCVMCGKAFTQ 14 (29)
Confidence 5666 7766754
No 126
>1e0f_I Haemadin, factor IIA; coagulation//heparin-B, coagulation/crystal structure/heparin-binding site/ hirudin/thrombin inhibitor; 3.1A {Haemadipsa sylvestris} SCOP: g.3.15.2
Probab=22.42 E-value=52 Score=21.35 Aligned_cols=30 Identities=27% Similarity=0.668 Sum_probs=21.6
Q ss_pred ccccceeecCccccCCcCCCCCCCCCccch
Q 030772 120 GLTGFKCRCEQTFCSLHRYSDKHNCVFDYK 149 (171)
Q Consensus 120 gl~gf~CrCg~~FC~~HRy~e~H~C~fDyk 149 (171)
|-.||.|.||...|-.-.--....|+-|-|
T Consensus 13 gevgytcdcgekiclygqscndgqcsgdpk 42 (57)
T 1e0f_I 13 GEVGYTCDCGEKICLYGQSCNDGQCSGDPK 42 (57)
T ss_dssp SSCSSCEECSSSEECTTCCBSSSCBCSCCC
T ss_pred CceeeeccCCceeeEecccccCCcccCCCC
Confidence 445888999988887666666677776654
No 127
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.02 E-value=58 Score=20.58 Aligned_cols=25 Identities=28% Similarity=0.558 Sum_probs=17.5
Q ss_pred CCccccccccccccccee-ecCccccC
Q 030772 109 ANRCSFCRKRIGLTGFKC-RCEQTFCS 134 (171)
Q Consensus 109 ~~rC~~C~kkvgl~gf~C-rCg~~FC~ 134 (171)
...|..|...+.- ...- .||++||.
T Consensus 15 ~~~C~IC~~~~~~-p~~~~~CgH~fC~ 40 (72)
T 2djb_A 15 YILCSICKGYLID-ATTITECLHTFCK 40 (72)
T ss_dssp GGSCTTTSSCCSS-CEECSSSCCEECH
T ss_pred CCCCCCCChHHHC-cCEECCCCCHHHH
Confidence 5789999765433 3444 79999986
No 128
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=22.00 E-value=25 Score=26.47 Aligned_cols=30 Identities=23% Similarity=0.605 Sum_probs=21.9
Q ss_pred CCCCccccccc----ccccccceee-cCccccCCc
Q 030772 107 RPANRCSFCRK----RIGLTGFKCR-CEQTFCSLH 136 (171)
Q Consensus 107 ~~~~rC~~C~k----kvgl~gf~Cr-Cg~~FC~~H 136 (171)
..+..|..|++ +++.--.+|+ ||++|-+-=
T Consensus 58 ~akytCPfCGk~~vKR~avGIW~C~~Cgk~fAGGA 92 (116)
T 3cc2_Z 58 NEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGS 92 (116)
T ss_dssp HSCEECSSSCCEEEEEEETTEEEETTTCCEEECCS
T ss_pred ccCCcCCCCCCceeEecCceeEECCCCCCEEECCC
Confidence 45789999998 2222238999 999998763
No 129
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=21.87 E-value=24 Score=17.12 Aligned_cols=11 Identities=36% Similarity=1.071 Sum_probs=6.2
Q ss_pred ceee-cCccccC
Q 030772 124 FKCR-CEQTFCS 134 (171)
Q Consensus 124 f~Cr-Cg~~FC~ 134 (171)
|.|. ||..|-.
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 1rik_A 3 FACPECPKRFMR 14 (29)
T ss_dssp EECSSSSCEESC
T ss_pred ccCCCCCchhCC
Confidence 5555 6666643
No 130
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=21.69 E-value=29 Score=23.50 Aligned_cols=27 Identities=30% Similarity=0.757 Sum_probs=18.4
Q ss_pred CCCcccccccccccc--------------cceee-cCccccC
Q 030772 108 PANRCSFCRKRIGLT--------------GFKCR-CEQTFCS 134 (171)
Q Consensus 108 ~~~rC~~C~kkvgl~--------------gf~Cr-Cg~~FC~ 134 (171)
..-.|..|+|...-. .|.|. ||..|-.
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~ 68 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYS 68 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESS
T ss_pred CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCC
Confidence 356799998864431 48887 8777753
No 131
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=21.50 E-value=78 Score=20.50 Aligned_cols=27 Identities=22% Similarity=0.707 Sum_probs=18.6
Q ss_pred CCCccccccccccc--------------ccceee-cCccccC
Q 030772 108 PANRCSFCRKRIGL--------------TGFKCR-CEQTFCS 134 (171)
Q Consensus 108 ~~~rC~~C~kkvgl--------------~gf~Cr-Cg~~FC~ 134 (171)
.+-.|..|++.... ..|.|. |+..|-.
