BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030782
(171 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 291 bits (744), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 143/173 (82%), Positives = 154/173 (89%), Gaps = 3/173 (1%)
Query: 2 KTSGSKNENG-SKAEVEASSAAGNKPAE-SSKPSEPP-KDYIHVRARRGQATDSHSLAER 58
K SGS+NEN S+AE+EASSAA NKPAE SSKPSEPP +DYIHVR+RRGQATDSHSLAER
Sbjct: 100 KISGSRNENNDSRAEIEASSAANNKPAEPSSKPSEPPMQDYIHVRSRRGQATDSHSLAER 159
Query: 59 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
ARRE+I ERMKILQDLVPGCNKVIGKAL LDEIINYIQSLQ QVEFLSMKLEAVNSRM+
Sbjct: 160 ARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQVEFLSMKLEAVNSRMST 219
Query: 119 TPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
+P IEG HPKDLG Q FDATGMIFG Q R+Y QGSQ +WLHMQVGGSF+RAT
Sbjct: 220 SPAIEGLHPKDLGAQPFDATGMIFGPQPTRDYVQGSQPEWLHMQVGGSFKRAT 272
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 285 bits (728), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 144/173 (83%), Positives = 150/173 (86%), Gaps = 3/173 (1%)
Query: 2 KTSGSKNENG-SKAEVEASSAAGNKPAE-SSKPSEPPK-DYIHVRARRGQATDSHSLAER 58
K SGS++EN S+AE EASSAA NK AE SSKPSEPPK DYIHVRARRGQATDSHSLAER
Sbjct: 41 KISGSRSENNDSRAETEASSAANNKTAEQSSKPSEPPKQDYIHVRARRGQATDSHSLAER 100
Query: 59 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
ARREKISERM +LQDLVPGCNKVIGKALVLDEIINYIQSLQ QVEFLSMKLEAVNSRMN
Sbjct: 101 ARREKISERMNMLQDLVPGCNKVIGKALVLDEIINYIQSLQCQVEFLSMKLEAVNSRMNT 160
Query: 119 TPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
+PT E HPKDLG Q F ATGMI G Q REY QGSQ +WLHMQVGGSFERAT
Sbjct: 161 SPTTEHLHPKDLGAQPFVATGMISGPQPTREYVQGSQSEWLHMQVGGSFERAT 213
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/172 (82%), Positives = 150/172 (87%), Gaps = 3/172 (1%)
Query: 1 MKTSGSKNENG-SKAEVEASSAAGNKPAE-SSKPSEPPK-DYIHVRARRGQATDSHSLAE 57
MK SGS+NENG SKAEVEASSA AE +SK SEPPK DYIHVRARRGQATDSHSLAE
Sbjct: 102 MKISGSQNENGKSKAEVEASSANDKNAAEQNSKISEPPKQDYIHVRARRGQATDSHSLAE 161
Query: 58 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM
Sbjct: 162 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMG 221
Query: 118 LTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFER 169
+ PT+EGFHPKD Q FDATGMIFG Q AR+YAQ S +WLHMQ+GG+ ER
Sbjct: 222 MNPTVEGFHPKDADAQPFDATGMIFGPQVARDYAQASHHEWLHMQIGGNLER 273
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 281 bits (718), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 141/174 (81%), Positives = 153/174 (87%), Gaps = 3/174 (1%)
Query: 1 MKTSGSKNEN-GSK-AEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAE 57
MKT SKN N GSK AEVEASSA G+KP ++SKP+EPPK DYIHVRARRGQATDSHSLAE
Sbjct: 49 MKTPVSKNGNTGSKEAEVEASSADGSKPDKNSKPAEPPKQDYIHVRARRGQATDSHSLAE 108
Query: 58 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
RARRE+ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ+QVEFLSMKLEAVNSR+N
Sbjct: 109 RARRERISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQQQVEFLSMKLEAVNSRIN 168
Query: 118 LTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
+ P+ EGFH KDLG Q D GMIFGSQTAREYAQG +WL M VGG+F+RAT
Sbjct: 169 VNPSFEGFHSKDLGLQPIDGAGMIFGSQTAREYAQGLHPEWLQMHVGGNFKRAT 222
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 278 bits (712), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 142/173 (82%), Positives = 150/173 (86%), Gaps = 4/173 (2%)
Query: 1 MKTSGSKNENG-SKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAER 58
MK S + +ENG SKAE+EASS AG KPAE SKP+E K DYIHVRARRGQATDSHSLAER
Sbjct: 99 MKISRTPDENGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAER 158
Query: 59 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN
Sbjct: 159 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNH 218
Query: 119 TPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
T+EGF KDLG Q FDA MI+GSQ REYAQGSQ +WLHMQVGGS ERA+
Sbjct: 219 --TVEGFPLKDLGVQTFDAAAMIYGSQATREYAQGSQPEWLHMQVGGSIERAS 269
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 278 bits (710), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 142/173 (82%), Positives = 150/173 (86%), Gaps = 4/173 (2%)
Query: 1 MKTSGSKNENG-SKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAER 58
MK S + +ENG SKAE+EASS AG KPAE SKP+E K DYIHVRARRGQATDSHSLAER
Sbjct: 114 MKISRTPDENGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAER 173
Query: 59 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN
Sbjct: 174 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN- 232
Query: 119 TPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
T+EGF KDLG Q FDA MI+GSQ REYAQGSQ +WLHMQVGGS ERA+
Sbjct: 233 -HTVEGFPLKDLGVQTFDAAAMIYGSQATREYAQGSQPEWLHMQVGGSIERAS 284
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/175 (80%), Positives = 147/175 (84%), Gaps = 4/175 (2%)
Query: 1 MKTSGSKNEN-GSKAEVEASSAAGNKPAE-SSKPSEPPK-DYIHVRARRGQATDSHSLAE 57
MK GS EN G KAE EASSA GNK +E S+KP E PK DYIHVRARRGQATDSHSLAE
Sbjct: 95 MKLGGSSVENDGFKAEAEASSAGGNKSSEQSNKPCEAPKQDYIHVRARRGQATDSHSLAE 154
Query: 58 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN
Sbjct: 155 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 214
Query: 118 LTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQ-QDWLHMQVGGSFERAT 171
+ PTI+GF KD+G Q FD GM+FGSQ AR YAQGS WLHMQ+GG FER T
Sbjct: 215 MNPTIDGFPSKDVGTQPFDIAGMVFGSQAARGYAQGSSPPGWLHMQIGGGFERTT 269
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/172 (75%), Positives = 147/172 (85%), Gaps = 1/172 (0%)
Query: 1 MKTSGSKNENGS-KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERA 59
MK S++ENG KAEV+ +S+ G K AE S EPPKDYIHVRARRGQATDSHSLAERA
Sbjct: 105 MKVVESRDENGGIKAEVDPNSSDGKKLAEQSPKPEPPKDYIHVRARRGQATDSHSLAERA 164
Query: 60 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN+T
Sbjct: 165 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNIT 224
Query: 120 PTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
P IEGF K++ Q +DA G+++GSQ AR+Y QG+Q +WLHMQ+GG FER +
Sbjct: 225 PGIEGFTVKNIVNQPYDAAGILYGSQAARDYTQGAQTEWLHMQIGGGFERTS 276
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/169 (79%), Positives = 140/169 (82%), Gaps = 4/169 (2%)
Query: 1 MKTSGSKNEN-GSKAEVEASSAAGNKPAE-SSKPSEPPK-DYIHVRARRGQATDSHSLAE 57
MK GS EN G KAE EASS GNK +E S+KP E PK DYIHVRARRGQATDSHSLAE
Sbjct: 70 MKVGGSSFENDGFKAEAEASSVGGNKSSEQSNKPCEAPKPDYIHVRARRGQATDSHSLAE 129
Query: 58 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
RARREKISERMKILQDL PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN
Sbjct: 130 RARREKISERMKILQDLAPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 189
Query: 118 LTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQD-WLHMQVGG 165
PTI+GF KD+G Q FD GM+FGSQ AR YAQGS WLHMQ+GG
Sbjct: 190 TNPTIDGFPSKDVGTQPFDIAGMVFGSQAARGYAQGSSHPGWLHMQIGG 238
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/175 (74%), Positives = 150/175 (85%), Gaps = 7/175 (4%)
Query: 4 SGSKNENGS--KAEVEASSAAGNK-PAESSKPS---EPPK-DYIHVRARRGQATDSHSLA 56
SGS+++NG+ EV+A+S AGNK P +++KPS +PPK DYIHVRARRGQATDSHSLA
Sbjct: 55 SGSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATDSHSLA 114
Query: 57 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
ERARREKISERMKILQD+VPGCNKVIGKALVLDEIINYIQSLQ QVEFLSMKLEAVNSR+
Sbjct: 115 ERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRL 174
Query: 117 NLTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
+++PTIE F K++G Q FD G+IFGSQ AR YAQGSQ WLHMQ+ G FE+AT
Sbjct: 175 SMSPTIECFPSKEVGTQPFDLAGIIFGSQPARGYAQGSQPGWLHMQIAGGFEKAT 229
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 150/217 (69%), Gaps = 48/217 (22%)
Query: 1 MKTSGSKNENG-SKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAER 58
MK S + +ENG SKAE+EASS AG KPAE SKP+E K DYIHVRARRGQATDSHSLAER
Sbjct: 114 MKISRTPDENGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAER 173
Query: 59 --------------------------------------------ARREKISERMKILQDL 74
ARREKISERMKILQDL
Sbjct: 174 VMQFYTLLIFCFLVVPQMPKLKRIGLSWNSRSRCRCIGVSVYINARREKISERMKILQDL 233
Query: 75 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQA 134
VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN T+EGF KDLG Q
Sbjct: 234 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--HTVEGFPLKDLGVQT 291
Query: 135 FDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
FDA MI+GSQ REYAQGSQ +WLHMQVGGS ERA+
Sbjct: 292 FDAAAMIYGSQATREYAQGSQPEWLHMQVGGSIERAS 328
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 255 bits (651), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 148/175 (84%), Gaps = 7/175 (4%)
Query: 4 SGSKNENGS--KAEVEASSAAGNK-PAESSKPS---EPPK-DYIHVRARRGQATDSHSLA 56
SGS+++NG+ EV+A+S AGNK P +++KPS +PPK DYIHVRARRGQATDSHSLA
Sbjct: 55 SGSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATDSHSLA 114
Query: 57 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
ERARREKISERMKILQD+VPGCNKVIGKALVLDEIINYIQSLQ QVEFL MKLEAVNSR+
Sbjct: 115 ERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLFMKLEAVNSRL 174
Query: 117 NLTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
+++P IE F K++G Q FD G+IFGSQ AR YAQGSQ WLHMQ+ G FE+AT
Sbjct: 175 SMSPIIECFPSKEVGTQPFDLAGIIFGSQPARGYAQGSQPGWLHMQIAGGFEKAT 229
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 129/171 (75%), Positives = 138/171 (80%), Gaps = 5/171 (2%)
Query: 4 SGSKNEN-GSKAEVEASSAAGNKPAE-SSKPSEPPK-DYIHVRARRGQATDSHSLAERAR 60
SG NEN SK E EASS NK A+ S++PSE PK DYIHVRARRGQATDSHSLAERAR
Sbjct: 90 SGDGNENSNSKTEAEASSGLCNKLADQSNQPSEAPKQDYIHVRARRGQATDSHSLAERAR 149
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 120
REKISERM ILQDLVPGCNKVIGKA VLDEIINYIQ+LQRQVEFLSMKLEAVNS+MN P
Sbjct: 150 REKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNSQMN--P 207
Query: 121 TIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
IEGF PKD G QA++ + F SQ REYAQGS DWLHMQVGG+ R T
Sbjct: 208 GIEGFPPKDFGAQAYETPSLAFSSQAPREYAQGSATDWLHMQVGGALGRVT 258
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 125/150 (83%), Positives = 132/150 (88%), Gaps = 5/150 (3%)
Query: 25 KPAE-SSKP-SEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 81
KPAE S+KP SEPPK DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV
Sbjct: 126 KPAEQSAKPASEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 185
Query: 82 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMI 141
IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR+N IE F PKD G+QAFD G+
Sbjct: 186 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNS--GIEAFPPKDFGQQAFDPAGIP 243
Query: 142 FGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
FGSQ REY++GS DWLHMQ+GGSFER T
Sbjct: 244 FGSQAPREYSRGSSPDWLHMQIGGSFERTT 273
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 248 bits (633), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 142/173 (82%), Gaps = 6/173 (3%)
Query: 1 MKTSGSKNEN-GSKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAER 58
+KTSG+ +EN SK+E E SS G ++++P E PK DYIHVRARRGQATDSHSLAER
Sbjct: 97 LKTSGNLDENHDSKSEAEPSS--GKHVEQNTQPPELPKQDYIHVRARRGQATDSHSLAER 154
Query: 59 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN+RM
Sbjct: 155 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRM-- 212
Query: 119 TPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
TP IE F KD G+Q FDA GM FGSQ R+Y +G+ +WLHMQVGG FER +
Sbjct: 213 TPGIEAFPSKDFGQQTFDAAGMAFGSQATRDYNRGTSPEWLHMQVGGGFERTS 265
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 141/172 (81%), Gaps = 8/172 (4%)
Query: 1 MKTSGSKNEN-GSKAEVEASSAAGNKPAESS-KPSEPPK-DYIHVRARRGQATDSHSLAE 57
+KTSGS++EN SK EVE SS KP E + + ++PPK D+IHVRARRGQATDSHSLAE
Sbjct: 41 LKTSGSRDENRDSKTEVETSSG---KPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAE 97
Query: 58 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN
Sbjct: 98 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 157
Query: 118 LTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFER 169
IEGF KD G+Q FDA G+ + SQ REY + S +WLHMQVGG F+R
Sbjct: 158 --SGIEGFPSKDFGQQTFDAAGVAYSSQATREYGRASSPEWLHMQVGGGFDR 207
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 244 bits (624), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 139/172 (80%), Gaps = 13/172 (7%)
Query: 1 MKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERA 59
+KT GS + SKAE E E++KP+EPPK DYIHVRARRGQATDSHSLAERA
Sbjct: 112 LKTGGSNENHESKAEGE----------ETAKPAEPPKQDYIHVRARRGQATDSHSLAERA 161
Query: 60 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR L+
Sbjct: 162 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR--LS 219
Query: 120 PTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
P IEGF K+ G+ +D +GM FGSQ++REY + + +WLHMQ+GG FER T
Sbjct: 220 PGIEGFPSKEFGQPPYDPSGMAFGSQSSREYGRDTSPEWLHMQIGGGFERTT 271
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 244 bits (623), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 128/172 (74%), Positives = 140/172 (81%), Gaps = 8/172 (4%)
Query: 1 MKTSGSKNEN-GSKAEVEASSAAGNKPAESSKPS-EPPK-DYIHVRARRGQATDSHSLAE 57
+KTSGS++EN SK EVE SS KP E + S +PPK D+IHVRARRGQATDSHSLAE
Sbjct: 110 LKTSGSRDENRDSKTEVETSSG---KPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAE 166
Query: 58 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN
Sbjct: 167 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 226
Query: 118 LTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFER 169
IEGF KD G+Q FDA G+ + SQ REY + S +WLHMQVGG F+R
Sbjct: 227 --SGIEGFPSKDFGQQTFDAAGVAYSSQATREYGRASSPEWLHMQVGGGFDR 276
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/172 (70%), Positives = 139/172 (80%), Gaps = 4/172 (2%)
Query: 1 MKTSGSKNENG-SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERA 59
+KT+ +++N SK E E S + ++ + P +P +DYIHVRARRGQATDSHSLAERA
Sbjct: 6 VKTAACRDDNHESKTEAEPRSGKTEQNSQPT-PEQPKQDYIHVRARRGQATDSHSLAERA 64
Query: 60 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR+
Sbjct: 65 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIG-- 122
Query: 120 PTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
P IE F PKD G+Q FD TG+ FGSQ REY++GS +WLHMQ+GG FER T
Sbjct: 123 PGIEVFPPKDYGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 174
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/172 (70%), Positives = 139/172 (80%), Gaps = 4/172 (2%)
Query: 1 MKTSGSKNENG-SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERA 59
+KT+ +++N SK E E S + ++ + P +P +DYIHVRARRGQATDSHSLAERA
Sbjct: 130 VKTAACRDDNHESKTEAEPRSGKTEQNSQPT-PEQPKQDYIHVRARRGQATDSHSLAERA 188
Query: 60 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR+
Sbjct: 189 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIG-- 246
Query: 120 PTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
P IE F PKD G+Q FD TG+ FGSQ REY++GS +WLHMQ+GG FER T
Sbjct: 247 PGIEVFPPKDYGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 298
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 242 bits (617), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/173 (72%), Positives = 137/173 (79%), Gaps = 5/173 (2%)
Query: 1 MKTSGSKNENGSKAEVEASSAAGNKPAE-SSKPSEPPK-DYIHVRARRGQATDSHSLAER 58
MK+ + N K E EASS NK A+ +++P E PK DYIHVRARRGQATDSHSLAER
Sbjct: 17 MKSRDEETAN-QKXEAEASSGLCNKLADQNTQPLEAPKQDYIHVRARRGQATDSHSLAER 75
Query: 59 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
ARREKISERMKILQDLVPGCNKVIGKA VLDEIINYIQ+LQRQVEFLSMKLEAVNSR N
Sbjct: 76 ARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNSRTN- 134
Query: 119 TPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
IEGF PKD G QA+DA + FG Q REY QGS +WLHMQVGG+FER T
Sbjct: 135 -SGIEGFPPKDFGAQAYDAPNLAFGLQAPREYVQGSATEWLHMQVGGAFERVT 186
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 242 bits (617), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 127/168 (75%), Positives = 133/168 (79%), Gaps = 8/168 (4%)
Query: 7 KNENGSKAEVEASSAAGNKPAESS--KPSEPPK-DYIHVRARRGQATDSHSLAERARREK 63
K K E E SS K AE S PSEPPK DYIHVRARRGQATDSHSLAERARREK
Sbjct: 102 KTSESGKGEGETSSG---KLAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREK 158
Query: 64 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIE 123
ISERMKILQD+VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR L P IE
Sbjct: 159 ISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR--LAPRIE 216
Query: 124 GFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
F PKD +Q FD TGM F SQ REY++GS +WLHMQVGG +ERAT
Sbjct: 217 VFPPKDFDQQTFDTTGMPFASQATREYSRGSSPEWLHMQVGGGYERAT 264
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 127/173 (73%), Positives = 137/173 (79%), Gaps = 6/173 (3%)
Query: 5 GSKNENGSKAEV-EASSAAG--NKPAESSKPSE--PPK-DYIHVRARRGQATDSHSLAER 58
GS ENG + EASS AG N +S+KPSE PPK DYIHVRARRGQATDSHS+AER
Sbjct: 76 GSTVENGGGLKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIAER 135
Query: 59 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
ARREKISERMKILQDLVPGCNK+IGKALVLDEIINYIQSLQ QVEFLSMKLEAVNSR N+
Sbjct: 136 ARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANM 195
Query: 119 TPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
PT EGF KD+ Q FD G+I+ S AR YAQGS WLHMQ+GG FE AT
Sbjct: 196 NPTNEGFPSKDVVTQPFDIAGVIYESHAARGYAQGSHPGWLHMQIGGGFEGAT 248
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/168 (74%), Positives = 133/168 (79%), Gaps = 8/168 (4%)
Query: 7 KNENGSKAEVEASSAAGNKPAESS--KPSEPPK-DYIHVRARRGQATDSHSLAERARREK 63
K K E E+ S KPA+ S PSEPPK DYIHVRARRGQATDSHSLAERARREK
Sbjct: 93 KTSESGKGEGESCSG---KPAKQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREK 149
Query: 64 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIE 123
ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR + P IE
Sbjct: 150 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR--IAPGIE 207
Query: 124 GFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
F PKD +Q FD TGM F SQ R+Y++GS +WLHMQVG FERAT
Sbjct: 208 VFPPKDFDQQTFDTTGMPFASQATRDYSRGSSPEWLHMQVGDGFERAT 255
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/150 (80%), Positives = 124/150 (82%), Gaps = 5/150 (3%)
Query: 25 KPAESS--KPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 81
KPAE S PSEPPK DYIHVRARRGQATDSHSLAERARREKISERMK LQDLVPGCNKV
Sbjct: 113 KPAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKV 172
Query: 82 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMI 141
IGKALVLDEIINYIQSLQRQ EFLSMKLEAVNSRM IE F PKD +Q FD T M
Sbjct: 173 IGKALVLDEIINYIQSLQRQAEFLSMKLEAVNSRMES--GIEVFPPKDFDQQTFDTTDMP 230
Query: 142 FGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
F SQ REY++GS +WLHMQVGG FERAT
Sbjct: 231 FASQATREYSRGSSSEWLHMQVGGGFERAT 260
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 110/134 (82%), Positives = 117/134 (87%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS
Sbjct: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 146
Query: 98 LQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQD 157
LQ QVEFLSMKLEAVNSR N+ PTI+ F KD+G Q FD G+IFGSQ +R YAQGSQ
Sbjct: 147 LQHQVEFLSMKLEAVNSRFNMNPTIDCFSSKDVGTQPFDLAGIIFGSQASRGYAQGSQPG 206
Query: 158 WLHMQVGGSFERAT 171
WLHMQ+ G FE+ T
Sbjct: 207 WLHMQITGGFEKTT 220
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 234 bits (597), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 119/173 (68%), Positives = 141/173 (81%), Gaps = 11/173 (6%)
Query: 6 SKNENGS--KAEVEASSAAGNK-PAESSKPSE----PPKDYIHVRARRGQATDSHSLAER 58
S+++NG+ EV+A+S AGNK P ++ KPS P +DYIHVRARRGQATD+HSLAER
Sbjct: 56 SQDQNGALKVGEVDATSVAGNKLPQQTPKPSSSEQAPKQDYIHVRARRGQATDNHSLAER 115
Query: 59 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
ARREKISERMKILQDLVPGCNKVIGKA VLD IINY+QSLQRQVEFLSMKLEAV+SR+++
Sbjct: 116 ARREKISERMKILQDLVPGCNKVIGKAFVLDGIINYVQSLQRQVEFLSMKLEAVSSRLSM 175
Query: 119 TPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
PT+E F K++ QA G+IFGSQ A+ YAQGSQ WLHMQ+ G FE+AT
Sbjct: 176 KPTLECFPSKEVCTQA----GIIFGSQPAKGYAQGSQMGWLHMQIAGGFEKAT 224
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/178 (70%), Positives = 139/178 (78%), Gaps = 9/178 (5%)
Query: 1 MKTSGSKNEN-GSKAEVEASSAAGNKPAE-SSKPSEPPKDYIHVRARRGQATDSHSLAER 58
MK SGS+ EN GSK +EASS+ G K AE SS+P EPPKDYIHVRARRGQATDSHSLAER
Sbjct: 126 MKISGSRYENNGSKTGIEASSSGGGKSAEKSSQPPEPPKDYIHVRARRGQATDSHSLAER 185
Query: 59 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE VNS +N
Sbjct: 186 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGVN- 244
Query: 119 TPTIEGFHPKDLGEQA---FDATGMIFGSQTAREYAQGSQ--QDWLHMQVGGSFERAT 171
P I F KD+ + A F+A M+F SQ+AR + Q +WL M +GGS +R T
Sbjct: 245 -PAINCFPSKDVNQLAPTTFEAAAMMFASQSARGFEPAPQPHPEWLRMHLGGSLDRGT 301
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/156 (75%), Positives = 127/156 (81%), Gaps = 4/156 (2%)
Query: 17 EASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 75
EA ++G ++P EP K DYIHVRARRGQATDSHSLAERARREKISERMKILQDLV
Sbjct: 48 EAEPSSGKHVEHKTQPPEPSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 107
Query: 76 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAF 135
PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN+RMN P IE F KD G Q F
Sbjct: 108 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMN--PGIEVFASKDFG-QTF 164
Query: 136 DATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
D GM FGSQ REY++G+ +WLHMQVGG FER +
Sbjct: 165 DTAGMAFGSQATREYSRGTSPEWLHMQVGGGFERTS 200
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/165 (74%), Positives = 134/165 (81%), Gaps = 8/165 (4%)
Query: 1 MKTSGSKNEN-GSKAEVEASSAAGNKPAESSKPS-EPPK-DYIHVRARRGQATDSHSLAE 57
+KTSGS++EN SK EVE SS KP E + S +PPK D+IHVRARRGQATDSHSLAE
Sbjct: 110 LKTSGSRDENRDSKTEVETSSG---KPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAE 166
Query: 58 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN
Sbjct: 167 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 226
Query: 118 LTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQ 162
IEGF KD G+Q FDA G+ + SQ REY + S +WLHMQ
Sbjct: 227 --SGIEGFPSKDFGQQTFDAAGVAYSSQATREYGRASSPEWLHMQ 269
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 133/175 (76%), Gaps = 10/175 (5%)
Query: 2 KTSGSKNENG-SKAEVEASSAAGNKPAESSKPSEPPKD----YIHVRARRGQATDSHSLA 56
K SG+KNE G K E EASS K AE S P YIHVRARRGQATDSHSLA
Sbjct: 109 KASGNKNEGGDGKVEGEASSG---KHAEQSSKPPPSDPPKQDYIHVRARRGQATDSHSLA 165
Query: 57 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR+
Sbjct: 166 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRL 225
Query: 117 NLTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
N IE F PKD G+Q FD GM F SQ RE ++GS +WLHMQVGG FER T
Sbjct: 226 NT--GIEAFPPKDYGQQTFDLAGMPFVSQATREPSRGSSPEWLHMQVGGGFERTT 278
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/160 (72%), Positives = 131/160 (81%), Gaps = 6/160 (3%)
Query: 13 KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 72
KAE E+ G + + + EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQ
Sbjct: 110 KAEAES---LGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 166
Query: 73 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGE 132
DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN P IE F PK+ G+
Sbjct: 167 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEFGQ 224
Query: 133 QAFDATGMIFGSQTAREYAQGSQQDWLHMQVG-GSFERAT 171
QAF+ + FGSQ+ REY++G+ +WLHMQ+G G FER +
Sbjct: 225 QAFENPEIQFGSQSTREYSRGASPEWLHMQIGSGGFERTS 264
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/160 (72%), Positives = 131/160 (81%), Gaps = 6/160 (3%)
Query: 13 KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 72
KAE E+ G + + + EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQ
Sbjct: 110 KAEAES---LGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 166
Query: 73 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGE 132
DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN P IE F PK+ G+
Sbjct: 167 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEFGQ 224
Query: 133 QAFDATGMIFGSQTAREYAQGSQQDWLHMQVG-GSFERAT 171
QAF+ + FGSQ+ REY++G+ +WLHMQ+G G FER +
Sbjct: 225 QAFENPEIQFGSQSTREYSRGASPEWLHMQIGSGGFERTS 264
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/139 (79%), Positives = 120/139 (86%), Gaps = 3/139 (2%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN
Sbjct: 128 EPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 187
Query: 94 YIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQG 153
YIQSLQRQVEFLSMKLEAVNSRMN P IE F PK+ G+Q F+ M FGSQ+ REY +G
Sbjct: 188 YIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEFGQQTFENPEMQFGSQSTREYNRG 245
Query: 154 SQQDWLHMQVG-GSFERAT 171
+ +WLHMQ+G G FER +
Sbjct: 246 ASPEWLHMQIGSGGFERTS 264
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 125/175 (71%), Positives = 131/175 (74%), Gaps = 10/175 (5%)
Query: 2 KTSGSKNENG-SKAEVEASSAAGNKPAESSKPSEPPKD----YIHVRARRGQATDSHSLA 56
K SG+KNE G K E EASS K AE S P YIHVRARRGQATDSH LA
Sbjct: 109 KASGNKNEGGDGKVEGEASSG---KHAEQSSKPPPSDPPKQDYIHVRARRGQATDSHGLA 165
Query: 57 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR+
Sbjct: 166 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRL 225
Query: 117 NLTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
N IE F PKD G+Q FD GM F SQ RE ++G +WLHMQVGG FER T
Sbjct: 226 NT--GIEAFPPKDYGQQTFDLAGMPFVSQATREPSRGFSPEWLHMQVGGGFERTT 278
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 123/166 (74%), Gaps = 5/166 (3%)
Query: 6 SKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKIS 65
SK SK E +S G E+S P KDYIHVRARRGQATDSHSLAERARREKIS
Sbjct: 79 SKTSGNSKGEENSS---GKHAEETSDEPHPKKDYIHVRARRGQATDSHSLAERARREKIS 135
Query: 66 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
ERMK LQDLVPGCNKVIGKALVLDEIINYIQSL QVEFLSMKLEAVNSR TP +E F
Sbjct: 136 ERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQVEFLSMKLEAVNSRP--TPGMEVF 193
Query: 126 HPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
PK +Q FD T + F S REY++G+ +WLHMQ+GG FER +
Sbjct: 194 PPKTFDQQTFDTTAIPFASHATREYSRGASPEWLHMQLGGGFERTS 239
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 116/176 (65%), Positives = 130/176 (73%), Gaps = 8/176 (4%)
Query: 1 MKTSGSKNENGSKAEVEASSAAGNKPAESSK---PSEPPK-DYIHVRARRGQATDSHSLA 56
+K S ++N S EA + +GN + K P EPPK DYIHVRARRGQATDSHSLA
Sbjct: 84 LKPMKSSDKNDS-LRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLA 142
Query: 57 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
ERARREKISERMKILQDLVPGCNKVIGKA VLDEIINYIQSLQ QVEFLSMKLEAVNS M
Sbjct: 143 ERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFLSMKLEAVNSHM 202
Query: 117 NLTPTIEGFHPKDLGEQAFD-ATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
I F KD G Q ++ A G+ F QT RE+AQGS +WLHMQ+G ++ER T
Sbjct: 203 --INGIVAFPSKDFGAQPYNTAAGLTFDPQTTREFAQGSTSEWLHMQIGNAYERVT 256
>gi|225456606|ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isoform 2 [Vitis vinifera]
Length = 262
Score = 218 bits (556), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/173 (69%), Positives = 128/173 (73%), Gaps = 26/173 (15%)
Query: 1 MKTSGSKNENG-SKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAER 58
MK S + +ENG SKAE+EASS AG KPAE SKP+E K DYIHVRARRGQATDSHSLAER
Sbjct: 114 MKISRTPDENGGSKAELEASSVAGEKPAEESKPAEQSKQDYIHVRARRGQATDSHSLAER 173
Query: 59 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN
Sbjct: 174 ----------------------VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNH 211
Query: 119 TPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
T +EGF KDLG Q FDA MI+GSQ REYAQGSQ +WLHMQVGGS ERA+
Sbjct: 212 T--VEGFPLKDLGVQTFDAAAMIYGSQATREYAQGSQPEWLHMQVGGSIERAS 262
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 133/172 (77%), Gaps = 4/172 (2%)
Query: 2 KTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARR 61
K+SG + ++AE ++ +A+ + P P +DYIHVRARRGQATDSHSLAERARR
Sbjct: 96 KSSGDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARR 155
Query: 62 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPT 121
EKISERMKILQDLVPGCNKVIGKA VLDEIINYIQ+LQRQVEFLSMKLEAVN+ +N
Sbjct: 156 EKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVN--NG 213
Query: 122 IEGFHPKDLGEQAFD-ATGMIFGSQTAREYAQGSQ-QDWLHMQVGGSFERAT 171
IE F PKD G Q ++ A G+ F QT REYAQGS +WLHMQ+GG++ER T
Sbjct: 214 IEAFPPKDFGAQVYNTAPGLTFDPQTPREYAQGSTPSEWLHMQIGGTYERVT 265
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 133/172 (77%), Gaps = 4/172 (2%)
Query: 2 KTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARR 61
K+SG + ++AE ++ +A+ + P P +DYIHVRARRGQATDSHSLAERARR
Sbjct: 96 KSSGDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARR 155
Query: 62 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPT 121
EKISERMKILQDLVPGCNKVIGKA VLDEIINYIQ+LQRQVEFLSMKLEAVN+ +N
Sbjct: 156 EKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVN--NG 213
Query: 122 IEGFHPKDLGEQAFD-ATGMIFGSQTAREYAQGSQ-QDWLHMQVGGSFERAT 171
IE F PKD G Q ++ A G+ F QT REYAQGS +WLHMQ+GG++ER T
Sbjct: 214 IEAFPPKDFGAQVYNTAPGLTFDPQTPREYAQGSTPSEWLHMQIGGTYERVT 265
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 133/172 (77%), Gaps = 4/172 (2%)
Query: 2 KTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARR 61
K+SG + ++AE ++ +A+ + P P +DYIHVRARRGQATDSHSLAERARR
Sbjct: 55 KSSGDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARR 114
Query: 62 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPT 121
EKISERMKILQDLVPGCNKVIGKA VLDEIINYIQ+LQRQVEFLSMKLEAVN+ +N
Sbjct: 115 EKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVN--NG 172
Query: 122 IEGFHPKDLGEQAFD-ATGMIFGSQTAREYAQGSQ-QDWLHMQVGGSFERAT 171
IE F PKD G Q ++ A G+ F QT REYAQGS +WLHMQ+GG++ER T
Sbjct: 173 IEAFPPKDFGAQVYNTAPGLTFDPQTPREYAQGSTPSEWLHMQIGGTYERVT 224
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 134/175 (76%), Gaps = 7/175 (4%)
Query: 2 KTSGSKNENGS-KAEVEASSAAGNKPAESSKPS-EPPK-DYIHVRARRGQATDSHSLAER 58
KT+ S N GS + EVE S + K + P+ EPPK DYIHVRARRGQATDSHSLAER
Sbjct: 83 KTNKSSNNKGSLRTEVETDSRSAGKAVSKNIPAAEPPKQDYIHVRARRGQATDSHSLAER 142
Query: 59 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
ARREKISERMK+LQDLVPGCNKVIGKA VLDEIINYIQSLQ QVEFLSMKLEAVN++ N
Sbjct: 143 ARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLSMKLEAVNAQAN- 201
Query: 119 TPTIEGFHPKDLGEQAFD-ATGMIFGSQTAREYAQG-SQQDWLHMQVGGSFERAT 171
+E F KD G Q ++ A G+ F +QT+REYAQG S +WLHMQ+G +ER +
Sbjct: 202 -QGVEVFPAKDYGSQTYNTAPGLTFDTQTSREYAQGTSTSEWLHMQIGSGYERVS 255
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/172 (66%), Positives = 133/172 (77%), Gaps = 7/172 (4%)
Query: 5 GSKNENGS---KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARR 61
SK++N S +AE ++ +A+ + P P +DYIHVRARRGQATDSHSLAERARR
Sbjct: 94 ASKSDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARR 153
Query: 62 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPT 121
EKISERMKILQDLVPGCNKVIGKA VLDEIINYIQ+LQRQVEFLSMKLEAVN+ +N
Sbjct: 154 EKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVN--NG 211
Query: 122 IEGFHPKDLGEQAFD-ATGMIFGSQTAREYAQGSQ-QDWLHMQVGGSFERAT 171
IE F PKD G Q ++ A G+ F QT REYAQGS +WLHMQ+GG++ER T
Sbjct: 212 IEAFPPKDFGAQVYNTAPGLTFDPQTPREYAQGSTPSEWLHMQIGGTYERVT 263
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 132/175 (75%), Gaps = 7/175 (4%)
Query: 2 KTSGSKNENGS-KAEVEASSAAGNKPAESSKPS-EPPK-DYIHVRARRGQATDSHSLAER 58
KT+ S N NGS + E E + K S P+ EPPK DYIHVRARRGQATDSHSLAER
Sbjct: 81 KTNKSSNNNGSLRTEAETDPRSAGKAVSKSLPAAEPPKQDYIHVRARRGQATDSHSLAER 140
Query: 59 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
ARREKISERMK+LQDLVPGCNKVIGKA VLDEIINYIQSLQ QVEFLSMKLEAVN+ N
Sbjct: 141 ARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLSMKLEAVNAHANQ 200
Query: 119 TPTIEGFHPKDLGEQAFD-ATGMIFGSQTAREYAQG-SQQDWLHMQVGGSFERAT 171
+E F KD G + ++ A G+ F +QT+REYAQG S +WLHMQ+G +ER +
Sbjct: 201 --GVEAFPVKDYGAETYNTAPGLTFDTQTSREYAQGTSTSEWLHMQIGSGYERVS 253
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 102/134 (76%), Positives = 110/134 (82%), Gaps = 2/134 (1%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAERARREKISERMKILQD+VPGCNKV GKALVLDEIINYIQS
Sbjct: 137 DYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQS 196
Query: 98 LQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQD 157
LQRQVEFLSMKLEAVN +N+ P E F KD G+ FD GM FGSQ REY + +
Sbjct: 197 LQRQVEFLSMKLEAVN--LNMNPETEVFPSKDFGQHTFDTAGMAFGSQATREYNHCTSPE 254
Query: 158 WLHMQVGGSFERAT 171
WLHMQVGG F+R +
Sbjct: 255 WLHMQVGGGFQRTS 268
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/142 (72%), Positives = 116/142 (81%), Gaps = 4/142 (2%)
Query: 32 PSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 90
P EPPK DYIHVRARRGQATDSHS+AERARREKISERMK+LQDLVPGCNKVIGKA VLDE
Sbjct: 101 PPEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDE 160
Query: 91 IINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFD-ATGMIFGSQTARE 149
IINYIQ+LQRQVEFLSMKLEAVN+ +N I F KD+G + F A G+ QT RE
Sbjct: 161 IINYIQALQRQVEFLSMKLEAVNAHVN--NRIASFQSKDVGAEPFHTALGLTLDPQTPRE 218
Query: 150 YAQGSQQDWLHMQVGGSFERAT 171
+AQGS +WLHMQ+G ++ER T
Sbjct: 219 HAQGSTSEWLHMQIGNTYERVT 240
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 130/188 (69%), Gaps = 20/188 (10%)
Query: 1 MKTSGSKNENGSKAEVEASSAAGNKPAESSK---PSEPPK-DYIHVRARRGQATDSHSLA 56
+K S ++N S EA + +GN + K P EPPK DYIHVRARRGQATDSHSLA
Sbjct: 84 LKPMKSSDKNDS-LRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLA 142
Query: 57 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE------------F 104
ERARREKISERMKILQDLVPGCNKVIGKA VLDEIINYIQSLQ QVE F
Sbjct: 143 ERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFMFKYLIELFLQF 202
Query: 105 LSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFD-ATGMIFGSQTAREYAQGSQQDWLHMQV 163
LSMKLEAVNS M I F KD G Q ++ A G+ F QT RE+AQGS +WLHMQ+
Sbjct: 203 LSMKLEAVNSHM--INGIVAFPSKDFGAQPYNTAAGLTFDPQTTREFAQGSTSEWLHMQI 260
Query: 164 GGSFERAT 171
G ++ER T
Sbjct: 261 GNAYERVT 268
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 132/176 (75%), Gaps = 7/176 (3%)
Query: 1 MKTSGSKNENGS-KAEVEASSAAGNKPAESSKPSEPP--KDYIHVRARRGQATDSHSLAE 57
+ + S ++NGS + + E S G+K + + P P +DYIHVRARRGQATDSHSLAE
Sbjct: 70 FRANKSSDDNGSFRTDAEGDSRNGSKVVDQNPPPPEPPKQDYIHVRARRGQATDSHSLAE 129
Query: 58 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
RARREKI+ERMKILQDLVPGCNKVIGKA VLDEIINY+Q+L+RQVEFLSMKLEAVN+ +N
Sbjct: 130 RARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQVEFLSMKLEAVNAHVN 189
Query: 118 LTPTIEGFHPKDLGEQAFD-ATGMIFGSQTAREYAQGSQ-QDWLHMQVGGSFERAT 171
+E F KD F+ A G+ F QT REYAQGS +WLHMQ+GG++ER T
Sbjct: 190 N--GVETFPSKDFSAPTFNTAPGLTFDPQTPREYAQGSPASEWLHMQIGGTYERVT 243
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/135 (72%), Positives = 109/135 (80%), Gaps = 3/135 (2%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAERARREKISERMK+LQD+VPGCNKVIGKA VLDEIINYIQS
Sbjct: 46 DYIHVRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQS 105
Query: 98 LQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFD-ATGMIFGSQTAREYAQGSQQ 156
LQRQVEFLSMKLE +N+ MN T+ F KD G ++ A + QT REYAQGS
Sbjct: 106 LQRQVEFLSMKLETINAHMN-NATV-AFPTKDFGAPPYNTAPSLTLDPQTPREYAQGSMS 163
Query: 157 DWLHMQVGGSFERAT 171
DWLHMQ+G ++ER T
Sbjct: 164 DWLHMQIGNAYERVT 178
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 124/173 (71%), Gaps = 4/173 (2%)
Query: 1 MKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERA 59
+K +N + E E +S +K A+ + P DYIHVRARRGQATDSHSLAERA
Sbjct: 81 LKQIAPSEKNDRRTEAETNSGNASKSADKKPAPKEPPKDYIHVRARRGQATDSHSLAERA 140
Query: 60 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
RREKISERMK+LQD+VPGCNKVIGKA VLDEIINYIQSLQRQVEFLSMKLEA+N+ +++
Sbjct: 141 RREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFLSMKLEAINA--HVS 198
Query: 120 PTIEGFHPKDLGEQAFD-ATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
F KD G ++ A + QT REYAQGS DWLHMQVG ++ER T
Sbjct: 199 NATVAFPTKDFGVAPYNTAPSLTLDPQTPREYAQGSMSDWLHMQVGNAYERVT 251
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 120/175 (68%), Gaps = 6/175 (3%)
Query: 2 KTSGSKNENGS-----KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLA 56
K GS++ NG + E + G+K E EPPKDYIHVRARRGQATD HSLA
Sbjct: 109 KLCGSESGNGDGSMRPEGETSSGGGGGSKATEQKNKPEPPKDYIHVRARRGQATDRHSLA 168
Query: 57 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
ERARREKISE+M LQD++PGCNK+IGKALVLDEIINYIQSLQRQVEFLSMKLE VNS
Sbjct: 169 ERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGA 228
Query: 117 NLTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
+ PTI F DLG D I+ Q A E + SQ +WLHMQV G+F R T
Sbjct: 229 STGPTIGVFPSGDLGTLPIDVHRTIYEQQEANE-TRVSQPEWLHMQVDGNFNRTT 282
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/147 (67%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
Query: 25 KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 84
K E EPPKDYIHVRARRGQATD HSLAERARREKISE+M LQD++PGCNK+IGK
Sbjct: 136 KATEQKNKPEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGK 195
Query: 85 ALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGS 144
ALVLDEIINYIQSLQRQVEFLSMKLE VNS + PTI F DLG D I+
Sbjct: 196 ALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTIGVFPSGDLGTLPIDVHRTIYEQ 255
Query: 145 QTAREYAQGSQQDWLHMQVGGSFERAT 171
Q A E + SQ +WLHMQV G+F R T
Sbjct: 256 QEANE-TRVSQPEWLHMQVDGNFNRTT 281
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/155 (63%), Positives = 112/155 (72%), Gaps = 4/155 (2%)
Query: 7 KNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISE 66
+ E+G + E E SS G+K E P KDYIHVRARRGQATD HSLAERARREKISE
Sbjct: 108 ETEDGLRREGETSSGGGSKETEEKSPL---KDYIHVRARRGQATDRHSLAERARREKISE 164
Query: 67 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFH 126
RMK LQDL+PGCNK+IGKALVLDEIINYIQSLQRQVEFLSMKLE VNS ++ P + F
Sbjct: 165 RMKFLQDLIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEIVNSDVSNGPKVGMFP 224
Query: 127 PKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHM 161
DL + +F Q A E ++GSQ DWLHM
Sbjct: 225 SGDLNTLPIEVQRTMFDQQEADE-SRGSQPDWLHM 258
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/141 (65%), Positives = 108/141 (76%), Gaps = 11/141 (7%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
+S+KP EPPKDYIHVRARRGQATD HSLAER RREKI ERMK+LQDLVPGCNK+ GKA++
Sbjct: 204 QSAKPPEPPKDYIHVRARRGQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVM 263
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTA 147
+DEIINY+QSLQ QVEFLSMKLEAVN + L +EGF +D+ E +F+ TA
Sbjct: 264 VDEIINYVQSLQCQVEFLSMKLEAVNPK--LACNMEGFLARDMLEPSFN---------TA 312
Query: 148 REYAQGSQQDWLHMQVGGSFE 168
+ Y Q Q +WL MQVG S E
Sbjct: 313 KAYPQFHQPEWLAMQVGTSCE 333
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/118 (79%), Positives = 100/118 (84%), Gaps = 5/118 (4%)
Query: 13 KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 72
KAE E+ G + + + EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQ
Sbjct: 110 KAEAES---LGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 166
Query: 73 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN P IE F PK++
Sbjct: 167 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEV 222
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/118 (79%), Positives = 100/118 (84%), Gaps = 5/118 (4%)
Query: 13 KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 72
KAE E+ G + + + EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQ
Sbjct: 110 KAEAES---LGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 166
Query: 73 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN P IE F PK++
Sbjct: 167 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEV 222
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/118 (79%), Positives = 100/118 (84%), Gaps = 5/118 (4%)
Query: 13 KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 72
KAE E+ G + + + EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQ
Sbjct: 104 KAEAES---LGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 160
Query: 73 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN P IE F PK++
Sbjct: 161 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEV 216
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 130 LGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVG-GSFERAT 171
G+QAF+ + FGSQ+ REY++G+ +WLHMQ+G G FER +
Sbjct: 306 FGQQAFENPEIQFGSQSTREYSRGASPEWLHMQIGSGGFERTS 348
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/150 (69%), Positives = 109/150 (72%), Gaps = 24/150 (16%)
Query: 5 GSKNENGSKAEV---EASSAAG--NKPAESSKPSE--PPK-DYIHVRARRGQATDSHSLA 56
GS ENG + EASS AG N +S+KPSE PPK DYIHVRARRGQATDSHS+A
Sbjct: 79 GSTVENGGGGGLKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQATDSHSIA 138
Query: 57 ER----------------ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
ER ARREKISERMKILQDLVPGCNK+IGKALVLDEIINYIQSLQ
Sbjct: 139 ERVIHFSLCLSISYLLLVARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQH 198
Query: 101 QVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
QVEFLSMKLEAVNSR NL PT EGF KD
Sbjct: 199 QVEFLSMKLEAVNSRANLNPTNEGFPSKDF 228
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/134 (67%), Positives = 104/134 (77%), Gaps = 10/134 (7%)
Query: 4 SGSKNENGSKAEVEASSAAGNKPAE-------SSKPSEPPKDYIHVRARRGQATDSHSLA 56
+G NENG + + E S GN A +SKP EPPKDYIHVRARRGQATDSHSLA
Sbjct: 341 AGEGNENG-QVKAEEESKGGNSNANDEKQNKSNSKPPEPPKDYIHVRARRGQATDSHSLA 399
Query: 57 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
ER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+R+
Sbjct: 400 ERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRL 459
Query: 117 NLTPTIEGFHPKDL 130
+ +IE KD+
Sbjct: 460 DF--SIESLISKDI 471
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/134 (76%), Positives = 105/134 (78%), Gaps = 10/134 (7%)
Query: 2 KTSGSKNENG-SKAEVEASSAAGNKPAESSKPSEPPKD----YIHVRARRGQATDSHSLA 56
K SG+KNE G K E EASS K AE S P YIHVRARRGQATDSHSLA
Sbjct: 109 KASGNKNEGGDGKVEGEASSG---KHAEQSSKPPPSDPPKQDYIHVRARRGQATDSHSLA 165
Query: 57 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR+
