Your job contains 1 sequence.
>030778
MEISSKNNEIVDVSYVDDECSEQSWMLRSLSESTVACITGDYAMQNVILQMGLRLLAPGG
MQIRQLHRWILKCHACYTITAEIGRIFCPKCGNGGTLRKVAVTVGENGIVLASRRPRITL
RGTKFSLPMPQGGRDAITKNLILREDQLPQKYLYPRNKKKVNKEVSGFSLF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030778
(171 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2163071 - symbol:NOB1 species:3702 "Arabidopsi... 679 8.2e-67 1
UNIPROTKB|Q9ULX3 - symbol:NOB1 "RNA-binding protein NOB1"... 296 3.2e-26 1
RGD|735222 - symbol:Nob1 "NIN1/RPN12 binding protein 1 ho... 292 8.4e-26 1
UNIPROTKB|Q3T042 - symbol:NOB1 "RNA-binding protein NOB1"... 291 1.1e-25 1
MGI|MGI:1914869 - symbol:Nob1 "NIN1/RPN12 binding protein... 289 1.8e-25 1
FB|FBgn0030177 - symbol:CG2972 species:7227 "Drosophila m... 255 2.7e-21 1
POMBASE|SPAC1486.09 - symbol:SPAC1486.09 "ribosome biogen... 243 2.3e-20 1
WB|WBGene00021843 - symbol:Y54E10BR.4 species:6239 "Caeno... 202 7.8e-16 1
UNIPROTKB|G4MQ79 - symbol:MGG_09254 "20S-pre-rRNA D-site ... 192 2.1e-14 1
ASPGD|ASPL0000014547 - symbol:AN8253 species:162425 "Emer... 184 1.3e-13 1
CGD|CAL0000302 - symbol:HBR3 species:5476 "Candida albica... 181 3.2e-13 1
SGD|S000005582 - symbol:NOB1 "Protein involved in proteas... 164 2.2e-11 1
>TAIR|locus:2163071 [details] [associations]
symbol:NOB1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006606 "protein import
into nucleus" evidence=RCA] [GO:0000469 "cleavage involved in rRNA
processing" evidence=IDA] [GO:0004521 "endoribonuclease activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009555 "pollen development"
evidence=IMP] EMBL:CP002688 EMBL:AB010072 KO:K11883
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY IPI:IPI00524371 RefSeq:NP_198935.1
UniGene:At.51074 ProteinModelPortal:Q9FLL1 SMR:Q9FLL1 STRING:Q9FLL1
PRIDE:Q9FLL1 EnsemblPlants:AT5G41190.1 GeneID:834121
KEGG:ath:AT5G41190 TAIR:At5g41190 InParanoid:Q9FLL1
PhylomeDB:Q9FLL1 ProtClustDB:CLSN2686224 Genevestigator:Q9FLL1
Uniprot:Q9FLL1
Length = 602
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 126/164 (76%), Positives = 147/164 (89%)
Query: 1 MEISSKNNEIVDVSYV-DDECSEQSWMLRSLSESTVACITGDYAMQNVILQMGLRLLAPG 59
+EI+S+ + + S + DD SEQSW LR+LSES+VACITGDYAMQNVILQMGLRLLAPG
Sbjct: 389 LEIASEAEDTFEASSIGDDGSSEQSWSLRALSESSVACITGDYAMQNVILQMGLRLLAPG 448
Query: 60 GMQIRQLHRWILKCHACYTITAEIGRIFCPKCGNGGTLRKVAVTVGENGIVLASRRPRIT 119
GMQIRQLHRWILKCHACYT+T EIGRIFCPKCGNGGTLRKVAVT+G NG ++A+ +PRIT
Sbjct: 449 GMQIRQLHRWILKCHACYTVTPEIGRIFCPKCGNGGTLRKVAVTIGANGAIIAACKPRIT 508
Query: 120 LRGTKFSLPMPQGGRDAITKNLILREDQLPQKYLYPRNKKKVNK 163
LRGT++S+PMP+GGR+AITKNLILREDQLPQK L+PR KKK +K
Sbjct: 509 LRGTQYSIPMPKGGREAITKNLILREDQLPQKLLHPRTKKKASK 552
>UNIPROTKB|Q9ULX3 [details] [associations]
symbol:NOB1 "RNA-binding protein NOB1" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006596 GO:GO:0005634
GO:GO:0046872 SMART:SM00670 CleanEx:HS_ART4 CTD:28987
eggNOG:COG1439 HOGENOM:HOG000159692 HOVERGEN:HBG057385 KO:K11883