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~ 57 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRR 57 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCC
Confidence 45788888876542 148887 8888854
No 132
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=21.41 E-value=30 Score=23.88 Aligned_cols=30 Identities=13% Similarity=0.501 Sum_probs=21.6
Q ss_pred CCCCCccccccc-ccccc--c-ceee-cCccccCC
Q 030772 106 KRPANRCSFCRK-RIGLT--G-FKCR-CEQTFCSL 135 (171)
Q Consensus 106 ~~~~~rC~~C~k-kvgl~--g-f~Cr-Cg~~FC~~ 135 (171)
+..+..|..|+| +|.-. | -.|+ |+.+|=+-
T Consensus 24 q~~ky~C~fCgk~~vkR~a~GIW~C~~C~~~~AGG 58 (73)
T 1ffk_W 24 HKKKYKCPVCGFPKLKRASTSIWVCGHCGYKIAGG 58 (73)
T ss_pred cccCccCCCCCCceeEEEEeEEEECCCCCcEEECC
Confidence 456789999998 33322 3 8899 99998764
No 133
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.05 E-value=34 Score=17.59 Aligned_cols=10 Identities=30% Similarity=0.836 Sum_probs=4.5
Q ss_pred cceee-cCccc
Q 030772 123 GFKCR-CEQTF 132 (171)
Q Consensus 123 gf~Cr-Cg~~F 132 (171)
.|.|. ||..|
T Consensus 9 ~~~C~~C~k~f 19 (36)
T 2elt_A 9 PYKCPQCSYAS 19 (36)
T ss_dssp SEECSSSSCEE
T ss_pred CCCCCCCCccc
Confidence 34444 44444
No 134
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=20.83 E-value=26 Score=22.54 Aligned_cols=27 Identities=22% Similarity=0.443 Sum_probs=17.1
Q ss_pred CcccccccccccccceeecCccccCCc
Q 030772 110 NRCSFCRKRIGLTGFKCRCEQTFCSLH 136 (171)
Q Consensus 110 ~rC~~C~kkvgl~gf~CrCg~~FC~~H 136 (171)
-+|..|++.|.-..|.=+=|..||..|
T Consensus 47 F~C~~C~~~L~~~~f~~~~~~~yC~~c 73 (77)
T 2egq_A 47 FHCKKCSVNLANKRFVFHQEQVYCPDC 73 (77)
T ss_dssp CBCSSSCCBCTTSCCCEETTEECCHHH
T ss_pred CEehhcCCCCCCCccEeECCEEEChHH
Confidence 567777777665556556666666543
No 135
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.49 E-value=33 Score=17.68 Aligned_cols=8 Identities=38% Similarity=1.095 Sum_probs=3.5
Q ss_pred Cccccccc
Q 030772 110 NRCSFCRK 117 (171)
Q Consensus 110 ~rC~~C~k 117 (171)
-.|..|.|
T Consensus 10 ~~C~~C~k 17 (36)
T 2elr_A 10 HLCDMCGK 17 (36)
T ss_dssp CBCTTTCC
T ss_pred eecCcCCC
Confidence 34444444
No 136
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.37 E-value=36 Score=17.77 Aligned_cols=11 Identities=36% Similarity=0.960 Sum_probs=6.1
Q ss_pred cceee-cCcccc
Q 030772 123 GFKCR-CEQTFC 133 (171)
Q Consensus 123 gf~Cr-Cg~~FC 133 (171)
.|.|. ||..|-
T Consensus 9 ~~~C~~C~k~f~ 20 (37)
T 2elp_A 9 AMKCPYCDFYFM 20 (37)
T ss_dssp CEECSSSSCEEC
T ss_pred CeECCCCChhhc
Confidence 45565 555554
No 137
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=20.24 E-value=34 Score=23.77 Aligned_cols=25 Identities=20% Similarity=0.585 Sum_probs=17.4
Q ss_pred CCcccccccccccccceeecCccccC
Q 030772 109 ANRCSFCRKRIGLTGFKCRCEQTFCS 134 (171)
Q Consensus 109 ~~rC~~C~kkvgl~gf~CrCg~~FC~ 134 (171)
...|..|...+.- ...-.||++||.
T Consensus 15 ~~~C~iC~~~~~~-p~~~~CgH~fC~ 39 (115)
T 3l11_A 15 ECQCGICMEILVE-PVTLPCNHTLCK 39 (115)
T ss_dssp HHBCTTTCSBCSS-CEECTTSCEECH
T ss_pred CCCCccCCcccCc-eeEcCCCCHHhH
Confidence 4679999865432 333379999995
Done!