Sbjct: 166 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRL 225
Query: 117 NLTPTIEGFHPKDL 130
N IE F PKD+
Sbjct: 226 NT--GIEAFPPKDV 237
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/135 (67%), Positives = 103/135 (76%), Gaps = 8/135 (5%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
+SKP EPPKDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+L
Sbjct: 359 NSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 418
Query: 89 DEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQ----AFDATGMIF-- 142
DEIINY+QSLQRQVEFLSMKL +VN+RM+L +IE KD+ + A +IF
Sbjct: 419 DEIINYVQSLQRQVEFLSMKLASVNTRMDL--SIESLVTKDVFQSNNSLATHPNAIIFPL 476
Query: 143 GSQTAREYAQGSQQD 157
GS Y QQ+
Sbjct: 477 GSSAQAFYGHQPQQN 491
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 100/133 (75%), Gaps = 9/133 (6%)
Query: 5 GSKNENGSKAEVEASSAAGNKPAE-------SSKPSEPPKDYIHVRARRGQATDSHSLAE 57
G NENG E S N A +SKP EPPKDYIHVRARRGQATDSHSLAE
Sbjct: 342 GEGNENGQVKAEEESKGGNNSNANDEKQNKSNSKPPEPPKDYIHVRARRGQATDSHSLAE 401
Query: 58 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
R RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+R++
Sbjct: 402 RVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLD 461
Query: 118 LTPTIEGFHPKDL 130
+IE KD+
Sbjct: 462 F--SIESLISKDI 472
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/102 (81%), Positives = 92/102 (90%), Gaps = 2/102 (1%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
+SKP EPPKDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+L
Sbjct: 326 NSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 385
Query: 89 DEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
DEIINY+QSLQRQVEFLSMKL +VN+RM+L +IE KD+
Sbjct: 386 DEIINYVQSLQRQVEFLSMKLASVNTRMDL--SIENLISKDV 425
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/124 (70%), Positives = 99/124 (79%), Gaps = 5/124 (4%)
Query: 10 NGSKAEVEASS---AAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISE 66
+G+K + EA S A + +SSKP EPPKDYIHVRARRGQATDSHSLAER RREKIS+
Sbjct: 318 DGAKGKAEAKSSGDANQKQNNDSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISK 377
Query: 67 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFH 126
RMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN RM+ +E
Sbjct: 378 RMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDF--NMETLV 435
Query: 127 PKDL 130
PKD+
Sbjct: 436 PKDI 439
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 113/168 (67%), Gaps = 6/168 (3%)
Query: 2 KTSGSKNENGSKAEVEASSAAGNKPAE-SSKPSEPPKDYIHVRARRGQATDSHSLAERAR 60
K S +N KAE E +K + S+KP EPPKDYIHVRARRGQATDSHSLAER R
Sbjct: 309 KRSKGNEKNDVKAEEEHKGNGDDKQNKASTKPPEPPKDYIHVRARRGQATDSHSLAERVR 368
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 120
REKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+R+++
Sbjct: 369 REKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDI-- 426
Query: 121 TIEGFHPKDLGEQAFDATGMIF---GSQTAREYAQGSQQDWLHMQVGG 165
++ KD+ + IF S +A Q Q LH +
Sbjct: 427 NLDTLMSKDIFQTTNQLPHPIFPIDSSASAIFGHQPQQNPALHSNISN 474
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/119 (72%), Positives = 102/119 (85%), Gaps = 6/119 (5%)
Query: 7 KNENGS-KAEVEA---SSAAGNKPAE--SSKPSEPPKDYIHVRARRGQATDSHSLAERAR 60
K +NGS KAE ++ +S+ G++ SSKP EPPKDYIHVRARRGQATDSHSLAER R
Sbjct: 249 KEKNGSVKAEEDSKAGTSSGGDEKQNMSSSKPPEPPKDYIHVRARRGQATDSHSLAERVR 308
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
REKISERMK+LQDLVPGCNKV GKAL+LDEIINY++SLQRQVEFLSMKL +VN+R++ +
Sbjct: 309 REKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQVEFLSMKLSSVNTRLDFS 367
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 98/134 (73%), Gaps = 2/134 (1%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
E++KP EPPKDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++
Sbjct: 359 ENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 418
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTA 147
LDEIINY+QSLQRQVEFLSMKL AVN R+ +E K++ T + G Q+
Sbjct: 419 LDEIINYVQSLQRQVEFLSMKLAAVNPRLEF--NVESLLGKEVPHGRASPTNFVLGPQSY 476
Query: 148 REYAQGSQQDWLHM 161
+ +Q L +
Sbjct: 477 SQQLHQAQHSALQL 490
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/116 (72%), Positives = 97/116 (83%), Gaps = 2/116 (1%)
Query: 5 GSKNENGS-KAEVEASSAAGN-KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARRE 62
G +NEN KAE E + + + +S+P EPPKDYIHVRARRGQATDSHSLAER RRE
Sbjct: 319 GEENENSPVKAEEEPKGSGDDIQNKANSRPPEPPKDYIHVRARRGQATDSHSLAERVRRE 378
Query: 63 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
KISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN+R++
Sbjct: 379 KISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDF 434
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/121 (71%), Positives = 96/121 (79%), Gaps = 6/121 (4%)
Query: 5 GSKNENGSK-AEVEASSAAGNKPAE-----SSKPSEPPKDYIHVRARRGQATDSHSLAER 58
G +NENG + E E N E SKP EP KDYIHVRARRGQATDSHSLAER
Sbjct: 248 GERNENGVRNMEEEIKEGTPNAGEEKQNKSDSKPPEPQKDYIHVRARRGQATDSHSLAER 307
Query: 59 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQRQVEFLSMKL +VN++M+L
Sbjct: 308 VRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTKMDL 367
Query: 119 T 119
+
Sbjct: 368 S 368
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 100/129 (77%), Gaps = 10/129 (7%)
Query: 2 KTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARR 61
K + S +ENG K + + S+ SKP EPPKDYIHVRARRG+ATDSHSLAER RR
Sbjct: 249 KAAQSNSENGGKKQGKDST---------SKPPEPPKDYIHVRARRGEATDSHSLAERVRR 299
Query: 62 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPT 121
EKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQVEFLSMKL VN +++
Sbjct: 300 EKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN-N 358
Query: 122 IEGFHPKDL 130
+ PKD+
Sbjct: 359 LPNLLPKDI 367
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/101 (79%), Positives = 87/101 (86%), Gaps = 2/101 (1%)
Query: 30 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 89
SKP EPPKDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++LD
Sbjct: 357 SKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 416
Query: 90 EIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
EIINY+QSLQRQVEFLSMKL +VN RM + +E KD+
Sbjct: 417 EIINYVQSLQRQVEFLSMKLSSVNPRMEI--NMETLLSKDI 455
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/134 (61%), Positives = 98/134 (73%), Gaps = 2/134 (1%)
Query: 31 KPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 90
K EPPKDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC+KV GKA++LDE
Sbjct: 393 KTPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 452
Query: 91 IINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTAREY 150
IINY+QSLQRQVEFLSMKL VN R++ ++G KD+ + + M+F + +
Sbjct: 453 IINYVQSLQRQVEFLSMKLATVNPRLDF--NMDGLIAKDMLQSHGSSPRMLFSTDPTAAF 510
Query: 151 AQGSQQDWLHMQVG 164
Q Q +QVG
Sbjct: 511 PQLHQPQQGPVQVG 524
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 89/102 (87%), Gaps = 1/102 (0%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
+SKP EPPKDYIHVRARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++L
Sbjct: 239 ASKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVML 298
Query: 89 DEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
DEIINY+QSLQRQVEFLSMKL VN +++ + PKD+
Sbjct: 299 DEIINYVQSLQRQVEFLSMKLATVNPQLDFN-NLPNLLPKDM 339
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/92 (83%), Positives = 83/92 (90%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
E++KP EPPKDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++
Sbjct: 44 ENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 103
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
LDEIINY+QSLQRQVEFLSMKL AVN R+
Sbjct: 104 LDEIINYVQSLQRQVEFLSMKLAAVNPRLEFN 135
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 88/103 (85%), Gaps = 2/103 (1%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
++S P EPPKDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++
Sbjct: 13 DNSNPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 72
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
LDEIINY+QSLQRQVEFLSMK+ VN +M + +E F KD+
Sbjct: 73 LDEIINYVQSLQRQVEFLSMKMATVNPKMEI--NMETFLSKDI 113
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 84/91 (92%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
SSKP EPPKDYIHVRARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++L
Sbjct: 264 SSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVML 323
Query: 89 DEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
DEIINY+QSLQRQVEFLSMKL VN +++
Sbjct: 324 DEIINYVQSLQRQVEFLSMKLATVNPQLDFN 354
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/119 (68%), Positives = 97/119 (81%), Gaps = 8/119 (6%)
Query: 11 GSKAEVEASSAAGNKP-----AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKIS 65
GS + VE A KP +++KP EPP+DY+HVRARRGQATDSHSLAER RRE+IS
Sbjct: 158 GSDSSVEDGGAQNQKPPPPVKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRERIS 217
Query: 66 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT--PTI 122
+RMK+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQVEFLSMKL VN ++L+ PT+
Sbjct: 218 QRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNP-LDLSNLPTL 275
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/119 (68%), Positives = 97/119 (81%), Gaps = 8/119 (6%)
Query: 11 GSKAEVEASSAAGNKP-----AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKIS 65
GS + VE A KP +++KP EPP+DY+HVRARRGQATDSHSLAER RRE+IS
Sbjct: 158 GSDSSVEDGGAQNQKPPPPVKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRERIS 217
Query: 66 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT--PTI 122
+RMK+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQVEFLSMKL VN ++L+ PT+
Sbjct: 218 QRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNP-LDLSNLPTL 275
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/111 (70%), Positives = 92/111 (82%), Gaps = 2/111 (1%)
Query: 11 GSKAEVEASSAAGNKPAE--SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 68
G A+ + + G K + SSKP EPPKDYIHVRARRG+ATDSHSLAER RREKIS+RM
Sbjct: 41 GKAAQSNSENGGGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRM 100
Query: 69 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
K+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQVEFLSMKL VN +++
Sbjct: 101 KLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 151
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/102 (73%), Positives = 88/102 (86%), Gaps = 1/102 (0%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
+SKP EPPKDYIH RARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++L
Sbjct: 239 ASKPPEPPKDYIHFRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVML 298
Query: 89 DEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
DEIINY+QSLQRQVEFLSMKL VN +++ + PKD+
Sbjct: 299 DEIINYVQSLQRQVEFLSMKLATVNPQLDFN-NLPNLLPKDM 339
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/111 (70%), Positives = 92/111 (82%), Gaps = 2/111 (1%)
Query: 11 GSKAEVEASSAAGNKPAE--SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 68
G A+ + + G K + SSKP EPPKDYIHVRARRG+ATDSHSLAER RREKIS+RM
Sbjct: 246 GKAAQSNSENGGGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRM 305
Query: 69 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
K+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQVEFLSMKL VN +++
Sbjct: 306 KLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 356
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/119 (69%), Positives = 93/119 (78%), Gaps = 7/119 (5%)
Query: 5 GSKNENGSKAEVEASSAAGNKPAES-------SKPSEPPKDYIHVRARRGQATDSHSLAE 57
GSK SK +V SS G + +S +KP E PKDYIHVRARRGQATDSHSLAE
Sbjct: 147 GSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAE 206
Query: 58 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
RARREKISERM +LQDLVPGCN++ GKA++LDEIINY+QSLQRQVEFLSMKL VN RM
Sbjct: 207 RARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 265
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/119 (69%), Positives = 98/119 (82%), Gaps = 8/119 (6%)
Query: 11 GSKAEVEASSAAGN-KP----AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKIS 65
GS + VE A N KP +++KP EPP+DY+HVRARRGQATDSHSLAER RRE+IS
Sbjct: 158 GSDSSVEDGGGAQNQKPPPGKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRERIS 217
Query: 66 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT--PTI 122
+RMK+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQVEFLSMKL VN ++L+ PT+
Sbjct: 218 QRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNP-LDLSNLPTL 275
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 81/87 (93%)
Query: 27 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
+ ++KP EPPKDYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGCNKV GKAL
Sbjct: 286 SNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKAL 345
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVN 113
+LDEIINY+QSLQRQVEFLSMKL +VN
Sbjct: 346 MLDEIINYVQSLQRQVEFLSMKLSSVN 372
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 81/87 (93%)
Query: 27 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
+ ++KP EPPKDYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGCNKV GKAL
Sbjct: 286 SNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKAL 345
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVN 113
+LDEIINY+QSLQRQVEFLSMKL +VN
Sbjct: 346 MLDEIINYVQSLQRQVEFLSMKLSSVN 372
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/84 (88%), Positives = 79/84 (94%)
Query: 30 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 89
+KP EPPKDYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGCNKV GKAL+LD
Sbjct: 287 TKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLD 346
Query: 90 EIINYIQSLQRQVEFLSMKLEAVN 113
EIINY+QSLQRQVEFLSMKL +VN
Sbjct: 347 EIINYVQSLQRQVEFLSMKLSSVN 370
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/105 (74%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
Query: 12 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 71
SK VE + G+ + +KP E PKDYIHVRARRGQATDSHSLAERARREKISERM +L
Sbjct: 165 SKNGVEKCDSKGDN-KDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLL 223
Query: 72 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
QDLVPGCN++ GKA++LDEIINY+QSLQRQVEFLSMKL VN RM
Sbjct: 224 QDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 268
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 83/92 (90%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
+++K EPPKDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++
Sbjct: 332 DNTKLPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 391
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
LDEIINY+QSLQRQVEFLSMKL VN RM++
Sbjct: 392 LDEIINYVQSLQRQVEFLSMKLATVNPRMDVN 423
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 81/92 (88%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
++ KP E PKDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++
Sbjct: 358 DNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 417
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
LDEIINY+QSLQRQVEFLSMKL VN RM+
Sbjct: 418 LDEIINYVQSLQRQVEFLSMKLATVNPRMDFN 449
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 81/92 (88%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
++ KP E PKDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++
Sbjct: 358 DNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 417
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
LDEIINY+QSLQRQVEFLSMKL VN RM+
Sbjct: 418 LDEIINYVQSLQRQVEFLSMKLATVNPRMDFN 449
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 81/92 (88%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
++ KP E PKDYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++
Sbjct: 249 DNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVM 308
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
LDEIINY+QSLQRQVEFLSMKL VN RM+
Sbjct: 309 LDEIINYVQSLQRQVEFLSMKLATVNPRMDFN 340
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 85/91 (93%), Gaps = 1/91 (1%)
Query: 29 SSKPS-EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
SSKP+ EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKAL+
Sbjct: 160 SSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALM 219
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
LDEIINY+QSLQ+QVEFLSMKL VN +++
Sbjct: 220 LDEIINYVQSLQQQVEFLSMKLATVNPQLDF 250
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 97/129 (75%), Gaps = 6/129 (4%)
Query: 2 KTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARR 61
K + S +ENG + + +A PAE+ PKDYIHVRARRG+ATDSHSLAER RR
Sbjct: 246 KAAQSSSENGGGRKQQGKESATKPPAEA------PKDYIHVRARRGEATDSHSLAERVRR 299
Query: 62 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPT 121
EKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQVEFLSMKL VN +++
Sbjct: 300 EKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSL 359
Query: 122 IEGFHPKDL 130
PKD+
Sbjct: 360 PNLLLPKDI 368
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 85/91 (93%), Gaps = 1/91 (1%)
Query: 29 SSKPS-EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
SSKP+ EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKAL+
Sbjct: 160 SSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALM 219
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
LDEIINY+QSLQ+QVEFLSMKL VN +++
Sbjct: 220 LDEIINYVQSLQQQVEFLSMKLATVNPQLDF 250
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 96/125 (76%), Gaps = 6/125 (4%)
Query: 1 MKTSGSKNENGSKAEVEASSAAGN------KPAESSKPSEPPKDYIHVRARRGQATDSHS 54
M+ S EN +K + SS+ K A +SK EPPKDYIHVRARRG+ATDSHS
Sbjct: 223 MEESNGAEENCAKGKAAQSSSENGGGKKQGKDAGASKLPEPPKDYIHVRARRGEATDSHS 282
Query: 55 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 114
LAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 283 LAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 342
Query: 115 RMNLT 119
+++
Sbjct: 343 QLDFN 347
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/85 (85%), Positives = 81/85 (95%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
++KP EPPKDY+HVRARRGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL+L
Sbjct: 191 NAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALML 250
Query: 89 DEIINYIQSLQRQVEFLSMKLEAVN 113
DEIINY+QSLQRQVEFLSMKL VN
Sbjct: 251 DEIINYVQSLQRQVEFLSMKLATVN 275
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/85 (85%), Positives = 81/85 (95%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
++KP EPPKDY+HVRARRGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL+L
Sbjct: 191 NAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALML 250
Query: 89 DEIINYIQSLQRQVEFLSMKLEAVN 113
DEIINY+QSLQRQVEFLSMKL VN
Sbjct: 251 DEIINYVQSLQRQVEFLSMKLATVN 275
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 81/87 (93%)
Query: 27 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
+++KP EPPKDY+HVRARRGQATDSHSLAER RRE+IS+RMK LQDLVPGCNKVIGKAL
Sbjct: 175 GKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKAL 234
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVN 113
+LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 235 MLDEIINYVQSLQRQVEFLSMKLATVN 261
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/85 (85%), Positives = 81/85 (95%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
++KP EPPKDY+HVRARRGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL+L
Sbjct: 191 NAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALML 250
Query: 89 DEIINYIQSLQRQVEFLSMKLEAVN 113
DEIINY+QSLQRQVEFLSMKL VN
Sbjct: 251 DEIINYVQSLQRQVEFLSMKLATVN 275
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 87/103 (84%), Gaps = 1/103 (0%)
Query: 11 GSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKI 70
GS + VE K +++KP EPPKDY+HVRARRGQATDSHSLAER RRE+IS+RMK
Sbjct: 155 GSDSSVEDGEQRKGK-GKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKF 213
Query: 71 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 113
LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 214 LQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVN 256
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/109 (74%), Positives = 90/109 (82%), Gaps = 1/109 (0%)
Query: 7 KNENGSKAEVEASSAAGNKPAES-SKPSEPPKDYIHVRARRGQATDSHSLAERARREKIS 65
K ENG E ++A K ++ SKP E PKDYIHVRARRGQATDSHSLAER RREKIS
Sbjct: 218 KRENGRGFEENDENSAEEKQTKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKIS 277
Query: 66 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 114
ERMK+LQDLVPGCNKV GKAL+LDEIINY+QSLQ QVEFLSMKL +VN+
Sbjct: 278 ERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLASVNT 326
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/104 (75%), Positives = 91/104 (87%), Gaps = 3/104 (2%)
Query: 28 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
E+SKP EPPK DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC+KV GKA+
Sbjct: 1 ENSKPPEPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 60
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
+LDEIINY+QSLQRQVEFLSMKL AVN R+++ ++G K++
Sbjct: 61 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDI--NLDGLLTKEV 102
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 78/117 (66%), Positives = 93/117 (79%), Gaps = 2/117 (1%)
Query: 5 GSKNENGSKAEVEASSAAGNKPAE--SSKPSEPPKDYIHVRARRGQATDSHSLAERARRE 62
G +N KA +S G K + +SK EPPKD+IHVRARRG+ATDSHSLAER RRE
Sbjct: 225 GEENSGKGKAAQSSSENGGKKQGKDGASKLPEPPKDFIHVRARRGEATDSHSLAERVRRE 284
Query: 63 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
KIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQVEFLSMKL VN +++
Sbjct: 285 KISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 341
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 78/117 (66%), Positives = 93/117 (79%), Gaps = 2/117 (1%)
Query: 5 GSKNENGSKAEVEASSAAGNKPAE--SSKPSEPPKDYIHVRARRGQATDSHSLAERARRE 62
G +N KA +S G K + +SK EPPKD+IHVRARRG+ATDSHSLAER RRE
Sbjct: 225 GEENSGKGKAAQSSSENGGKKQGKDGASKLPEPPKDFIHVRARRGEATDSHSLAERVRRE 284
Query: 63 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
KIS+RMK+LQDLVPGCNKV+GKA++LDEIINY+QSLQRQVEFLSMKL VN +++
Sbjct: 285 KISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFN 341
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 7/120 (5%)
Query: 33 SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 92
+EPPKDYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGC+KV GKA++LDEII
Sbjct: 247 AEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEII 306
Query: 93 NYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQ 152
NY+QSLQRQVEFLSMKL VN R+ L + F P+D DA M + ++ AQ
Sbjct: 307 NYVQSLQRQVEFLSMKLSTVNPRLELG-ADDSFVPRD------DANKMCAAATSSISMAQ 359
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/86 (86%), Positives = 80/86 (93%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
+SKP E PKDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+L
Sbjct: 203 NSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 262
Query: 89 DEIINYIQSLQRQVEFLSMKLEAVNS 114
DEIINY+QSLQ QVEFLSMKL +VN+
Sbjct: 263 DEIINYVQSLQHQVEFLSMKLASVNT 288
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 4/157 (2%)
Query: 12 SKAEVEASSAAGNKPAESSKPS-EPPKDYIHVRARRGQATDSHSLAERARREKISERMKI 70
S A VE + K +++KP+ EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK
Sbjct: 127 SDASVELKAQKKGK-GKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKF 185
Query: 71 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMKL VN +++ + H KD+
Sbjct: 186 LQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLH-KDM 244
Query: 131 GEQAFDATGMIFGSQT-AREYAQGSQQDWLHMQVGGS 166
+ + +F ++ + Q D H GS
Sbjct: 245 HQPCGPSANSVFPLESDGAAFPFCDQADLFHSFGSGS 281
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 83/91 (91%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
+ +K +P KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+
Sbjct: 244 DKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 303
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
LDEIINY+QSLQRQVEFLSMKL +VN+R++
Sbjct: 304 LDEIINYVQSLQRQVEFLSMKLSSVNTRLDF 334
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/105 (73%), Positives = 87/105 (82%), Gaps = 2/105 (1%)
Query: 11 GSKAEVEASSAAGNKPAE--SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 68
GS + VE P + ++K EPPKDY+HVRARRGQATDSHSLAER RRE+IS+RM
Sbjct: 160 GSDSSVEDGGQTQKPPGKGKNAKLVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRM 219
Query: 69 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 113
K+LQDLVPGCNKVIGKAL+LDEIINY+QSLQRQVEFLSMKL VN
Sbjct: 220 KVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVN 264
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 4/157 (2%)
Query: 12 SKAEVEASSAAGNKPAESSKPS-EPPKDYIHVRARRGQATDSHSLAERARREKISERMKI 70
S A VE + K +++KP+ EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK
Sbjct: 127 SDASVELKAQKKGK-GKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKF 185
Query: 71 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMKL VN +++ + H KD+
Sbjct: 186 LQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLH-KDM 244
Query: 131 GEQAFDATGMIFGSQT-AREYAQGSQQDWLHMQVGGS 166
+ + +F ++ + Q D H GS
Sbjct: 245 YQPCGPSANSVFPLESDGAAFPFCDQADLFHSFGSGS 281
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 83/91 (91%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
+ +K +P KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+
Sbjct: 244 DKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 303
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
LDEIINY+QSLQRQVEFLSMKL +VN+R++
Sbjct: 304 LDEIINYVQSLQRQVEFLSMKLSSVNTRLDF 334
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 4/157 (2%)
Query: 12 SKAEVEASSAAGNKPAESSKPS-EPPKDYIHVRARRGQATDSHSLAERARREKISERMKI 70
S A VE + K +++KP+ EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK
Sbjct: 127 SDASVELKAQKKGK-GKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKF 185
Query: 71 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMKL VN +++ + H KD+
Sbjct: 186 LQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLH-KDM 244
Query: 131 GEQAFDATGMIFGSQT-AREYAQGSQQDWLHMQVGGS 166
+ + +F ++ + Q D H GS
Sbjct: 245 YQPCGPSANSVFPLESDGAAFPFCDQADLFHSFGSGS 281
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 83/91 (91%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
+ +K +P KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+
Sbjct: 238 DKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 297
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
LDEIINY+QSLQRQVEFLSMKL +VN+R++
Sbjct: 298 LDEIINYVQSLQRQVEFLSMKLSSVNTRLDF 328
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 92/109 (84%), Gaps = 2/109 (1%)
Query: 12 SKAEVEASSAAGNKPAESSKPS-EPPKDYIHVRARRGQATDSHSLAERARREKISERMKI 70
S A VE + K +++KP+ EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK
Sbjct: 127 SDASVELKAQKKGK-GKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKF 185
Query: 71 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMKL VN +++ +
Sbjct: 186 LQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFS 234
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 83/91 (91%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
+ +K +P KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+
Sbjct: 244 DKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 303
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
LDEIINY+QSLQRQVEFLSMKL +VN+R++
Sbjct: 304 LDEIINYVQSLQRQVEFLSMKLSSVNTRLDF 334
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/100 (74%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK LQDLVPGCNKV+GKAL+LDEIIN
Sbjct: 148 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 207
Query: 94 YIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQ 133
Y+QSLQ+QVEFLSMKL VN ++ + H KD+ +Q
Sbjct: 208 YVQSLQQQVEFLSMKLATVNPELDFSNLSTLLH-KDMYQQ 246
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/122 (66%), Positives = 95/122 (77%), Gaps = 3/122 (2%)
Query: 18 ASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 76
A+ A G S+ S+PPK+ YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVP
Sbjct: 333 ANKACGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVP 392
Query: 77 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFD 136
GC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IEG KD+ +Q D
Sbjct: 393 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF--NIEGLLAKDILQQRPD 450
Query: 137 AT 138
+
Sbjct: 451 PS 452
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/113 (69%), Positives = 91/113 (80%), Gaps = 2/113 (1%)
Query: 18 ASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 77
A++ G + +K S +DYIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPG
Sbjct: 217 ATTTTGKSKGKGAKESSEKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPG 276
Query: 78 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
C+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++L IEG KDL
Sbjct: 277 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL--NIEGLLSKDL 327
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/100 (74%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK LQDLVPGCNKV+GKAL+LDEIIN
Sbjct: 148 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 207
Query: 94 YIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQ 133
Y+QSLQ+QVEFLSMKL VN ++ + H KD+ +Q
Sbjct: 208 YVQSLQQQVEFLSMKLATVNPELDFSNLSTLLH-KDMYQQ 246
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 75/97 (77%), Positives = 84/97 (86%), Gaps = 2/97 (2%)
Query: 33 SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 92
+EP KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEII
Sbjct: 230 AEPSKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEII 289
Query: 93 NYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 129
NY+QSLQRQVEFLSMKL VN R+ L ++ PKD
Sbjct: 290 NYVQSLQRQVEFLSMKLSTVNPRLKL--DVDSCIPKD 324
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 99/129 (76%), Gaps = 6/129 (4%)
Query: 9 ENGSKAEVEASS---AAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKI 64
EN K + + +S A+G S+ S+PPK+ YIHVRARRGQAT+SHSLAER RREKI
Sbjct: 184 ENQQKGDHQPTSTAKASGKNAKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKI 243
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG 124
SERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IEG
Sbjct: 244 SERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF--NIEG 301
Query: 125 FHPKDLGEQ 133
KD+ +Q
Sbjct: 302 LLAKDILQQ 310
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/98 (77%), Positives = 84/98 (85%), Gaps = 3/98 (3%)
Query: 33 SEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 91
S+PPKD YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEI
Sbjct: 293 SDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 352
Query: 92 INYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 129
INY+QSLQRQVEFLSMKL VN +M+ +EG KD
Sbjct: 353 INYVQSLQRQVEFLSMKLATVNPQMDF--NLEGLLAKD 388
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/98 (77%), Positives = 84/98 (85%), Gaps = 3/98 (3%)
Query: 33 SEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 91
S+PPKD YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEI
Sbjct: 292 SDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 351
Query: 92 INYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 129
INY+QSLQRQVEFLSMKL VN +M+ +EG KD
Sbjct: 352 INYVQSLQRQVEFLSMKLATVNPQMDF--NLEGLLAKD 387
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 93/126 (73%), Gaps = 4/126 (3%)
Query: 7 KNENGSKAEVEASSAAGNKPAESSK--PSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
K E S A A + G + K P +DYIH+RARRGQAT+SHSLAER RREKI
Sbjct: 219 KGEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKI 278
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG 124
SERMK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++L IEG
Sbjct: 279 SERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL--NIEG 336
Query: 125 FHPKDL 130
KDL
Sbjct: 337 LLSKDL 342
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/98 (77%), Positives = 84/98 (85%), Gaps = 3/98 (3%)
Query: 33 SEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 91
S+PPKD YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEI
Sbjct: 293 SDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 352
Query: 92 INYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 129
INY+QSLQRQVEFLSMKL VN +M+ +EG KD
Sbjct: 353 INYVQSLQRQVEFLSMKLATVNPQMDF--NLEGLLAKD 388
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 99/128 (77%), Gaps = 3/128 (2%)
Query: 22 AGNKPAESSKPS--EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 79
A K ++S +P+ EPP+DY+HVRARRGQATDSHSLAER RREKI+ +MK+LQDLVPGCN
Sbjct: 46 AKGKVSKSKQPAADEPPRDYVHVRARRGQATDSHSLAERVRREKITLKMKMLQDLVPGCN 105
Query: 80 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATG 139
KVIGKAL+LDEIINY+QSLQ+QVEFLSMKL VN +++ T+ KD+ + +
Sbjct: 106 KVIGKALMLDEIINYVQSLQQQVEFLSMKLSTVNPQLDFD-TLSNLLHKDMNQALGPSAS 164
Query: 140 MIFGSQTA 147
+F ++A
Sbjct: 165 TVFPLESA 172
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 91/110 (82%), Gaps = 3/110 (2%)
Query: 22 AGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 80
+G + + S+ S+PPK+ YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+K
Sbjct: 350 SGKQGKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 409
Query: 81 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
V GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IEG KD+
Sbjct: 410 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF--NIEGLLAKDI 457
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 101/140 (72%), Gaps = 4/140 (2%)
Query: 13 KAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKIL 71
K S A+G + + S+ S+ PK+ YIHVRARRGQAT+SHSLAER RREKISERMK L
Sbjct: 339 KPTSTTSKASGKQGKQGSQGSDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFL 398
Query: 72 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD-L 130
QDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IEG KD L
Sbjct: 399 QDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF--NIEGLLAKDIL 456
Query: 131 GEQAFDATGMIFGSQTAREY 150
+A + + F S+ Y
Sbjct: 457 QSRAVPPSSLAFSSEMPMAY 476
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 94/114 (82%), Gaps = 3/114 (2%)
Query: 18 ASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 76
A+ G ++S+PS+PPK+ YIHVRARRGQAT+SHSLAER RREKISERMK LQ+LVP
Sbjct: 344 ANKGTGKHGKQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVP 403
Query: 77 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
GC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R+++ I+G KD+
Sbjct: 404 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDI--NIDGVVAKDI 455
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 94/114 (82%), Gaps = 3/114 (2%)
Query: 18 ASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 76
A+ G ++S+PS+PPK+ YIHVRARRGQAT+SHSLAER RREKISERMK LQ+LVP
Sbjct: 300 ANKGTGKHGKQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVP 359
Query: 77 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
GC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R+++ I+G KD+
Sbjct: 360 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDI--NIDGVVAKDI 411
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 93/126 (73%), Gaps = 4/126 (3%)
Query: 7 KNENGSKAEVEASSAAGNKPAESSK--PSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
K E S A A + G + K P +DYIH+RARRGQAT+SHSLAER RREKI
Sbjct: 209 KGEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKI 268
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG 124
SERMK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++L IEG
Sbjct: 269 SERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL--NIEG 326
Query: 125 FHPKDL 130
KDL
Sbjct: 327 LLSKDL 332
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 79/86 (91%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK LQDLVPGCNKV+GKAL+LDEIIN
Sbjct: 148 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 207
Query: 94 YIQSLQRQVEFLSMKLEAVNSRMNLT 119
Y+QSLQ+QVEFLSMKL VN ++ +
Sbjct: 208 YVQSLQQQVEFLSMKLATVNPELDFS 233
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 79/86 (91%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
EPPKDY+HVRARRGQATDSHSLAER RREKIS+RMK LQDLVPGCNKV+GKAL+LDEIIN
Sbjct: 150 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 209
Query: 94 YIQSLQRQVEFLSMKLEAVNSRMNLT 119
Y+QSLQ+QVEFLSMKL VN ++ +
Sbjct: 210 YVQSLQQQVEFLSMKLATVNPELDFS 235
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 83/99 (83%), Gaps = 2/99 (2%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+P KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVP CNKV GKA++LDEIIN
Sbjct: 24 DPHKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIIN 83
Query: 94 YIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGE 132
Y+QSLQRQVEFLSMKL VN +M ++ F PKD E
Sbjct: 84 YVQSLQRQVEFLSMKLSTVNPQMEF--DVDNFLPKDDNE 120
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/102 (77%), Positives = 87/102 (85%), Gaps = 3/102 (2%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
+SK SE P DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA +L
Sbjct: 173 NSKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGML 231
Query: 89 DEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
DEIINY+QSLQRQVEFLSMKL AVN R++L +I+ KD+
Sbjct: 232 DEIINYVQSLQRQVEFLSMKLAAVNPRLDL--SIDDLFDKDV 271
>gi|388509910|gb|AFK43021.1| unknown [Medicago truncatula]
Length = 102
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/104 (75%), Positives = 83/104 (79%), Gaps = 2/104 (1%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 127
MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR+N IE P
Sbjct: 1 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNT--GIEASPP 58
Query: 128 KDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 171
KD G+Q FD GM F SQ RE ++G +WLHMQVGG FER T
Sbjct: 59 KDYGQQTFDLAGMPFVSQATREPSRGFSPEWLHMQVGGGFERTT 102
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 94/125 (75%), Gaps = 2/125 (1%)
Query: 6 SKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKIS 65
SK++ + ++ G + +K +DYIHVRARRGQAT+SHSLAER RREKIS
Sbjct: 205 SKDKGEESSPATGTTTGGRSKGKGAKEGSEKEDYIHVRARRGQATNSHSLAERLRREKIS 264
Query: 66 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
ERMK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++L IEG
Sbjct: 265 ERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL--NIEGL 322
Query: 126 HPKDL 130
KDL
Sbjct: 323 LSKDL 327
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/146 (57%), Positives = 104/146 (71%), Gaps = 5/146 (3%)
Query: 8 NENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISER 67
++N S + + G + A++S P P ++YIHVRARRGQAT+SHSLAER RREKISER
Sbjct: 270 DQNPSSVPSKNTGKHGKQGAQASDP--PKEEYIHVRARRGQATNSHSLAERVRREKISER 327
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 127
MK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IEG
Sbjct: 328 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF--NIEGMLG 385
Query: 128 KD-LGEQAFDATGMIFGSQTAREYAQ 152
KD L + ++ M F +T Y Q
Sbjct: 386 KDILQSRVGPSSTMGFSPETTMPYPQ 411
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 95/130 (73%), Gaps = 12/130 (9%)
Query: 33 SEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 91
S+PPK+ YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEI
Sbjct: 397 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 456
Query: 92 INYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFD---------ATGMIF 142
INY+QSLQRQVEFLSMKL VN R++ IEG KD+ E A ++ M F
Sbjct: 457 INYVQSLQRQVEFLSMKLATVNPRLDF--NIEGMLGKDVSEIAXQKILQSRVGPSSTMGF 514
Query: 143 GSQTAREYAQ 152
+T Y Q
Sbjct: 515 SPETTMPYPQ 524
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/99 (72%), Positives = 86/99 (86%), Gaps = 1/99 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
EPP+DY+HVRARRGQATDSHSLAER RREKI+ +MK+LQDLVPGCNKVIGKAL+LDEIIN
Sbjct: 169 EPPRDYVHVRARRGQATDSHSLAERVRREKITIKMKMLQDLVPGCNKVIGKALMLDEIIN 228
Query: 94 YIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGE 132
Y+QSLQ+QVEFLSMKL VN +++ + T+ KD+ E
Sbjct: 229 YVQSLQQQVEFLSMKLATVNPQLDFS-TLSTLLHKDMNE 266
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/94 (78%), Positives = 83/94 (88%), Gaps = 2/94 (2%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DYIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 251 EDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 310
Query: 97 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
SLQRQVEFLSMKL VN R++L IEG KDL
Sbjct: 311 SLQRQVEFLSMKLATVNPRLDL--NIEGLLSKDL 342
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/94 (78%), Positives = 83/94 (88%), Gaps = 2/94 (2%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DYIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 248 EDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 307
Query: 97 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
SLQRQVEFLSMKL VN R++L IEG KDL
Sbjct: 308 SLQRQVEFLSMKLATVNPRLDL--NIEGLLSKDL 339
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/119 (65%), Positives = 92/119 (77%), Gaps = 7/119 (5%)
Query: 13 KAEVEASSAAGNK--PAESSKPSEPPKD-----YIHVRARRGQATDSHSLAERARREKIS 65
KAE AS +G+ P S+PP+D YIHVRARRGQATDSHSLAER RREKIS
Sbjct: 33 KAERSASENSGDSASPRSLKATSKPPQDLSKQDYIHVRARRGQATDSHSLAERVRREKIS 92
Query: 66 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG 124
ERMK LQDLVPGC+K+ GKA++LDEIINY+QSLQRQ+EFLSMKL AVN R++ + + G
Sbjct: 93 ERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQIEFLSMKLAAVNPRLDYSYDLLG 151
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/143 (59%), Positives = 101/143 (70%), Gaps = 11/143 (7%)
Query: 7 KNENGSKAEVEASSAAGNKPAESSK------PSEPPKDYIHVRARRGQATDSHSLAERAR 60