OrthoDB:EOG4S4PGJ InterPro:IPR017117 InterPro:IPR014881
Pfam:PF08772 PIRSF:PIRSF037125 EMBL:AB026125 EMBL:AY487344
EMBL:AK001028 EMBL:BC000050 EMBL:BC064630 EMBL:AF190161
IPI:IPI00022373 PIR:A61382 RefSeq:NP_054781.1 UniGene:Hs.271695
ProteinModelPortal:Q9ULX3 SMR:Q9ULX3 IntAct:Q9ULX3 STRING:Q9ULX3
DMDM:74753398 PaxDb:Q9ULX3 PRIDE:Q9ULX3 DNASU:28987
Ensembl:ENST00000268802 GeneID:28987 KEGG:hsa:28987 UCSC:uc002exs.3
GeneCards:GC16M069775 HGNC:HGNC:29540 HPA:HPA049430 MIM:613586
neXtProt:NX_Q9ULX3 PharmGKB:PA143485585 InParanoid:Q9ULX3
OMA:KEPLPEY GenomeRNAi:28987 NextBio:51895 Bgee:Q9ULX3
CleanEx:HS_NOB1 Genevestigator:Q9ULX3 GermOnline:ENSG00000141101
Uniprot:Q9ULX3
Length = 412
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 62/132 (46%), Positives = 89/132 (67%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRWILKCHACYTITAEIGRIFCPKCGNG 94
V C+T D+AMQNV+LQMGL +LA GM IR+ +IL+CH C+ T+++ R+FC CGN
Sbjct: 232 VGCLTTDFAMQNVLLQMGLHVLAVNGMLIREARSYILRCHGCFKTTSDMSRVFCSHCGNK 291
Query: 95 GTLRKVAVTVGENGIVLA--SRRPRI-TLRGTKFSLPMPQGGRDAITKNLILREDQ-LPQ 150
TL+KV+VTV ++G + SR P++ RG ++SLP P+GG+ AI +L EDQ PQ
Sbjct: 292 -TLKKVSVTVSDDGTLHMHFSRNPKVLNPRGLRYSLPTPKGGKYAINPHLT--EDQRFPQ 348
Query: 151 KYLYPRNKKKVN 162
L + ++K N
Sbjct: 349 LRLSQKARQKTN 360
>RGD|735222 [details] [associations]
symbol:Nob1 "NIN1/RPN12 binding protein 1 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR006596 RGD:735222 GO:GO:0005634
GO:GO:0046872 SMART:SM00670 CTD:28987 eggNOG:COG1439
HOGENOM:HOG000159692 HOVERGEN:HBG057385 KO:K11883 OrthoDB:EOG4S4PGJ
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY GeneTree:ENSGT00390000015857
EMBL:AY341886 EMBL:BC126076 IPI:IPI00396864 RefSeq:NP_954517.1
UniGene:Rn.102586 ProteinModelPortal:Q6VEU1 SMR:Q6VEU1
STRING:Q6VEU1 Ensembl:ENSRNOT00000034386 GeneID:291996
KEGG:rno:291996 UCSC:RGD:735222 InParanoid:Q6VEU1 NextBio:633580
ArrayExpress:Q6VEU1 Genevestigator:Q6VEU1
GermOnline:ENSRNOG00000021890 Uniprot:Q6VEU1
Length = 410
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 59/132 (44%), Positives = 89/132 (67%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRWILKCHACYTITAEIGRIFCPKCGNG 94
V C+T D+AMQNV+LQMGL +LA GM +R+ +IL+CH C+ T+++ R+FC CGN
Sbjct: 230 VGCVTTDFAMQNVLLQMGLHVLAVNGMLVREARSYILRCHGCFKTTSDMNRVFCGHCGNK 289
Query: 95 GTLRKVAVTVGENGIVLA--SRRPRI-TLRGTKFSLPMPQGGRDAITKNLILREDQ-LPQ 150
TL+KV+VT+ ++G + SR P++ RG ++SLP P+GG+ A+ +L EDQ PQ
Sbjct: 290 -TLKKVSVTINDDGTLHMHFSRNPKVLNPRGLRYSLPTPKGGKYAVNPHLT--EDQRFPQ 346
Query: 151 KYLYPRNKKKVN 162
L + ++K N
Sbjct: 347 LRLSHKARQKTN 358
>UNIPROTKB|Q3T042 [details] [associations]
symbol:NOB1 "RNA-binding protein NOB1" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR006596 GO:GO:0005634
GO:GO:0046872 SMART:SM00670 EMBL:AY336977 EMBL:BC102577
IPI:IPI00690132 RefSeq:NP_898906.1 UniGene:Bt.49199
ProteinModelPortal:Q3T042 SMR:Q3T042 STRING:Q3T042 PRIDE:Q3T042