KNEN K E + SS A P +SS+ P ++YIHVRARRGQAT+SHSLAER R
Sbjct: 215 KNENDEKYEPKRSSVA---PGKSSRKQAKDNAGSPKEEYIHVRARRGQATNSHSLAERVR 271
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 120
REKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL +VN ++L
Sbjct: 272 REKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDL-- 329
Query: 121 TIEGFHPKDLGEQAFDATGMIFG 143
IE KD+ + + FG
Sbjct: 330 NIESILSKDIFQSRGTTASLAFG 352
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 113/173 (65%), Gaps = 24/173 (13%)
Query: 5 GSKNENGS-KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREK 63
GS +EN + A+VE E KP EP KDYIHVRARRGQATDSHSLAER RR++
Sbjct: 219 GSSDENAAVPAKVEL---------EEEKP-EPVKDYIHVRARRGQATDSHSLAERVRRKR 268
Query: 64 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIE 123
ISERMK+LQ LVPGCNK+ GKAL+LDEIINY+QSLQRQVEFLSMKL +N +++L +
Sbjct: 269 ISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLSTMNPQLDL----D 324
Query: 124 G-FHP-KDLGEQAFDAT-------GMIFGSQTAREYAQGSQQDWLHMQVGGSF 167
G + P KD+ + A + S A +A GS +++ G+F
Sbjct: 325 GQYKPSKDMNQVTMPAYASDEPAGAFSYASSPADSFAMGSAVAHHGLELQGTF 377
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
Query: 7 KNENGSKAEVEASSAAGNKPAESSK--PSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
K E S A A + G + K P +DYIH+RARRGQAT+SHSLAER RREKI
Sbjct: 220 KGEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKI 279
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG 124
SERMK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++ IEG
Sbjct: 280 SERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD---NIEG 336
Query: 125 FHPKDL 130
KDL
Sbjct: 337 LLSKDL 342
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 154 bits (390), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 91/123 (73%), Gaps = 8/123 (6%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+P ++YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIIN
Sbjct: 142 QPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 201
Query: 94 YIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG------FHPKDLGEQAFDATGMIFGSQTA 147
Y+QSLQRQVEFLSMKL VN R++L IEG F PK L A + + F +
Sbjct: 202 YVQSLQRQVEFLSMKLATVNPRLDL--NIEGLLAKDVFDPKILQLHAVPPSSLAFSLEMP 259
Query: 148 REY 150
Y
Sbjct: 260 MAY 262
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 94/125 (75%), Gaps = 10/125 (8%)
Query: 13 KAEVEASSAAGN-------KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKIS 65
KAE AS +G+ K + S + P +DYIHVRARRGQATDSHSLAER RREKIS
Sbjct: 37 KAERSASENSGDSVGPSSLKASSKSVQNLPKQDYIHVRARRGQATDSHSLAERVRREKIS 96
Query: 66 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
ERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQ+EFLSMKL AVN R++ + G
Sbjct: 97 ERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFLSMKLAAVNPRLDYGFDVLG- 155
Query: 126 HPKDL 130
KDL
Sbjct: 156 --KDL 158
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/117 (69%), Positives = 91/117 (77%), Gaps = 7/117 (5%)
Query: 27 AESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
A++SK SE K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 129 ADTSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 188
Query: 86 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIF 142
+LDEIINY+QSLQRQVEFLSMKL AVN R++ I+ F L ++ F A F
Sbjct: 189 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF--NIDNF----LAKEVFPACAANF 239
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 105/160 (65%), Gaps = 5/160 (3%)
Query: 7 KNENGSKAEVEASSAAGNKPA---ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREK 63
KNEN K E + SS A K + P ++YIHVRARRGQAT+SHSLAER RREK
Sbjct: 211 KNENDEKDEPKRSSVASGKSSGKQAKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREK 270
Query: 64 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIE 123
ISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL +VN ++ I+
Sbjct: 271 ISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDF--NID 328
Query: 124 GFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQV 163
KD+ + +FG Y Q Q ++ +++
Sbjct: 329 RILSKDIFQSQGAIASSVFGFLPGIVYPQLHQPKYMQVKM 368
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/109 (67%), Positives = 88/109 (80%), Gaps = 1/109 (0%)
Query: 11 GSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMK 69
G S AG + + S+PS+ PK+ YIHVRARRGQAT+SHSLAER RREKISERM+
Sbjct: 309 GQNPSSTTSKPAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMR 368
Query: 70 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
+LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++
Sbjct: 369 LLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDF 417
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/133 (58%), Positives = 94/133 (70%), Gaps = 16/133 (12%)
Query: 11 GSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMK 69
G S AG + + S+PS+ PK+ YIHVRARRGQAT+SHSLAER RREKISERM+
Sbjct: 309 GQNPSSTTSKPAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMR 368
Query: 70 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT---------- 119
+LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++
Sbjct: 369 LLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLTKEFI 428
Query: 120 -----PTIEGFHP 127
P++ GF P
Sbjct: 429 QSKAGPSLFGFPP 441
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/105 (74%), Positives = 88/105 (83%), Gaps = 3/105 (2%)
Query: 27 AESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
A++SK SE K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 240 ADTSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKA 299
Query: 86 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
+LDEIINY+QSLQRQVEFLSMKL AVN R++ I+ F K++
Sbjct: 300 GMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF--NIDNFLAKEV 342
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 85/110 (77%), Gaps = 16/110 (14%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK------------- 80
EPPKDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNK
Sbjct: 137 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFT 196
Query: 81 -VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 129
V GKA++LDEIINY+QSLQRQVEFLSMKL VN +++ ++ F PKD
Sbjct: 197 LVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDF--DVDNFIPKD 244
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/92 (82%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Query: 28 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
E+SK SE K DYIHVRARRGQATDSHSLAERARREKISERMK LQDLVPGCNK+ GKA
Sbjct: 234 ENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAG 293
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
+LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 294 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 325
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 77/85 (90%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
EP KDYIHVRARRGQATDSHSLAER RRE+ISERMK+LQ LVPGCNK+ GKAL+LDEIIN
Sbjct: 73 EPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIIN 132
Query: 94 YIQSLQRQVEFLSMKLEAVNSRMNL 118
Y+QSLQRQVEFLSMKL +N +++
Sbjct: 133 YVQSLQRQVEFLSMKLATMNPQLDF 157
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/94 (77%), Positives = 83/94 (88%), Gaps = 2/94 (2%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
++YIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 243 EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 302
Query: 97 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
SLQRQVEFLSMKL VN R++L IEG KDL
Sbjct: 303 SLQRQVEFLSMKLATVNPRLDL--NIEGLLSKDL 334
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/94 (77%), Positives = 83/94 (88%), Gaps = 2/94 (2%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
++YIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 243 EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 302
Query: 97 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
SLQRQVEFLSMKL VN R++L IEG KDL
Sbjct: 303 SLQRQVEFLSMKLATVNPRLDL--NIEGLLSKDL 334
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 77/85 (90%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
EP KDYIHVRARRGQATDSHSLAER RRE+ISERMK+LQ LVPGCNK+ GKAL+LDEIIN
Sbjct: 103 EPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIIN 162
Query: 94 YIQSLQRQVEFLSMKLEAVNSRMNL 118
Y+QSLQRQVEFLSMKL +N +++
Sbjct: 163 YVQSLQRQVEFLSMKLATMNPQLDF 187
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/92 (82%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Query: 28 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
E+SK SE K DYIHVRARRGQATDSHSLAERARREKISERMK LQDLVPGCNK+ GKA
Sbjct: 234 ENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAG 293
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
+LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 294 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 325
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 94/130 (72%), Gaps = 5/130 (3%)
Query: 4 SGSKNENGSKAEVEASSAAGNKPAES---SKPSEPPKDYIHVRARRGQATDSHSLAERAR 60
S KNE+ K E E SS A K + P +DYIHVRARRGQAT+SHSLAER R
Sbjct: 219 SAQKNEDDEKGEPERSSVASGKSSGKQIKDNAGSPKEDYIHVRARRGQATNSHSLAERVR 278
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 120
REKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL +VN ++
Sbjct: 279 REKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDF-- 336
Query: 121 TIEGFHPKDL 130
IE KD+
Sbjct: 337 NIERILSKDI 346
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/111 (71%), Positives = 87/111 (78%), Gaps = 4/111 (3%)
Query: 7 KNENGSKAEVEASSAAGN---KPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARRE 62
K E GS +E S + K A S P + PK DYIHVRARRGQATDSHSLAER RRE
Sbjct: 37 KTEQGSASENSGDSISPRSTLKGATSKPPQDLPKQDYIHVRARRGQATDSHSLAERVRRE 96
Query: 63 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 113
KISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQ+EFLSMKL AVN
Sbjct: 97 KISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFLSMKLAAVN 147
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/98 (76%), Positives = 83/98 (84%), Gaps = 3/98 (3%)
Query: 33 SEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 91
S+ PKD YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEI
Sbjct: 293 SDLPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 352
Query: 92 INYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 129
INY+QSLQRQVEFLSMKL VN +M+ +EG KD
Sbjct: 353 INYVQSLQRQVEFLSMKLATVNPQMDF--NLEGLLAKD 388
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 93/130 (71%), Gaps = 5/130 (3%)
Query: 4 SGSKNENGSKAEVEASSAAGNKPA---ESSKPSEPPKDYIHVRARRGQATDSHSLAERAR 60
S KNEN E + SS A K + P +DYIHVRARRGQAT+SHSLAER R
Sbjct: 217 SAKKNENDDNGEPKRSSVASRKSSGKQTKDNAGSPKEDYIHVRARRGQATNSHSLAERVR 276
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 120
REKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL +VN ++
Sbjct: 277 REKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDF-- 334
Query: 121 TIEGFHPKDL 130
IE KD+
Sbjct: 335 NIERILSKDI 344
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/92 (80%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
++SK SE P DYIHVRARRGQATDSHSLAER RREKISERM LQDLVPGCNKV GKA +
Sbjct: 181 QNSKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGM 239
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
LDEIINY+QSLQRQVEFLSMKL AVN R++ +
Sbjct: 240 LDEIINYVQSLQRQVEFLSMKLAAVNPRLDFS 271
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/94 (77%), Positives = 83/94 (88%), Gaps = 2/94 (2%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
++YIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 624 EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 683
Query: 97 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
SLQRQVEFLSMKL VN R++L IEG KDL
Sbjct: 684 SLQRQVEFLSMKLATVNPRLDL--NIEGLLSKDL 715
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 92/121 (76%), Gaps = 3/121 (2%)
Query: 11 GSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMK 69
G + + A+G + S+ S+PP + Y+HVRARRGQAT+SHSLAER RREKISERMK
Sbjct: 273 GKQQTSSTAKASGKNAKQGSQASDPPNEGYVHVRARRGQATNSHSLAERVRREKISERMK 332
Query: 70 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 129
LQDLVPGCNKV GKA++LDEIINY+QSLQ+QVEFLSMKL VN ++ +E PKD
Sbjct: 333 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPHVDF--NMERLLPKD 390
Query: 130 L 130
+
Sbjct: 391 I 391
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 94/131 (71%), Gaps = 8/131 (6%)
Query: 28 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
E+SK S+ K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 176 ENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 235
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL-----GEQAFDATGMI 141
+LDEIINY+QSLQ+QVEFLSMKL VN R++ I+ K++ +F A GM
Sbjct: 236 MLDEIINYVQSLQKQVEFLSMKLATVNPRLDF--NIDDLFEKEVFPNCDANASFQAMGMS 293
Query: 142 FGSQTAREYAQ 152
G + Y Q
Sbjct: 294 TGLNSNNPYLQ 304
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 94/131 (71%), Gaps = 8/131 (6%)
Query: 28 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
E+SK S+ K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA
Sbjct: 176 ENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAG 235
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL-----GEQAFDATGMI 141
+LDEIINY+QSLQ+QVEFLSMKL VN R++ I+ K++ +F A GM
Sbjct: 236 MLDEIINYVQSLQKQVEFLSMKLATVNPRLDF--NIDDLFEKEVFPNCDANASFQAMGMS 293
Query: 142 FGSQTAREYAQ 152
G + Y Q
Sbjct: 294 TGLNSNNPYLQ 304
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/106 (70%), Positives = 85/106 (80%), Gaps = 2/106 (1%)
Query: 8 NENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISER 67
N N +K E + +S + + +K EPPKDYIHVRARRGQATDSHSLAER RREKISER
Sbjct: 151 NVNDAKKEEKENSPKADSEKKVAK--EPPKDYIHVRARRGQATDSHSLAERVRREKISER 208
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 113
MKILQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/117 (65%), Positives = 92/117 (78%), Gaps = 5/117 (4%)
Query: 17 EASSAAGNKPAESSKPSEP---PKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 73
++S+ A KP+ ++ + +DYIHVRARRGQAT+SHSLAER RREKISERMK LQD
Sbjct: 48 DSSTMANAKPSGTNAKNSTDGAKEDYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 107
Query: 74 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
LVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL AVN ++ IEG KDL
Sbjct: 108 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPTLDF--NIEGLLSKDL 162
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 94/130 (72%), Gaps = 5/130 (3%)
Query: 4 SGSKNENGSKAEVEASSAAGNKPAES---SKPSEPPKDYIHVRARRGQATDSHSLAERAR 60
S KNE+ K E + SS A K + P +DYIHVRARRGQAT+SHSLAER R
Sbjct: 219 SAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGSPKEDYIHVRARRGQATNSHSLAERVR 278
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 120
REKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL +VN ++
Sbjct: 279 REKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDF-- 336
Query: 121 TIEGFHPKDL 130
IE KD+
Sbjct: 337 NIERILSKDI 346
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 76/86 (88%)
Query: 33 SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 92
SEP KDYIHVRARRGQATDSHSLAER RREKI ERMK+LQ LVP CNK+ GKAL+LDEII
Sbjct: 249 SEPVKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEII 308
Query: 93 NYIQSLQRQVEFLSMKLEAVNSRMNL 118
NY+QSLQRQVEFLSMKL +N ++ L
Sbjct: 309 NYVQSLQRQVEFLSMKLSTMNPQLEL 334
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 94/130 (72%), Gaps = 5/130 (3%)
Query: 4 SGSKNENGSKAEVEASSAAGNKPAES---SKPSEPPKDYIHVRARRGQATDSHSLAERAR 60
S KNE+ K E + SS A K + P +DYIHVRARRGQAT+SHSLAER R
Sbjct: 276 SAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGSPKEDYIHVRARRGQATNSHSLAERVR 335
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 120
REKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL +VN ++
Sbjct: 336 REKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDF-- 393
Query: 121 TIEGFHPKDL 130
IE KD+
Sbjct: 394 NIERILSKDI 403
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 94/130 (72%), Gaps = 5/130 (3%)
Query: 4 SGSKNENGSKAEVEASSAAGNKPAES---SKPSEPPKDYIHVRARRGQATDSHSLAERAR 60
S KNE+ K E + SS A K + P +DYIHVRARRGQAT+SHSLAER R
Sbjct: 327 SAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGSPKEDYIHVRARRGQATNSHSLAERVR 386
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 120
REKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL +VN ++
Sbjct: 387 REKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDF-- 444
Query: 121 TIEGFHPKDL 130
IE KD+
Sbjct: 445 NIERILSKDI 454
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 91/125 (72%), Gaps = 12/125 (9%)
Query: 1 MKTSGSKNENGSKAEVEASSAAGN-----------KPAESSKPSEPPK-DYIHVRARRGQ 48
+K S E+ + E +SA+ N K A S +P + PK DYIHVRARRGQ
Sbjct: 11 LKRHKSDGEDVRAVKAEQASASENSGDSISPRSTLKGATSKRPQDFPKQDYIHVRARRGQ 70
Query: 49 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
ATDSHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMK
Sbjct: 71 ATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMK 130
Query: 109 LEAVN 113
L VN
Sbjct: 131 LATVN 135
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/119 (65%), Positives = 93/119 (78%), Gaps = 8/119 (6%)
Query: 2 KTSGSKNEN--GSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERA 59
K++ +KN N + AE ++ G++ ++ KP +YIHVRARRGQATDSHSLAER
Sbjct: 175 KSNANKNNNRETTSAETSKDNSKGSE-VQNQKP-----EYIHVRARRGQATDSHSLAERV 228
Query: 60 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
RREKISERMK LQDLVPGCNKV GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 229 RREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 287
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 105/151 (69%), Gaps = 5/151 (3%)
Query: 17 EASSAAGNKPAESSKPSEPP--KDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 74
E + + + +++KPS +DYIHVRARRGQATDSHSLAER RREKISERMK+LQDL
Sbjct: 95 ETAESCPKQTVDNAKPSSVSVKQDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 154
Query: 75 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIE-GFHPKDLGEQ 133
VPGCNKV GKA++LDEIINY+Q+LQ QVEFLSMKL AVN +++ +E G+ +D+ +
Sbjct: 155 VPGCNKVTGKAVMLDEIINYVQALQCQVEFLSMKLAAVNPQLDC--NVEGGYLTRDVLQP 212
Query: 134 AFDATGMIFGSQTAREYAQGSQQDWLHMQVG 164
+ +F T +Q +Q +Q G
Sbjct: 213 HCSSISKMFAPDTTAAASQINQLQKTPLQHG 243
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 94/135 (69%), Gaps = 13/135 (9%)
Query: 1 MKTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERAR 60
+K + ++ GSK + S +KP DYIHVRARRGQATDSHSLAER R
Sbjct: 113 LKNRENCDDVGSKENSKGSEIQNHKP-----------DYIHVRARRGQATDSHSLAERVR 161
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 120
REKISERMK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 162 REKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF-- 219
Query: 121 TIEGFHPKDLGEQAF 135
I+ K++ Q F
Sbjct: 220 NIDELFAKEVFTQNF 234
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/82 (84%), Positives = 74/82 (90%)
Query: 32 PSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 91
P EPP YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEI
Sbjct: 154 PEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEI 213
Query: 92 INYIQSLQRQVEFLSMKLEAVN 113
INY+QSLQ QVEFLSMKL +VN
Sbjct: 214 INYVQSLQNQVEFLSMKLASVN 235
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/143 (57%), Positives = 97/143 (67%), Gaps = 5/143 (3%)
Query: 4 SGSKNENGSKAEVEASSAAGNKPA---ESSKPSEPPKDYIHVRARRGQATDSHSLAERAR 60
S KNEN K + + SS A K + P ++YIHVRARRGQAT+SHSLAER R
Sbjct: 218 SAQKNENDEKGKPKRSSVASGKSSGKQTKDNAGSPKEEYIHVRARRGQATNSHSLAERVR 277
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 120
REKISERMK LQ+LVPGC KV GKA++LDEIINY+QSLQRQVEFLSMKL +VN ++
Sbjct: 278 REKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTLDF-- 335
Query: 121 TIEGFHPKDLGEQAFDATGMIFG 143
IE KD+ + A FG
Sbjct: 336 NIERILSKDIFQSRGSAASSAFG 358
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/98 (77%), Positives = 84/98 (85%), Gaps = 2/98 (2%)
Query: 22 AGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 80
AGN ++SK +E K DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK
Sbjct: 217 AGNS-KDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNK 275
Query: 81 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 276 ITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 313
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/82 (84%), Positives = 74/82 (90%)
Query: 32 PSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 91
P EPP YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEI
Sbjct: 137 PEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEI 196
Query: 92 INYIQSLQRQVEFLSMKLEAVN 113
INY+QSLQ QVEFLSMKL +VN
Sbjct: 197 INYVQSLQNQVEFLSMKLASVN 218
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/100 (74%), Positives = 81/100 (81%), Gaps = 5/100 (5%)
Query: 19 SSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 78
+S +K E KP DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC
Sbjct: 216 TSKDNSKVTEVQKP-----DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 270
Query: 79 NKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
NK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 271 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 310
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 93/129 (72%), Gaps = 5/129 (3%)
Query: 2 KTSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARR 61
K G K+E K + S + K E K P +DYIH+RAR GQAT+SHSLAER RR
Sbjct: 228 KDDGDKDE--PKRPIVTSRKSNGKQTED-KSDAPKEDYIHIRARSGQATNSHSLAERVRR 284
Query: 62 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPT 121
EKISERMK LQDLVPGC+KVIGKA++LDEIINY+QSLQRQVEFLSMKL AVN ++
Sbjct: 285 EKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSAVNPALDF--N 342
Query: 122 IEGFHPKDL 130
IE KDL
Sbjct: 343 IERILSKDL 351
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/113 (69%), Positives = 87/113 (76%), Gaps = 5/113 (4%)
Query: 2 KTSGSK--NENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERA 59
KT G K N N SK VE + K SK EPP DYIHVRARRGQATDSHSLAER
Sbjct: 97 KTRGRKARNSNNSKEGVEGRKSKKQK--RGSK-EEPPTDYIHVRARRGQATDSHSLAERV 153
Query: 60 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 112
RREKISERM+ LQ+LVPGC+KV GKAL+LDEIINY+Q+LQ QVEFLSMKL ++
Sbjct: 154 RREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSI 206
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/105 (69%), Positives = 82/105 (78%), Gaps = 9/105 (8%)
Query: 14 AEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 73
AEV+ SS G P E DYIHVRA+RGQAT+SHSLAER RRE+ISERMK LQD
Sbjct: 227 AEVKMSSQTGEAPKE---------DYIHVRAKRGQATNSHSLAERVRRERISERMKFLQD 277
Query: 74 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
LVPGCNK+ GKA++LDEIINY+QSLQRQVEFLSMKL V MN+
Sbjct: 278 LVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVYPEMNV 322
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/104 (71%), Positives = 85/104 (81%), Gaps = 6/104 (5%)
Query: 15 EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 74
E A ++ G++ ++ KP DYIHVRARRGQATDSHSLAER RREKISERMK LQDL
Sbjct: 171 ETSADTSKGSE-VQNQKP-----DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 224
Query: 75 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
+PGCNKV GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 225 IPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 268
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 9 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 68
++G K + AS + K E + P +DYIH+RAR GQAT+SHSLAER RREKISERM
Sbjct: 231 KDGPKRPISASRKSNGKQTEDNS-DAPKEDYIHIRARSGQATNSHSLAERVRREKISERM 289
Query: 69 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
K LQDLVPGC+KVIGKA++LDEIINY+QSLQRQVEFLSMKL VN ++
Sbjct: 290 KFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPALDFN 340
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 9 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 68
++G K + AS + K E + P +DYIH+RAR GQAT+SHSLAER RREKISERM
Sbjct: 231 KDGPKRPISASRKSNGKQTEDNS-DAPKEDYIHIRARSGQATNSHSLAERVRREKISERM 289
Query: 69 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
K LQDLVPGC+KVIGKA++LDEIINY+QSLQRQVEFLSMKL VN ++
Sbjct: 290 KFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPALDFN 340
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/107 (69%), Positives = 87/107 (81%), Gaps = 3/107 (2%)
Query: 6 SKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKIS 65
++N + SK VE + + K SK EPPKDYIHVRARRGQATDSHSLAER RREKIS
Sbjct: 104 ARNVSNSKEGVEGTKSKKQK--RGSK-EEPPKDYIHVRARRGQATDSHSLAERVRREKIS 160
Query: 66 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 112
ERM+ LQ+LVPGC+KV GKAL+LDEIINY+Q+LQ QVEFLSMKL ++
Sbjct: 161 ERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQNQVEFLSMKLTSI 207
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 73/80 (91%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
EPP YIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKAL+LDEIIN
Sbjct: 164 EPPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIIN 223
Query: 94 YIQSLQRQVEFLSMKLEAVN 113
Y+QSLQ QVEFLSMKL +VN
Sbjct: 224 YVQSLQNQVEFLSMKLASVN 243
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/82 (82%), Positives = 74/82 (90%)
Query: 32 PSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 91
P EPP Y+HVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEI
Sbjct: 162 PEEPPTGYVHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEI 221
Query: 92 INYIQSLQRQVEFLSMKLEAVN 113
INY+QSLQ QVEFLSMKL +VN
Sbjct: 222 INYVQSLQNQVEFLSMKLASVN 243
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 95/135 (70%), Gaps = 9/135 (6%)
Query: 10 NGSKAEVEASSAAGNKPAESSKPSEPPK--DYIHVRARRGQATDSHSLAERARREKISER 67
+G++ E A A +K + + S+ PK DYIHVRARRGQATDSHSLAER RRE+ISER
Sbjct: 98 SGAEEEGTARGGATSKNKKKASGSDAPKETDYIHVRARRGQATDSHSLAERVRRERISER 157
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPT------ 121
MK LQ+LVPGC+K++GKA LDEIINY+QSLQRQVEFLSMKL A RM+L+ +
Sbjct: 158 MKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEFLSMKLAAAEPRMHLSSSNFFDRE 217
Query: 122 -IEGFHPKDLGEQAF 135
+ G D G F
Sbjct: 218 EVHGCSTWDAGLHGF 232
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/112 (67%), Positives = 85/112 (75%), Gaps = 7/112 (6%)
Query: 6 SKNE----NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARR 61
SKNE NG K ++ + A + E E P YIHVRARRGQATDSHSLAER RR
Sbjct: 116 SKNEKQGDNGKKKKINSKLVAKD---EKKANEEAPTGYIHVRARRGQATDSHSLAERVRR 172
Query: 62 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 113
EKISERMKILQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSMKL ++N
Sbjct: 173 EKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLTSLN 224
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 78/86 (90%), Gaps = 1/86 (1%)
Query: 28 ESSKP-SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
E+SKP + +DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC+KV GKA+
Sbjct: 18 ENSKPGAGNTQDYIHVRARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAM 77
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAV 112
+LDEIINY+QSLQRQVEFLSMKL AV
Sbjct: 78 MLDEIINYVQSLQRQVEFLSMKLAAV 103
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 96/134 (71%), Gaps = 5/134 (3%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
SS P ++YIHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA++L
Sbjct: 252 SSNGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVML 311
Query: 89 DEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMI-FGS--Q 145
DEIINY+QSLQ+QVEFLSMKL VN +N+ IE KD+ +T ++ FG
Sbjct: 312 DEIINYVQSLQQQVEFLSMKLATVNPELNI--DIERLLSKDILNSRGGSTSVLGFGPGMS 369
Query: 146 TAREYAQGSQQDWL 159
++ Y G Q L
Sbjct: 370 SSHPYPHGISQGTL 383
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/82 (82%), Positives = 74/82 (90%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 332
Query: 97 SLQRQVEFLSMKLEAVNSRMNL 118
SLQ QVEFLSMKL V+ R L
Sbjct: 333 SLQCQVEFLSMKLSTVDPRREL 354
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 91/125 (72%), Gaps = 2/125 (1%)
Query: 6 SKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKIS 65
S+ E + A + AA S P ++YIHVRARRGQAT+SHSLAER RREKIS
Sbjct: 206 SRTEQNTAANLRGKQAAKQAKENSHSGEAPKENYIHVRARRGQATNSHSLAERVRREKIS 265
Query: 66 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
ERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN +N+ IE
Sbjct: 266 ERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNI--DIERI 323
Query: 126 HPKDL 130
KD+
Sbjct: 324 LSKDI 328
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/82 (82%), Positives = 74/82 (90%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 253 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 312
Query: 97 SLQRQVEFLSMKLEAVNSRMNL 118
SLQ QVEFLSMKL V+ R L
Sbjct: 313 SLQCQVEFLSMKLSTVDPRREL 334
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 73/80 (91%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
EPP YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEIIN
Sbjct: 163 EPPTGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIIN 222
Query: 94 YIQSLQRQVEFLSMKLEAVN 113
Y+QSLQ QVEFLSMKL +VN
Sbjct: 223 YVQSLQNQVEFLSMKLASVN 242
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/104 (70%), Positives = 84/104 (80%), Gaps = 6/104 (5%)
Query: 15 EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 74
E A ++ G++ ++ KP DYIHVRARRGQATDSHSLAER RREKISERMK LQDL
Sbjct: 171 ETSADTSKGSE-VQNQKP-----DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 224
Query: 75 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
+PGCNKV GKA +LDEIINY+QSLQRQVEFLSMKL AVN ++
Sbjct: 225 IPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPGLDF 268
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/103 (65%), Positives = 81/103 (78%), Gaps = 6/103 (5%)
Query: 23 GNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 82
G + S+ E PK YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV
Sbjct: 106 GKREKSSTDQEEAPKGYIHVRARRGQATDSHSLAERVRRERISERMRLLQTLVPGCDKVT 165
Query: 83 GKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
GKAL+LDEIINY+QSLQ QVEFLSM++ + ++P + GF
Sbjct: 166 GKALILDEIINYVQSLQNQVEFLSMRIAS------MSPVLYGF 202
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/80 (83%), Positives = 73/80 (91%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
EPP YIHVRARRGQATDSHSLAER RRE+ISERMKILQ LVPGC+K+ GKAL+LDEIIN
Sbjct: 166 EPPAGYIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIIN 225
Query: 94 YIQSLQRQVEFLSMKLEAVN 113
Y+QSLQ QVEFLSMKL +VN
Sbjct: 226 YVQSLQNQVEFLSMKLASVN 245
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 87/104 (83%), Gaps = 3/104 (2%)
Query: 28 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
+SS +E PK +YIHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA+
Sbjct: 217 KSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 276
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
+LDEIINY+QSLQ+QVEFLSMKL VN +N+ IE KD+
Sbjct: 277 MLDEIINYVQSLQQQVEFLSMKLATVNPDVNV--DIERILSKDI 318
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 87/104 (83%), Gaps = 3/104 (2%)
Query: 28 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
+SS +E PK +YIHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA+
Sbjct: 64 KSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 123
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
+LDEIINY+QSLQ+QVEFLSMKL VN +N+ IE KD+
Sbjct: 124 MLDEIINYVQSLQQQVEFLSMKLATVNPDVNV--DIERILSKDI 165
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 81/98 (82%), Gaps = 6/98 (6%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
+S+ EPPK YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKAL+
Sbjct: 109 KSTTEDEPPKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALI 168
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
LDEIINY+QSLQ QVEFLSM++ + ++P + GF
Sbjct: 169 LDEIINYVQSLQNQVEFLSMRIAS------MSPVLYGF 200
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/97 (74%), Positives = 79/97 (81%), Gaps = 7/97 (7%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEIINY+QS
Sbjct: 163 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 222
Query: 98 LQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQA 134
LQRQVEFLSMKL VN P +E F+ DL ++
Sbjct: 223 LQRQVEFLSMKLATVN------PALE-FNSDDLFDKV 252
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 88/113 (77%), Gaps = 3/113 (2%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
++S S+ +YIHVRARRGQATDSHSLAER RREKI++RMK LQDLVP CNKV GKA++
Sbjct: 282 KNSNVSQKDDNYIHVRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVM 341
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGM 140
LDEIINY+QSLQ QVEFLSMKL VN +++ I+ F K++ +F + GM
Sbjct: 342 LDEIINYVQSLQHQVEFLSMKLATVNPKLDF--NIDNFFAKEMS-GSFSSKGM 391
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/89 (75%), Positives = 78/89 (87%)
Query: 30 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 89
S+ P + YIHVRARRGQATDSHSLAER RREKISERMK LQDLVP C+KV GKA++LD
Sbjct: 13 SQVMHPKQHYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLD 72
Query: 90 EIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
EIINY+QSLQRQ+EFLSMKL AV+ R+++
Sbjct: 73 EIINYVQSLQRQIEFLSMKLAAVDPRLDI 101
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/111 (67%), Positives = 86/111 (77%), Gaps = 2/111 (1%)
Query: 25 KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 84
K A+ + EPP YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GK
Sbjct: 163 KKAKEAAGGEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGK 222
Query: 85 ALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM-NLTPTIEGFHPKDLGEQA 134
AL+LDEII+Y+QSLQ QVEFLSMKL ++N M P I+ HP L + A
Sbjct: 223 ALMLDEIISYVQSLQNQVEFLSMKLASLNPLMYEFGPGID-MHPDVLRQLA 272
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 87/104 (83%), Gaps = 3/104 (2%)
Query: 28 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
ESS+ E PK +YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA+
Sbjct: 139 ESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 198
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
+LDEIINY+QSLQ+QVEFLSMKL VN +N+ I+ KDL
Sbjct: 199 MLDEIINYVQSLQQQVEFLSMKLATVNPEINI--DIDRILAKDL 240
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%), Gaps = 1/87 (1%)
Query: 28 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
E+ K S PK DYIHVRARRGQATDSHSLAERARREKIS++MK LQDLVPGCNK+ G+A
Sbjct: 22 ENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRAG 81
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVN 113
+LDEIINY+QSLQRQVEF+SMKL AVN
Sbjct: 82 MLDEIINYVQSLQRQVEFISMKLAAVN 108
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 87/104 (83%), Gaps = 3/104 (2%)
Query: 28 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
ESS+ E PK +YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA+
Sbjct: 191 ESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 250
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
+LDEIINY+QSLQ+QVEFLSMKL VN +N+ I+ KDL
Sbjct: 251 MLDEIINYVQSLQQQVEFLSMKLATVNPEINI--DIDRILAKDL 292
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/117 (64%), Positives = 87/117 (74%), Gaps = 7/117 (5%)
Query: 1 MKTSGSKN----ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLA 56
M ++ SKN +NG K + + A + E E P YIHVRARRGQATDSHSLA
Sbjct: 122 MTSANSKNVTQGDNGKKNKSNSKLVAKD---EKKANEEAPTGYIHVRARRGQATDSHSLA 178
Query: 57 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 113
ER RREKISERMK+LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSMKL ++N
Sbjct: 179 ERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLN 235
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
Query: 9 ENGSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISER 67
E+ + + ++ ++ NK +PS+ KD YIH+RARRGQAT+SHSLAER RREKISER
Sbjct: 138 EDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISER 197
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
MK LQDLVPGC+KV GKA++LDEIINY+QSLQ Q+EFLSMKL AVN ++
Sbjct: 198 MKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDF 248
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 86/111 (77%), Gaps = 8/111 (7%)
Query: 17 EASSAAGNKPAESSKP--SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 74
E+S +G K SSK E PK YIHVRARRGQATD+HSLAER RRE+ISERM++LQ L
Sbjct: 84 ESSKRSGGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVLQAL 143
Query: 75 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
VPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ + L+P + GF
Sbjct: 144 VPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS------LSPVLYGF 188
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 86/111 (77%), Gaps = 8/111 (7%)
Query: 17 EASSAAGNKPAESSKP--SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 74
E+S +G K SSK E PK YIHVRARRGQATD+HSLAER RRE+ISERM++LQ L
Sbjct: 84 ESSKRSGGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISERMRVLQAL 143
Query: 75 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
VPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ + L+P + GF
Sbjct: 144 VPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS------LSPVLYGF 188
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 82/106 (77%), Gaps = 9/106 (8%)
Query: 23 GNKPAESSKP---SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 79
G K SSK E PK YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+
Sbjct: 89 GGKRGRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCD 148
Query: 80 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
KV GKALVLDEIINY+QSLQ QVEFLSMK+ +L+P + GF
Sbjct: 149 KVTGKALVLDEIINYVQSLQNQVEFLSMKI------ASLSPVLYGF 188
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/116 (65%), Positives = 93/116 (80%), Gaps = 4/116 (3%)
Query: 4 SGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARRE 62
SGS +++ K + + S NK ESS+ E PK+ YIH+RARRGQAT+SHSLAER RRE
Sbjct: 12 SGS-DQSQKKHKNDQSKETMNK--ESSQNEEEPKEKYIHMRARRGQATNSHSLAERVRRE 68
Query: 63 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
KISERM++LQ+LVPGCNK+ GKA +LDEIINYIQSLQ+QVEFLSMKL VN +N+
Sbjct: 69 KISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQVEFLSMKLATVNPDINI 124
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
Query: 9 ENGSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISER 67
E+ + + ++ ++ NK +PS+ KD YIH+RARRGQAT+SHSLAER RREKISER
Sbjct: 189 EDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISER 248
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
MK LQDLVPGC+KV GKA++LDEIINY+QSLQ Q+EFLSMKL AVN ++
Sbjct: 249 MKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDF 299
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 87/104 (83%), Gaps = 3/104 (2%)
Query: 28 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
ESS+ E PK +YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA+
Sbjct: 189 ESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 248
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
+LDEIINY+QSLQ+QVEFLSMKL VN +N+ I+ KDL
Sbjct: 249 MLDEIINYVQSLQQQVEFLSMKLATVNPEINI--DIDRILAKDL 290
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 72/80 (90%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
E P YIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC++V GKALVLDEIIN
Sbjct: 137 EVPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIIN 196
Query: 94 YIQSLQRQVEFLSMKLEAVN 113
Y+QSLQ QVEFLSMKL +VN
Sbjct: 197 YVQSLQNQVEFLSMKLASVN 216
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 82/106 (77%), Gaps = 9/106 (8%)
Query: 23 GNKPAESSKP---SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN 79
G K SSK E PK YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+
Sbjct: 99 GGKRGRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCD 158
Query: 80 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
KV GKALVLDEIINY+QSLQ QVEFLSMK+ +L+P + GF
Sbjct: 159 KVTGKALVLDEIINYVQSLQNQVEFLSMKI------ASLSPVLYGF 198
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 76/93 (81%)
Query: 26 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
P S P DYIHVRARRGQATDSHSLAERARREKIS++MK LQDLVPGCNK+ GKA
Sbjct: 174 PNASKVSGSPKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKA 233
Query: 86 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
+LDEIINY+QSLQRQVEFLS+KL +N R +
Sbjct: 234 GMLDEIINYVQSLQRQVEFLSLKLATMNPRTDF 266
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 76/93 (81%)
Query: 26 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
P S P DYIHVRARRGQATDSHSLAERARREKIS++MK LQDLVPGCNK+ GKA
Sbjct: 174 PNASKVSGSPKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKA 233
Query: 86 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
+LDEIINY+QSLQRQVEFLS+KL +N R +
Sbjct: 234 GMLDEIINYVQSLQRQVEFLSLKLATMNPRTDF 266
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/96 (72%), Positives = 80/96 (83%), Gaps = 2/96 (2%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
P DYIHVRARRGQATDSHSLAERARREKIS++MK LQDLVPGCNK+ G+A +LDEIINY
Sbjct: 195 PKTDYIHVRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGRAGMLDEIINY 254
Query: 95 IQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
+QSLQRQVEFLSMKL A+N R I+ F K++
Sbjct: 255 VQSLQRQVEFLSMKLAALNPRPEF--NIDNFSGKEV 288
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
Query: 7 KNENGSKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKIS 65
K E + A+V + +S+ E PK ++IHVRARRGQAT+SHSLAER RREKIS
Sbjct: 227 KGEQNNGADVRGKQSVKQAKDNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKIS 286
Query: 66 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
ERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVEFLSMKL VN +N
Sbjct: 287 ERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNF 339
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 77/92 (83%), Gaps = 6/92 (6%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
E PK YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKALVLDEIIN
Sbjct: 112 EEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIIN 171
Query: 94 YIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
Y+QSLQ QVEFLSMK+ +L+P + GF
Sbjct: 172 YVQSLQNQVEFLSMKI------ASLSPVLYGF 197
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 85/111 (76%), Gaps = 8/111 (7%)
Query: 17 EASSAAGNKPAESSK--PSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 74
E++ G K SSK E PK YIHVRARRGQATDSHSLAER RRE+ISERM++LQ L
Sbjct: 82 ESTKKKGGKRDRSSKEVDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQAL 141
Query: 75 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
VPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ + L+P + GF
Sbjct: 142 VPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS------LSPVLYGF 186
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 72/77 (93%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEIINY+Q
Sbjct: 49 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQ 108
Query: 97 SLQRQVEFLSMKLEAVN 113
SLQRQVE LSMKL +VN
Sbjct: 109 SLQRQVESLSMKLASVN 125
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 77/82 (93%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC+K+ GKA++L+EIINY+Q
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQ 60
Query: 97 SLQRQVEFLSMKLEAVNSRMNL 118
SLQRQ+EFLSMKL AV+ R+++
Sbjct: 61 SLQRQIEFLSMKLAAVDPRLDI 82
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/80 (82%), Positives = 75/80 (93%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y HVRAR+GQAT++HSLAER RREKISERMK+LQDLVPGC+KV GKAL+LDEIINY+QSL
Sbjct: 173 YSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSL 232
Query: 99 QRQVEFLSMKLEAVNSRMNL 118
QRQVEFLSMKL AVN R++L
Sbjct: 233 QRQVEFLSMKLSAVNPRIDL 252
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/97 (69%), Positives = 81/97 (83%), Gaps = 3/97 (3%)
Query: 21 AAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 80
A KP ++ E DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK
Sbjct: 105 CADEKPGDAGAKRE---DYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNK 161
Query: 81 VIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
+ GKA++LDEIINY+QSLQRQVEFLSMKL A++ +N
Sbjct: 162 ITGKAMMLDEIINYVQSLQRQVEFLSMKLSAISPELN 198
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/77 (85%), Positives = 72/77 (93%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+Q
Sbjct: 436 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQ 495
Query: 97 SLQRQVEFLSMKLEAVN 113
SLQRQVE LSMKL +VN
Sbjct: 496 SLQRQVENLSMKLASVN 512
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/78 (83%), Positives = 71/78 (91%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+QS
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 98 LQRQVEFLSMKLEAVNSR 115
LQRQ+EFLSMKL VN R
Sbjct: 228 LQRQIEFLSMKLAIVNPR 245
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/104 (68%), Positives = 86/104 (82%), Gaps = 3/104 (2%)
Query: 28 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
ESS+ E PK +YIH+RARRGQAT+SHSLAER RREKISERM++LQ+L PGCNK+ GKA+
Sbjct: 191 ESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGKAV 250
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
+LDEIINY+QSLQ+QVEFLSMKL VN +N+ I+ KDL
Sbjct: 251 MLDEIINYVQSLQQQVEFLSMKLATVNPEINI--DIDRILAKDL 292
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/84 (75%), Positives = 76/84 (90%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
P +++IHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY
Sbjct: 262 PKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINY 321
Query: 95 IQSLQRQVEFLSMKLEAVNSRMNL 118
+QSLQ+QVEFLSMKL VN +N
Sbjct: 322 VQSLQQQVEFLSMKLATVNPELNF 345
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/78 (83%), Positives = 71/78 (91%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+QS
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 98 LQRQVEFLSMKLEAVNSR 115
LQRQ+EFLSMKL VN R
Sbjct: 228 LQRQIEFLSMKLAIVNPR 245
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/78 (83%), Positives = 71/78 (91%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+QS
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 98 LQRQVEFLSMKLEAVNSR 115
LQRQ+EFLSMKL VN R
Sbjct: 228 LQRQIEFLSMKLAIVNPR 245
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/78 (83%), Positives = 71/78 (91%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+QS
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227
Query: 98 LQRQVEFLSMKLEAVNSR 115
LQRQ+EFLSMKL VN R
Sbjct: 228 LQRQIEFLSMKLAIVNPR 245
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/78 (83%), Positives = 71/78 (91%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+QS
Sbjct: 165 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 224
Query: 98 LQRQVEFLSMKLEAVNSR 115
LQRQ+EFLSMKL VN R
Sbjct: 225 LQRQIEFLSMKLAVVNPR 242
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 79/96 (82%), Gaps = 2/96 (2%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
P DYIHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY
Sbjct: 233 PKDDYIHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINY 292
Query: 95 IQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
+QSLQ+QVEFLSMKL VN L +E KD+
Sbjct: 293 VQSLQQQVEFLSMKLATVNPE--LYNDVEKIQSKDI 326
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/111 (66%), Positives = 86/111 (77%), Gaps = 2/111 (1%)
Query: 25 KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 84
K A+ + EPP YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GK
Sbjct: 163 KKAKEAAGGEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGK 222
Query: 85 ALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM-NLTPTIEGFHPKDLGEQA 134
AL+LDEII+Y+QSLQ QVEFLSMKL +++ M P I+ HP L + A
Sbjct: 223 ALMLDEIISYVQSLQNQVEFLSMKLASLSPLMYEFGPGID-MHPDVLRQLA 272
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/134 (59%), Positives = 94/134 (70%), Gaps = 14/134 (10%)
Query: 13 KAEVEASSAAGNKP----AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 68
KAE E S+ K E+S + P DYIHVRARRG+ATD HSLAERARREKIS++M
Sbjct: 109 KAEDETESSMKGKTNMSNTETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISKKM 167
Query: 69 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPK 128
K LQD+VPGCNKV GKA +LDEIINY+QSLQ+QVEFLSMKL +N P +E H
Sbjct: 168 KCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVIN------PELEC-HID 220
Query: 129 DLGEQAFDA--TGM 140
DL + F A TG+
Sbjct: 221 DLSAKQFQAYFTGL 234
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/125 (58%), Positives = 92/125 (73%), Gaps = 8/125 (6%)
Query: 3 TSGSKNENGSKAEVEASSAAGNKP--AESSKPSEPPKDYIHVRARRGQATDSHSLAERAR 60
T+ S N SK E++ G K E+++ E PK YIHVRARRGQATDSHSL+ER R
Sbjct: 64 TTASLNSAHSKETKESTRKRGGKKQDKETAEEEEEPKGYIHVRARRGQATDSHSLSERVR 123
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 120
RE+ISERM++LQ LVPGC+KV GKAL+LDEIINY++SLQ QVEFLSM++ + L+P
Sbjct: 124 RERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQVEFLSMRIAS------LSP 177
Query: 121 TIEGF 125
+ GF
Sbjct: 178 VVYGF 182
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/115 (63%), Positives = 84/115 (73%), Gaps = 8/115 (6%)
Query: 12 SKAEVEASSAAGNKPAESSKPSEPPK--------DYIHVRARRGQATDSHSLAERARREK 63
+++ ++ S GN A S E K DYIHVRARRGQATD HSLAERARREK
Sbjct: 149 TESNMKGKSNMGNTEASSDTSKEISKGASESQKLDYIHVRARRGQATDRHSLAERARREK 208
Query: 64 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
IS++MK LQDLVPGCNKV GKA +LDEIINY+QSLQRQVEFLSMKL +N + L
Sbjct: 209 ISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLSMKLAVLNPELEL 263
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/80 (80%), Positives = 74/80 (92%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLDEIIN++QSL
Sbjct: 198 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSL 257
Query: 99 QRQVEFLSMKLEAVNSRMNL 118
QRQVEFLSM+L AVN R++
Sbjct: 258 QRQVEFLSMRLAAVNPRVDF 277
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/118 (61%), Positives = 92/118 (77%), Gaps = 8/118 (6%)
Query: 27 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
AE+SK ++YIHVRA+RGQAT+SHSLAER RRE+ISERM++LQ+LVPGCNK+ GKA+
Sbjct: 224 AEASK-----ENYIHVRAKRGQATNSHSLAERVRRERISERMRLLQELVPGCNKITGKAV 278
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD-LGEQAFDATGMIFG 143
+LDEIINY+QSLQ+QVEFLSMKL VN +N+ IE KD L + +AT + G
Sbjct: 279 MLDEIINYVQSLQQQVEFLSMKLATVNPELNV--DIERLLSKDILHSRGSNATALGIG 334
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/118 (63%), Positives = 84/118 (71%), Gaps = 12/118 (10%)
Query: 13 KAEVEAS----SAAGNKPAESSKPSEPPK--------DYIHVRARRGQATDSHSLAERAR 60
+AE E+S S GN A S E K DYIHVRARRGQATD HSLAERAR
Sbjct: 144 EAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERAR 203
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
REKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQVEFLSMKL +N + L
Sbjct: 204 REKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELEL 261
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 93/134 (69%), Gaps = 7/134 (5%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLDEII+++QSL
Sbjct: 194 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSL 253
Query: 99 QRQVEFLSMKLEAVNSRMNLT-PTIEGFHPKDLGEQAFDATGM--IFGSQTAREYAQGSQ 155
QRQVEFLSM+L AVN R++ ++ L + F + M ++ A E Q Q
Sbjct: 254 QRQVEFLSMRLAAVNPRIDFNLDSLLAPESGSLVDSNFPSMVMPLMWPDVQANENRQPYQ 313
Query: 156 QDW----LHMQVGG 165
Q W LH V G
Sbjct: 314 QLWNDDTLHQPVWG 327
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 74/82 (90%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY+HVRA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 133 EDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQ 192
Query: 97 SLQRQVEFLSMKLEAVNSRMNL 118
SLQRQVEFLSMKL VN +
Sbjct: 193 SLQRQVEFLSMKLATVNPELGF 214
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/118 (63%), Positives = 84/118 (71%), Gaps = 12/118 (10%)
Query: 13 KAEVEAS----SAAGNKPAESSKPSEPPK--------DYIHVRARRGQATDSHSLAERAR 60
+AE E+S S GN A S E K DYIHVRARRGQATD HSLAERAR
Sbjct: 144 EAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERAR 203
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
REKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQVEFLSMKL +N + L
Sbjct: 204 REKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELEL 261
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/118 (63%), Positives = 84/118 (71%), Gaps = 12/118 (10%)
Query: 13 KAEVEAS----SAAGNKPAESSKPSEPPK--------DYIHVRARRGQATDSHSLAERAR 60
+AE E+S S GN A S E K DYIHVRARRGQATD HSLAERAR
Sbjct: 127 EAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERAR 186
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
REKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQVEFLSMKL +N + L
Sbjct: 187 REKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELEL 244
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
KDYIH+R+RRGQAT+SHSLAER RREKISERMK+LQDLVPGCNKV GKALVL+ IINY+Q
Sbjct: 107 KDYIHLRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQ 166
Query: 97 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 127
SLQ QVE LS+KL +V SR + I G HP
Sbjct: 167 SLQSQVEILSVKLTSVLSRCHFDLQING-HP 196
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/80 (81%), Positives = 73/80 (91%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
YIHVRAR+GQAT+ HSLAER RREKISERMK+LQDLVPGC KV GKA++LDEIINY+QSL
Sbjct: 171 YIHVRARKGQATNRHSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSL 230
Query: 99 QRQVEFLSMKLEAVNSRMNL 118
QRQVEFLSMKL AVN ++ L
Sbjct: 231 QRQVEFLSMKLAAVNPQLGL 250
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/118 (63%), Positives = 84/118 (71%), Gaps = 12/118 (10%)
Query: 13 KAEVEAS----SAAGNKPAESSKPSEPPK--------DYIHVRARRGQATDSHSLAERAR 60
+AE E+S S GN A S E K DYIHVRARRGQATD HSLAERAR
Sbjct: 144 EAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERAR 203
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
REKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQVEFLSMKL +N + L
Sbjct: 204 REKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELEL 261
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 92/122 (75%), Gaps = 3/122 (2%)
Query: 9 ENGSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISER 67
E+ + + ++S++ NK + S+ KD YIH+RARRGQAT+SHSLAER RREKISER
Sbjct: 134 EDKMQKDEQSSNSNVNKTNSEKQASDSLKDGYIHMRARRGQATNSHSLAERVRREKISER 193
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 127
MK LQDLVPGC+KV GKA++LDEIINY+QSLQ Q+EFLSMKL AVN ++ +E
Sbjct: 194 MKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDF--NLESLLA 251
Query: 128 KD 129
KD
Sbjct: 252 KD 253
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 79/93 (84%), Gaps = 2/93 (2%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 93 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 152
Query: 97 SLQRQVEFLSMKLEAVNSRMNLTPTI--EGFHP 127
SLQRQ+EFLSMKL A+ +N + E HP
Sbjct: 153 SLQRQIEFLSMKLSAIGPGLNCDLDLQDEQDHP 185
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 79/93 (84%), Gaps = 2/93 (2%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 97 SLQRQVEFLSMKLEAVNSRMNLTPTI--EGFHP 127
SLQRQ+EFLSMKL A+ +N + E HP
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLNCDLDLQDEQDHP 211
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 91/127 (71%), Gaps = 8/127 (6%)
Query: 12 SKAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKI 70
++AE E S + + + SE K DYIHVRARRG+ATD HSLAERARREKIS++MK
Sbjct: 110 TEAETETSMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKC 169
Query: 71 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
LQD+VPGC KV GKA +LDEIINY+QSLQ+QVEFLSMKL +N P +E FH +L
Sbjct: 170 LQDIVPGCTKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVLN------PELE-FHINEL 222
Query: 131 GEQAFDA 137
+ F A
Sbjct: 223 STKQFQA 229
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 79/91 (86%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
ESS+ E Y+HVRARRGQATDSHSLAERARREKI++RMK+LQ+LVPGCNK+ G ALV
Sbjct: 163 ESSQQEEDMLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALV 222
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
LDEIIN++QSLQ QVEFLSM+L AVN R++
Sbjct: 223 LDEIINHVQSLQCQVEFLSMRLAAVNPRIDF 253
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 75/81 (92%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 97 SLQRQVEFLSMKLEAVNSRMN 117
SLQRQ+EFLSMKL A+ +N
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLN 199
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/80 (82%), Positives = 71/80 (88%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+PP YIHVRARRGQATDSHSLAER RREKIS+RM LQ LVPGC+KV GKALVLDEIIN
Sbjct: 130 DPPTGYIHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEIIN 189
Query: 94 YIQSLQRQVEFLSMKLEAVN 113
Y+QSLQ QVEFLSMKL +VN
Sbjct: 190 YVQSLQNQVEFLSMKLASVN 209
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 85/108 (78%), Gaps = 2/108 (1%)
Query: 13 KAEVEASSAAGNKPAESSK-PSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKI 70
K+ + + A+ + E+SK SE K DYIHVRARRGQATD HSLAERARREKIS++MK
Sbjct: 154 KSNMRNTEASSDTSKETSKKASEIQKLDYIHVRARRGQATDRHSLAERARREKISKKMKY 213
Query: 71 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
LQD+VPGCNKV GKA +LDEIINY+Q LQRQVEFLSMKL +N + L
Sbjct: 214 LQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELEL 261
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/107 (65%), Positives = 86/107 (80%), Gaps = 8/107 (7%)
Query: 12 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 71
SK EV + A AES++ +DY+H+RA+RGQAT++HSLAER RREKI+ERMK L
Sbjct: 96 SKREVNSEKAGD---AESNR-----EDYVHIRAKRGQATNNHSLAERFRREKINERMKHL 147
Query: 72 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
QDLVPGCNK+ GKA++LDEIINY+QSLQRQVEFLSMKL AV+ +N
Sbjct: 148 QDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAVSPELNC 194
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 75/82 (91%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 119 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 178
Query: 97 SLQRQVEFLSMKLEAVNSRMNL 118
SLQRQ+EFLSMKL A+ +N
Sbjct: 179 SLQRQIEFLSMKLSAIGPGLNC 200
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 75/82 (91%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 93 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 152
Query: 97 SLQRQVEFLSMKLEAVNSRMNL 118
SLQRQ+EFLSMKL A+ +N
Sbjct: 153 SLQRQIEFLSMKLSAIGPGLNC 174
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/140 (52%), Positives = 90/140 (64%), Gaps = 13/140 (9%)
Query: 13 KAEVEASSAAGNKPAESSKPSEPP------------KDYIHVRARRGQATDSHSLAERAR 60
K E + K AE + P + P DYIHVRARRGQATDSHSLAER R
Sbjct: 123 KGRPERARPGAKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVR 182
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 120
RE+ISERM+ LQ+LVPGCNKV GKA +LDEIINY+QSLQ+QVEFLSMK+ A N +N
Sbjct: 183 RERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFN- 241
Query: 121 TIEGFHPKDLGEQAFDATGM 140
+E + L + A + +
Sbjct: 242 IVEDLFGRQLSQAACNPAAL 261
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/103 (65%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGCNKV GKA +LDEIINY+QS
Sbjct: 160 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQS 219
Query: 98 LQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGM 140
LQ+QVEFLSMK+ A N +N +E + L + A + +
Sbjct: 220 LQKQVEFLSMKIAASNPVVNFN-IVEDLFGRQLSQAACNPAAL 261
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 85/127 (66%), Gaps = 12/127 (9%)
Query: 13 KAEVEASSAAGNKPAESSKPSEPP------------KDYIHVRARRGQATDSHSLAERAR 60
K E + K AE + P + P DYIHVRARRGQATDSHSLAER R
Sbjct: 123 KGRPERARPGAKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVR 182
Query: 61 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 120
RE+ISERM+ LQ+LVPGCNKV GKA +LDEIINY+QSLQ+QVEFLSMK+ A N +N
Sbjct: 183 RERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFNI 242
Query: 121 TIEGFHP 127
+ F P
Sbjct: 243 VEDLFGP 249
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 75/81 (92%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 123 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQ 182
Query: 97 SLQRQVEFLSMKLEAVNSRMN 117
SLQRQ+EFLSMKL A+ +N
Sbjct: 183 SLQRQIEFLSMKLSAIGPGLN 203
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 87/113 (76%), Gaps = 4/113 (3%)
Query: 6 SKNENGSKAEVEAS-SAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
S+ E G + E S AG K ++ E +Y+HVRA+RGQAT+SHSLAER RREKI
Sbjct: 594 SQEETGEMPQRELSMEHAGEKAGDADASRE---EYVHVRAKRGQATNSHSLAERFRREKI 650
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
+ERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQVEFLSMKL ++ +N
Sbjct: 651 NERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELN 703
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 85/114 (74%), Gaps = 11/114 (9%)
Query: 17 EASSAAGNKP-----AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 71
E+ S G +P +S+ E K YIHVRARRGQATDSHSLAER RRE+ISERM++L
Sbjct: 92 ESKSKRGKRPNKETEEKSTTEDEATKGYIHVRARRGQATDSHSLAERVRRERISERMRML 151
Query: 72 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
Q LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ + ++P + GF
Sbjct: 152 QALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS------MSPVLYGF 199
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/77 (84%), Positives = 71/77 (92%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC KV GKA++LDEIINY+Q
Sbjct: 383 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQ 442
Query: 97 SLQRQVEFLSMKLEAVN 113
SLQRQVE LSMK+ +VN
Sbjct: 443 SLQRQVESLSMKVASVN 459
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 87/113 (76%), Gaps = 4/113 (3%)
Query: 6 SKNENGSKAEVEAS-SAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
S+ E G + E S AG K ++ E +Y+HVRA+RGQAT+SHSLAER RREKI
Sbjct: 594 SQEETGEMPQRELSMEHAGEKAGDADASRE---EYVHVRAKRGQATNSHSLAERFRREKI 650
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
+ERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQVEFLSMKL ++ +N
Sbjct: 651 NERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELN 703
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 87/113 (76%), Gaps = 4/113 (3%)
Query: 6 SKNENGSKAEVEAS-SAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
S+ E G + E S AG K ++ E +Y+HVRA+RGQAT+SHSLAER RREKI
Sbjct: 594 SQEETGEMPQRELSMEHAGEKAGDADASRE---EYVHVRAKRGQATNSHSLAERFRREKI 650
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
+ERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQVEFLSMKL ++ +N
Sbjct: 651 NERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELN 703
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/103 (64%), Positives = 80/103 (77%), Gaps = 6/103 (5%)
Query: 23 GNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 82
G K + E P+ +IHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV
Sbjct: 88 GKKHSRDQMEEEAPQGFIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVT 147
Query: 83 GKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
GKAL+LDEIINY+QSLQ QVEFLSM++ + L+P + GF
Sbjct: 148 GKALILDEIINYVQSLQNQVEFLSMRIAS------LSPVLYGF 184
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 93/131 (70%), Gaps = 10/131 (7%)
Query: 7 KNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISE 66
K E+ ++ ++ S N E+S + P DYIHVRARRG+ATD HSLAERARREKIS+
Sbjct: 105 KAEDETEPSMKGKSNMSN--TETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISK 161
Query: 67 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFH 126
+MK LQD+VPGCNKV GKA +LDEIINY+QSLQ+QVEFLSMKL +N P +E H
Sbjct: 162 KMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVIN------PELEC-H 214
Query: 127 PKDLGEQAFDA 137
DL + F A
Sbjct: 215 IDDLSAKQFQA 225
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 87/113 (76%), Gaps = 4/113 (3%)
Query: 6 SKNENGSKAEVEAS-SAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
S+ E G + E S AG K ++ E +Y+HVRA+RGQAT+SHSLAER RREKI
Sbjct: 91 SQEETGEMPQRELSMEHAGEKAGDADASRE---EYVHVRAKRGQATNSHSLAERFRREKI 147
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
+ERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQVEFLSMKL ++ +N
Sbjct: 148 NERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELN 200
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 93/131 (70%), Gaps = 10/131 (7%)
Query: 7 KNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISE 66
K E+ ++ ++ S N E+S + P DYIHVRARRG+ATD HSLAERARREKIS+
Sbjct: 109 KAEDETEPSMKGKSNMSN--TETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISK 165
Query: 67 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFH 126
+MK LQD+VPGCNKV GKA +LDEIINY+QSLQ+QVEFLSMKL +N P +E H
Sbjct: 166 KMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVIN------PELEC-H 218
Query: 127 PKDLGEQAFDA 137
DL + F A
Sbjct: 219 IDDLSAKQFQA 229
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 93/131 (70%), Gaps = 10/131 (7%)
Query: 7 KNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISE 66
K E+ ++ ++ S N E+S + P DYIHVRARRG+ATD HSLAERARREKIS+
Sbjct: 109 KAEDETEPSMKGKSNMSN--TETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISK 165
Query: 67 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFH 126
+MK LQD+VPGCNKV GKA +LDEIINY+QSLQ+QVEFLSMKL +N P +E H
Sbjct: 166 KMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVIN------PELEC-H 218
Query: 127 PKDLGEQAFDA 137
DL + F A
Sbjct: 219 IDDLSAKQFQA 229
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 93/131 (70%), Gaps = 10/131 (7%)
Query: 7 KNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISE 66
K E+ ++ ++ S N E+S + P DYIHVRARRG+ATD HSLAERARREKIS+
Sbjct: 109 KAEDETEPSMKGKSNMSN--TETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISK 165
Query: 67 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFH 126
+MK LQD+VPGCNKV GKA +LDEIINY+QSLQ+QVEFLSMKL +N P +E H
Sbjct: 166 KMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVIN------PELEC-H 218
Query: 127 PKDLGEQAFDA 137
DL + F A
Sbjct: 219 IDDLSAKQFQA 229
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 75/81 (92%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DY+HVRARRG+ATDSHSLAERARREKISERMK LQ+LVPGCNK+ GKA +LDEIINY+QS
Sbjct: 2 DYVHVRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQS 61
Query: 98 LQRQVEFLSMKLEAVNSRMNL 118
LQ+QVEFLSMK+ A+N R++
Sbjct: 62 LQQQVEFLSMKVAALNHRVDF 82
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 79/100 (79%), Gaps = 7/100 (7%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+QS
Sbjct: 121 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQS 180
Query: 98 LQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDA 137
LQ+QVEFLSMKL +N P +E H DL + F A
Sbjct: 181 LQQQVEFLSMKLSVIN------PELEC-HIDDLSAKQFQA 213
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 71/82 (86%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
P YIHVRARRGQATDSHSLAER RREKISERM +LQ LVPGC+KV GKALVL+EIINY
Sbjct: 112 PSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINY 171
Query: 95 IQSLQRQVEFLSMKLEAVNSRM 116
+QSLQ QVEFLSMKL +VN +
Sbjct: 172 VQSLQHQVEFLSMKLASVNPML 193
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 85/142 (59%), Gaps = 48/142 (33%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERA--------------------------------RR 61
EPPKDYIHVRARRGQATDSHSLAER RR
Sbjct: 270 EPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRR 329
Query: 62 EKISERMKILQDLVPGCNKV--------------IGKALVLDEIINYIQSLQRQVEFLSM 107
EKISERMK+LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSM
Sbjct: 330 EKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSM 389
Query: 108 KLEAVNSRMNLTPTIEGFHPKD 129
KL VN +++ ++ F PKD
Sbjct: 390 KLSTVNPQLDF--DVDNFIPKD 409
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 85/142 (59%), Gaps = 48/142 (33%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERA--------------------------------RR 61
EPPKDYIHVRARRGQATDSHSLAER RR
Sbjct: 270 EPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRR 329
Query: 62 EKISERMKILQDLVPGCNKV--------------IGKALVLDEIINYIQSLQRQVEFLSM 107
EKISERMK+LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSM
Sbjct: 330 EKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSM 389
Query: 108 KLEAVNSRMNLTPTIEGFHPKD 129
KL VN +++ ++ F PKD
Sbjct: 390 KLSTVNPQLDF--DVDNFIPKD 409
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 74/82 (90%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+Q
Sbjct: 141 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 200
Query: 97 SLQRQVEFLSMKLEAVNSRMNL 118
SLQRQVEFLSMKL VN +
Sbjct: 201 SLQRQVEFLSMKLATVNPELGF 222
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 74/82 (90%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+Q
Sbjct: 133 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 192
Query: 97 SLQRQVEFLSMKLEAVNSRMNL 118
SLQRQVEFLSMKL VN +
Sbjct: 193 SLQRQVEFLSMKLSTVNPELGF 214
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 79/100 (79%), Gaps = 7/100 (7%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+QS
Sbjct: 121 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQS 180
Query: 98 LQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDA 137
LQ+QVEFLSMKL +N P +E H DL + F A
Sbjct: 181 LQQQVEFLSMKLSVIN------PELEC-HIDDLSAKQFQA 213
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 74/82 (90%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+Q
Sbjct: 135 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 194
Query: 97 SLQRQVEFLSMKLEAVNSRMNL 118
SLQRQVEFLSMKL VN +
Sbjct: 195 SLQRQVEFLSMKLATVNPELGF 216
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 85/142 (59%), Gaps = 48/142 (33%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERA--------------------------------RR 61
EPPKDYIHVRARRGQATDSHSLAER RR
Sbjct: 149 EPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRR 208
Query: 62 EKISERMKILQDLVPGCNKV--------------IGKALVLDEIINYIQSLQRQVEFLSM 107
EKISERMK+LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSM
Sbjct: 209 EKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSM 268
Query: 108 KLEAVNSRMNLTPTIEGFHPKD 129
KL VN +++ ++ F PKD
Sbjct: 269 KLSTVNPQLDF--DVDNFIPKD 288
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 78/95 (82%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 157 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQS 216
Query: 98 LQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGE 132
LQ+QVEFLSMK+ A N +N + F + LG+
Sbjct: 217 LQKQVEFLSMKIAASNPVVNFDIVEDLFGGRRLGQ 251
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 75/84 (89%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
P ++Y HVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY
Sbjct: 156 PKENYFHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINY 215
Query: 95 IQSLQRQVEFLSMKLEAVNSRMNL 118
+QSLQ+QVEFLSMKL VN + +
Sbjct: 216 VQSLQQQVEFLSMKLATVNPELQI 239
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 75/82 (91%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY+HVRA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+Q
Sbjct: 142 EDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 201
Query: 97 SLQRQVEFLSMKLEAVNSRMNL 118
SLQRQVEFLSMKL VN ++
Sbjct: 202 SLQRQVEFLSMKLATVNPELSF 223
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 97/147 (65%), Gaps = 14/147 (9%)
Query: 4 SGSKNENGSKAEVEASSAAGNKP--------AESSKPSEPPKDYIHVRARRGQATDSHSL 55
S ++++ K + E+ S G +P +S+ E + YIHVRARRGQATDSHSL
Sbjct: 93 SSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSL 152
Query: 56 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR 115
AER RRE+ISERM++LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ +
Sbjct: 153 AERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS---- 208
Query: 116 MNLTPTIEGFHPKDLGEQAFDATGMIF 142
++P + GF G G++F
Sbjct: 209 --MSPVLYGFGLDSDGLHDHAQMGVMF 233
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/78 (87%), Positives = 71/78 (91%), Gaps = 1/78 (1%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
+SK SE P DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNKV GKA +L
Sbjct: 117 NSKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGML 175
Query: 89 DEIINYIQSLQRQVEFLS 106
DEIINY+QSLQRQVEFLS
Sbjct: 176 DEIINYVQSLQRQVEFLS 193
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/80 (81%), Positives = 71/80 (88%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
E P YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKA++LDEIIN
Sbjct: 127 EAPVGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIIN 186
Query: 94 YIQSLQRQVEFLSMKLEAVN 113
Y+QSLQ QVEFLSMKL V+
Sbjct: 187 YVQSLQNQVEFLSMKLATVS 206
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++QSL
Sbjct: 197 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 256
Query: 99 QRQVEFLSMKLEAVNSRMNLT-PTIEGFHPKDLGEQAFDATGM 140
QRQVE LSM+L AVN R++ TI L + +F+ T M
Sbjct: 257 QRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNGTAM 299
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 74/82 (90%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
++Y+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 133 ENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQ 192
Query: 97 SLQRQVEFLSMKLEAVNSRMNL 118
SLQRQVEFLSMKL VN +
Sbjct: 193 SLQRQVEFLSMKLATVNPELGF 214
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 92/130 (70%), Gaps = 14/130 (10%)
Query: 4 SGSKNENGSKAEVEASSAAGNKP--------AESSKPSEPPKDYIHVRARRGQATDSHSL 55
S ++++ K + E+ S G +P +S+ E + YIHVRARRGQATDSHSL
Sbjct: 93 SSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSL 152
Query: 56 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR 115
AER RRE+ISERM++LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ +
Sbjct: 153 AERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS---- 208
Query: 116 MNLTPTIEGF 125
++P + GF
Sbjct: 209 --MSPVLYGF 216
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 78/97 (80%), Gaps = 6/97 (6%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
S+ E K YIHVRARRGQATDSHSLAER RRE+ISERM++LQ LVPGC+KV GKA+VL
Sbjct: 118 STDEDEASKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVL 177
Query: 89 DEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
DEIINY+QSLQ QVEFLSM++ +++P + GF
Sbjct: 178 DEIINYVQSLQNQVEFLSMRI------ASMSPVLYGF 208
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 92/130 (70%), Gaps = 14/130 (10%)
Query: 4 SGSKNENGSKAEVEASSAAGNKP--------AESSKPSEPPKDYIHVRARRGQATDSHSL 55
S ++++ K + E+ S G +P +S+ E + YIHVRARRGQATDSHSL
Sbjct: 93 SSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATEDEATRGYIHVRARRGQATDSHSL 152
Query: 56 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR 115
AER RRE+ISERM++LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ +
Sbjct: 153 AERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS---- 208
Query: 116 MNLTPTIEGF 125
++P + GF
Sbjct: 209 --MSPVLYGF 216
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 74/80 (92%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+Q
Sbjct: 26 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 85
Query: 97 SLQRQVEFLSMKLEAVNSRM 116
SLQRQVEFLSMKL VN +
Sbjct: 86 SLQRQVEFLSMKLSTVNPEL 105
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 90/130 (69%), Gaps = 11/130 (8%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++QSL
Sbjct: 177 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 236
Query: 99 QRQVEFLSMKLEAVNSRMNL----------TPTIEGFHPKDLGEQAFDATGMIFGSQTAR 148
QRQVE+LSM+L AVN R++ I GF+ K+ G T G AR
Sbjct: 237 QRQVEYLSMRLAAVNPRVDFGGLDSFLTTECGRIAGFNCKN-GIDLEQVTWPEMGVHGAR 295
Query: 149 EYAQGSQQDW 158
+ Q QQ W
Sbjct: 296 QLMQLQQQFW 305
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 90/130 (69%), Gaps = 11/130 (8%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++QSL
Sbjct: 190 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 249
Query: 99 QRQVEFLSMKLEAVNSRMNL----------TPTIEGFHPKDLGEQAFDATGMIFGSQTAR 148
QRQVE+LSM+L AVN R++ I GF+ K+ G T G AR
Sbjct: 250 QRQVEYLSMRLAAVNPRVDFGGLDSFLTTECGRIAGFNCKN-GIDLEQVTWPEMGVHGAR 308
Query: 149 EYAQGSQQDW 158
+ Q QQ W
Sbjct: 309 QLMQLQQQFW 318
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 74/82 (90%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++LDEIINY+Q
Sbjct: 101 EDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQ 160
Query: 97 SLQRQVEFLSMKLEAVNSRMNL 118
SLQRQVEFLSMKL VN +
Sbjct: 161 SLQRQVEFLSMKLATVNPELGF 182
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 73/85 (85%), Gaps = 5/85 (5%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
YIHVRARRGQATDSHSLAER RREKISERMK LQ LVPGC+KV GKAL+LDEIINY+QSL
Sbjct: 145 YIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSL 204
Query: 99 QRQVEFLSMKLEAVNS-----RMNL 118
Q QVEFLSMKL ++N RM+L
Sbjct: 205 QNQVEFLSMKLASLNPIFFDFRMDL 229
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 63/81 (77%), Positives = 71/81 (87%)
Query: 33 SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 92
+EPPKDYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGC+KV GKA++LDEII
Sbjct: 247 AEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEII 306
Query: 93 NYIQSLQRQVEFLSMKLEAVN 113
NY+QSLQRQVE + L +
Sbjct: 307 NYVQSLQRQVEVRRVCLLCIG 327
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 73/85 (85%), Gaps = 5/85 (5%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
YIHVRARRGQATDSHSLAER RREKISERMK LQ LVPGC+KV GKAL+LDEIINY+QSL
Sbjct: 177 YIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSL 236
Query: 99 QRQVEFLSMKLEAVNS-----RMNL 118
Q QVEFLSMKL ++N RM+L
Sbjct: 237 QNQVEFLSMKLASLNPIFFDFRMDL 261
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 76/91 (83%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY HVRA+RGQAT+SHSLAER RREKI+ RMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 149 EDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQ 208
Query: 97 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 127
SLQRQVEFLSMKL A+ N ++ HP
Sbjct: 209 SLQRQVEFLSMKLSAIRPGFNRDLELQDDHP 239
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++QSL
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 260
Query: 99 QRQVEFLSMKLEAVNSRMNLT-PTIEGFHPKDLGEQAFDATGM 140
QRQVE LSM+L AVN R++ TI L + +F+A M
Sbjct: 261 QRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNAAPM 303
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++QSL
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 260
Query: 99 QRQVEFLSMKLEAVNSRMNLT-PTIEGFHPKDLGEQAFDATGM 140
QRQVE LSM+L AVN R++ TI L + +F+A M
Sbjct: 261 QRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNAAPM 303
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 79/93 (84%), Gaps = 2/93 (2%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+++IHVRARRGQAT+SHSLAER RREKISERM++LQ+LVPGC+K GKA++LDEIINY+Q
Sbjct: 226 ENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQ 285
Query: 97 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 129
SLQ+QVEFLSMKL VN ++N +E KD
Sbjct: 286 SLQQQVEFLSMKLATVNPQLNF--NVEQICSKD 316
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 77/91 (84%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
E S+ E Y+HVRARRGQATDSHSLAERARREKI++RMK+LQ+LVPGCNK+ G ALV
Sbjct: 168 EGSQQEEEKLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALV 227
Query: 88 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
LDEIIN++Q LQRQVE LSM+L AVN R++
Sbjct: 228 LDEIINHVQFLQRQVEILSMRLAAVNPRIDF 258
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 72/82 (87%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 146 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQS 205
Query: 98 LQRQVEFLSMKLEAVNSRMNLT 119
LQ+QVEFLSMK+ A N +N
Sbjct: 206 LQKQVEFLSMKIAAANPVVNFN 227
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 94/130 (72%), Gaps = 11/130 (8%)
Query: 7 KNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISE 66
K E+ ++ ++ S N E+S + P DYIHVRARRG+ATD HSLAERARREKIS+
Sbjct: 109 KAEDETEPSMKGKSNMSN--TETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISK 165
Query: 67 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFH 126
+MK LQD+VPGCNKV GKA +LDEIINY+QSLQ+QVEFLSMKL +N P +E H
Sbjct: 166 KMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVIN------PELEC-H 218
Query: 127 PKDL-GEQAF 135
DL +QA+
Sbjct: 219 IDDLSAKQAY 228
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 96/147 (65%), Gaps = 12/147 (8%)
Query: 22 AGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 81
A KPA + E P Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV
Sbjct: 138 AEEKPAAAGGEDEKPA-YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKV 196
Query: 82 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQA-FDATGM 140
G ALVLDEIIN++QSLQRQVE+LSM+L VN R + ++ F + G A F+
Sbjct: 197 SGTALVLDEIINHVQSLQRQVEYLSMRLATVNPRGDFG-GLDSFLTTECGRIASFNCKNG 255
Query: 141 I---------FGSQTAREYAQGSQQDW 158
I G AR+ Q QQ W
Sbjct: 256 IDLEQVTWPEMGVHGARQLMQLQQQFW 282
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 75/81 (92%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++QSL
Sbjct: 4 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSL 63
Query: 99 QRQVEFLSMKLEAVNSRMNLT 119
QR+VEFLSM+L AVN R++ +
Sbjct: 64 QREVEFLSMRLAAVNPRIDFS 84
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 73/81 (90%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G A+VLDEIIN++QSL
Sbjct: 203 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSL 262
Query: 99 QRQVEFLSMKLEAVNSRMNLT 119
QRQVE LSMKL AVN R++ +
Sbjct: 263 QRQVEILSMKLAAVNPRIDFS 283
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 98 LQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMI 141
LQ+QVEFLSMK+ A N ++ +E + L + A G +
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFD-IVEDLFGRQLKQACGPAAGQL 244
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 73/81 (90%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K+ G A+VLDEIIN++QSL
Sbjct: 197 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSL 256
Query: 99 QRQVEFLSMKLEAVNSRMNLT 119
QRQVE LSMKL AVN R++ +
Sbjct: 257 QRQVEILSMKLAAVNPRIDFS 277
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 98 LQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMI 141
LQ+QVEFLSMK+ A N ++ +E + L + A G +
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFD-IVEDLFGRQLKQACGPAAGQL 244
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/92 (70%), Positives = 77/92 (83%), Gaps = 2/92 (2%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVRAR QAT+SHS+AE+ RREKISERMK+LQDLVPGC+KV GKA++LDEIINY+QSL
Sbjct: 145 YVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSL 204
Query: 99 QRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
QRQVEFLSMKL VN R+ + IE KD+
Sbjct: 205 QRQVEFLSMKLSTVNPRLGV--DIELLLAKDI 234
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/96 (68%), Positives = 80/96 (83%), Gaps = 3/96 (3%)
Query: 31 KPSEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 89
K +PPK +IHVRARRGQATD HSLAERARREKIS RMK LQ LVPGC++V GKA++L+
Sbjct: 138 KKEQPPKQGFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLE 197
Query: 90 EIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
EIINY++SLQRQ+EFLSMKL AV+ R++ +EG
Sbjct: 198 EIINYVKSLQRQIEFLSMKLAAVDPRVDT--NVEGL 231
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 89/130 (68%), Gaps = 11/130 (8%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++QSL
Sbjct: 104 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 163
Query: 99 QRQVEFLSMKLEAVNSRM------NLTPT----IEGFHPKDLGEQAFDATGMIFGSQTAR 148
QRQVE+LSM+L AVN R+ N T I G + K+ G T G AR