GeneID:360191 KEGG:bta:360191 CTD:28987 eggNOG:COG1439
HOGENOM:HOG000159692 HOVERGEN:HBG057385 InParanoid:Q3T042 KO:K11883
OrthoDB:EOG4S4PGJ NextBio:20812791 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 Uniprot:Q3T042
Length = 413
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 61/132 (46%), Positives = 89/132 (67%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRWILKCHACYTITAEIGRIFCPKCGNG 94
V C+T D+AMQNV+LQMGL +LA GM IR+ +IL+CH C+ T+++ R+FC CGN
Sbjct: 233 VGCVTTDFAMQNVLLQMGLHVLAVNGMLIREARSYILRCHGCFKTTSDMSRVFCAHCGNK 292
Query: 95 GTLRKVAVTVGENGIVLA--SRRPRI-TLRGTKFSLPMPQGGRDAITKNLILREDQ-LPQ 150
TL+KV+VTV ++G + SR P++ RG ++SLP P+GG+ AI +L EDQ PQ
Sbjct: 293 -TLKKVSVTVSDDGTLHMHFSRNPKVLNPRGLRYSLPTPKGGKYAINPHLT--EDQRFPQ 349
Query: 151 KYLYPRNKKKVN 162
L + ++K +
Sbjct: 350 LRLSRKARQKTD 361
>MGI|MGI:1914869 [details] [associations]
symbol:Nob1 "NIN1/RPN12 binding protein 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISA] [GO:0005730 "nucleolus" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISA] [GO:0030490 "maturation of SSU-rRNA"
evidence=ISA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
MGI:MGI:1914869 InterPro:IPR006596 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0030490 SMART:SM00670 CTD:28987 eggNOG:COG1439
HOGENOM:HOG000159692 HOVERGEN:HBG057385 KO:K11883 OrthoDB:EOG4S4PGJ
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY EMBL:AK075755 EMBL:AK021194
EMBL:BC054835 EMBL:BC103793 IPI:IPI00225974 RefSeq:NP_080553.1
UniGene:Mm.334793 PDB:2CON PDBsum:2CON ProteinModelPortal:Q8BW10
SMR:Q8BW10 IntAct:Q8BW10 STRING:Q8BW10 PhosphoSite:Q8BW10
PaxDb:Q8BW10 PRIDE:Q8BW10 Ensembl:ENSMUST00000003946 GeneID:67619
KEGG:mmu:67619 GeneTree:ENSGT00390000015857 InParanoid:Q8BW10
ChiTaRS:NOB1 EvolutionaryTrace:Q8BW10 NextBio:325057 Bgee:Q8BW10
Genevestigator:Q8BW10 GermOnline:ENSMUSG00000003848 Uniprot:Q8BW10
Length = 403
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 59/132 (44%), Positives = 89/132 (67%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRWILKCHACYTITAEIGRIFCPKCGNG 94
V C+T D+AMQNV+LQMGL +LA GM +R+ +IL+CH C+ T+++ R+FC CGN
Sbjct: 223 VGCVTTDFAMQNVLLQMGLHVLAVNGMLVREARSYILRCHGCFKTTSDMNRVFCGHCGNK 282
Query: 95 GTLRKVAVTVGENGIVLA--SRRPRI-TLRGTKFSLPMPQGGRDAITKNLILREDQ-LPQ 150
TL+KV+VT+ ++G + SR P++ RG ++SLP P+GG+ AI +L EDQ PQ
Sbjct: 283 -TLKKVSVTINDDGTLHMHFSRNPKVLNPRGLRYSLPTPKGGKYAINPHLT--EDQRFPQ 339
Query: 151 KYLYPRNKKKVN 162
L + ++K +
Sbjct: 340 LRLSQKARQKTD 351
>FB|FBgn0030177 [details] [associations]
symbol:CG2972 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] GO:GO:0022008
EMBL:AE014298 eggNOG:COG1439 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 OMA:KEPLPEY
GeneTree:ENSGT00390000015857 EMBL:AY119594 RefSeq:NP_572603.1
UniGene:Dm.11186 SMR:Q9W2Y4 IntAct:Q9W2Y4 MINT:MINT-874469
STRING:Q9W2Y4 EnsemblMetazoa:FBtr0071430 GeneID:31943
KEGG:dme:Dmel_CG2972 UCSC:CG2972-RA FlyBase:FBgn0030177