Sbjct: 164 QRQVEYLSMRLAAVNPRVDFGGLDNFLTTECGRITGLNYKN-GMDLEQVTWPDMGVHGAR 222
Query: 149 EYAQGSQQDW 158
Q QQ W
Sbjct: 223 NLMQLQQQFW 232
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 89/130 (68%), Gaps = 11/130 (8%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++QSL
Sbjct: 143 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 202
Query: 99 QRQVEFLSMKLEAVNSRM------NLTPT----IEGFHPKDLGEQAFDATGMIFGSQTAR 148
QRQVE+LSM+L AVN R+ N T I G + K+ G T G AR
Sbjct: 203 QRQVEYLSMRLAAVNPRVDFGGLDNFLTTECGRITGLNYKN-GMDLEQVTWPDMGVHGAR 261
Query: 149 EYAQGSQQDW 158
Q QQ W
Sbjct: 262 NLMQLQQQFW 271
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 95/151 (62%), Gaps = 18/151 (11%)
Query: 18 ASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 77
AS AG E KP+ Y+HVRARRGQATDSHSLAERARREKI+ RM++L++LVPG
Sbjct: 63 ASKDAGG--GEDEKPA-----YVHVRARRGQATDSHSLAERARREKINARMELLKELVPG 115
Query: 78 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL----------TPTIEGFHP 127
C+KV G ALVLDEIIN++QSLQRQVE+LSM+L AVN R++ I G +
Sbjct: 116 CSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTSECGRITGLNC 175
Query: 128 KDLGEQAFDATGMIFGSQTAREYAQGSQQDW 158
K G T G AR Q QQ W
Sbjct: 176 KS-GMDLEQVTWPDMGVHGARHLMQLQQQFW 205
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 73/80 (91%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++Q+L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTL 241
Query: 99 QRQVEFLSMKLEAVNSRMNL 118
QRQVE LSM+L AVN R++
Sbjct: 242 QRQVEMLSMRLAAVNPRIDF 261
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 72/81 (88%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DY HVRA+RGQAT+SHSLAER RREKI+ RMK+LQDLVPGCNK+ GKA++LDEIINY+Q
Sbjct: 149 EDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQ 208
Query: 97 SLQRQVEFLSMKLEAVNSRMN 117
SLQRQVEFLSMKL A+ N
Sbjct: 209 SLQRQVEFLSMKLSAIRPGFN 229
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 71/80 (88%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC K+ G ALVLDEIIN++Q+L
Sbjct: 170 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTL 229
Query: 99 QRQVEFLSMKLEAVNSRMNL 118
QRQVE LSMKL AVN R++
Sbjct: 230 QRQVEILSMKLAAVNPRIDF 249
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 80/93 (86%), Gaps = 3/93 (3%)
Query: 34 EPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 92
+PPK +IHVRARRGQAT+SHSLAERARREKIS RMK LQ LVPGC++V GKA++L+EII
Sbjct: 10 QPPKQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEII 69
Query: 93 NYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
NY++SLQRQ+EFLSMKL AV+ R++ +EG
Sbjct: 70 NYVKSLQRQIEFLSMKLAAVDPRLD--TNVEGL 100
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 70/76 (92%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 98 LQRQVEFLSMKLEAVN 113
LQ+QVEFLSMK+ A N
Sbjct: 199 LQKQVEFLSMKIAASN 214
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 70/76 (92%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 98 LQRQVEFLSMKLEAVN 113
LQ+QVEFLSMK+ A N
Sbjct: 199 LQKQVEFLSMKIAASN 214
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 72/78 (92%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++QSL
Sbjct: 181 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 240
Query: 99 QRQVEFLSMKLEAVNSRM 116
QRQVE LSM+L AVN R+
Sbjct: 241 QRQVEMLSMRLAAVNPRV 258
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 70/76 (92%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 139 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 198
Query: 98 LQRQVEFLSMKLEAVN 113
LQ+QVEFLSMK+ A N
Sbjct: 199 LQKQVEFLSMKIAASN 214
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 70/76 (92%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 149 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 208
Query: 98 LQRQVEFLSMKLEAVN 113
LQ+QVEFLSMK+ A N
Sbjct: 209 LQKQVEFLSMKIAASN 224
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 80/108 (74%)
Query: 11 GSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKI 70
G + E++ K S Y+HVRARRGQATDSHSLAERARREKI+ RMK+
Sbjct: 2 GKRKELDKKVKGSTKMKSKSSEENGKLPYVHVRARRGQATDSHSLAERARREKINARMKL 61
Query: 71 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
L++LVPGC+K+ G ALVLDEIIN++QSLQRQVE LSM+L AVN R++
Sbjct: 62 LRELVPGCDKIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDF 109
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 91/140 (65%), Gaps = 7/140 (5%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLD+IIN++QSL
Sbjct: 189 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 248
Query: 99 QRQVEFLSMKLEAVNSRM--NLTPTI--EGFHPKDLGEQAFDATGM---IFGSQTAREYA 151
Q +VE LSMKL AVN + NL + EG P D A M I + ++Y
Sbjct: 249 QNEVEILSMKLAAVNPVIDFNLDSLLATEGVTPMDCNFPPTVAPVMWPEIPQNGNRQQYQ 308
Query: 152 QGSQQDWLHMQVGGSFERAT 171
Q Q D H + G E T
Sbjct: 309 QPWQFDAFHQPLWGREEDNT 328
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 91/140 (65%), Gaps = 7/140 (5%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLD+IIN++QSL
Sbjct: 185 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 244
Query: 99 QRQVEFLSMKLEAVNSRM--NLTPTI--EGFHPKDLGEQAFDATGM---IFGSQTAREYA 151
Q +VE LSMKL AVN + NL + EG P D A M I + ++Y
Sbjct: 245 QNEVEILSMKLAAVNPVIDFNLDSLLATEGVTPMDCNFPPTVAPVMWPEIPQNGNRQQYQ 304
Query: 152 QGSQQDWLHMQVGGSFERAT 171
Q D LH + G E T
Sbjct: 305 QPWPFDALHQPLWGREEDNT 324
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/71 (84%), Positives = 67/71 (94%)
Query: 33 SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 92
S+PP+DYIHVRAR+GQATDSHSL ER RREKISERMK+LQ+LVPGCNKV GKA +LDEII
Sbjct: 123 SKPPEDYIHVRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDEII 182
Query: 93 NYIQSLQRQVE 103
NY+QSLQRQVE
Sbjct: 183 NYVQSLQRQVE 193
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 72/80 (90%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+K+ G LVLDEIIN++Q+L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTL 241
Query: 99 QRQVEFLSMKLEAVNSRMNL 118
QRQVE LSM+L AVN R++
Sbjct: 242 QRQVEMLSMRLAAVNPRIDF 261
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 70/76 (92%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 98 LQRQVEFLSMKLEAVN 113
LQ+QVEFLSMK+ A N
Sbjct: 202 LQKQVEFLSMKIAASN 217
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 71/90 (78%)
Query: 27 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
A+ +KP EPPKDYIHVRARRGQ DSH AER RREKISE + +LQDLVP +++ GKA
Sbjct: 6 ADDTKPPEPPKDYIHVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRITGKAD 65
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
LDEIINY+QSL+RQVE L MKL +N RM
Sbjct: 66 SLDEIINYVQSLKRQVELLYMKLATINPRM 95
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/83 (73%), Positives = 71/83 (85%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
E P YIHVRA+RGQA DSHSLAER RREKISE+M +LQ LVPGC+KV GKA++LDEII+
Sbjct: 149 EAPAGYIHVRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIIS 208
Query: 94 YIQSLQRQVEFLSMKLEAVNSRM 116
Y+QSLQ QVEFLSMKL ++N M
Sbjct: 209 YVQSLQNQVEFLSMKLASLNPMM 231
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 70/78 (89%)
Query: 36 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 95
P ++HVRARRG+ATDSHSLAERARREKISERMK+LQ LVPGC+K+IGK LVLDEIINY+
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 96 QSLQRQVEFLSMKLEAVN 113
+SLQ QVEFL KL +++
Sbjct: 162 KSLQNQVEFLVGKLASIS 179
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 70/80 (87%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
Y+HVR RRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLD+IIN++QSL
Sbjct: 157 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 216
Query: 99 QRQVEFLSMKLEAVNSRMNL 118
Q +VE LSMKL AVN ++
Sbjct: 217 QHEVEILSMKLAAVNPIIDF 236
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 69/78 (88%)
Query: 36 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 95
P ++HVRARRG+ATDSHSLAERARREKISERMK LQ LVPGC+K+IGK LVLDEIINY+
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 96 QSLQRQVEFLSMKLEAVN 113
+SLQ QVEFL KL +++
Sbjct: 162 KSLQNQVEFLVGKLASIS 179
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 70/78 (89%)
Query: 36 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 95
P ++HVRARRG+ATDSHSLAERARREKISERMK+LQ LVPGC+K+IGK LVLDEIINY+
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYV 161
Query: 96 QSLQRQVEFLSMKLEAVN 113
+SLQ QVEFL KL +++
Sbjct: 162 KSLQNQVEFLVGKLASIS 179
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 69/78 (88%)
Query: 36 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 95
P ++HVRARRG+ATDSHSLAERARREKISERMK LQ LVPGC+K+IGK LVLDEIINY+
Sbjct: 36 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 95
Query: 96 QSLQRQVEFLSMKLEAVN 113
+SLQ QVEFL KL +++
Sbjct: 96 KSLQNQVEFLVGKLASIS 113
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 74/90 (82%)
Query: 25 KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 84
K +S + E PK+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G
Sbjct: 56 KRTKSKEDDEKPKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGM 115
Query: 85 ALVLDEIINYIQSLQRQVEFLSMKLEAVNS 114
A++LDEIINY+QSLQ QVEFLSMKL A ++
Sbjct: 116 AVMLDEIINYVQSLQNQVEFLSMKLTAAST 145
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 69/79 (87%)
Query: 36 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 95
PKD +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A++LDEIINY+
Sbjct: 150 PKDVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYV 209
Query: 96 QSLQRQVEFLSMKLEAVNS 114
QSLQ QVEFLSMKL A ++
Sbjct: 210 QSLQNQVEFLSMKLTAAST 228
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 91/138 (65%), Gaps = 24/138 (17%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK--VIGKALVLDEIINYIQ 96
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K + G ALVLD+IIN++Q
Sbjct: 29 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQ 88
Query: 97 SLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLG---------------EQAFDATGMI 141
SLQRQVEFLSM+L AV R++ + ++ + G EQ+ GMI
Sbjct: 89 SLQRQVEFLSMRLAAVTPRIDFS-GLDNILSSECGRLTSSNRIGMGTVAMEQSTWLDGMI 147
Query: 142 FGSQTAREYAQGSQQDWL 159
G + Q QQ WL
Sbjct: 148 NGCK------QQQQQIWL 159
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 71/78 (91%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
P ++YIHV+ARRG+A ++HSLAER RREKISERMK+LQ LVPGC+++ GK +VLDEIINY
Sbjct: 198 PKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINY 257
Query: 95 IQSLQRQVEFLSMKLEAV 112
+QSLQ+QVEFLSMKL +V
Sbjct: 258 VQSLQQQVEFLSMKLASV 275
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Query: 19 SSAAGNKPAES-SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 77
SS G + +S K E P++ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPG
Sbjct: 123 SSGRGKRAMKSIEKEDEKPREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPG 182
Query: 78 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL---TPTIE 123
C K +G A++LDEIINY+QSLQ QVEFLSMKL A + + T T+E
Sbjct: 183 CYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASQYYDFNSDTDTLE 231
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 73/88 (82%), Gaps = 8/88 (9%)
Query: 39 YIHVRARRGQATDSHSLAER--------ARREKISERMKILQDLVPGCNKVIGKALVLDE 90
Y+HVRARRGQATD+HSLAER ARREKI+ RMK+LQ+LVPGC+K+ G ALVLDE
Sbjct: 126 YVHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDE 185
Query: 91 IINYIQSLQRQVEFLSMKLEAVNSRMNL 118
IIN++Q+LQRQVE LSM+L AVN R++
Sbjct: 186 IINHVQTLQRQVEMLSMRLAAVNPRIDF 213
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 70/78 (89%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
P ++YIHV+ARRG+A ++HSLAER RREKISERMK+LQ LVPGC+++ GK +VLDEIINY
Sbjct: 198 PKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINY 257
Query: 95 IQSLQRQVEFLSMKLEAV 112
+QSLQ+QVE LSMKL +V
Sbjct: 258 VQSLQQQVELLSMKLASV 275
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 70/81 (86%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
E P++ +HVRARRGQATDSHS+AER RR KI+ER++ LQD+VPGC K +G A++LDEIIN
Sbjct: 145 EKPREVVHVRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIIN 204
Query: 94 YIQSLQRQVEFLSMKLEAVNS 114
Y+QSLQ QVEFLSMKL A +S
Sbjct: 205 YVQSLQNQVEFLSMKLTAASS 225
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 73/87 (83%)
Query: 33 SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 92
++ PKD +HVRA+RGQATDSHSLAER RREKI+ER+K LQDLVPGC K +G A++LD II
Sbjct: 95 TQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVII 154
Query: 93 NYIQSLQRQVEFLSMKLEAVNSRMNLT 119
+Y++SLQ Q+EFLSMKL A ++ +L
Sbjct: 155 DYVRSLQNQIEFLSMKLSAASACYDLN 181
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 73/87 (83%)
Query: 33 SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 92
++ PKD +HVRA+RGQATDSHSLAER RREKI+ER+K LQDLVPGC K +G A++LD II
Sbjct: 95 TQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVII 154
Query: 93 NYIQSLQRQVEFLSMKLEAVNSRMNLT 119
+Y++SLQ Q+EFLSMKL A ++ +L
Sbjct: 155 DYVRSLQNQIEFLSMKLSAASACYDLN 181
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 73/86 (84%)
Query: 33 SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 92
++ PKD +HVRA+RGQATDSHSLAER RREKI+ER+K LQDLVPGC K +G A++LD II
Sbjct: 38 TQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVII 97
Query: 93 NYIQSLQRQVEFLSMKLEAVNSRMNL 118
+Y++SLQ Q+EFLSMKL A ++ +L
Sbjct: 98 DYVRSLQNQIEFLSMKLSAASACYDL 123
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 83/115 (72%), Gaps = 8/115 (6%)
Query: 4 SGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREK 63
SGSK +N SS G + +S + P + +HVRA+RGQATDSHSLAER RR K
Sbjct: 103 SGSKTKN--------SSGRGKRVKRNSIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGK 154
Query: 64 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
I+E+++ LQ++VPGC K +G A++LDEIINY+QSLQ QVEFLSMKL A ++ +L
Sbjct: 155 INEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTYYDL 209
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 69/79 (87%)
Query: 36 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 95
P++ IHVRA+RGQATDSHSLAER RREKI+E+++ LQDLVPGC K +G A++LD IINY+
Sbjct: 134 PREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYV 193
Query: 96 QSLQRQVEFLSMKLEAVNS 114
QSLQ Q+EFLSMKL A ++
Sbjct: 194 QSLQNQIEFLSMKLSAAST 212
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 82/116 (70%), Gaps = 2/116 (1%)
Query: 9 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 68
E+GSK SS G + + + E ++ +HVRARRGQATDSHSLAER RR KI+ER+
Sbjct: 126 ESGSKKR--KSSRRGKRVKSNEEEEEKTREVVHVRARRGQATDSHSLAERVRRGKINERL 183
Query: 69 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG 124
+ LQD+VPGC K +G A++LDEIINY+QSLQ QVEFLSMKL A ++ + E
Sbjct: 184 RCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNAETEA 239
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Query: 10 NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMK 69
NG+ SS G + ++ E ++ +HVRARRGQATDSHS+AER RR KI+ER+K
Sbjct: 119 NGNSLTKNNSSRRGKR--SKNREEEKDREVVHVRARRGQATDSHSIAERVRRGKINERLK 176
Query: 70 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
LQD+VPGC K +G A +LDEIINY+QSLQ QVEFLSMKL A +S +
Sbjct: 177 CLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDF 225
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 69/79 (87%)
Query: 36 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 95
P++ IHVRA+RGQATDSHSLAER RREKI+E+++ LQDLVPGC K +G A++LD IINY+
Sbjct: 117 PREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYV 176
Query: 96 QSLQRQVEFLSMKLEAVNS 114
QSLQ Q+EFLSMKL A ++
Sbjct: 177 QSLQNQIEFLSMKLSAAST 195
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 69/79 (87%)
Query: 36 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 95
P++ IHVRA+RGQATDSHSLAER RREKI+E+++ LQDLVPGC K +G A++LD IINY+
Sbjct: 113 PREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYV 172
Query: 96 QSLQRQVEFLSMKLEAVNS 114
QSLQ Q+EFLSMKL A ++
Sbjct: 173 QSLQNQIEFLSMKLSAAST 191
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 62/67 (92%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGC KV GKA++LDEIINY+Q
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQ 60
Query: 97 SLQRQVE 103
LQRQVE
Sbjct: 61 FLQRQVE 67
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 68/78 (87%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
++ +HVRARRGQATDSHSLAER RR KI+ER++ L+D+VPGC K +G A++LDEIINY+Q
Sbjct: 143 REVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQ 202
Query: 97 SLQRQVEFLSMKLEAVNS 114
SLQ QVEFLSMKL A +S
Sbjct: 203 SLQNQVEFLSMKLAAASS 220
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
Query: 9 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 68
E+GSK ++ SS G + + E K+ +HVRARRGQATDSHSLAER RR KI+E++
Sbjct: 125 ESGSK--IKHSSGRGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKL 182
Query: 69 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 114
+ LQ++VPGC K +G A++LDEIINY+QSLQ QVEFLS+KL A ++
Sbjct: 183 RCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAAST 228
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
Query: 9 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 68
E+GSK ++ SS G + + E K+ +HVRARRGQATDSHSLAER RR KI+E++
Sbjct: 124 ESGSK--IKHSSGRGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKL 181
Query: 69 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 114
+ LQ++VPGC K +G A++LDEIINY+QSLQ QVEFLS+KL A ++
Sbjct: 182 RCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAAST 227
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 65/75 (86%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 100 RQVEFLSMKLEAVNS 114
QVEFLSMKL A +S
Sbjct: 203 NQVEFLSMKLTAASS 217
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 84/125 (67%), Gaps = 11/125 (8%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
ARRGQATDSHSLAERARREKI+ RM++L++LVPGC+KV G ALVLDEIIN++QSLQRQVE
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 104 FLSMKLEAVNSRM------NLTPT----IEGFHPKDLGEQAFDATGMIFGSQTAREYAQG 153
+LSM+L AVN R+ N T I G + K+ G T G AR Q
Sbjct: 61 YLSMRLAAVNPRVDFGGLDNFLTTECGRITGLNYKN-GMDLEQVTWPDMGVHGARNLMQL 119
Query: 154 SQQDW 158
QQ W
Sbjct: 120 QQQFW 124
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 4/121 (3%)
Query: 4 SGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREK 63
+ S NE K + S NK E K E IHVRA+RGQATDSHS+AER RREK
Sbjct: 114 TASTNETKKKNNLGGSKKGENKEKEGDKAEE----VIHVRAKRGQATDSHSIAERVRREK 169
Query: 64 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIE 123
I+ +++ LQDLVPGC++ +G A++L+EIINY+ SLQ QVEFLSM+L A +S +L E
Sbjct: 170 INNKLRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQVEFLSMELAAASSSNDLNNLTE 229
Query: 124 G 124
Sbjct: 230 S 230
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 65/78 (83%)
Query: 41 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 101 QVEFLSMKLEAVNSRMNL 118
QVEFLSMKL A +S +
Sbjct: 206 QVEFLSMKLTAASSYYDF 223
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 65/78 (83%)
Query: 41 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 101 QVEFLSMKLEAVNSRMNL 118
QVEFLSMKL A +S +
Sbjct: 206 QVEFLSMKLTAASSYYDF 223
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 65/78 (83%)
Query: 41 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 135 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 194
Query: 101 QVEFLSMKLEAVNSRMNL 118
QVEFLSMKL A +S +
Sbjct: 195 QVEFLSMKLTAASSYYDF 212
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 67/80 (83%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 1026 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1085
Query: 100 RQVEFLSMKLEAVNSRMNLT 119
QVEFLSMKL A +S + +
Sbjct: 1086 NQVEFLSMKLNAASSFYDFS 1105
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 65/75 (86%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 1037 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1096
Query: 100 RQVEFLSMKLEAVNS 114
QVEFLSMKL A +S
Sbjct: 1097 NQVEFLSMKLTAASS 1111
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Query: 25 KPAESSK--PSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 82
+PA+ K P EPP Y+HVRARRG+ATDSHSLAER RREKIS RMK+LQ LVPGC+K+
Sbjct: 142 RPAKKQKKVPVEPPTGYVHVRARRGEATDSHSLAERVRREKISSRMKLLQSLVPGCDKIT 201
Query: 83 GKALVLDEIINYIQSLQRQVE 103
GKALVLDEII+Y+Q L+ +V+
Sbjct: 202 GKALVLDEIISYVQFLKDRVQ 222
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 80/115 (69%), Gaps = 8/115 (6%)
Query: 4 SGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREK 63
SGSK +N S G + + + P + +HVRA+RGQATDSHSLAER RR K
Sbjct: 97 SGSKTKN--------SCGRGKRVKRNMIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGK 148
Query: 64 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
I+E+++ LQ++VPGC K +G A++LDEIINY+QSLQ QVEFLSMKL A ++ +
Sbjct: 149 INEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLNAASTYYDF 203
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 68/86 (79%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
+HVRARRGQATDSHSLAER RR KI+E++K LQ++VPGC K +G A++LDEIINY+QSLQ
Sbjct: 150 VHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQ 209
Query: 100 RQVEFLSMKLEAVNSRMNLTPTIEGF 125
QVEFLSMKL A ++ + I
Sbjct: 210 HQVEFLSMKLTAASTFYDFNSEINSL 235
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 62/67 (92%)
Query: 38 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LVPGC+KV GKA +LDEIINY+QS
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 98 LQRQVEF 104
LQ+QVE
Sbjct: 202 LQKQVEV 208
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 64/75 (85%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
+HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 146 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQ 205
Query: 100 RQVEFLSMKLEAVNS 114
QVE LSMKL A +S
Sbjct: 206 NQVELLSMKLTAASS 220
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 70/86 (81%), Gaps = 3/86 (3%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
K+ IHVRA+RGQATDSHS+AER RREKI+ +++ LQD+VPGC+K +G A++L+EIINY+
Sbjct: 153 KEVIHVRAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVH 212
Query: 97 SLQRQVEFLSMKLEAV---NSRMNLT 119
SLQ QVEFLSM+L A N NLT
Sbjct: 213 SLQNQVEFLSMELAAASCSNDLKNLT 238
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 67/79 (84%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
IHVRA+RGQATDSHS+AER RREKI+ +++ LQDLVPGC+K +G A++L+EIINY+ SLQ
Sbjct: 147 IHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQ 206
Query: 100 RQVEFLSMKLEAVNSRMNL 118
QVEFLSM+L A + +L
Sbjct: 207 NQVEFLSMELAAASCSYDL 225
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 66/89 (74%)
Query: 36 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 95
P + IHVRARRGQATD+HS+AER RREKI R++ LQDLVPGC K G A++LDEIINY+
Sbjct: 196 PDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEIINYV 255
Query: 96 QSLQRQVEFLSMKLEAVNSRMNLTPTIEG 124
SLQ QVEFLS +L A +S N E
Sbjct: 256 HSLQNQVEFLSRELAAASSLHNFNSETEA 284
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 66/78 (84%)
Query: 41 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
HVRARRGQATDSHSLAER RR KI+E+++ LQ++VPGC K +G A++LDEIINY+QSLQ
Sbjct: 156 HVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQH 215
Query: 101 QVEFLSMKLEAVNSRMNL 118
QVEFLS+KL A ++ +
Sbjct: 216 QVEFLSLKLTAASTYYDF 233
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATDSHSLAER RREKISERMK LQDLVPGC KV GKA++LDEIINY+QSLQRQ
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 102 VE 103
VE
Sbjct: 61 VE 62
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 69/109 (63%), Gaps = 29/109 (26%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCN----------------- 79
KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGC+
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTH 332
Query: 80 ------------KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
KV GKA++LDEIINY+QSLQ QVE + L + S +
Sbjct: 333 AYFNFQRLLDLVKVTGKAVMLDEIINYVQSLQCQVEVRAYDLHSALSAL 381
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 67/95 (70%), Gaps = 5/95 (5%)
Query: 36 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI-----GKALVLDE 90
P + IHVRARRGQATD+HS+AER RREKI R++ LQDLVPGC KV G A++LDE
Sbjct: 142 PDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVMLDE 201
Query: 91 IINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
IINY+ SLQ QVEFLS +L A +S N E
Sbjct: 202 IINYVHSLQNQVEFLSRELAAASSLHNFNSETEAI 236
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
Query: 22 AGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 81
+GN E K + +DYIHVRARRG+ATDSHSLAER RRE+ISERMK L+ LVPGCNK+
Sbjct: 132 SGNGSKE--KNEDKKQDYIHVRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKI 189
Query: 82 IGKALVLDEIINYIQSLQ 99
GKA +LDEIINY+QSLQ
Sbjct: 190 TGKAGMLDEIINYVQSLQ 207
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 66/82 (80%)
Query: 32 PSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 91
P E P Y+HVRARRG+ATDSHSLAER RRE+IS +MK+LQ LVPGC+++ GKAL+LDEI
Sbjct: 67 PLEHPTGYVHVRARRGEATDSHSLAERVRRERISAKMKLLQSLVPGCDQITGKALILDEI 126
Query: 92 INYIQSLQRQVEFLSMKLEAVN 113
I Y+QSL+ ++ L +L VN
Sbjct: 127 IRYVQSLKDRIGSLEAELVLVN 148
>gi|30695832|ref|NP_567057.2| transcription factor bHLH60 [Arabidopsis thaliana]
gi|122214701|sp|Q3EAI1.1|BH060_ARATH RecName: Full=Transcription factor bHLH60; AltName: Full=Basic
helix-loop-helix protein 60; Short=AtbHLH60; Short=bHLH
60; AltName: Full=Transcription factor EN 91; AltName:
Full=bHLH transcription factor bHLH060
gi|332646181|gb|AEE79702.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 426
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 82/150 (54%), Gaps = 48/150 (32%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK------------------ 80
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFGVHL 260
Query: 81 -----------------------------VIGKALVLDEIINYIQSLQRQVEFLSMKLEA 111
+ G ALVLDEIIN++QSLQRQVE LSM+L A
Sbjct: 261 LMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMRLAA 320
Query: 112 VNSRMNLT-PTIEGFHPKDLGEQAFDATGM 140
VN R++ TI L + +F+A M
Sbjct: 321 VNPRIDFNLDTILASENGSLMDGSFNAAPM 350
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 64/83 (77%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
P Y+HVRARRG+ATD HSLAER RR+KIS RMK+LQ LVPGC+K+ GKA +LDEII +
Sbjct: 157 PLTGYVHVRARRGEATDPHSLAERVRRKKISVRMKLLQSLVPGCDKLTGKAQILDEIIRH 216
Query: 95 IQSLQRQVEFLSMKLEAVNSRMN 117
+ SLQ QVEFL+ K + N N
Sbjct: 217 VLSLQNQVEFLAAKFTSENGIAN 239
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
Query: 9 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 68
E+G+K + SS G + + E K+ ++VRAR GQATDS +LAER RR KI+E++
Sbjct: 122 ESGNK--FKHSSGRGKRVKNNVTEEEKAKEVVNVRARSGQATDSRNLAERVRRGKINEKL 179
Query: 69 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEG 124
+ LQ++VPGC K +G A++LDEIINY+QSLQ QVEFLS+KL A ++ + I+
Sbjct: 180 RYLQNIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSLKLTAPSTFYDFNSEIDA 235
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 61/70 (87%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
E PK+ IHVRA+RGQATDSHSLAER RRE+I+E+++ LQDLVPGC K +G A++LD IIN
Sbjct: 113 EKPKEVIHVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIIN 172
Query: 94 YIQSLQRQVE 103
Y+QSLQ Q+E
Sbjct: 173 YVQSLQNQIE 182
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 63/88 (71%), Gaps = 18/88 (20%)
Query: 31 KPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 90
KP EP KDYIHVR RE+ISERMK+LQ LVPGCNK+ GKAL+LDE
Sbjct: 194 KP-EPAKDYIHVR-----------------RERISERMKLLQSLVPGCNKITGKALMLDE 235
Query: 91 IINYIQSLQRQVEFLSMKLEAVNSRMNL 118
IINY+QSLQRQVEFLSMKL +N +++
Sbjct: 236 IINYVQSLQRQVEFLSMKLATMNPQLDF 263
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 66/83 (79%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RARRGQATDSH+LAER RR KI+E+++ LQ++VPGC K + A++LDEIINY+QSLQ QV
Sbjct: 152 RARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQV 211
Query: 103 EFLSMKLEAVNSRMNLTPTIEGF 125
EFLS++L A ++ + I+ F
Sbjct: 212 EFLSLELTAASTFYDFNSEIDAF 234
>gi|125526611|gb|EAY74725.1| hypothetical protein OsI_02616 [Oryza sativa Indica Group]
Length = 467
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 71/106 (66%), Gaps = 12/106 (11%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMK--ILQDLVPGCN--------KVIG 83
EPPKDYIHVRARRGQATDSHSLAER + + + ++ + +V G
Sbjct: 266 EPPKDYIHVRARRGQATDSHSLAERVNTAGVYAAIHNFVFSSILAFADAIAAVFHLQVTG 325
Query: 84 KALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 129
KA++LDEIINY+QSLQRQVEFLSMKL VN +++ ++ F PKD
Sbjct: 326 KAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQLDF--DVDNFIPKD 369
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 62/77 (80%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 96
+D+I VRARRGQATDS S+AE R EKI +RMK LQDLVPGC KV GK +LDEIINY+Q
Sbjct: 6 QDFIRVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEIINYVQ 65
Query: 97 SLQRQVEFLSMKLEAVN 113
SLQ Q E LSMKL AV+
Sbjct: 66 SLQCQAESLSMKLGAVH 82
>gi|326521778|dbj|BAK00465.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 71/100 (71%), Gaps = 10/100 (10%)
Query: 1 MKTSGSKNENGS-KAEVEASSAAGNKPAESSKPSEPPK-DYIHVRARRGQATDSHSLAER 58
K + S ++NGS + + EA S +K + + P PPK D+IHVRARRGQATDSHSLAER
Sbjct: 79 FKANKSSDDNGSFRKDAEADSRNASKAVDQNPP--PPKQDFIHVRARRGQATDSHSLAER 136
Query: 59 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
ARREKI+ERMKILQDLVPGCNK++ L Y QS+
Sbjct: 137 ARREKITERMKILQDLVPGCNKLMRPWL------GYWQSI 170
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 59/75 (78%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
+++VRARRG+A DSHSLAER RR+KIS +MK+LQ LVPGC+K GK +LD IINYI SL
Sbjct: 133 FVYVRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINYIHSL 192
Query: 99 QRQVEFLSMKLEAVN 113
Q QV+ L +L V+
Sbjct: 193 QDQVKSLMEELALVD 207
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 72/111 (64%), Gaps = 11/111 (9%)
Query: 9 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 68
E+GSK ++ S G + E K+ +HVRARRGQATDSHSLAER RR KI+E++
Sbjct: 124 ESGSKTKL--SGGRGKRVKSYETEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKL 181
Query: 69 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
K LQ++VPGC K +G A++LDEIINY FLS+KL A ++ +
Sbjct: 182 KCLQNIVPGCYKTMGMAVMLDEIINY---------FLSLKLTAASTYYDFN 223
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 73/113 (64%), Gaps = 7/113 (6%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
PP+ +RARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDY 189
Query: 95 IQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTA 147
++ LQ QV+ LSM SR+ ++ + G ++ M+ GSQTA
Sbjct: 190 VEFLQLQVKVLSM------SRLGGAASVSSQISEAGGSHGNASSAMVGGSQTA 236
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 73/113 (64%), Gaps = 7/113 (6%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
PP+ +RARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDY 189
Query: 95 IQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTA 147
++ LQ QV+ LSM SR+ ++ + G ++ M+ GSQTA
Sbjct: 190 VKFLQLQVKVLSM------SRLGGAASVSSQISEAGGSHGNASSAMVGGSQTA 236
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 73/113 (64%), Gaps = 7/113 (6%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
PP+ +RARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDY 189
Query: 95 IQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTA 147
++ LQ QV+ LSM SR+ ++ + G ++ M+ GSQTA
Sbjct: 190 VKFLQLQVKVLSM------SRLGGAASVSSQISEAGGSHGNASSAMVGGSQTA 236
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 18 ASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 77
A+S PA S + PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP
Sbjct: 160 AASGGTAAPASSGGGAAPPR-QTRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPN 218
Query: 78 CNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 219 ANKT-DKASMLDEIIDYVKFLQLQVKVLSM 247
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 11/96 (11%)
Query: 12 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 71
S E +A+SA GN + ++KP RARRGQATD HS+AER RREKISERMK L
Sbjct: 295 SDVEPQANSAPGN--SANAKP--------RTRARRGQATDPHSIAERLRREKISERMKNL 344
Query: 72 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
QDLVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 345 QDLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 379
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y
Sbjct: 131 PPQSRTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDY 189
Query: 95 IQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTA 147
++ LQ QV+ LSM SR+ ++ + G ++ M GSQTA
Sbjct: 190 VKFLQLQVKVLSM------SRLGGAASVSSQLSEAGGSHGNASSAMAGGSQTA 236
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 66/93 (70%), Gaps = 13/93 (13%)
Query: 36 PKDYIHVRARRGQATDSHSLAE---RARREKISERMKILQDLVPGCNKVIGKALVLDEII 92
P+D + R+ + D+ SL + RRE+ISERM++LQ LVPGC+KV GKAL+LDEII
Sbjct: 56 PQD----KKRKPREEDTASLNSAHSKVRRERISERMRMLQALVPGCDKVTGKALILDEII 111
Query: 93 NYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
NY+QSLQ QVEFLSM++ + L+P + GF
Sbjct: 112 NYVQSLQNQVEFLSMRIAS------LSPVLYGF 138
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 70/106 (66%), Gaps = 14/106 (13%)
Query: 57 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
ER RRE+I ERMK LQ LVPGCNK+ GKA +L+EIINY+QSLQRQVEFLSMKL VN
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSMKLAGVN--- 59
Query: 117 NLTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQ 162
P I + +L +Q T +F + + + +A +++H+Q
Sbjct: 60 ---PEIRSYQHGNLIQQG--GTNKLFCTISIK-FA-----NYMHLQ 94
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 14 AEVEASSAAGNKP-AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 72
A+ A++A N+P A S P + VRARRGQATD HS+AER RRE+I+ERMK LQ
Sbjct: 8 AQGAATTAVMNQPQASGSNGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQ 67
Query: 73 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 68 ELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 101
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 66/94 (70%), Gaps = 9/94 (9%)
Query: 14 AEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 73
A+V+ + +GN + S+KP RARRGQATD HS+AER RREKISERMK LQD
Sbjct: 300 ADVQHKANSGNGNSASAKP--------RARARRGQATDPHSIAERLRREKISERMKNLQD 351
Query: 74 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
LVP NK K+ +LDEII+Y++ LQ QV+ LSM
Sbjct: 352 LVPNSNKA-DKSSMLDEIIDYVKFLQLQVKVLSM 384
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 69/99 (69%), Gaps = 4/99 (4%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 317 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 375
Query: 102 VEFLSM-KLEAVNSRMNLTP--TIEGFHPKDLGEQAFDA 137
V+ LSM ++ A + + L EG+H + L + DA
Sbjct: 376 VKVLSMSRVGAPGAVLPLLTESKTEGYHGQPLPQGLLDA 414
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 69/99 (69%), Gaps = 4/99 (4%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 340
Query: 102 VEFLSM-KLEAVNSRMNLTP--TIEGFHPKDLGEQAFDA 137
V+ LSM ++ A + + L EG+H + L + DA
Sbjct: 341 VKVLSMSRVGAPGAVLPLLTESKTEGYHGQPLPQGLLDA 379
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 41 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKT-DKASMLDEIIDYVKFLQL 88
Query: 101 QVEFLSM-KLEAVNSRMNLTPTIEGFH 126
QV+ LSM +L + +N P EG +
Sbjct: 89 QVKVLSMSRLGGAGALVNSDPPAEGGN 115
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP CNK +A +LDEI++
Sbjct: 50 QPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKT-DRAAMLDEIVD 108
Query: 94 YIQSLQRQVEFLSM 107
Y++ L+ QV+ LSM
Sbjct: 109 YVKFLRLQVKVLSM 122
>gi|224101643|ref|XP_002312365.1| predicted protein [Populus trichocarpa]
gi|222852185|gb|EEE89732.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 127
MK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R++L IEG
Sbjct: 1 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDL--NIEGLLA 58
Query: 128 KDLGE-QAFDATGMIFGSQTAREY 150
KD+ + A + + F + Y
Sbjct: 59 KDILQLHAVPPSSLAFSLEMPMAY 82
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 26 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
PA S P + VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA
Sbjct: 88 PATGSAGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKA 146
Query: 86 LVLDEIINYIQSLQRQVEFLSM 107
+LDEII+Y++ LQ QV+ LSM
Sbjct: 147 SMLDEIIDYVKFLQLQVKVLSM 168
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 66/92 (71%), Gaps = 4/92 (4%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 378
Query: 102 VEFLSM-KLEAVNSRMNLTP--TIEGFHPKDL 130
V+ LSM +L A + + L EG+H + L
Sbjct: 379 VKVLSMSRLGAPGAVLPLLTESQTEGYHGQPL 410
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP CNK +A +LDEI++
Sbjct: 149 QPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKT-DRAAMLDEIVD 207
Query: 94 YIQSLQRQVEFLSM 107
Y++ L+ QV+ LSM
Sbjct: 208 YVKFLRLQVKVLSM 221
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
Query: 5 GSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
GS + ++++ AS+ G A+ P PK VRARRGQATD HS+AER RRE+I
Sbjct: 100 GSGGQTQTQSQATASATTGGATAQ---PQTKPK----VRARRGQATDPHSIAERLRRERI 152
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 153 AERMKSLQELVPNGNKT-DKASMLDEIIDYVKFLQLQVKVLSM 194
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
Query: 5 GSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
GS + ++++ AS+ G A+ P PK VRARRGQATD HS+AER RRE+I
Sbjct: 100 GSGGQTQTQSQATASATTGGATAQ---PQTKPK----VRARRGQATDPHSIAERLRRERI 152
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 153 AERMKSLQELVPNGNKT-DKASMLDEIIDYVKFLQLQVKVLSM 194
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 71/103 (68%), Gaps = 8/103 (7%)
Query: 5 GSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
GS + ++++ AS+ G +++P PK VRARRGQATD HS+AER RRE+I
Sbjct: 157 GSGGQTQTQSQATASATTG---GATAQPQTKPK----VRARRGQATDPHSIAERLRRERI 209
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 210 AERMKSLQELVPNGNKT-DKASMLDEIIDYVKFLQLQVKVLSM 251
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 19 SSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 78
S +A N+ S P++P + VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP
Sbjct: 179 SVSATNQAPASGAPAQPRQ---KVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA 235
Query: 79 NKVIGKALVLDEIINYIQSLQRQVEFLSM 107
NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 236 NKT-DKASMLDEIIDYVKFLQVQVKVLSM 263
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 19 SSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 78
S +A N+ S P++P + VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP
Sbjct: 176 SVSATNQAPASGAPAQPRQ---KVRARRGQATDPHSIAERLRRERIAERMKALQELVPNA 232
Query: 79 NKVIGKALVLDEIINYIQSLQRQVEFLSM 107
NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 233 NKT-DKASMLDEIIDYVKFLQVQVKVLSM 260
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 64/103 (62%), Gaps = 11/103 (10%)
Query: 5 GSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
G +G A V +S G P + VRARRGQATD HS+AER RRE+I
Sbjct: 177 GGPAASGGTAPVTSSGGGGTAPPRQQR----------VRARRGQATDPHSIAERLRRERI 226
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 227 AERMKSLQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 268
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 64/103 (62%), Gaps = 11/103 (10%)
Query: 5 GSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
G +G A V +S G P + VRARRGQATD HS+AER RRE+I
Sbjct: 177 GGPAASGGTAPVTSSGGGGTAPPRQQR----------VRARRGQATDPHSIAERLRRERI 226
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 227 AERMKSLQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 268
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 378
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|223948547|gb|ACN28357.1| unknown [Zea mays]
Length = 188
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 7/85 (8%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 127
MK+LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL VN R+ L + F P
Sbjct: 1 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLELG-ADDSFVP 59
Query: 128 KDLGEQAFDATGMIFGSQTAREYAQ 152
+D DA M + ++ AQ
Sbjct: 60 RD------DANKMCAAATSSISMAQ 78
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII+Y++ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDYVKFLQLQ 378
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+PP VRARRGQATD HS+AER RRE+ISER+K LQ+LVP CNK +A +LDEI++
Sbjct: 133 QPPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKT-DRAAMLDEILD 191
Query: 94 YIQSLQRQVEFLSM 107
Y++ L+ QV+ LSM
Sbjct: 192 YVKFLRLQVKVLSM 205
>gi|147797633|emb|CAN71939.1| hypothetical protein VITISV_038910 [Vitis vinifera]
Length = 381
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 61/104 (58%), Gaps = 31/104 (29%)
Query: 15 EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 74
EV+ SS G P E DYIHVRA+RGQAT+SHSLAER
Sbjct: 228 EVKMSSQTGEAPKE---------DYIHVRAKRGQATNSHSLAER---------------- 262
Query: 75 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
+ GKA++LDEIINY+QSLQRQVEFLSMKL V MN+
Sbjct: 263 ------ITGKAVMLDEIINYVQSLQRQVEFLSMKLATVYPEMNV 300
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 22 AGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 81
A KP E +PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK
Sbjct: 95 AQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT 154
Query: 82 IGKALVLDEIINYIQSLQRQVEFLSM 107
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 155 -DRAAMLDEILDYVKFLRLQVKVLSM 179
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 11/94 (11%)
Query: 14 AEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 73
A+ +A+SA GN + S+KP RARRGQATD HS+AER RREKISERMK LQD
Sbjct: 301 AQNKANSANGN--SASAKP--------RARARRGQATDPHSIAERLRREKISERMKNLQD 350
Query: 74 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
LVP NK K+ +LDEII+Y++ LQ QV+ L M
Sbjct: 351 LVPNSNKA-DKSSMLDEIIDYVKFLQLQVKVLCM 383
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 22 AGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 81
A KP E +PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK
Sbjct: 96 AQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT 155
Query: 82 IGKALVLDEIINYIQSLQRQVEFLSM 107
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 156 -DRAAMLDEILDYVKFLRLQVKVLSM 180
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 25 KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 84
KP E +PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +
Sbjct: 7 KPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DR 65
Query: 85 ALVLDEIINYIQSLQRQVEFLSM 107
A +LDEI++Y++ L+ QV+ LSM
Sbjct: 66 AAMLDEILDYVKFLRLQVKVLSM 88
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 11/96 (11%)
Query: 12 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 71
S E +A+SA GN + ++KP RARRGQATD HS+AER RREKISERMK L
Sbjct: 296 SDVEPQANSAPGN--SANAKP--------RTRARRGQATDPHSIAERLRREKISERMKNL 345
Query: 72 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
Q LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 346 QVLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 11/96 (11%)
Query: 12 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 71
S E +A+SA GN + ++KP RARRGQATD HS+AER RREKISERMK L
Sbjct: 296 SDVEPQANSAPGN--SANAKP--------RTRARRGQATDPHSIAERLRREKISERMKNL 345
Query: 72 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
Q LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 346 QVLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 11/96 (11%)
Query: 12 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 71
S E +A+SA GN + ++KP RARRGQATD HS+AER RREKISERMK L
Sbjct: 296 SDVEPQANSAPGN--SANAKP--------RTRARRGQATDPHSIAERLRREKISERMKNL 345
Query: 72 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
Q LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 346 QVLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 380
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 11/96 (11%)
Query: 12 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 71
S E +A+SA GN + ++KP RARRGQATD HS+AER RREKISERMK L
Sbjct: 219 SDVEPQANSAPGN--SANAKP--------RTRARRGQATDPHSIAERLRREKISERMKNL 268
Query: 72 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
Q LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 269 QVLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 303
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 26 PAESSKPSEPPKDYIH--VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 83
P S+ + P + IH VRARRGQATD HS+AER RRE+ISER+K LQ+LVP CNK
Sbjct: 116 PTSSTTVTIPHQPAIHPRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNKTDR 175
Query: 84 KALVLDEIINYIQSLQRQVEFLSM 107
ALV DEI++Y++ L+ QV+ LSM
Sbjct: 176 AALV-DEILDYVKFLRLQVKVLSM 198
>gi|147818198|emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
Length = 484
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 63/102 (61%), Gaps = 24/102 (23%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
SS P ++YIHVRARRGQAT+SHSLAER + GKA++L
Sbjct: 252 SSNGEAPKENYIHVRARRGQATNSHSLAER----------------------ITGKAVML 289
Query: 89 DEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
DEIINY+QSLQ+QVEFLSMKL VN +N+ IE KD+
Sbjct: 290 DEIINYVQSLQQQVEFLSMKLATVNPELNI--DIERLLSKDI 329
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
PP VRARRGQATD HS+AER RRE+ISER+K LQ+LVP CNK +A +LDEI++Y
Sbjct: 135 PPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKT-DRAAMLDEILDY 193
Query: 95 IQSLQRQVEFLSM 107
++ L+ QV+ LSM
Sbjct: 194 VKFLRLQVKVLSM 206
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 10/91 (10%)
Query: 17 EASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 76
+AS + G PA+ + VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP
Sbjct: 240 QASGSTGGAPAQPRQ---------RVRARRGQATDPHSIAERLRRERIAERMKALQELVP 290
Query: 77 GCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 291 NANKT-DKASMLDEIIDYVKFLQLQVKVLSM 320
>gi|3540186|gb|AAC34336.1| Hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 66/104 (63%), Gaps = 25/104 (24%)
Query: 28 ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
ESS+ E PK +YIH+RARRGQAT+SHSLAER + GKA+
Sbjct: 191 ESSQSEEAPKENYIHMRARRGQATNSHSLAER----------------------ITGKAV 228
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
+LDEIINY+QSLQ+QVEFLSMKL VN +N+ I+ KDL
Sbjct: 229 MLDEIINYVQSLQQQVEFLSMKLATVNPEINI--DIDRILAKDL 270
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 6/90 (6%)
Query: 18 ASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 77
AS +AG +++P + VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP
Sbjct: 228 ASGSAGGGTTPAAQPKQ-----QRVRARRGQATDPHSIAERLRRERIAERMKALQELVPN 282
Query: 78 CNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 283 ANKT-DKASMLDEIIDYVKFLQLQVKVLSM 311
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 5/91 (5%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKT-DKASMLDEIIDYVKFLQVQ 202
Query: 102 VEFLSM-KLEAVNSRMNLTPTIEGFHPKDLG 131
V+ LSM +L + + P + P+D G
Sbjct: 203 VKVLSMSRLGGAGA---VAPLVANMSPEDNG 230
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 19 SSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 78
S A PA S + P+ VRARRGQATD HS+AER RREKI+ERMK LQ+LVP
Sbjct: 332 SQTASTAPAASCNGTGKPR----VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNS 387
Query: 79 NKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+KV KA +LDEII Y++ LQ QV+ LSM
Sbjct: 388 SKV-DKASMLDEIIEYVKFLQLQVKVLSM 415
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 136 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 194
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 195 VKVLSM 200
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 26 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
P S S+PP VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A
Sbjct: 147 PGVVSAASQPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANKT-DRA 205
Query: 86 LVLDEIINYIQSLQRQVEFLSM 107
++DEI++Y++ L+ QV+ LSM
Sbjct: 206 AMIDEIVDYVKFLRLQVKVLSM 227
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 174 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 232
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 233 VKVLSM 238
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 225 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 283
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 284 VKVLSM 289
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 253 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 311
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 312 VKVLSM 317
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 41 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKT-DKASMLDEIIDYVKFLQL 89
Query: 101 QVEFLSM 107
QV+ LSM
Sbjct: 90 QVKVLSM 96
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 67/96 (69%), Gaps = 11/96 (11%)
Query: 12 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 71
S + +A+SA GN + S+KP RARRGQATD HS+AER RREKISERMK L
Sbjct: 301 SDVQPQANSAHGN--SVSAKPRS--------RARRGQATDPHSIAERLRREKISERMKNL 350
Query: 72 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
Q+LVP NK K+ +LDEII+Y++ LQ QV+ LSM
Sbjct: 351 QELVPNSNKA-DKSSMLDEIIDYVKFLQLQVKVLSM 385
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 197 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 255
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 256 VKVLSM 261
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 66/105 (62%), Gaps = 12/105 (11%)
Query: 3 TSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARRE 62
+ G N V A+ AAGN + KP VRARRGQATD HS+AER RRE
Sbjct: 270 SGGGTGLNAPPFMVPANGAAGNG---APKP--------RVRARRGQATDPHSIAERLRRE 318
Query: 63 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
KIS+RMK LQ+LVP N+ KA +LDEII Y++ LQ QV+ LSM
Sbjct: 319 KISDRMKNLQELVPNSNRT-DKASMLDEIIEYVKFLQLQVKVLSM 362
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 26 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
PA S P + VRARRGQAT HS+AER RRE+I+ERMK LQ+LVP NK KA
Sbjct: 244 PATGSAGGAPAQPRQRVRARRGQATHPHSIAERLRRERIAERMKALQELVPNANKT-DKA 302
Query: 86 LVLDEIINYIQSLQRQVEFLSM 107
+LDEII+Y++ LQ QV+ LSM
Sbjct: 303 SMLDEIIDYVKFLQLQVKVLSM 324
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 204 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 262
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 263 VKVLSM 268
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RREKIS+RMK LQDLVP NK KA +LDEII++++ LQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKA-DKASMLDEIIDHVKFLQLQ 378
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 41 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
VRARRGQATD HS+AER RRE+I+ERMK LQDLVP NK KA +LDEI++Y++ LQ
Sbjct: 3 RVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANKT-DKASMLDEIVDYVKFLQL 61
Query: 101 QVEFLSM 107
QV+ LSM
Sbjct: 62 QVKVLSM 68
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RREKIS+RMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKT-NKASMLDEIIDYVKFLQLQ 372
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 373 VKVLSM 378
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RREKIS+RMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKT-NKASMLDEIIDYVKFLQLQ 372
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 373 VKVLSM 378
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEI++Y
Sbjct: 235 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIVDY 291
Query: 95 IQSLQRQVEFLSM 107
++ LQ QV+ LSM
Sbjct: 292 VKFLQLQVKVLSM 304
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEI++Y
Sbjct: 234 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIVDY 290
Query: 95 IQSLQRQVEFLSM 107
++ LQ QV+ LSM
Sbjct: 291 VKFLQLQVKVLSM 303
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A++LDEI++
Sbjct: 114 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAVMLDEILD 172
Query: 94 YIQSLQRQVEFLSM 107
Y++ L+ QV+ LSM
Sbjct: 173 YVKFLRLQVKVLSM 186
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Query: 36 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 95
P+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y+
Sbjct: 122 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASMLDEIIDYV 180
Query: 96 QSLQRQVEFLSM 107
+ LQ QV+ LSM
Sbjct: 181 KFLQLQVKVLSM 192
>gi|414886199|tpg|DAA62213.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 162
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
MK LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMKL VN +++ +
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFS 52
>gi|414886200|tpg|DAA62214.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 161
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
MK LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMKL VN +++ +
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFS 52
>gi|414886198|tpg|DAA62212.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 172
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
MK LQDLVPGCNKV+GKAL+LDEIINY+QSLQ+QVEFLSMKL VN +++ +
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFS 52
>gi|293336149|ref|NP_001169231.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975699|gb|ACN32037.1| unknown [Zea mays]
gi|414885895|tpg|DAA61909.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 332
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/45 (88%), Positives = 44/45 (97%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 81
+DYIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+KV
Sbjct: 248 EDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKV 292
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 217 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 275
Query: 102 VEFLSM 107
V+ LS+
Sbjct: 276 VKVLSV 281
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +LDEI++
Sbjct: 116 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILD 174
Query: 94 YIQSLQRQVEFLSM 107
Y++ L+ QV+ LSM
Sbjct: 175 YVKFLRLQVKVLSM 188
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+PP VRARRGQATD HS+AER RR +I+ER+K LQ+LVP CNK +A +LDEI++
Sbjct: 12 QPPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKT-DRAAMLDEIVD 70
Query: 94 YIQSLQRQVEFLSM 107
Y++ L+ QV+ LSM
Sbjct: 71 YVKFLRLQVKVLSM 84
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
PP VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A +LDEI++Y
Sbjct: 162 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKT-DRAAMLDEIVDY 220
Query: 95 IQSLQRQVEFLSM 107
++ L+ QV+ LSM
Sbjct: 221 VKFLRLQVKVLSM 233
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 58/80 (72%), Gaps = 5/80 (6%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKT-DKASMLDEIIEYVRFLQLQ 157
Query: 102 VEFLSMK----LEAVNSRMN 117
V+ LSM AV R+N
Sbjct: 158 VKVLSMSRLGGAGAVGPRLN 177
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 296 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIEYVKFLQLQ 354
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 355 VKVLSM 360
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
PP VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A +LDEI++Y
Sbjct: 92 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKT-DRAAMLDEIVDY 150
Query: 95 IQSLQRQVEFLSM 107
++ L+ QV+ LSM
Sbjct: 151 VKFLRLQVKVLSM 163
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 26 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
P + PP VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A
Sbjct: 135 PVPITAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKT-DRA 193
Query: 86 LVLDEIINYIQSLQRQVEFLSM 107
+LDEI++Y++ L+ QV+ LSM
Sbjct: 194 AMLDEIVDYVKFLRLQVKVLSM 215
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 26 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
PA ++ PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A
Sbjct: 164 PASNAHMQHPPGIRPRVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKS-DRA 222
Query: 86 LVLDEIINYIQSLQRQVEFLSM 107
+LDEI++Y++ L+ QV+ LSM
Sbjct: 223 AMLDEIVDYVKFLRLQVKVLSM 244
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 30 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIGYVKFLQLQ 88
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 89 VKVLSM 94
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 26 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
P + PP VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A
Sbjct: 159 PVPITAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKT-DRA 217
Query: 86 LVLDEIINYIQSLQRQVEFLSM 107
+LDEI++Y++ L+ QV+ LSM
Sbjct: 218 AMLDEIVDYVKFLRLQVKVLSM 239
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 149 VRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKT-DKASMLDEIIEYVKFLQLQ 207
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 208 VKVLSM 213
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRG ATD HS+AER RREKI+ERMK LQ+LVP NKV KA +LDEII Y++ LQ Q
Sbjct: 240 VRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNKV-DKASMLDEIIEYVKFLQLQ 298
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 299 VKVLSM 304
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +LDEI++
Sbjct: 125 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILD 183
Query: 94 YIQSLQRQVEFLSM 107
Y++ L+ QV+ LSM
Sbjct: 184 YVKFLRLQVKVLSM 197
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +LDEI++
Sbjct: 125 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILD 183
Query: 94 YIQSLQRQVEFLSM 107
Y++ L+ QV+ LSM
Sbjct: 184 YVKFLRLQVKVLSM 197
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKT-DKASMLDEIIEYVRFLQLQ 157
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 158 VKVLSM 163
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+PP VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A +LDEI++
Sbjct: 161 QPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKT-DRAAMLDEIVD 219
Query: 94 YIQSLQRQVEFLSM 107
Y++ L+ QV+ LSM
Sbjct: 220 YVKFLRLQVKVLSM 233
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+PP VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK +A +LDEI++
Sbjct: 158 QPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKT-DRAAMLDEIVD 216
Query: 94 YIQSLQRQVEFLSM 107
Y++ L+ QV+ LSM
Sbjct: 217 YVKFLRLQVKVLSM 230
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+PP VRARRGQATD HS+AER RR +I+ER+K LQ+LVP CNK +A +LDEI++
Sbjct: 8 QPPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKT-DRAAMLDEIVD 66
Query: 94 YIQSLQRQVEFLSM 107
Y++ L+ Q++ LSM
Sbjct: 67 YVKFLRLQIKVLSM 80
>gi|388493796|gb|AFK34964.1| unknown [Lotus japonicus]
gi|388513685|gb|AFK44904.1| unknown [Lotus japonicus]
Length = 180
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 56/76 (73%), Gaps = 5/76 (6%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 127
MK LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++ I+
Sbjct: 1 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF--NIDELFV 58
Query: 128 KDL---GEQAFDATGM 140
K++ Q+F + GM
Sbjct: 59 KEVFPACAQSFPSIGM 74
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Query: 31 KPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 90
+P +PP RARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +LDE
Sbjct: 115 QPHQPPAPRPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDE 173
Query: 91 IINYIQSLQRQVEFLSM 107
I++Y++ L+ QV+ LSM
Sbjct: 174 ILDYVKFLRLQVKVLSM 190
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 26 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI--- 82
PA S P + VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NKVI
Sbjct: 269 PATGSAGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPT 328
Query: 83 --GKALVLDEIINYIQSLQRQ 101
KA +LDEII+Y++ LQ Q
Sbjct: 329 LTDKASMLDEIIDYVKFLQLQ 349
>gi|116309555|emb|CAH66617.1| OSIGBa0144C23.3 [Oryza sativa Indica Group]
Length = 157
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 45/51 (88%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
MK+LQ LVPGCNK+ GKAL+LDEIINY+QSLQRQVEFLSMKL +N +++
Sbjct: 1 MKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDF 51
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ERM+ LQDLVP NK +A +LDEI++Y++ L+ Q
Sbjct: 181 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKT-DRAAMLDEILDYVKFLRLQ 239
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 240 VKVLSM 245
>gi|413951547|gb|AFW84196.1| putative HLH DNA-binding domain superfamily protein, partial [Zea
mays]
Length = 236
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 48/60 (80%)
Query: 71 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
LQDLVPGCNKV+GKA++LDEIINY+QSLQRQVEFLSMKL VN +++ PKD+
Sbjct: 121 LQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKDV 180
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ERM+ LQDLVP NK +A +LDEI++Y++ L+ Q
Sbjct: 132 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKT-DRAAMLDEILDYVKFLRLQ 190
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 191 VKVLSM 196
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+PP VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +LDEI++
Sbjct: 125 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILD 183
Query: 94 YIQSLQRQVEFLSM 107
Y++ L+ QV+ LS+
Sbjct: 184 YVKFLRLQVKVLSI 197
>gi|297728315|ref|NP_001176521.1| Os11g0442650 [Oryza sativa Japonica Group]
gi|255680061|dbj|BAH95249.1| Os11g0442650 [Oryza sativa Japonica Group]
Length = 461
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 47/80 (58%), Gaps = 32/80 (40%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAER--------------------------------ARR 61
EPPKDYIHVRARRGQATDSHSLAER RR
Sbjct: 270 EPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRR 329
Query: 62 EKISERMKILQDLVPGCNKV 81
EKISERMK+LQDLVPGCNKV
Sbjct: 330 EKISERMKLLQDLVPGCNKV 349
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA+RGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTD-KASMLDEIIDYVKFLQLQV 254
Query: 103 EFLSM 107
+ LSM
Sbjct: 255 KVLSM 259
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA+RGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQV 247
Query: 103 EFLSM 107
+ LSM
Sbjct: 248 KVLSM 252
>gi|224077848|ref|XP_002305434.1| predicted protein [Populus trichocarpa]
gi|222848398|gb|EEE85945.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 44/51 (86%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
MK LQDLVPGCN + GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++
Sbjct: 1 MKYLQDLVPGCNNITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDF 51
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA+RGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANKT-DKASMLDEIIDYVRFLQLQV 253
Query: 103 EFLSM 107
+ LSM
Sbjct: 254 KVLSM 258
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 69/104 (66%), Gaps = 13/104 (12%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RREKIS+RMK LQ+LVP NK KA +L+EII YI+ LQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNKT-DKASMLEEIIEYIKFLQLQ 340
Query: 102 VEFLSM-KLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGS 144
+ LSM +L A ++ L P + H +++G++ GS
Sbjct: 341 TKVLSMSRLGATDA---LVPLLMDSH--------NESSGLVMGS 373
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 47/55 (85%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 82
+SS ++Y+H+RA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGCNKV
Sbjct: 124 DSSDGDGTKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKVT 178
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 53/64 (82%), Gaps = 2/64 (3%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI--GKALVLDEIINYIQSLQ 99
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK++ KA +LDEII+Y++ LQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 100 RQVE 103
QV+
Sbjct: 310 LQVK 313
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 65/106 (61%), Gaps = 12/106 (11%)
Query: 3 TSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARRE 62
+ G N V A+ AAGN + KP VRARRGQATD HS+AER RRE
Sbjct: 270 SGGGTGLNAPPFMVPANGAAGNG---APKP--------RVRARRGQATDPHSIAERLRRE 318
Query: 63 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
KIS+RMK LQ+LVP N+ KA +LDEII Y++ LQ QV+ S +
Sbjct: 319 KISDRMKNLQELVPNSNRT-DKASMLDEIIEYVKFLQLQVKVRSPR 363
>gi|414865639|tpg|DAA44196.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 201
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 43/44 (97%)
Query: 37 KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 80
+DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQDLVPGCNK
Sbjct: 149 EDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNK 192
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 159 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 217
Query: 102 VE 103
V+
Sbjct: 218 VK 219
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 3/66 (4%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQ 308
Query: 102 VEFLSM 107
V LSM
Sbjct: 309 V--LSM 312
>gi|79324891|ref|NP_001031530.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|330255009|gb|AEC10103.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 233
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 42/43 (97%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 81
Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+KV
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKV 224
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 52/64 (81%), Gaps = 2/64 (3%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI--GKALVLDEIINYIQSLQ 99
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK + KA +LDEII+Y++ LQ
Sbjct: 238 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQ 297
Query: 100 RQVE 103
QV+
Sbjct: 298 LQVK 301
>gi|297820582|ref|XP_002878174.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324012|gb|EFH54433.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 41/42 (97%)
Query: 39 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 80
Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDK 242
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 83 GKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT-PTIEGFHPKDLGEQAFDATGM 140
G ALVLDEIIN++QSLQRQVE LSM+L AVN R++ TI L + +F+ T M
Sbjct: 305 GTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNGTPM 363
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LV NK KA +LDEII+Y
Sbjct: 112 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKT-DKASMLDEIIDY 168
Query: 95 IQSLQRQVEFLSMKLEAVNSR 115
++ LQ QV +S A SR
Sbjct: 169 VKFLQLQVLSMSRLGGAARSR 189
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
PP+ VRARRGQATD HS+AER RRE+I+ERMK LQ+LV NK KA +LDEII+Y
Sbjct: 140 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKT-DKASMLDEIIDY 196
Query: 95 IQSLQRQVEFLSMKLEAVNSR 115
++ LQ QV +S A SR
Sbjct: 197 VKFLQLQVLSMSRLGGAARSR 217
>gi|226493556|ref|NP_001141213.1| uncharacterized protein LOC100273300 [Zea mays]
gi|194703300|gb|ACF85734.1| unknown [Zea mays]
gi|223946721|gb|ACN27444.1| unknown [Zea mays]
Length = 154
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 11/101 (10%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL--------- 118
M++L++LVPGC+KV G ALVLDEIIN++QSLQRQVE+LSM+L AVN R++
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDSFLTT 60
Query: 119 -TPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDW 158
I GF+ K+ G T G AR+ Q QQ W
Sbjct: 61 ECGRIAGFNCKN-GIDLEQVTWPEMGVHGARQLMQLQQQFW 100
>gi|255637743|gb|ACU19194.1| unknown [Glycine max]
Length = 156
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 113
MK LQ LVPGC+KV GKALVLDEIINY+QSLQ QVEFLSMKL VN
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVN 46
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 47 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
GQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LS
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANKTD-KASMLDEIIDYVKFLQLQVKVLS 227
Query: 107 M 107
M
Sbjct: 228 M 228
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 375
Query: 104 FLSMKLEAVNSRMNLTPTIEGFHPKDLGE 132
+SM M L P + H +G+
Sbjct: 376 IMSMGAGMYMPSMMLPPGMPHMHAAHMGQ 404
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 375
Query: 104 FLSMKLEAVNSRMNLTPTIEGFHPKDLGE 132
+SM M L P + H +G+
Sbjct: 376 IMSMGAGMYMPSMMLPPGMPHMHAAHMGQ 404
>gi|356527670|ref|XP_003532431.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 156
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 40/46 (86%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 113
MK LQ LVPGC+KV GKALVLDEIINY+QSLQ QVEFLSMKL VN
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVN 46
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 375
Query: 104 FLSMKLEAVNSRMNLTPTIEGFHPKDLGE 132
+SM M L P + H +G+
Sbjct: 376 IMSMGAGMYMPSMMLPPGMPHMHAAHMGQ 404
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 375
Query: 104 FLSMKLEAVNSRMNLTPTIEGFHPKDLGE 132
+SM M L P + H +G+
Sbjct: 376 IMSMGAGMYMPSMMLPPGMPHMHAAHMGQ 404
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 375
Query: 104 FLSMKLEAVNSRMNLTPTIEGFHPKDLGE 132
+SM M L P + H +G+
Sbjct: 376 IMSMGAGIYMPSMMLPPGMPHMHAAHMGQ 404
>gi|51090923|dbj|BAD35528.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|51090957|dbj|BAD35560.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|215678579|dbj|BAG92234.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 154
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 61/101 (60%), Gaps = 11/101 (10%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM------NLTPT 121
M++L++LVPGC+KV G ALVLDEIIN++QSLQRQVE+LSM+L AVN R+ N T
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDNFLTT 60
Query: 122 ----IEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDW 158
I G + K+ G T G AR Q QQ W
Sbjct: 61 ECGRITGLNYKN-GMDLEQVTWPDMGVHGARNLMQLQQQFW 100
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA RGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQV 298
Query: 103 EFLS 106
+S
Sbjct: 299 LSMS 302
>gi|242096368|ref|XP_002438674.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
gi|241916897|gb|EER90041.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
Length = 154
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 46/51 (90%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
M++L++LVPGC+KV G ALVLDEIIN++QSLQRQVE+LSM+L AVN R++
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDF 51
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 47 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
GQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNKT-DKASMLDEIIDYVKFLQLQVKVLS 322
Query: 107 M 107
M
Sbjct: 323 M 323
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 47 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
GQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNKT-DKASMLDEIIDYVKFLQLQVKVLS 322
Query: 107 M 107
M
Sbjct: 323 M 323
>gi|449440508|ref|XP_004138026.1| PREDICTED: uncharacterized protein LOC101208544 [Cucumis sativus]
gi|449501436|ref|XP_004161366.1| PREDICTED: uncharacterized LOC101208544 [Cucumis sativus]
Length = 135
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 44/50 (88%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 117
MK+LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSMKL +++ ++
Sbjct: 1 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLH 50
>gi|195643094|gb|ACG41015.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 151
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 46/58 (79%), Gaps = 6/58 (10%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
M++LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ + ++P + GF
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS------MSPVLYGF 52
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
+ RA+RG AT S+AER RR KISERMK LQDLVP +K + +LDE + Y++SLQ
Sbjct: 381 MRTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQ 440
Query: 100 RQVEFLS---MKLEA 111
RQV+ LS ++LEA
Sbjct: 441 RQVQELSDTVVRLEA 455
>gi|115477539|ref|NP_001062365.1| Os08g0536800 [Oryza sativa Japonica Group]
gi|38175541|dbj|BAD01234.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|45736094|dbj|BAD13119.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|113624334|dbj|BAF24279.1| Os08g0536800 [Oryza sativa Japonica Group]
Length = 143
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 46/58 (79%), Gaps = 6/58 (10%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 125
M++LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ + ++P + GF
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIAS------MSPVLYGF 52
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 453 SKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 511
Query: 104 FLSMKLEAVNSRMNLTPTIEGFHPKDLGE 132
+SM M L P + H +G+
Sbjct: 512 IMSMGAGLYMPSMMLPPGMPHMHAAHMGQ 540
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 461 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 519
Query: 104 FLSMKLEAVNSRMNLTPTIEGFH 126
+SM M L P + H
Sbjct: 520 IMSMGAGLYMPSMMLPPGVPHMH 542
>gi|307136009|gb|ADN33865.1| bHLH transcription factor [Cucumis melo subsp. melo]
Length = 135
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
MK+LQ LVPGC+KV GKA +LDEIINY+QSLQ QVEFLSMKL +++ +
Sbjct: 1 MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASLHPVL 49
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 52/63 (82%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R ++++ H+L+ER RR++I+E+M+ LQ+LVP CNK + KA +L+E+I Y++SLQ QV+
Sbjct: 217 KRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQA 276
Query: 105 LSM 107
+SM
Sbjct: 277 MSM 279
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
+ RA+RG AT S+AER RR KISERMK LQDLVP +K + +LDE + Y++SLQ
Sbjct: 30 MRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQ 89
Query: 100 RQVEFLS 106
R+V+ LS
Sbjct: 90 RKVQELS 96
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 443 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 501
Query: 104 FLSMKLEAVNSRMNLTPTIEGFHPKDLG 131
+SM M L ++ H +G
Sbjct: 502 IMSMGTGLCMPPMMLPTGMQHIHAAHMG 529
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQDLVP +K + +LD ++YI+ LQRQ
Sbjct: 339 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 398
Query: 102 VEFLS 106
VE LS
Sbjct: 399 VETLS 403
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 322 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 380
Query: 104 FLSMKLEAVNSRMNLTPTIEGFHPKDLG 131
+SM M L ++ H +G
Sbjct: 381 IMSMGTGLCMPPMMLPTGMQHIHAAHMG 408
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Query: 49 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
ATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 220 ATDPHSIAERLRRERIAERMKSLQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 277
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 516
Query: 104 FLSMKLEAVNSRMNLTPTIEGFHPKDLG 131
+SM M L ++ H +G
Sbjct: 517 IMSMGTGLCMPPMMLPTGMQHIHAAHMG 544
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD ++YI+ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 392
Query: 102 VEFLS 106
V+ LS
Sbjct: 393 VQTLS 397
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 380 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQ 438
Query: 104 FLSMKLEAVNSRMNLTPTIE 123
+SM M L P ++
Sbjct: 439 MMSMGSGLCIPPMLLPPAMQ 458
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 362
Query: 104 FLSMKLEAVNSRMNLTPTIEGFHPK 128
+SM V + P ++ + P+
Sbjct: 363 MMSMGCSMVPM---MYPGVQQYMPQ 384
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 324
Query: 104 FLSMKLEAVNSRMNLTPTIEGFHPK 128
+SM V + P ++ + P+
Sbjct: 325 MMSMGCSMVPM---MYPGVQQYMPQ 346
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD + YI+ LQ Q
Sbjct: 337 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 396
Query: 102 VEFLS 106
VE LS
Sbjct: 397 VEALS 401
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 177 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQ 235
Query: 104 FLSMKLEAVNSRMNLTPTIE 123
+SM M L P ++
Sbjct: 236 MMSMGSGLCIPPMLLPPAMQ 255
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 431 SKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 489
Query: 104 FLSM 107
+SM
Sbjct: 490 IMSM 493
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 367 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 425
Query: 104 FLSM 107
+SM
Sbjct: 426 IMSM 429
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD ++YI+ LQ+Q
Sbjct: 330 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 389
Query: 102 VEFLS 106
V+ LS
Sbjct: 390 VQTLS 394
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 522
Query: 104 FLSMKLEAVNSRMNLTPTIEGFH 126
+SM +M L ++ H
Sbjct: 523 MMSMGAGLYMPQMMLPAGMQHMH 545
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
Query: 41 HVR---ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
H R ++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++
Sbjct: 445 HARGMGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKT 503
Query: 98 LQRQVEFLSM 107
LQ QV+ +SM
Sbjct: 504 LQLQVQMMSM 513
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQ 516
Query: 104 FLSM 107
+SM
Sbjct: 517 IMSM 520
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD + YI+ LQ Q
Sbjct: 340 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 399
Query: 102 VEFLS 106
V+ LS
Sbjct: 400 VQTLS 404
>gi|357504213|ref|XP_003622395.1| BHLH transcription factor [Medicago truncatula]
gi|355497410|gb|AES78613.1| BHLH transcription factor [Medicago truncatula]
Length = 141
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 6/76 (7%)
Query: 60 RREKISERMKILQDLVPGCNK-VIGKALVLDEIINYIQSLQRQVEF----LSMKL-EAVN 113
RREKISER+K+L+DLVP K VIGK L+L EIINYIQSLQ QVE S+ L E +N
Sbjct: 60 RREKISERIKMLEDLVPRYTKLVIGKTLMLYEIINYIQSLQHQVEIHAYVFSIFLHERIN 119
Query: 114 SRMNLTPTIEGFHPKD 129
+N+ +I+ F KD
Sbjct: 120 FILNMHSSIDCFPSKD 135
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 14 AEVEASSAAGNKP-AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 72
A+ A++A N+P A S P + VRARRGQATD HS+AER RRE+I+ERMK LQ
Sbjct: 212 AQGAATTAVMNQPQASGSNGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQ 271
Query: 73 DLVPGCNKV 81
+LVP NKV
Sbjct: 272 ELVPNANKV 280
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISERM+ LQDLVP +K + +LD + YI+ LQ Q
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 414
Query: 102 VEFLS 106
VE LS
Sbjct: 415 VETLS 419
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQM 268
Query: 105 LSM 107
+SM
Sbjct: 269 MSM 271
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 12/93 (12%)
Query: 15 EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 74
+ E SA NKPA+ S RR +A + H+L+ER RR++I+E+M+ LQ+L
Sbjct: 12 DAELDSAVANKPAKRSG-----------STRRSRAAEVHNLSERRRRDRINEKMRALQEL 60
Query: 75 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+P CNK KA +LDE I Y++SLQ Q++ + M
Sbjct: 61 IPHCNKT-DKASMLDEAIEYLKSLQLQLQVMWM 92
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQM 268
Query: 105 LSM 107
+SM
Sbjct: 269 MSM 271
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQ 338
Query: 104 FLSM 107
+SM
Sbjct: 339 MMSM 342
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQ 338
Query: 104 FLSM 107
+SM
Sbjct: 339 MMSM 342
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 460
Query: 105 LSMKLEAVNSRMNLTPTIE 123
+SM M L P ++
Sbjct: 461 MSMGTGLCIPPMLLPPAMQ 479
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 397
Query: 104 FLSM 107
+SM
Sbjct: 398 IMSM 401
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 61/93 (65%), Gaps = 9/93 (9%)
Query: 15 EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 74
+VE S G K A S+ + ++R ++ + H+L+ER RR++I+E+M+ LQ+L
Sbjct: 316 DVEEESGDGRKEAGPSR--------TGLGSKRSRSAEVHNLSERRRRDRINEKMRALQEL 367
Query: 75 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+P CNKV KA +LDE I Y++SLQ QV+ +SM
Sbjct: 368 IPNCNKV-DKASMLDEAIEYLKSLQLQVQIMSM 399
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 289 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQ 347
Query: 104 FLSM 107
+SM
Sbjct: 348 VMSM 351
>gi|339716186|gb|AEJ88332.1| putative MYC protein, partial [Tamarix hispida]
Length = 181
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
Query: 1 MKTSGSKNENGSKAEVEASSAAGNKPAESSK-PSEPPKDYIHVRARRGQATDSHSLAERA 59
+K+SG +EN ++V+A G + +++K P +P KDYIHVRARRGQATDSHSLAERA
Sbjct: 119 LKSSGPNDEN-QNSKVDAELGTGKETMQNTKSPPDPSKDYIHVRARRGQATDSHSLAERA 177
Query: 60 RREK 63
RREK
Sbjct: 178 RREK 181
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 260 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQM 318
Query: 105 LSM 107
+SM
Sbjct: 319 MSM 321
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I+Y++SLQ QV+
Sbjct: 305 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAISYLKSLQLQVQM 363
Query: 105 LSM 107
+SM
Sbjct: 364 MSM 366
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Query: 25 KPAESSKPS--EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 82
+P ++ PS PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 104 QPMPTTVPSAPHPPPMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT- 162
Query: 83 GKALVLDEIINYIQSLQRQVEFLSM 107
+A++LDEI++Y++ L+ QV+ LSM
Sbjct: 163 DRAVMLDEIVDYVKFLRLQVKVLSM 187
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
ARR +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y+++LQ QV+
Sbjct: 262 ARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKTLQMQVQ 320
Query: 104 FLSM 107
+ M
Sbjct: 321 MMWM 324
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 367
Query: 105 LSM 107
+SM
Sbjct: 368 MSM 370
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+R A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 272 TKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 330
Query: 104 FLSM 107
+SM
Sbjct: 331 MMSM 334
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y++SLQ QV+
Sbjct: 339 SKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 397
Query: 104 FLSM 107
+SM
Sbjct: 398 IMSM 401
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 41 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
H RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 223 HGPKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDETIEYLKSLQM 281
Query: 101 QVEFLSM 107
QV+ + M
Sbjct: 282 QVQIMWM 288
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 439
Query: 105 LSM 107
+SM
Sbjct: 440 MSM 442
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
Query: 28 ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
E+S+ ++P + Y RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +
Sbjct: 306 EASEETKPSRRY--GTKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASI 362
Query: 88 LDEIINYIQSLQRQVEFLSM 107
LDE I Y++SLQ QV+ + M
Sbjct: 363 LDETIEYLKSLQMQVQIMWM 382
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 228 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 286
Query: 105 LSM 107
+ M
Sbjct: 287 MWM 289
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 217 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 275
Query: 105 LSM 107
+ M
Sbjct: 276 MWM 278
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 363 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQ 421
Query: 104 FLSMKLEAV 112
+SM V
Sbjct: 422 MMSMGCSMV 430
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RARRG AT S+AER RR +ISERMK LQDLVP +K A +LDE + Y++ LQ Q
Sbjct: 15 TRARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQ 74
Query: 102 VEFLS 106
V+ LS
Sbjct: 75 VKDLS 79
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 495
Query: 105 LSM 107
+SM
Sbjct: 496 MSM 498
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQDLVP +K + +LD ++YI+ LQRQ
Sbjct: 344 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 403
Query: 102 VEFLS 106
+ LS
Sbjct: 404 FKALS 408
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 14/105 (13%)