InParanoid:Q9W2Y4 OrthoDB:EOG42548K GenomeRNAi:31943 NextBio:776063
Uniprot:Q9W2Y4
Length = 472
Score = 255 (94.8 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 64/145 (44%), Positives = 91/145 (62%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRWILKCHACYTITAEIGRIFCPKCGNG 94
VAC+T DYA+QNV+ Q+ L L A G I+QL +IL+C+ACY T+ + ++FCP CGN
Sbjct: 291 VACMTTDYALQNVLKQLNLHLAALNGRIIKQLRTYILRCYACYKTTSIMTKVFCPNCGNK 350
Query: 95 GTLRKVAVTVGENG---IVLASRRPRITLRGTKFSLPMPQGGRDAITKNLILREDQ-LPQ 150
TL++VAV++ ENG I + +RRP +T + SLP QGG+ + +N IL EDQ +P+
Sbjct: 351 -TLKRVAVSLDENGRQVIHINTRRP-LTNKYKNQSLPRFQGGKHS--RNPILFEDQPMPR 406
Query: 151 KYLYPRNKKKVNK----EVSGFSLF 171
+ K K N +GFS F
Sbjct: 407 QMPSRVAKTKTNALDQDYTAGFSPF 431
>POMBASE|SPAC1486.09 [details] [associations]
symbol:SPAC1486.09 "ribosome biogenesis protein Nob1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0004521 "endoribonuclease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030688 "preribosome, small subunit precursor" evidence=ISO]
[GO:0042274 "ribosomal small subunit biogenesis" evidence=ISO]
[GO:0043248 "proteasome assembly" evidence=ISO] [GO:0046872 "metal
ion binding" evidence=IEA] PomBase:SPAC1486.09 InterPro:IPR006596
GO:GO:0005829 GO:GO:0005634 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003723 GO:GO:0043248
GO:GO:0004521 GO:GO:0042274 SMART:SM00670 GO:GO:0030688
eggNOG:COG1439 HOGENOM:HOG000159692 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 PIR:T50078
RefSeq:NP_594097.1 HSSP:Q8BW10 ProteinModelPortal:Q9UTK0
STRING:Q9UTK0 EnsemblFungi:SPAC1486.09.1 GeneID:2541448
KEGG:spo:SPAC1486.09 OMA:TTSVMTK OrthoDB:EOG4CRQ7R NextBio:20802550
Uniprot:Q9UTK0
Length = 388
Score = 243 (90.6 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 53/135 (39%), Positives = 78/135 (57%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRWILKCHACYTITAEIGRIFCPKCGNG 94
VAC T D++MQNV+LQ+GL L++ G +I+ + R++L+CH CYT+ ++ + FCP CG G
Sbjct: 218 VACATTDFSMQNVLLQIGLNLVSSDGFKIQNVKRFVLRCHGCYTVVKDMEKKFCPSCG-G 276
Query: 95 GTLRKVAVTVGENGIVLASRRPRIT--LRGTKFSLPMPQGGRD--AITKNLILREDQLPQ 150
TL K ++ G + RGTK+SLP P G KN +LREDQ
Sbjct: 277 NTLIKTTCSINSKGEFQVHLKKNFEWKTRGTKYSLPKPVHGTSNGKGKKNPVLREDQPEY 336
Query: 151 KYLYPRNKKKVNKEV 165
+ R ++K KE+
Sbjct: 337 QRAVRRMQRK--KEI 349
>WB|WBGene00021843 [details] [associations]
symbol:Y54E10BR.4 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
GO:GO:0008340 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0071688 GO:GO:0040035 eggNOG:COG1439
HOGENOM:HOG000159692 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125
GeneTree:ENSGT00390000015857 OMA:TTSVMTK EMBL:FO081636
RefSeq:NP_491090.1 ProteinModelPortal:Q9N3D3 SMR:Q9N3D3
STRING:Q9N3D3 PaxDb:Q9N3D3 EnsemblMetazoa:Y54E10BR.4 GeneID:171874
KEGG:cel:CELE_Y54E10BR.4 UCSC:Y54E10BR.4 CTD:171874
WormBase:Y54E10BR.4 InParanoid:Q9N3D3 NextBio:873055 Uniprot:Q9N3D3
Length = 364