Query: 5 GSKNENGSKAE-VEASSAAGN-KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARRE 62
G+ E+GS +E VE SAA PA+ + A+R +A + H+L+ER RR+
Sbjct: 235 GAAMESGSPSEDVEFESAAATCSPAQKT-----------TTAKRRRAAEVHNLSERRRRD 283
Query: 63 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q++ + M
Sbjct: 284 RINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQMMWM 327
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQVQ 382
Query: 104 FLSM 107
+ M
Sbjct: 383 MMWM 386
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 14/105 (13%)
Query: 5 GSKNENGSKAE-VEASSAAGN-KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARRE 62
G+ E+GS +E VE SAA PA+ + A+R +A + H+L+ER RR+
Sbjct: 235 GAAMESGSPSEDVEFESAAATCSPAQKT-----------TTAKRRRAAEVHNLSERRRRD 283
Query: 63 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q++ + M
Sbjct: 284 RINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQMMWM 327
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 105 LS------MKLEAVNSRMNL-TPTIEGFHPKDLGEQAF 135
+S M + + + ++ P + FH LG F
Sbjct: 380 MSTMGTAGMCMPPMLAMQHMQMPPMAHFHHHHLGAMGF 417
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
Query: 27 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
A+ ++PS+ P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA
Sbjct: 213 ADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKAS 266
Query: 87 VLDEIINYIQSLQRQVEFLSM 107
+LDE I Y++SLQ QV+ + M
Sbjct: 267 ILDEAIEYLKSLQMQVQIMWM 287
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 317 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 375
Query: 105 LSM 107
+ M
Sbjct: 376 MWM 378
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 507
Query: 105 LSM 107
+SM
Sbjct: 508 MSM 510
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
RR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 333 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASILDEAIEYLKSLQMQVQI 391
Query: 105 LSM 107
+ M
Sbjct: 392 MWM 394
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQVQ 387
Query: 104 FLSM 107
+ M
Sbjct: 388 MMWM 391
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 105 LS------MKLEAVNSRMNL-TPTIEGFHPKDLGEQAF 135
+S M + + + ++ P + FH LG F
Sbjct: 380 MSTMGTAGMCMPPMLAMQHMQMPPMAHFHHHHLGAMGF 417
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y+++LQ QV+
Sbjct: 301 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQ 359
Query: 104 FLSM 107
+SM
Sbjct: 360 MMSM 363
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKS-DKASMLDEAIEYLKSLQLQVQM 415
Query: 105 LSMKLEAV 112
+SM V
Sbjct: 416 MSMGCSMV 423
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y+++LQ QV+
Sbjct: 297 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQ 355
Query: 104 FLSM 107
+SM
Sbjct: 356 MMSM 359
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 26 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
P + + PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A
Sbjct: 122 PTTVTAATHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRA 180
Query: 86 LVLDEIINYIQSLQRQVEFLSM 107
+LDEI++Y++ L+ QV+ LSM
Sbjct: 181 AMLDEIVDYVKFLRLQVKILSM 202
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 383
Query: 105 LS------MKLEAVNSRMNL-TPTIEGFHPKDLGEQAF 135
+S M + + + ++ P + FH LG F
Sbjct: 384 MSTMGTAGMCMPPMLAMQHMQMPPMAHFHHHHLGAMGF 421
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y+++LQ QV+
Sbjct: 32 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKTLQMQVQ 90
Query: 104 FLSM 107
+ M
Sbjct: 91 MMWM 94
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ QV+
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQVQ 387
Query: 104 FLSM 107
+ M
Sbjct: 388 MMWM 391
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
Query: 27 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
A+ ++PS+ P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA
Sbjct: 212 ADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKAS 265
Query: 87 VLDEIINYIQSLQRQVEFLSM 107
+LDE I Y++SLQ QV+ + M
Sbjct: 266 ILDEAIEYLKSLQMQVQIMWM 286
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA RG AT S+AER RR KISERMK LQDLVP ++ A +LD+ + Y++ LQ+Q
Sbjct: 63 IRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQ 122
Query: 102 VEFLS 106
V+ LS
Sbjct: 123 VQELS 127
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y+++LQ QV+
Sbjct: 312 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKT-DKASMLDEAIEYLKTLQLQVQ 370
Query: 104 FLSM 107
+SM
Sbjct: 371 MMSM 374
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
+ RA+RG AT S+AER RR +ISERMK LQDLVP K + +LDE + Y++SLQ
Sbjct: 1 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQ 60
Query: 100 RQVEFLSMKLEAVNSRMNLTP 120
+V+ L+ + + + ++P
Sbjct: 61 MKVKELTETIAQLKAATQMSP 81
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 5/87 (5%)
Query: 19 SSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 78
+S+ K E+SKP PP+ ++R +A + H+L+E+ RR +I+E+MK LQ+L+P
Sbjct: 100 TSSHVEKSVEASKPVPPPRS----SSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNS 155
Query: 79 NKVIGKALVLDEIINYIQSLQRQVEFL 105
NK KA +LDE I Y++ LQ QV++L
Sbjct: 156 NKT-DKASMLDEAIEYLKQLQLQVQYL 181
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 24/144 (16%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +AT+ H+L+ER RR++I+++M+ LQDL+P NKV KA +L E I+Y++SLQ QV+
Sbjct: 371 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKV-DKASMLGEAIDYLKSLQLQVQ 429
Query: 104 FLSMKLEAVNSRMNL--------TPTIEGFHPKDLG-------------EQAFDATGMIF 142
+SM M L P + F P +G F A+GM F
Sbjct: 430 MMSMGTRLCMPLMMLPTGMQHIHAPLLAQFSPMGVGMDTRLMQMGVGCSPATFPASGM-F 488
Query: 143 GSQTAREYAQG-SQQDWLHMQVGG 165
G + SQ + + +GG
Sbjct: 489 GLPAGQMLPMSVSQAPFFPLNIGG 512
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
Query: 27 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
A+ ++PS+ P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA
Sbjct: 209 ADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKAS 262
Query: 87 VLDEIINYIQSLQRQVEFLSM 107
+LDE I Y++SLQ QV+ + M
Sbjct: 263 ILDEAIEYLKSLQMQVQIMWM 283
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 3/74 (4%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+PP+ ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I
Sbjct: 303 KPPQKL--TTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIE 359
Query: 94 YIQSLQRQVEFLSM 107
Y+++LQ QV+ + M
Sbjct: 360 YLKTLQMQVQMMWM 373
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 8/89 (8%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 407
Query: 105 LSMKLEAVNSRMNLT-------PTIEGFH 126
++M M L P+I FH
Sbjct: 408 MAMGSGLCIPPMLLPRAMQLQIPSIAHFH 436
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 24/144 (16%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +AT+ H+L+ER RR++I+++M+ LQDL+P NKV KA +L E I+Y++SLQ QV+
Sbjct: 377 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKV-DKASMLGEAIDYLKSLQLQVQ 435
Query: 104 FLSMKLEAVNSRMNL--------TPTIEGFHPKDLG-------------EQAFDATGMIF 142
+SM M L P + F P +G F A+GM F
Sbjct: 436 MMSMGTRLCMPLMMLPTGMQHIHAPLLAQFSPMGVGMDTRLMQMGVGCSPATFPASGM-F 494
Query: 143 GSQTAREYAQG-SQQDWLHMQVGG 165
G + SQ + + +GG
Sbjct: 495 GLPAGQMLPMSVSQAPFFPLNIGG 518
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
RR +A + H+++ER RR++I+E+M+ LQ+LVP CNK KA +LDE I Y++SLQ QV+
Sbjct: 245 RRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNKT-DKASILDEAIEYLKSLQMQVQI 303
Query: 105 LSM 107
+ M
Sbjct: 304 MWM 306
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
Query: 27 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
A+ ++PS+ P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA
Sbjct: 312 ADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKAS 365
Query: 87 VLDEIINYIQSLQRQVEFLSM 107
+LDE I Y++SLQ QV+ + M
Sbjct: 366 ILDEAIEYLKSLQMQVQIMWM 386
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
+ +RA+RG AT S+AER RR KISERM+ LQDLVP +K A +LD ++YI+ LQ
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQ 389
Query: 100 RQVEFL 105
+Q + L
Sbjct: 390 KQAQKL 395
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Query: 25 KPAESSKPS--EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 82
+P ++ P+ +PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 104 QPMPTTVPAAPQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT- 162
Query: 83 GKALVLDEIINYIQSLQRQVEFLSM 107
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 163 DRAAMLDEIVDYVKFLRLQVKVLSM 187
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 372
Query: 104 FLSM 107
+ M
Sbjct: 373 MMWM 376
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
Query: 27 AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
A+ ++PS+ P RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA
Sbjct: 388 ADETRPSKRP-----AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKAS 441
Query: 87 VLDEIINYIQSLQRQVEFLSM 107
+LDE I Y++SLQ QV+ + M
Sbjct: 442 ILDEAIEYLKSLQMQVQIMWM 462
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Query: 25 KPAESSKPS--EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 82
+P ++ P+ PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 111 QPMPTTMPAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT- 169
Query: 83 GKALVLDEIINYIQSLQRQVEFLSM 107
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 170 DRAAMLDEIVDYVKFLRLQVKVLSM 194
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Query: 25 KPAESSKPS--EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 82
+P ++ P+ PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 111 QPMPTTMPAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT- 169
Query: 83 GKALVLDEIINYIQSLQRQVEFLSM 107
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 170 DRAAMLDEIVDYVKFLRLQVKVLSM 194
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Query: 25 KPAESSKPS--EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 82
+P ++ P+ +PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 101 QPMPTTVPAAPQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT- 159
Query: 83 GKALVLDEIINYIQSLQRQVEFLSM 107
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 160 DRAAMLDEIVDYVKFLRLQVKVLSM 184
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 372
Query: 104 FLSM 107
+ M
Sbjct: 373 MMWM 376
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 12/94 (12%)
Query: 14 AEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 73
AE++ S AGN P + S RR +A + H+L+ER RR++I+E+M+ LQ+
Sbjct: 163 AELDLDSMAGNNPTKRSG-----------STRRSRAAEVHNLSERRRRDRINEKMRALQE 211
Query: 74 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
L+P C K KA +LDE I Y++SLQ Q++ + M
Sbjct: 212 LIPHCYKT-DKASMLDEAIEYLKSLQLQLQVMWM 244
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 8/89 (8%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 217
Query: 105 LSMKLEAVNSRMNL-------TPTIEGFH 126
++M M L P+I FH
Sbjct: 218 MAMGSGLCIPPMLLPRAMQLQIPSIAHFH 246
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQDLVP +K A +LD ++YI+ LQ+Q
Sbjct: 282 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQ 341
Query: 102 VEFLS 106
+ LS
Sbjct: 342 FKTLS 346
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 26 PAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
P + PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A
Sbjct: 121 PTTMAAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRA 179
Query: 86 LVLDEIINYIQSLQRQVEFLSM 107
+LDEI++Y++ L+ QV+ LSM
Sbjct: 180 AMLDEIVDYVKFLRLQVKVLSM 201
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
ARR +A + H+L+ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 353
Query: 104 FLSM 107
+ M
Sbjct: 354 MMWM 357
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK-VIGKALVLDEIINYIQSLQR 100
VRA+RG AT S+AER RR +ISERM+ LQ+LVP +K + A +LDE + Y++SLQ+
Sbjct: 468 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQK 527
Query: 101 QVEFLS 106
QV+ L+
Sbjct: 528 QVQELA 533
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 64/101 (63%), Gaps = 14/101 (13%)
Query: 9 ENGSKAE-VEASSAAGN-KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISE 66
E+GS +E VE SAA PA+ + A+R +A + H+L+ER RR++I+E
Sbjct: 248 ESGSPSEDVEFESAAATCSPAQKT-----------TTAKRRRAAEVHNLSERRRRDRINE 296
Query: 67 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+MK LQ+L+P CNK KA +LDE I Y++SLQ Q++ + M
Sbjct: 297 KMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQMMWM 336
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 18/133 (13%)
Query: 23 GNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 82
GNK ++ P+ P + R+ G+A H L E+ RR KI+ER+K LQ LVPGC+K
Sbjct: 151 GNKVMKNKAPAGGPSSW---RSHHGEA---HKLTEKRRRHKINERLKTLQQLVPGCSKS- 203
Query: 83 GKALVLDEIINYIQSLQRQVEFLSMKLEA-----------VNSRMNLTPTIEGFHPKDLG 131
+A LD+ I+Y++SLQ+QV+ +S+ L A + M + HP LG
Sbjct: 204 NQASTLDQTIHYMKSLQQQVQAMSVGLAAPAVYPIVQPQCMPPGMPVAMPFPAAHPMVLG 263
Query: 132 EQAFDATGMIFGS 144
T + FG+
Sbjct: 264 GHPPSTTMVPFGA 276
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Query: 25 KPAESSKPS--EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 82
+P ++ P+ PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 116 QPMSTTMPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT- 174
Query: 83 GKALVLDEIINYIQSLQRQVEFLSM 107
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 175 DRAAMLDEIVDYVKFLRLQVKVLSM 199
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 12/112 (10%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+RR + H+L E+ RR KI+ER+K LQ LVPGC+K +A LD+ I+Y++SLQ+QV+
Sbjct: 188 SRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSKS-NQASTLDQTIHYMKSLQQQVQ 246
Query: 104 FLSMKLEAVNSRMNL--------TPTIEGF---HPKDLGEQAFDATGMIFGS 144
+S+ L A + TP F HP LG T + FG+
Sbjct: 247 AMSVGLAAPAVYPVVQPQCVPPGTPVAMPFPAAHPMVLGGHPPSTTMVPFGA 298
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA+RG AT S+AER RR +ISERM+ LQDLVP +K + +LD ++YI+ LQRQV
Sbjct: 33 RAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQV 92
Query: 103 EFLS 106
+ LS
Sbjct: 93 QTLS 96
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y
Sbjct: 120 PPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDY 178
Query: 95 IQSLQRQVEFLSM 107
++ L+ QV+ LSM
Sbjct: 179 VKFLRLQVKVLSM 191
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 219 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 278
Query: 102 VEFLS 106
V+ LS
Sbjct: 279 VKTLS 283
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
A+R + + H+++ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 315
Query: 104 FLSM 107
+SM
Sbjct: 316 MMSM 319
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 10/106 (9%)
Query: 15 EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 74
+++ S G +P+E P + +R +A + H+L+E+ RR +I+E+MK LQ+L
Sbjct: 155 DLDCESEEGQEPSEEMSKPAPSRS----STKRSRAAEVHNLSEKRRRSRINEKMKALQNL 210
Query: 75 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTP 120
+P NK KA +LDE I Y++ LQ QV+ LSMK S +NL P
Sbjct: 211 IPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMK-----SGINLAP 250
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 389
Query: 104 FLSM 107
+SM
Sbjct: 390 MMSM 393
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 389
Query: 104 FLSM 107
+SM
Sbjct: 390 MMSM 393
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISERM+ LQ+LVP +K + +LD + YI+ LQ+Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 102 VEFLS 106
V+ LS
Sbjct: 419 VQTLS 423
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISERM+ LQ+LVP +K + +LD + YI+ LQ+Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 102 VEFLS 106
V+ LS
Sbjct: 419 VQTLS 423
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 115 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 173
Query: 104 FLSM 107
+SM
Sbjct: 174 MMSM 177
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 17 EASSAAGNKPAESSKPSEPPK----DYIHVRARRGQATDSHSLAERARREKISERMKILQ 72
E + G+ A S+P PP+ +R +A + H+L+E+ RR KI+E+MK LQ
Sbjct: 70 EDAGGLGDSDAGGSEPEPPPERTRGGSGGGGGKRSRAAEVHNLSEKRRRSKINEKMKALQ 129
Query: 73 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIE 123
L+P NK KA +LDE I Y++ LQ QV+ LSM+ + L+ TIE
Sbjct: 130 SLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMRNGVYLNPPYLSGTIE 179
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQRQ
Sbjct: 285 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 344
Query: 102 VEFLS 106
+ L+
Sbjct: 345 YKILN 349
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 35 PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y
Sbjct: 147 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDY 205
Query: 95 IQSLQRQVEFLSM 107
++ L+ QV+ LSM
Sbjct: 206 VKFLRLQVKVLSM 218
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK K L+++I Y++SLQ Q++
Sbjct: 1139 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYMKSLQMQIQM 1197
Query: 105 LS 106
+S
Sbjct: 1198 MS 1199
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK K LD I Y++ LQ Q++
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLDAAIEYVKWLQSQIQM 193
Query: 105 LSMKLEAVNSRMN 117
+ M + S MN
Sbjct: 194 ILMGQGMMPSMMN 206
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R +A + H+LAER RREKI+E+MK LQ+L+P CNK K L+++I Y++SL+ Q++
Sbjct: 1569 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYVKSLEMQIQH 1627
Query: 105 LSMKL 109
M
Sbjct: 1628 YVMNF 1632
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R + + H+LAER RREKI+E +K LQ+L+P CNK K LD+ I Y++ LQ Q++
Sbjct: 581 KRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKST-KVSTLDDAIEYVKWLQSQIQM 639
Query: 105 LS 106
+S
Sbjct: 640 MS 641
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISERM+ LQDLVP + A +LD + YI+ LQ Q
Sbjct: 303 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 362
Query: 102 VEFL 105
V+ L
Sbjct: 363 VKTL 366
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
ARR ++ + H+ +ER RR+KI+E++K LQ+L+P CNK K +LDE I+Y++SLQ Q++
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKT-DKVSMLDEAIDYLKSLQLQLQ 72
Query: 104 FLSM 107
L M
Sbjct: 73 MLVM 76
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
+ RA+RG AT S+AER RR +ISERMK LQDLVP K A +LDE + Y++SLQ
Sbjct: 3 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSLQ 62
Query: 100 RQVEFL 105
+V L
Sbjct: 63 VKVSEL 68
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
RR +A + H+ +ER RR++I+E+MK LQ+LVP CNK KA +LDE I Y++SLQ QV+
Sbjct: 140 RRARAAEVHNQSERRRRDRINEKMKALQELVPHCNKS-DKASILDEAIEYLKSLQLQVQI 198
Query: 105 LSM 107
+ M
Sbjct: 199 MWM 201
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
A+R + + H+L+ER RR++I+E+M+ LQ+L+P CNKV K+ +L+E I Y+++LQ QV+
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKSSMLEEAIEYLKTLQLQVQ 376
Query: 104 FLSM 107
+SM
Sbjct: 377 MMSM 380
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQ 268
Query: 104 FLSM 107
+SM
Sbjct: 269 MMSM 272
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 41 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
H RR +A + H+ +ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 199 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKA-DKASILDEAIEYLKSLQM 257
Query: 101 QVEFLSM 107
QV+ + M
Sbjct: 258 QVQVMWM 264
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
R +R + + H+L+E+ RREKI+++M+ L+DL+P CNKV KA +LD+ I+Y+++L+ Q
Sbjct: 331 RVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKV-DKASMLDDAIDYLKTLKLQ- 388
Query: 103 EFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
L + ++ L P + GF P L
Sbjct: 389 --LQANFQIMSMGSGLWPLMMGFRPPQL 414
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+RG+ + H+++ER RR++I+E+M+ LQ+L+P CNK I KA +L+E I Y+++LQ QV+
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 324
Query: 105 LS 106
+S
Sbjct: 325 MS 326
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISERM+ LQDLVP + A +LD + YI+ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 102 VEFL 105
V+ L
Sbjct: 364 VKAL 367
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RARRG ATD S+ R RREKI+ER+K LQ LVP KV +LDE I+Y+Q LQ QV
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKV-DIVTMLDEAIHYVQFLQLQV 501
Query: 103 EFL 105
L
Sbjct: 502 TLL 504
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+RG+A + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y+++LQ QV+
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKTLQLQVQV 59
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
Query: 25 KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 84
+PA S+ P +P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +
Sbjct: 130 QPAPSA-PHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DR 187
Query: 85 ALVLDEIINYIQSLQRQVEFLSM 107
A ++DEI++Y++ L+ QV+ LSM
Sbjct: 188 AAMIDEIVDYVKFLRLQVKVLSM 210
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 330
Query: 102 VEFLS 106
+ LS
Sbjct: 331 YKTLS 335
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 41 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
H RR +A + H+ +ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 190 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKA-DKASILDEAIEYLKSLQM 248
Query: 101 QVEFLSM 107
QV+ + M
Sbjct: 249 QVQVMWM 255
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 359
Query: 102 VEFLSMK 108
+ LS K
Sbjct: 360 FKTLSEK 366
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
+RA+RG AT S+AER RR KISER++ LQ+LVP K A +LD ++YI+ LQ
Sbjct: 158 CKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQ 217
Query: 100 RQVEFLSMKLEAVNSRMNLT 119
+QV+ L+ + R N T
Sbjct: 218 KQVKVLN------DGRANCT 231
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 102 VEFLS 106
+ L+
Sbjct: 339 YKILN 343
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQRQ
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 359
Query: 102 VEFLS 106
+ L+
Sbjct: 360 YKILN 364
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQDL P +K A +LD + YI+ LQ+Q
Sbjct: 350 IRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQ 409
Query: 102 VEFL 105
V+ L
Sbjct: 410 VKTL 413
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 19 SSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGC 78
S A G+ E S+ P+ ++R +A + H+L+E+ RR +I+E+MK LQ L+P
Sbjct: 133 SEAGGSSEPEPHGTSDRPRGGGGSGSKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNS 192
Query: 79 NKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 193 NKT-DKASMLDEAIEYLKQLQLQVQMLSMR 221
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 102 VEFLS 106
+ L+
Sbjct: 339 YKILN 343
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 41 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
H RR +A + H+ +ER RR++I+E+M+ LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 228 HGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKA-DKASILDEAIEYLKSLQM 286
Query: 101 QVEFLSM 107
Q++ + M
Sbjct: 287 QLQIMWM 293
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISER++ LQ+LVP K A +LD ++YI+ LQ+Q
Sbjct: 325 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQ 384
Query: 102 VEFLS 106
V+ L+
Sbjct: 385 VKVLN 389
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
Query: 25 KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 84
+PA S+ P +P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +
Sbjct: 130 QPAPSA-PHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DR 187
Query: 85 ALVLDEIINYIQSLQRQVEFLSM 107
A ++DEI++Y++ L+ QV+ LSM
Sbjct: 188 AAMIDEIVDYVKFLRLQVKVLSM 210
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 30 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 89
S P +P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++D
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMID 192
Query: 90 EIINYIQSLQRQVEFLSM 107
EI++Y++ L+ QV+ LSM
Sbjct: 193 EIVDYVKFLRLQVKVLSM 210
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 30 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 89
S P +P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++D
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMID 192
Query: 90 EIINYIQSLQRQVEFLSM 107
EI++Y++ L+ QV+ LSM
Sbjct: 193 EIVDYVKFLRLQVKVLSM 210
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 322 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 381
Query: 102 VEFLSMKLEAVNSRMNLT 119
V+ L+ +SR N T
Sbjct: 382 VKGLN------DSRANCT 393
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 292 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 351
Query: 102 VEFL 105
V+ L
Sbjct: 352 VKVL 355
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 30 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 89
S P +P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++D
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMID 192
Query: 90 EIINYIQSLQRQVEFLSM 107
EI++Y++ L+ QV+ LSM
Sbjct: 193 EIVDYVKFLRLQVKVLSM 210
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+R +A + H+L+ER RR++I+E+MK LQ+L+P NK KA +LDE I+Y++SLQ QV+
Sbjct: 254 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKS-DKASMLDEAIDYLKSLQLQVQ 312
Query: 104 FLSM 107
+SM
Sbjct: 313 MMSM 316
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 285 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 344
Query: 102 VEFL 105
V+ L
Sbjct: 345 VKVL 348
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 294 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQ 353
Query: 102 VEFLSMK 108
+ LS K
Sbjct: 354 FKTLSEK 360
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +LDE + Y++ LQ
Sbjct: 168 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQ 227
Query: 100 RQVEFLS 106
RQ++ L+
Sbjct: 228 RQIQELT 234
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 377
Query: 102 VEFLSMKLEAVNSRMNLT 119
V+ L+ +SR N T
Sbjct: 378 VKGLN------DSRANCT 389
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 30 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 89
S P +P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++D
Sbjct: 71 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMID 129
Query: 90 EIINYIQSLQRQVEFLSM 107
EI++Y++ L+ QV+ LSM
Sbjct: 130 EIVDYVKFLRLQVKVLSM 147
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
A+R +A H+L+ER RR++I+E+M+ LQ+LVP CNK KA +LDE I Y++SLQ Q++
Sbjct: 233 AKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNKT-DKASMLDEAIEYLKSLQLQLQ 291
Query: 104 FLSMKLEAVNSRMNLTPTI 122
+ A+ RM P +
Sbjct: 292 V----MWAMGGRMAPAPVM 306
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 362 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 421
Query: 102 VE 103
V+
Sbjct: 422 VK 423
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
R RR + H+L+E+ RREKI+++M+ L++L+P CNKV KA +LD+ I+Y+++L+ Q+
Sbjct: 321 RVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNKV-DKASMLDDAIDYLKTLKLQL 379
Query: 103 EFLS--------MKLEAVNSRMNLTPTI-EGFHPKDL 130
+ +S M L A + ++ P + GF P L
Sbjct: 380 QIMSMGNGLWPLMMLPAATTAHHMNPQLGMGFRPPQL 416
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA RG AT S+AER RR KISERMK LQ+LVP ++ A +LD+ + Y++ LQ Q
Sbjct: 379 LRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQ 438
Query: 102 VEFLS 106
V+ L+
Sbjct: 439 VQELT 443
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 9 ENG-SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISER 67
ENG S ++ + S+ + +++ S PK RA RG ATD SL R RRE+I+ER
Sbjct: 207 ENGRSSCDMNSCSSDNSSEDDNNNASPKPK----TRATRGSATDPQSLYARKRRERINER 262
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
++ILQ LVP KV + +L+E ++Y++ LQ Q++ LS
Sbjct: 263 LRILQKLVPNGTKV-DISTMLEEAVHYVKFLQLQIKLLS 300
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%), Gaps = 8/95 (8%)
Query: 14 AEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 73
E E A G+ ++ ++P+ P R +R +A + H+L+E+ RR +I+E+MK LQ
Sbjct: 20 CESEVQDALGSSESDPARPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQT 72
Query: 74 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
L+P +K KA +LD+ I Y++ LQ QV+ LSM+
Sbjct: 73 LIPNSSKT-DKASMLDDAIEYLKHLQLQVQMLSMR 106
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 102 VEFL 105
V+ L
Sbjct: 357 VKAL 360
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
A+R +A H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 247 AKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKA-DKASMLDEAIEYLKSLQLQLQ 305
Query: 104 FLSM 107
+ M
Sbjct: 306 VVWM 309
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 102 VEFLSMKLEAVNSRMNLT 119
V+ L+ +SR N T
Sbjct: 129 VKGLN------DSRANCT 140
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 9 ENG-SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISER 67
ENG S ++ + S+ + +++ S PK RA RG ATD SL R RRE+I+ER
Sbjct: 207 ENGRSSCDMNSCSSDNSSEDDNNNASPKPK----TRATRGSATDPQSLYARKRRERINER 262
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
++ILQ LVP KV + +L+E ++Y++ LQ Q++ LS
Sbjct: 263 LRILQKLVPNGTKV-DISTMLEEAVHYVKFLQLQIKLLS 300
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E +NY++ LQ Q
Sbjct: 264 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQLQ 322
Query: 102 VEFLS 106
++ LS
Sbjct: 323 IKLLS 327
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 102 VEFL 105
V+ L
Sbjct: 357 VKAL 360
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 15/100 (15%)
Query: 9 ENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERM 68
E G +E EA AAG +P S ++R +A + H+L+E+ RR KI+E+M
Sbjct: 1 EAGGSSEPEA--AAGARPRGGSG------------SKRSRAAEVHNLSEKRRRSKINEKM 46
Query: 69 KILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
K LQ L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 47 KALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 85
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
RR ++ + H+ +ER RR+KI+E++K LQ+L+P CNK K +LDE I+Y++SLQ Q++
Sbjct: 14 TRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKT-DKVSMLDEAIDYLKSLQLQLQ 72
Query: 104 FLSM 107
L M
Sbjct: 73 MLVM 76
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA+RG ATD S+ R RREKI+ER+K LQ+LVP KV +LDE I+Y++ LQ QV
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKV-DIVTMLDEAIHYVKFLQTQV 501
Query: 103 EFL 105
E L
Sbjct: 502 ELL 504
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 59/92 (64%), Gaps = 8/92 (8%)
Query: 17 EASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 76
E+ A G+ ++ ++P+ P R +R +A + H+L+E+ RR +I+E+MK LQ L+P
Sbjct: 22 ESEDALGSSESDPARPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIP 74
Query: 77 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
+K KA +LD+ I Y++ LQ QV+ LSM+
Sbjct: 75 NSSKT-DKASMLDDAIEYLKQLQLQVQMLSMR 105
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +LDE + Y++ LQ+Q
Sbjct: 81 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQ 140
Query: 102 VEFLS 106
+E LS
Sbjct: 141 IEELS 145
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 48/67 (71%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
+RA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E ++Y++ LQ
Sbjct: 186 CKIRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQ 245
Query: 100 RQVEFLS 106
RQ++ L+
Sbjct: 246 RQIQELT 252
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella
moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella
moellendorffii]
Length = 61
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 34/39 (87%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK 80
VRARRGQATD HS+AER RREKI+ERMK LQ+LVP NK
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E +NY++ LQ Q
Sbjct: 261 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVNYVKFLQLQ 319
Query: 102 VEFLS 106
++ LS
Sbjct: 320 IKLLS 324
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R ++ + HSL+E+ RR++I+++M+ LQ+L+P C KV K +LDE I+Y+++LQ QV+
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKV-DKISILDEAIDYLKTLQLQVQ 437
Query: 104 FLSM 107
+SM
Sbjct: 438 VMSM 441
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISER++ LQ+LVP K A +LD ++YI+ LQ+Q
Sbjct: 319 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 378
Query: 102 VEFL 105
V+ L
Sbjct: 379 VKVL 382
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISER++ LQ+LVP K A +LD ++YI+ LQ+Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 377
Query: 102 VEFLS 106
V+ L+
Sbjct: 378 VKVLN 382
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE- 103
+R + + H+LAER RREKI+E+MK LQ L+P CNK K LD+ I Y++SLQ Q++
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQG 310
Query: 104 FLSMKLEAVNSR 115
+S + A N++
Sbjct: 311 MMSPMMNAGNTQ 322
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Query: 16 VEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 75
E+ A G+ ++ ++P+ P R +R +A + H+L+E+ RR +I+E+MK LQ L+
Sbjct: 20 CESEDALGSSESDPARPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLI 72
Query: 76 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
P +K KA +LD+ I Y++ LQ QV+ LSM+
Sbjct: 73 PNSSKT-DKASMLDDAIEYLKHLQLQVQMLSMR 104
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 9/98 (9%)
Query: 15 EVEASSAAGNKPAESSKPSEPPKDYIHVRAR-----RGQATDSHSLAERARREKISERMK 69
E E S+ N P + S + K +H R R R ++T+ H L ER RR++ +++M+
Sbjct: 191 EEEESTYLSNNPDDESDDA---KTQVHARIRKPVTKRKRSTEVHKLYERKRRDEFNKKMR 247
Query: 70 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
LQD++P C K KA +LDE + Y+++LQ QV+ +SM
Sbjct: 248 ALQDILPNCYK-DDKASLLDEAVKYMRTLQHQVQMMSM 284
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Query: 16 VEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 75
E+ A G+ ++ ++P+ P R +R +A + H+L+E+ RR +I+E+MK LQ L+
Sbjct: 20 CESEDALGSSESDPARPARP-------RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLI 72
Query: 76 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
P +K KA +LD+ I Y++ LQ QV+ LSM+
Sbjct: 73 PNSSKT-DKASMLDDAIEYLKHLQLQVQMLSMR 104
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 12 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 71
S A +E + A PA PP + RA G ATD SL R RRE+I+ER++IL
Sbjct: 241 SNAYLEPNGGASKDPA-------PPNLHRKSRATTGAATDPQSLYARKRRERINERLRIL 293
Query: 72 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
Q+LVP KV + +L+E + Y++ LQ Q++ LS
Sbjct: 294 QNLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 327
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +LDE + Y++ LQ Q
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQ 177
Query: 102 VEFLS 106
+E LS
Sbjct: 178 IEELS 182
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 317 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 376
Query: 102 VEFL 105
V+ L
Sbjct: 377 VKAL 380
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 10 NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMK 69
NGS A S N ES+ PK RA RG +TD SL R RRE+I+ER+K
Sbjct: 185 NGSTASCCTSDDDSNASQESADTGVCPKG--KARAARGASTDPQSLYARKRRERINERLK 242
Query: 70 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
LQ LVP KV + +L+E ++Y++ LQ Q++ LS
Sbjct: 243 TLQTLVPNGTKV-DMSTMLEEAVHYVKFLQLQIKVLS 278
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 303 IRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQ 362
Query: 102 VEFLSMK 108
+ LS K
Sbjct: 363 FKTLSDK 369
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRG AT S+AER RR +IS+R+K LQDLVP +K + +LD ++YI+ L+ Q
Sbjct: 280 VRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDQ 339
Query: 102 VEFL 105
VE L
Sbjct: 340 VEKL 343
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISER++ LQ+LVP K A +LD ++YI+ LQ+Q
Sbjct: 297 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 356
Query: 102 VEFLS 106
V+ L+
Sbjct: 357 VKVLN 361
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 15/101 (14%)
Query: 8 NENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISER 67
+E G +E EA AAG +P S ++R +A + H+L+E+ RR KI+E+
Sbjct: 77 SEAGGSSEPEA--AAGARPRGGSG------------SKRSRAAEVHNLSEKRRRSKINEK 122
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
MK LQ L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 123 MKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 162
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 15/101 (14%)
Query: 8 NENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISER 67
+E G +E EA AAG +P S ++R +A + H+L+E+ RR KI+E+
Sbjct: 77 SEAGGSSEPEA--AAGARPRGGSG------------SKRSRAAEVHNLSEKRRRSKINEK 122
Query: 68 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
MK LQ L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 123 MKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 162
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+L P +K A +LD + YI+ LQ+Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 392
Query: 102 VEFLS 106
V+ L+
Sbjct: 393 VKTLN 397
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
ARR +A H+ +ER RR++I+E+MK LQ LVP +K KA +LDE+I Y++ LQ QV+
Sbjct: 257 ARRSRAAAIHNQSERRRRDRINEKMKALQKLVPNASKT-DKASMLDEVIEYLKQLQAQVQ 315
Query: 104 FLSMK 108
F+S++
Sbjct: 316 FMSVR 320
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 30 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 89
Query: 102 VEFLS 106
+ LS
Sbjct: 90 YKTLS 94
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 184 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 243
Query: 100 RQVEFLS 106
RQ++ L+
Sbjct: 244 RQIQELT 250
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
VRA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ
Sbjct: 192 CKVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQ 251
Query: 100 RQVEFL 105
+QV+ L
Sbjct: 252 KQVKAL 257
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 321 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 380
Query: 102 VEFLS 106
L+
Sbjct: 381 YNTLT 385
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Query: 33 SEPPKDYIHVR--ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDE 90
+E P + + R ++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE
Sbjct: 108 AEVPSETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDE 166
Query: 91 IINYIQSLQRQVEFLSMK 108
I Y++ LQ QV+ L+M+
Sbjct: 167 AIEYLKQLQLQVQMLTMR 184
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 182 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 241
Query: 100 RQVEFLS 106
RQ++ L+
Sbjct: 242 RQIQELT 248
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
A+R +A + H+L+ER RR++I+E+MK LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 310 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT-DKASMLDEAIEYLKSLQLQLQ 368
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 228
Query: 104 FLSMK 108
LSM+
Sbjct: 229 MLSMR 233
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
R+ G+A H+L E+ RR KI+ER+K LQ LVPGC+K +A LD+ I+Y++SLQ QV
Sbjct: 162 RSHHGEA---HNLTEKRRRHKINERLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQHQV 217
Query: 103 EFLSMKL 109
+ +S+ L
Sbjct: 218 QAMSVGL 224
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 228
Query: 104 FLSMK 108
LSM+
Sbjct: 229 MLSMR 233
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 5 GSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
S+NE + + E+ E + PP+ ++R +A + H+L+E+ RR +I
Sbjct: 122 ASENETDHECDCESEEGLEALIEEVQTKAAPPRS----SSKRSRAAEVHNLSEKRRRSRI 177
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ LS++
Sbjct: 178 NEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSLR 220
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 310 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 369
Query: 102 VEFLS 106
L+
Sbjct: 370 YNTLT 374
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT SLAER RR +ISERM+ LQ++VP +K + +LD + YI+ LQ+Q
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQ 302
Query: 102 VEFLSMK 108
++ +S K
Sbjct: 303 LKTMSAK 309
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQ 330
Query: 102 VEFLS 106
+ LS
Sbjct: 331 YKTLS 335
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 17 EASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 76
E+ A G+ +ES +P+ P + R +R +A + H+L+E+ RR +I+E+MK LQ L+P
Sbjct: 29 ESEEALGS--SESEQPTRPARP----RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIP 82
Query: 77 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
+K KA +LD+ I Y++ LQ QV+ LSM+
Sbjct: 83 NSSKT-DKASMLDDAIEYLKQLQLQVQMLSMR 113
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ Q
Sbjct: 148 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 206
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 207 VKVLSM 212
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RAR+G A D S+A R RRE+IS+R+KILQ+LVP KV +L++ INY++ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 103 EFLS 106
+ L+
Sbjct: 418 KVLT 421
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
Query: 37 KDYIHVRAR-----RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 91
K +H R R R ++T+ H L ER RR++ +++M+ LQDL+P C K KA +LDE
Sbjct: 213 KTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEA 271
Query: 92 INYIQSLQRQVEFLSM 107
I Y+++LQ QV+ +SM
Sbjct: 272 IKYMRTLQLQVQMMSM 287
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 359
Query: 102 VEFLSMKLEAVNSRMNLT 119
V+ ++ SR N T
Sbjct: 360 VKVIN------ESRANCT 371
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 17 EASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 76
E+ A G+ +ES +P+ P + R +R +A + H+L+E+ RR +I+E+MK LQ L+P
Sbjct: 29 ESEEALGS--SESEQPTRPARP----RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIP 82
Query: 77 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
+K KA +LD+ I Y++ LQ QV+ LSM+
Sbjct: 83 NSSKT-DKASMLDDAIEYLKQLQLQVQMLSMR 113
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 29 SSKPSEPPKDYI---HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
SSK +P K RA RG ATD SL R RRE+I+ER++ILQ+LVP KV +
Sbjct: 250 SSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DIS 308
Query: 86 LVLDEIINYIQSLQRQVEFLS 106
+L+E ++Y++ LQ Q++ LS
Sbjct: 309 TMLEEAVHYVKFLQLQIKLLS 329
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