Score = 202 (76.2 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 47/121 (38%), Positives = 74/121 (61%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRWILKCHACYTITAEIGRIFCPKCGNG 94
V C+T D+A+QNV+L M L L++ G +IR+L ++L+C C++ T+ + + FCP CG+
Sbjct: 196 VGCLTTDFALQNVLLAMNLSLVSLSGYRIRKLKSFVLRCRTCFSTTSVMTKEFCPACGHK 255
Query: 95 GTLRKVAVTVGENGIV-LASRRPRIT-LRGTKFSLPMPQGGRDAITKNLILREDQLPQKY 152
TL K AV+V E+G L R+ RG ++L P+GG+ A + L EDQ P +
Sbjct: 256 -TLHKCAVSVDEDGNQQLHINWNRMANRRGLVYTLANPKGGKHATNERLF--EDQ-PMPH 311
Query: 153 L 153
+
Sbjct: 312 M 312
>UNIPROTKB|G4MQ79 [details] [associations]
symbol:MGG_09254 "20S-pre-rRNA D-site endonuclease NOB1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006596 GO:GO:0004519 EMBL:CM001231
SMART:SM00670 KO:K11883 InterPro:IPR017117 InterPro:IPR014881
Pfam:PF08772 PIRSF:PIRSF037125 RefSeq:XP_003709884.1
ProteinModelPortal:G4MQ79 EnsemblFungi:MGG_09254T0 GeneID:2680190
KEGG:mgr:MGG_09254 Uniprot:G4MQ79
Length = 467
Score = 192 (72.6 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 45/126 (35%), Positives = 69/126 (54%)
Query: 36 ACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRWILKCHACYTITAEIGRIFCPKCGNGG 95
A +T D+AMQNV L++ L +++P +I L W+L+CH C+ +T ++ + FCPKCG
Sbjct: 290 ALLTSDFAMQNVSLRINLNVVSPTLARITHLKSWVLRCHGCFAVTRQMEKQFCPKCGQP- 348
Query: 96 TLRKVAVTVGENGI--VLASRRPRITLRGTKFSLPMPQ------------GGRDAITKNL 141
TL + + + NG V R + RG FS+P P GG++ K+L
Sbjct: 349 TLTRTSCSTDTNGNFKVHLKRNFQWNNRGNVFSIPKPVHGTASGKKTVSGGGKNGWGKDL 408
Query: 142 ILREDQ 147
+L EDQ
Sbjct: 409 LLAEDQ 414
>ASPGD|ASPL0000014547 [details] [associations]
symbol:AN8253 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006596 EMBL:BN001302
GO:GO:0000502 EMBL:AACD01000145 SMART:SM00670 eggNOG:COG1439
HOGENOM:HOG000159692 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 OMA:KEPLPEY
OrthoDB:EOG4CRQ7R RefSeq:XP_681522.1 ProteinModelPortal:Q5ATX7
STRING:Q5ATX7 EnsemblFungi:CADANIAT00004311 GeneID:2869144
KEGG:ani:AN8253.2 Uniprot:Q5ATX7
Length = 431
Score = 184 (69.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 41/102 (40%), Positives = 60/102 (58%)
Query: 35 VACITGDYAMQNVILQMGLRLLAPGGMQ-IRQLHRWILKCHACYTITAEIGRIFCPKCGN 93
VA +T D+A QNV+LQM L LL+ +Q I L +I +CHAC++ T ++ + FCP+CG
Sbjct: 252 VATMTTDFACQNVLLQMNLNLLSTATLQRISHLKSFIKRCHACFSTTKDMNKQFCPRCG- 310
Query: 94 GGTLRKVAVTVGENGIVLASRRPRITL--RGTKFSLPMPQGG 133
G TL +V+ T +G + + RG FS+P P G
Sbjct: 311 GDTLTRVSCTTDSSGQFKMHLKKNMQWNNRGNVFSVPKPVHG 352
>CGD|CAL0000302 [details] [associations]
symbol:HBR3 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030688 "preribosome, small subunit precursor" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=IEA] [GO:0070181
"SSU rRNA binding" evidence=IEA] [GO:0043248 "proteasome assembly"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
CGD:CAL0000302 InterPro:IPR006596 EMBL:AACQ01000148
EMBL:AACQ01000147 SMART:SM00670 eggNOG:COG1439 KO:K11883
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 RefSeq:XP_712719.1 RefSeq:XP_712756.1
ProteinModelPortal:Q59SR4 STRING:Q59SR4 GeneID:3645652
GeneID:3645689 KEGG:cal:CaO19.14217 KEGG:cal:CaO19.6955
Uniprot:Q59SR4
Length = 466
Score = 181 (68.8 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 43/104 (41%), Positives = 64/104 (61%)
Query: 35 VACITGDYAMQNVILQMGLRLL-APGGMQIRQLHRWILKCHACYTIT--AEIGRI--FCP 89
VA TGD+A QNV +Q+G++LL A G QI ++ ++ +CHAC+ +T ++ GR FCP
Sbjct: 267 VALATGDFACQNVAMQIGIKLLNAMSGKQITRVRNYMYRCHACFRLTPMSKDGRPKHFCP 326
Query: 90 KCGNGGTLRKVAVTV-GENGIVLASRRPRITL--RGTKFSLPMP 130
KCG G TL + AV+V + G + + RG ++SLP P
Sbjct: 327 KCG-GNTLLRCAVSVDNKTGKITPHLKQNFQWIRRGERYSLPSP 369
>SGD|S000005582 [details] [associations]
symbol:NOB1 "Protein involved in proteasomal and 40S
ribosomal subunit biogenesis" species:4932 "Saccharomyces
cerevisiae" [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IDA;IPI] [GO:0070181 "SSU rRNA binding" evidence=IDA]
[GO:0043248 "proteasome assembly" evidence=IMP;IPI] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEP;IMP] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030688 "preribosome, small subunit
precursor" evidence=IDA] [GO:0090305 "nucleic acid phosphodiester
bond hydrolysis" evidence=IEA] [GO:0004521 "endoribonuclease
activity" evidence=IDA] [GO:0030490 "maturation of SSU-rRNA"
evidence=IDA] SGD:S000005582 InterPro:IPR006596 GO:GO:0005783
GO:GO:0005737 GO:GO:0005730 EMBL:BK006948 GO:GO:0046872
GO:GO:0043248 GO:GO:0004521 EMBL:Z70678 GO:GO:0070181 GO:GO:0000462
SMART:SM00670 GO:GO:0030688 eggNOG:COG1439 HOGENOM:HOG000159692
KO:K11883 InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY GeneTree:ENSGT00390000015857
HSSP:Q8BW10 OrthoDB:EOG4CRQ7R EMBL:Z74964 PIR:S66939
RefSeq:NP_014699.1 ProteinModelPortal:Q08444 SMR:Q08444
DIP:DIP-6440N IntAct:Q08444 MINT:MINT-621960 STRING:Q08444
PaxDb:Q08444 PeptideAtlas:Q08444 EnsemblFungi:YOR056C GeneID:854221
KEGG:sce:YOR056C CYGD:YOR056c NextBio:976086 Genevestigator:Q08444
Uniprot:Q08444
Length = 459
Score = 164 (62.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 43/121 (35%), Positives = 67/121 (55%)
Query: 19 ECSEQS-WMLRSLSESTVACITGDYAMQNVILQMGLRLLA-PGGMQIRQLHRWILKCHAC 76
E SE+ + + E+ VA TGD+A+QNV LQM L L+ G++I+++ ++L+CHAC
Sbjct: 248 EASEEDRHVALNRPENQVALATGDFAVQNVALQMNLNLMNFMSGLKIKRIRNYMLRCHAC 307
Query: 77 YTI--TAEIGRI--FCPKCGNGGTLRKVAVTV-GENGIVLASRRPRITL--RGTKFSLPM 129
+ I + G+ FC CG GTL + AV+V G V + RG ++S+
Sbjct: 308 FKIFPLPKDGKPKHFCASCGGQGTLLRCAVSVDSRTGNVTPHLKSNFQWNNRGNRYSVAS 367
Query: 130 P 130
P
Sbjct: 368 P 368
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 171 171 0.00090 108 3 11 22 0.38 32
31 0.47 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 594 (63 KB)
Total size of DFA: 156 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.79u 0.11s 14.90t Elapsed: 00:00:01
Total cpu time: 14.79u 0.11s 14.90t Elapsed: 00:00:01
Start: Mon May 20 18:52:21 2013 End: Mon May 20 18:52:22 2013