Query: 37 KDYIHVRAR-----RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 91
K +H R R R ++T+ H L ER RR++ +++M+ LQDL+P C K KA +LDE
Sbjct: 213 KTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEA 271
Query: 92 INYIQSLQRQVEFLSM 107
I Y+++LQ QV+ +SM
Sbjct: 272 IKYMRTLQLQVQMMSM 287
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 17 EASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 76
E+ A G+ +ES +P+ P + R +R +A + H+L+E+ RR +I+E+MK LQ L+P
Sbjct: 7 ESEEALGS--SESEQPTRPARP----RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIP 60
Query: 77 GCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
+K KA +LD+ I Y++ LQ QV+ LSM+
Sbjct: 61 NSSKT-DKASMLDDAIEYLKQLQLQVQMLSMR 91
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K A +LD + YI+ LQ+Q
Sbjct: 196 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 255
Query: 102 VEFLS 106
L+
Sbjct: 256 YNTLT 260
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 9/81 (11%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 277 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 335
Query: 102 VEFLSMKLEAVNSRMNLTPTI 122
V+ + SRMN+ P +
Sbjct: 336 VQMM--------SRMNIQPVM 348
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E ++Y+ LQ Q
Sbjct: 272 TRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVHYVNFLQLQ 330
Query: 102 VEFLS 106
++ LS
Sbjct: 331 IKLLS 335
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 29 SSKPSEPPKDYI---HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
SSK +P K RA RG ATD SL R RRE+I+ER++ILQ+LVP KV +
Sbjct: 250 SSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DIS 308
Query: 86 LVLDEIINYIQSLQRQVEFLS 106
+L+E ++Y++ LQ Q++ LS
Sbjct: 309 TMLEEAVHYVKFLQLQIKLLS 329
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISER+K LQDL P K A +LD + YI+ LQ++
Sbjct: 366 IRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQK 425
Query: 102 VEFLS 106
V+ LS
Sbjct: 426 VKILS 430
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R ++ + HSL+E+ RR++I+++M+ LQ+L+P C KV K +LDE I+Y+++LQ QV+
Sbjct: 10 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKV-DKISILDEAIDYLKTLQLQVQ 68
Query: 104 FLSM 107
+SM
Sbjct: 69 VMSM 72
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Query: 26 PAESSKPSEPPKDYIH--VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV-- 81
P++ S PK + +R +A + H+L+ER RR++I+E+MK LQ+L+P CNK+
Sbjct: 34 PSDVEYESADPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSS 93
Query: 82 -----IGKALVLDEIINYIQSLQRQVEFLSM 107
KA +LDE I Y+++LQ QV+ +
Sbjct: 94 FTDSQTDKASMLDEAIEYLKTLQLQVQIFVL 124
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+RR ++H+L E+ RR KI+ER+K LQ +VPGC+K +A LD+ I+Y++SLQ QV+
Sbjct: 172 SRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSKS-NQASTLDQTIHYMKSLQHQVQ 230
Query: 104 FLS 106
+S
Sbjct: 231 AMS 233
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 11 GSKAEVEASSAAGNK---PAESSKPSEPPKDYIHVRARRGQAT---DSHSLAERARREKI 64
GS+ E + +AGNK ES++PS+ P + +A+ T D SLA + RRE+I
Sbjct: 156 GSRHESMSPKSAGNKRSQTGESTQPSKKPNSGVTGKAKPKPTTSPKDPQSLAAKNRRERI 215
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
SER+KILQ+LVP KV +L++ I+Y++ LQ QV+ L+
Sbjct: 216 SERLKILQELVPNGTKV-DLVTMLEKAISYVKFLQVQVKVLA 256
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ Q
Sbjct: 307 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 366
Query: 102 VEFLS 106
V+ ++
Sbjct: 367 VKVIN 371
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 5 GSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
GS + + ++SS+ ++ ++P + RA RG ATD SL R RRE+I
Sbjct: 150 GSDEGGNTYIDTQSSSSCTSEEGNLEGNAKPSSKKMGTRANRGAATDPQSLYARKRRERI 209
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
+ER++ILQ+LVP KV + +L+E + Y++ LQ Q++ LS
Sbjct: 210 NERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 250
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
RR ++ D H+ +ER RR++I+E++K LQ+L+P C K K +LDE I+Y++SLQ Q++
Sbjct: 16 TRRSRSADFHNFSERRRRDRINEKLKALQELLPNCTKT-DKVSMLDEAIDYLKSLQLQLQ 74
Query: 104 FLSM 107
L M
Sbjct: 75 MLVM 78
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 29 SSKPSEPPKDYI---HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
SSK +P K RA RG ATD SL R RRE+I+ER++ILQ+LVP KV +
Sbjct: 247 SSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DIS 305
Query: 86 LVLDEIINYIQSLQRQVEFLS 106
+L+E ++Y++ LQ Q++ LS
Sbjct: 306 TMLEEAVHYVKFLQLQIKLLS 326
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
+R +A + H+LAER RREKI+ERMK LQ L+P CNK K +L+++I Y++SL+ Q+
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQI 203
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 5 GSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
GS + + ++SS+ ++ ++P + RA RG ATD SL R RRE+I
Sbjct: 150 GSDEGGNTYIDTQSSSSCTSEEGNLEGNAKPSSKKMGTRANRGAATDPQSLYARKRRERI 209
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
+ER++ILQ+LVP KV + +L+E + Y++ LQ Q++ LS
Sbjct: 210 NERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 250
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 43 RARRG-QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RARR + + +HSL ER RR KI+E +K LQ LVPGC+K +A LD+ I Y++SLQ+
Sbjct: 112 RARRSSRYSQTHSLTERKRRCKINENLKTLQQLVPGCDKSNNQASTLDKTIRYMKSLQQH 171
Query: 102 VEFLSM 107
V+ +S+
Sbjct: 172 VQAMSV 177
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ Q
Sbjct: 139 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 197
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 198 VKVLSM 203
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
SSK + PP+ ++R +A + H+L+E+ RR KI+E++K LQ+L+P NK KA +L
Sbjct: 76 SSKAAPPPRS----SSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKT-DKASML 130
Query: 89 DEIINYIQSLQRQVEFL---------SMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATG 139
DE I Y++ LQ QV+ L M L + + P E F+ D G F +
Sbjct: 131 DEAIEYLKQLQLQVQMLMVRNGYSLHPMSLSGGSRPPTMFPQTELFN-LDEGNSGFHNSN 189
Query: 140 MIFGSQTAREY 150
T EY
Sbjct: 190 NAITPPTNNEY 200
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+L P +K A +LD + YI+ LQ+Q
Sbjct: 171 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 230
Query: 102 VEFLS 106
V+ L+
Sbjct: 231 VKTLN 235
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISER++ LQ+LVP +K + +LD ++YI+ LQ+Q
Sbjct: 288 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 347
Query: 102 VE 103
V+
Sbjct: 348 VK 349
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 135 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 193
Query: 104 FLSMK 108
LSM+
Sbjct: 194 MLSMR 198
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E + Y++ LQ Q+
Sbjct: 260 RASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVEYVKFLQLQI 318
Query: 103 EFLS 106
+ LS
Sbjct: 319 KLLS 322
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 202
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 203 VKVLSM 208
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 19/115 (16%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+++E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 154 SKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 212
Query: 104 FLSMKLEAVNSRMNLTPTI--EGFHP-------KDLGEQA----FDATGMIFGSQ 145
LSM+ + M+L P P DLGE+ D TG + +Q
Sbjct: 213 MLSMR-----NGMSLHPMCLPGALQPVQVSQMRMDLGEENRPLHLDMTGTLLMNQ 262
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
VRARRG AT S+AER RR +IS+R+K LQDLVP +K + +LD + YI+ L+
Sbjct: 150 CRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVEYIKELK 209
Query: 100 RQVEFL 105
QVE L
Sbjct: 210 DQVEKL 215
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E + Y++ LQ Q+
Sbjct: 256 RASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVEYVKFLQLQI 314
Query: 103 EFLS 106
+ LS
Sbjct: 315 KLLS 318
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
Query: 22 AGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 81
A KP S PS +R +A + H+L+E+ RR +I+E+MK LQ+L+P NK
Sbjct: 131 APAKPTTSRNPS-----------KRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT 179
Query: 82 IGKALVLDEIINYIQSLQRQVEFLSMK 108
KA +LDE I Y++ LQ QV+ L+M+
Sbjct: 180 -DKASMLDEAIEYLKQLQLQVQMLTMR 205
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E + Y++ LQ Q+
Sbjct: 255 RASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVEYVKFLQLQI 313
Query: 103 EFLS 106
+ LS
Sbjct: 314 KLLS 317
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 265 TRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 323
Query: 102 VEFLS 106
++ LS
Sbjct: 324 IKLLS 328
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISER+K LQDL P K A +LD + +I+ LQ+Q
Sbjct: 361 IRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQ 420
Query: 102 VEFLS 106
V+ LS
Sbjct: 421 VQILS 425
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +IS R+K LQDL P +K A +LD + YI+ LQ+Q
Sbjct: 360 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQ 419
Query: 102 VEFL 105
V+ L
Sbjct: 420 VKIL 423
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +IS R+K LQDL P +K A +LD + YI+ LQ+Q
Sbjct: 356 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQ 415
Query: 102 VEFL 105
V+ L
Sbjct: 416 VKML 419
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RAR+G A D S+A R RRE+ISER+K+LQ L+P +KV +L++ I+Y+Q L+ Q+
Sbjct: 640 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAISYVQCLEFQI 698
Query: 103 EFL 105
+ L
Sbjct: 699 KML 701
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K + +LD ++YI+ LQ Q
Sbjct: 300 VRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 359
Query: 102 VEFL 105
+E L
Sbjct: 360 IEKL 363
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RAR+G A D S+A R RRE+ISER+K+LQ L+P +KV +L++ I Y+Q L+ Q+
Sbjct: 755 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAITYVQCLELQI 813
Query: 103 EFL 105
+ L
Sbjct: 814 KML 816
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 160
Query: 104 FLSMK 108
LSM+
Sbjct: 161 MLSMR 165
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 345
Query: 102 VEFLS 106
++ LS
Sbjct: 346 IKLLS 350
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 345
Query: 102 VEFLS 106
++ LS
Sbjct: 346 IKLLS 350
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 36 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + +RA+RG AT S+AER RR +IS R+K LQDLVP +K A +LD +
Sbjct: 291 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGRLKKLQDLVPNMDKQTSYADMLDLAVQ 350
Query: 94 YIQSLQRQVEFLSMKLEAVNSRMNLTPT 121
+I+ LQ +V+ L +LE N PT
Sbjct: 351 HIKGLQGEVQKLHKELE--NCTCGCKPT 376
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
RR ++ D H+ +ER RR++I+E+++ LQ+L+P C K K +LDE I+Y++SLQ Q++
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKT-DKVSMLDEAIDYLKSLQLQLQM 75
Query: 105 LSM 107
L M
Sbjct: 76 LVM 78
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +IS+R++ LQDLVP +K + +LD ++YI+ LQ Q
Sbjct: 295 VRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 354
Query: 102 VEFL 105
+E L
Sbjct: 355 IEKL 358
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 82 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQ 141
Query: 100 RQVEFL 105
+Q+E L
Sbjct: 142 KQIEEL 147
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
R +R +A + H+L+E+ RR KI+E+MK LQ LVP +K KA +LD+ I Y++ LQ QV
Sbjct: 45 RGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSKT-DKASMLDDAIEYLKHLQLQV 103
Query: 103 EFLSMKLEAVNSRMNL 118
+ LSM+ +NL
Sbjct: 104 QMLSMRNGVYRPSVNL 119
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+P RA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD +
Sbjct: 85 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 144
Query: 94 YIQSLQRQVEFL 105
YI+ LQ QVE L
Sbjct: 145 YIKELQGQVEKL 156
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
R+ RG ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E + Y++ LQ Q+
Sbjct: 225 RSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
Query: 103 EFLS 106
+ LS
Sbjct: 284 KLLS 287
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 181 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQ 240
Query: 100 RQVEFLS 106
+Q++ L+
Sbjct: 241 KQIQELT 247
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISER++ LQ+LVP K + +LD ++YI+ LQ Q
Sbjct: 327 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 386
Query: 102 VEFLS 106
V+ ++
Sbjct: 387 VKVMN 391
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+RR ++H+L E+ RR KI+ER K LQ +VPGC+K +A LD+ I+Y++SLQ QV+
Sbjct: 175 SRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSKS-NQASTLDQTIHYMKSLQHQVQ 233
Query: 104 FLS 106
+S
Sbjct: 234 AMS 236
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RAR+G A D S+A R RRE+ISER+K+LQ L+P +KV +L++ I+Y+Q L+ Q+
Sbjct: 823 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAISYVQCLEFQI 881
Query: 103 EFL 105
+ L
Sbjct: 882 KML 884
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 17 EASSAAGNKPAESSKPSEPPK---DYIHVRARRGQATDSHSLAERARREKISERMKILQD 73
E + G+ A S+P PP+ ++R +A + H+L+E+ RR KI+E+MK LQ
Sbjct: 49 EDAGGLGDSDAGGSEPEAPPERTRGGGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQS 108
Query: 74 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 109 LIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 142
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
R+ RG ATD S+ R RREKI+ER+KILQ+LVP KV + +L+E + Y++ LQ Q+
Sbjct: 247 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 305
Query: 103 EFLS 106
+ LS
Sbjct: 306 KLLS 309
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISER+K LQ+L P +K A +L+ + YI+ LQRQ
Sbjct: 342 IRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQ 401
Query: 102 VEFLS 106
V+ L+
Sbjct: 402 VKTLT 406
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q+
Sbjct: 94 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 152
Query: 103 EFLS 106
+ LS
Sbjct: 153 KLLS 156
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+P RA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD +
Sbjct: 148 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 207
Query: 94 YIQSLQRQVEFL 105
YI+ LQ QVE L
Sbjct: 208 YIKELQGQVEKL 219
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
RR ++ D H+ +ER RR++I+E+++ LQ+L+P C K K +LDE I+Y++SLQ Q++
Sbjct: 15 TRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKT-DKVSMLDEAIDYLKSLQLQLQ 73
Query: 104 FLSM 107
L M
Sbjct: 74 MLVM 77
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR KISER++ LQ+LVP K + +LD ++YI+ LQ Q
Sbjct: 324 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 383
Query: 102 VEFLS 106
V+ ++
Sbjct: 384 VKVMN 388
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 11/85 (12%)
Query: 23 GNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 82
G+ P S+ P+ RR ++ + H+ +ER RR++I+E++K LQ+L+P C K
Sbjct: 4 GSAPRRSTPPT----------TRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKT- 52
Query: 83 GKALVLDEIINYIQSLQRQVEFLSM 107
K +LDE I+Y++SLQ Q++ L M
Sbjct: 53 DKVSMLDEAIDYLKSLQLQLQMLVM 77
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A H L+ER RR+KI+E MK LQ+L+P C K ++ +LD++I Y++SLQ Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQIQ 331
Query: 104 FLSM 107
SM
Sbjct: 332 MFSM 335
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 36 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + VRA+RG AT S+AER RR +IS ++K LQDLVP +K A +LD +
Sbjct: 271 PEDSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQ 330
Query: 94 YIQSLQRQVEFLSMKLE 110
+I+ LQ +V+ L+ +LE
Sbjct: 331 HIKGLQNEVQKLNKELE 347
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 36 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K A +L+ +
Sbjct: 255 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKTLQDLVPNMDKQTSYADMLELAVK 314
Query: 94 YIQSLQRQVEFLSMKLEAV 112
+I+ LQ +VE L +LE
Sbjct: 315 HIKGLQNEVEKLHKELEGC 333
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+P RA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD +
Sbjct: 301 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 360
Query: 94 YIQSLQRQVEFL 105
YI+ LQ QVE L
Sbjct: 361 YIKELQGQVEKL 372
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%)
Query: 34 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
+P RA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD +
Sbjct: 301 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 360
Query: 94 YIQSLQRQVEFL 105
YI+ LQ QVE L
Sbjct: 361 YIKELQGQVEKL 372
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+L P +K A +LD + +I+ LQ+Q
Sbjct: 337 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQ 396
Query: 102 VEFLS 106
V+ L+
Sbjct: 397 VKTLT 401
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDL--VPGCNKVIGKALVLDEIINYIQSLQRQ 101
ARR +A + H+L+ER RR++I+E+M+ LQ+L +P CNK KA +LDE I Y++SLQ Q
Sbjct: 162 ARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNKT-DKASMLDEAIEYLKSLQLQ 220
Query: 102 VEFLSM 107
+ + M
Sbjct: 221 LRVMWM 226
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 36 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + VRA+RG AT S+AER RR +IS ++K LQDLVP +K A +LD +
Sbjct: 324 PEDSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQ 383
Query: 94 YIQSLQRQVEFLSMKLE 110
+I+ LQ +V+ L+ +LE
Sbjct: 384 HIKGLQNEVQKLNKELE 400
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y+++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 102 VEFLS 106
++ L+
Sbjct: 241 IQELT 245
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q
Sbjct: 264 TRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTKV-DISTMLEEAVQYVKFLQLQ 322
Query: 102 VEFLS 106
++ LS
Sbjct: 323 IKLLS 327
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA RG ATD SL R RREKI+ER++ LQ+LVP KV + +L++ I+Y++ LQ Q+
Sbjct: 199 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKV-DISTMLEDAIHYVKFLQLQI 257
Query: 103 EFLS 106
+ LS
Sbjct: 258 KLLS 261
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R ++ + H+++E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 250
Query: 104 FLSMK 108
LSM+
Sbjct: 251 MLSMR 255
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
+ RAR+G A D S+A R RRE+ISER+K+LQ L+P +KV +L++ I Y+Q L+
Sbjct: 46 LKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKV-DMVTMLEKAITYVQCLE 104
Query: 100 RQVEFL 105
Q++ L
Sbjct: 105 LQIKML 110
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA RG ATD SL R RRE+I+ER+++LQ+LVP KV + +L+E +NY++ LQ Q
Sbjct: 274 TRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKV-DISTMLEEAVNYVKFLQTQ 332
Query: 102 VEFLSM 107
++ ++
Sbjct: 333 IKVCTI 338
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA RG ATD SL R RREKI+ER++ LQ+LVP KV + +L++ I+Y++ LQ Q+
Sbjct: 185 RANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKV-DISTMLEDAIHYVKFLQLQI 243
Query: 103 EFLS 106
+ LS
Sbjct: 244 KLLS 247
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA RG ATD S+ R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 207 TRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 265
Query: 102 VEFLS 106
++ LS
Sbjct: 266 IKLLS 270
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 9/77 (11%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
V +R +A H+ +ER RR+KI++RMKILQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 209 VSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 267
Query: 102 VEFLSMKLEAVNSRMNL 118
V + SRMN+
Sbjct: 268 VSMM--------SRMNM 276
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q+
Sbjct: 185 RASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKV-DISTMLEEAVQYVKFLQLQI 243
Query: 103 EFLS 106
+ LS
Sbjct: 244 KLLS 247
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+ER RR++I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKT-DKASMLDEAIEYLKMLQLQLQ 74
Query: 104 FLS 106
LS
Sbjct: 75 VLS 77
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RAR+G A D S+A R RRE+IS+R+KILQ+LVP KV +L++ INY++ LQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 103 E 103
+
Sbjct: 418 K 418
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 47/67 (70%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
VRA+RG AT S+AER RR +IS+R++ LQ++VP +K A +L+E + Y++ LQ
Sbjct: 166 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQ 225
Query: 100 RQVEFLS 106
+Q++ L+
Sbjct: 226 KQIQELT 232
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +IS+R+K LQDLVP +K + +LD ++YI+ L+ +
Sbjct: 281 VRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDR 340
Query: 102 VEFL 105
VE L
Sbjct: 341 VEKL 344
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 36 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K A +LD +
Sbjct: 200 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQ 259
Query: 94 YIQSLQRQVEFLSMKLE 110
+I+ LQ QV+ L ++E
Sbjct: 260 HIKGLQTQVQKLHKEME 276
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+ER RR++I+E+MK LQ+L+P NK KA +LDE I Y++ LQ Q++
Sbjct: 16 SKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKT-DKASMLDEAIEYLKMLQLQLQ 74
Query: 104 FLS 106
LS
Sbjct: 75 VLS 77
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E ++Y++ LQ Q+
Sbjct: 238 RASRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAVHYVKFLQLQI 296
Query: 103 EFLS 106
+ LS
Sbjct: 297 KLLS 300
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 14/101 (13%)
Query: 49 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 203
Query: 109 LEAVNSRMNLTPTIEGFHPKDL-GEQAFDATGMIFGSQTAR 148
+ M+L HP L G F M FG + R
Sbjct: 204 -----NGMSL-------HPMCLPGASQFSQIRMDFGGEENR 232
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y+++LQ Q
Sbjct: 178 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQ 237
Query: 102 VEFLS 106
++ L+
Sbjct: 238 IQELT 242
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP +K +A ++DEI++Y++ L+ Q
Sbjct: 150 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSKT-DRAAMIDEIVDYVKFLRLQ 208
Query: 102 VEFLSM 107
V+ LSM
Sbjct: 209 VKVLSM 214
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 3 TSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARRE 62
+SG +E+ S A E + A + + SSK + RA +G ATD SL R RRE
Sbjct: 187 SSGCCSEDESNASQELNGGASS--SLSSKGTTTLNSSGKTRASKGAATDPQSLYARKRRE 244
Query: 63 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
+I+ER++ILQ+LVP KV + +L+E + Y++ LQ Q++ LS
Sbjct: 245 RINERLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 287
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA RG ATD SL R RRE+I+ER+K LQ+LVP KV + +L+E ++Y++ LQ Q+
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 275
Query: 103 EFLS 106
+ LS
Sbjct: 276 KLLS 279
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q+
Sbjct: 248 RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKV-DISTMLEEAVQYVKFLQLQI 306
Query: 103 EFLS 106
+ LS
Sbjct: 307 KLLS 310
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+R +A + H+L+ER RR++I+E+MK LQ+L+P NK KA +LDE I+Y++SLQ QV+
Sbjct: 254 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKS-DKASMLDEAIDYLKSLQLQVQ 312
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQ 295
Query: 102 VEFLS 106
++ LS
Sbjct: 296 IKLLS 300
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKKLQLQVQ 210
Query: 104 FLSMK 108
LS +
Sbjct: 211 MLSAR 215
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R ++ + H+++E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 250
Query: 104 FLSMK 108
LSM+
Sbjct: 251 MLSMR 255
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 57 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+R RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 151 QRLRRERIAERMKSLQELVPNANKTD-KASMLDEIIDYVKFLQLQVKVLSM 200
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +LDE + Y++ LQ
Sbjct: 23 CRLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQ 82
Query: 100 RQV 102
+QV
Sbjct: 83 KQV 85
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+++ ++T+ H+L+ER RR++I+ERM+ LQ+L+P CNK KA +LDE I Y++SLQ Q++
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKA-DKASMLDEAIEYLKSLQLQLQ 483
Query: 104 FLSM 107
+SM
Sbjct: 484 IMSM 487
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R ++ + H+++E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 250
Query: 104 FLSMK 108
LSM+
Sbjct: 251 MLSMR 255
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 30 SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 89
SK SE RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+
Sbjct: 225 SKVSEALNSKGKARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLE 283
Query: 90 EIINYIQSLQRQVEFLS 106
E + Y++ LQ Q++ LS
Sbjct: 284 EAVQYVKFLQLQIKLLS 300
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQ 295
Query: 102 VEFLS 106
++ LS
Sbjct: 296 IKLLS 300
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 225
Query: 102 VEFLS 106
++ LS
Sbjct: 226 IKLLS 230
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +IS+R+K LQ L P +K A +LD + YI+ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381
Query: 102 VEFLS 106
V+ L+
Sbjct: 382 VQILT 386
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 173 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQ 232
Query: 100 RQVEFLS 106
++++ LS
Sbjct: 233 QKIQELS 239
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 23/80 (28%)
Query: 50 TDSHSLAERA----------------------RREKISERMKILQDLVPGCNKVIGKALV 87
TD HS+AER RRE+I+ERMK LQ+LVP NK KA +
Sbjct: 219 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKT-DKASM 277
Query: 88 LDEIINYIQSLQRQVEFLSM 107
LDEII+Y++ LQ QV+ LSM
Sbjct: 278 LDEIIDYVKFLQLQVKVLSM 297
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +IS+R+K LQ L P +K A +LD + YI+ LQ Q
Sbjct: 319 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 378
Query: 102 VEFLS 106
V+ L+
Sbjct: 379 VQILT 383
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + +L+E ++Y++ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 225
Query: 102 VEFLS 106
++ LS
Sbjct: 226 IKLLS 230
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 49 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV---EFL 105
+TD ++A R RRE+ISE++++LQ LVPG K + A +LDE NY++ L+ QV E L
Sbjct: 278 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKALENL 336
Query: 106 SMKLEAVNSRMNLTPTIEGFHPKDL 130
KL+ N + P+ FHP L
Sbjct: 337 RPKLDQTNLSFSSAPSFPLFHPSFL 361
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 23/80 (28%)
Query: 50 TDSHSLAERA----------------------RREKISERMKILQDLVPGCNKVIGKALV 87
TD HS+AER RRE+I+ERMK LQ+LVP NK KA +
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKT-DKASM 278
Query: 88 LDEIINYIQSLQRQVEFLSM 107
LDEII+Y++ LQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E + Y++ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-HISTMLEEAVQYVKFLQLQ 295
Query: 102 VEFLS 106
++ LS
Sbjct: 296 IKLLS 300
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 41 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
+ RA RG ATD SL R RRE+I+ER++ILQ LVP KV + +L+E Y++ LQ
Sbjct: 189 YTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAAQYVKFLQL 247
Query: 101 QVEFLS 106
Q++ LS
Sbjct: 248 QIKLLS 253
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 36 PKDYIHVRAR--RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + RAR RG AT S+AER RR +IS ++K LQ+LVP +K A +LD +
Sbjct: 223 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 282
Query: 94 YIQSLQRQVEFLSMKLE 110
+I+ LQ QVE L +E
Sbjct: 283 HIKGLQHQVESLEKGME 299
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 52/70 (74%), Gaps = 6/70 (8%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV------IGKALVLDEIINYIQS 97
+++ ++T+ H+L+ER RR++I+ERM+ LQ+L+P CNKV KA +LDE I Y++S
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEAIEYLKS 484
Query: 98 LQRQVEFLSM 107
LQ Q++ +SM
Sbjct: 485 LQLQLQIMSM 494
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 9/77 (11%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 265
Query: 102 VEFLSMKLEAVNSRMNL 118
V + SRMN+
Sbjct: 266 VSMM--------SRMNM 274
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 9/77 (11%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 265
Query: 102 VEFLSMKLEAVNSRMNL 118
V + SRMN+
Sbjct: 266 VSMM--------SRMNM 274
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 23/80 (28%)
Query: 50 TDSHSLAERA----------------------RREKISERMKILQDLVPGCNKVIGKALV 87
TD HS+AER RRE+I+ERMK LQ+LVP NK KA +
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKT-DKASM 278
Query: 88 LDEIINYIQSLQRQVEFLSM 107
LDEII+Y++ LQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 36 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD +
Sbjct: 257 PQDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 316
Query: 94 YIQSLQRQVEFLSMKLE 110
+I+ LQ QV+ L LE
Sbjct: 317 HIKGLQTQVQKLHEDLE 333
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 49 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
A + H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ L+M+
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTMR 246
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 12/93 (12%)
Query: 15 EVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 74
+ E SA GNK ++ ++ S RR +A + H+ +ER RR++I+E+M+ LQ L
Sbjct: 338 DTELKSADGNKASQRTRSS-----------RRNRAAEVHNQSERRRRDRINEKMRTLQQL 386
Query: 75 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+P NK KA +L+E I Y++SLQ Q++ + M
Sbjct: 387 IPNSNKT-DKASMLEEAIEYLKSLQFQLQVMWM 418
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
ARR ++H+L E+ RR KI +++K L+ LVPGC+ +A +LD+ I +I+SLQ+Q++
Sbjct: 19 ARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQTIQHIKSLQQQIQ 78
Query: 104 F----LSMKLEAV 112
+S+ +A+
Sbjct: 79 VQPKAISLGCDAI 91
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%)
Query: 40 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQ
Sbjct: 103 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQ 162
Query: 100 RQVEFLS 106
++++ LS
Sbjct: 163 QKIQELS 169
>gi|224058495|ref|XP_002299530.1| predicted protein [Populus trichocarpa]
gi|222846788|gb|EEE84335.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 52 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 111
SH+L+ER +REK+++R IL+ +VP +KV+ K +LDE I Y+Q L+R+VE L
Sbjct: 431 SHALSERKQREKLNKRFMILKSIVPSISKVVDKVSILDETIEYLQELERKVEELG----- 485
Query: 112 VNSRMNLTPTIEGFHPKDLGEQAFDATG 139
S L + P+D E+ D G
Sbjct: 486 --SNRELLEVLTKRKPQDTAERTSDNYG 511
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
H+L+ER RR+KI+E+++ L++L+P CNK + KA +LD+ I+Y+++L+ Q++ +SM
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNK-MDKASMLDDAIDYLKTLKLQLQIMSM 266
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
R A +H+L E+ RR KI+ER + LQ LVPGC+ +A LD+ I Y++SLQ Q+E
Sbjct: 79 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 138
Query: 105 LS 106
S
Sbjct: 139 TS 140
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
R +RG ATD S+ RARREKI+ER++ LQ L+P KV +LDE ++Y+Q L+RQV
Sbjct: 448 RVQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGKV-DIVTMLDEAVHYVQFLKRQV 506
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++
Sbjct: 250 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQMQLQ 308
Query: 104 FLSM 107
+ M
Sbjct: 309 VMWM 312
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
H+L+ER RR+KI+E+++ L++L+P CNK + KA +LD+ I+Y+++L+ Q++ +SM
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNK-MDKASMLDDAIDYLKTLKLQLQIMSM 266
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
V +R +A H+ +ER RR+KI++RMK LQ LVP NK KA +LDE+I Y++ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKT-DKASMLDEVIEYLKQLQAQ 345
Query: 102 VE 103
V+
Sbjct: 346 VQ 347
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
V +R +A H+ +ER RR+KI++RMK LQ LVP NK KA +LDE+I Y++ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKT-DKASMLDEVIEYLKQLQAQ 345
Query: 102 VE 103
V+
Sbjct: 346 VQ 347
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+ER RR++I+ERMK LQ+L+P NK KA +LDE I Y++ LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKT-DKASMLDEAIEYLKLLQHQLQ 62
Query: 104 FL 105
+
Sbjct: 63 VV 64
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
R+R+G A D S+A R RRE+IS+R+KILQDLVP +KV +L++ INY++ +Q Q+
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV-DLVTMLEKAINYVKFMQLQL 292
Query: 103 E 103
+
Sbjct: 293 Q 293
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 8/88 (9%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 112
H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR---- 199
Query: 113 NSRMNLTPTI--EGFHPKDLGEQAFDAT 138
+ ++L P EG P L + + +
Sbjct: 200 -NGLSLHPMCFPEGLQPLQLSQMGMELS 226
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA+RG ATD S+ R RRE+I+ER+K LQ LVP KV +L+E I+Y++ LQ QV
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAKV-DIVTMLEEAIHYVKFLQLQV 270
Query: 103 EFLS 106
LS
Sbjct: 271 NMLS 274
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
R A +H+L E+ RR KI+ER + LQ LVPGC+ +A LD+ I Y++SLQ Q+E
Sbjct: 192 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 251
Query: 105 LS 106
S
Sbjct: 252 TS 253
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 45/61 (73%), Gaps = 4/61 (6%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
R+R Q H+L ER RR+KI++RM+IL++L+P CNK KA +LD+ I Y+++L+ Q+
Sbjct: 749 RSRNAQV---HNLCERKRRDKINKRMRILKELIPNCNKT-DKASMLDDAIEYLKTLKLQI 804
Query: 103 E 103
+
Sbjct: 805 Q 805
>gi|413932893|gb|AFW67444.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 387
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 36 PKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 95
P D +HV R+G D RR++I E+M+ LQ+L+P CNK KA +LDE I Y+
Sbjct: 177 PSDSVHVHKRKGMCRDESDSRSERRRDRIKEKMRALQELIPHCNKT-DKASILDETIEYL 235
Query: 96 QSLQRQVEFLSM 107
+SLQ QV+ + M
Sbjct: 236 KSLQMQVQIMWM 247
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
R+R+G A D S+A R RRE+IS+R+KILQDLVP +KV +L++ INY++ +Q Q+
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV-DLVTMLEKAINYVKFMQLQL 292
Query: 103 E 103
+
Sbjct: 293 Q 293
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E Y++ LQ Q
Sbjct: 196 TRASRGGATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQ 254
Query: 102 VEFLS 106
++ LS
Sbjct: 255 IKLLS 259
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 36 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K A +LD +
Sbjct: 69 PEDSVPCKIRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDFAVQ 128
Query: 94 YIQSLQRQVEFLSMKLE 110
+I+ LQ +VE L ++E
Sbjct: 129 HIKGLQNEVEKLHKEME 145
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA++G A D S+A R RRE+IS+R+KILQ+L+P +KV +L++ INY++ LQ QV
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKV-DLVTMLEKAINYVKFLQLQV 467
Query: 103 EFL 105
+ L
Sbjct: 468 KVL 470
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
RR +A H+ +ER RR++I+++MK LQ LVP +K KA +LDE+I Y++ LQ QV+
Sbjct: 220 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQVQM 278
Query: 105 LSMK 108
+S++
Sbjct: 279 MSVR 282
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
RR +A H+ +ER RR++I+++MK LQ LVP +K KA +LDE+I Y++ LQ QV+
Sbjct: 182 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQVQM 240
Query: 105 LSMK 108
+S++
Sbjct: 241 MSVR 244
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 48 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L+M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 234
Query: 108 KLEAVNSRMNLTPTIEGFHPKDLGE 132
+ +N L HP L +
Sbjct: 235 R-NGINLHHPLCLPGTTLHPLQLSQ 258
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+L+ER RR++I+ERMK LQ+L+P NK KA +LDE I Y++ LQ Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKT-DKASMLDEAIEYLKLLQHQLQ 62
Query: 104 FLS 106
+
Sbjct: 63 VVC 65
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA++G A D S+A R RRE+IS+R+KILQ+L+P +KV +L++ INY++ LQ QV
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKV-DLVTMLEKAINYVKFLQLQV 467
Query: 103 EFL 105
+ L
Sbjct: 468 KVL 470
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++
Sbjct: 256 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQMQLQ 314
Query: 104 FLSM 107
+ M
Sbjct: 315 VMWM 318
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQV 311
Query: 105 LSM 107
+ M
Sbjct: 312 MWM 314
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK KA +LDE I Y++ LQ Q++
Sbjct: 592 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKT-DKASMLDEAIEYLKMLQLQLQM 650
Query: 105 LSMKLEAVNSRMNLTPTIEGFHPKDLG 131
+S++ M + P ++ +G
Sbjct: 651 MSIRTGMTLPPMVMPPGLQHMQMPQMG 677
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 322
Query: 102 VEFLS 106
V+ ++
Sbjct: 323 VQMMN 327
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ LSM+
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSMR 203
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 12/96 (12%)
Query: 10 NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMK 69
N + V S A GNK + S + RR +A + H+L+ER RR++I+ERMK
Sbjct: 230 NDTDESVSLSDAIGNKSNQRSGSN-----------RRSRAAEVHNLSERRRRDRINERMK 278
Query: 70 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
LQ+L+P C+K KA +LDE I+Y++SLQ Q++ +
Sbjct: 279 ALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQVM 313
>gi|414873438|tpg|DAA51995.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 146
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Query: 2 KTSGSKNENGS-KAEVEASSAAGNKPAESSKPS-EPPK-DYIHVRARRGQATDSHSLAER 58
KT+ S N GS + EVE S + K + P+ EPPK DYIHVRARRGQATDSHSLAER
Sbjct: 83 KTNKSSNNKGSLRTEVETDSRSAGKAVSKNIPAAEPPKQDYIHVRARRGQATDSHSLAER 142
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK KA +LDE I+Y++ LQ Q++
Sbjct: 730 TKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKT-DKASMLDEAIDYLKILQLQLQ 788
Query: 104 FLSMKLEAVNSRMNLTPTIEGFH-PKDLGEQAFDATGMI 141
+S++ M + P ++ P+ A + GM+
Sbjct: 789 MMSIRTGMTLPPMVMPPGLQHMQMPQMPQVAAMPSMGMV 827
>gi|297805516|ref|XP_002870642.1| hypothetical protein ARALYDRAFT_493847 [Arabidopsis lyrata subsp.
lyrata]
gi|297316478|gb|EFH46901.1| hypothetical protein ARALYDRAFT_493847 [Arabidopsis lyrata subsp.
lyrata]
Length = 637
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 50 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKL 109
T +H++ E+ RREK++ER IL+ ++P NK I K +LD+ I Y+Q L+R+V+ L
Sbjct: 439 TGNHAVLEKKRREKLNERFMILRSIIPSINK-IDKVSILDDTIEYLQELERRVQELESCR 497
Query: 110 EAVNSRMNLTPTIEGFHPKDLGEQA 134
E+ ++ T T++ P D GE+
Sbjct: 498 ESTDTETRGTMTMKRKKPCDAGERT 522
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 6/70 (8%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG------KALVLDEIINYI 95
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + + +LDE + Y+
Sbjct: 416 LRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYM 475
Query: 96 QSLQRQVEFL 105
+ LQ+QV+ L
Sbjct: 476 KFLQKQVDDL 485
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 12/96 (12%)
Query: 10 NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMK 69
N + V S A GNK + S + RR +A + H+L+ER RR++I+ERMK
Sbjct: 230 NHTDESVSLSDAIGNKSNQRSGSN-----------RRSRAAEVHNLSERRRRDRINERMK 278
Query: 70 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
LQ+L+P C+K KA +LDE I+Y++SLQ Q++ +
Sbjct: 279 ALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQVM 313
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 12/96 (12%)
Query: 10 NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMK 69
N + V S A GNK + S + RR +A + H+L+ER RR++I+ERMK
Sbjct: 230 NHTDESVSLSDAIGNKSNQRSGSN-----------RRSRAAEVHNLSERRRRDRINERMK 278
Query: 70 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
LQ+L+P C+K KA +LDE I+Y++SLQ Q++ +
Sbjct: 279 ALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQVM 313
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 36 PKDYIHVRAR--RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + RAR RG AT S+AER RR +IS ++K LQ+LVP +K A +LD +
Sbjct: 225 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 284
Query: 94 YIQSLQRQVE 103
+I+ LQ QVE
Sbjct: 285 HIKGLQHQVE 294
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 6/104 (5%)
Query: 6 SKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKIS 65
S+NE + + E+ E S PP+ ++R +A + H+L+E+ RR +I+
Sbjct: 101 SENETDHECDCESEEGLEALIDEMSVKPAPPRS-----SKRTRAAEVHNLSEKRRRSRIN 155
Query: 66 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKL 109
E+MK LQ+L+P +K KA +LDE I Y++ LQ QV+ LS++
Sbjct: 156 EKMKALQNLIPNSSKT-DKASMLDEAIEYLKLLQLQVQGLSVRF 198
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISERM+ LQ+L P +K A LD I I+ LQ+Q
Sbjct: 336 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQKQ 395
Query: 102 VEFLS 106
V+ L+
Sbjct: 396 VKSLA 400
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 36 PKDYIHVRAR--RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + RAR RG AT S+AER RR +IS ++K LQ+LVP +K A +LD +
Sbjct: 223 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 282
Query: 94 YIQSLQRQVE 103
+I+ LQ QVE
Sbjct: 283 HIKGLQHQVE 292
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ L+M+
Sbjct: 128 HNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTMR 182
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 12/96 (12%)
Query: 10 NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMK 69
N + V S A GNK + S + RR +A + H+L+ER RR++I+ERMK
Sbjct: 209 NHTDESVSLSDAIGNKSNQRSGSN-----------RRSRAAEVHNLSERRRRDRINERMK 257
Query: 70 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
LQ+L+P C+K KA +LDE I+Y++SLQ Q++ +
Sbjct: 258 ALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQVM 292
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 9/88 (10%)
Query: 48 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 108 KLEAVNSRMNLTP-TIEG--FHPKDLGE 132
+ + +NL P + G HP L +
Sbjct: 256 R-----NGINLHPLCLPGTTLHPLQLSQ 278
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 51 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL-SMKL 109
D S+A R RRE+ISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ FL S
Sbjct: 127 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRFLQSTPP 185
Query: 110 EAVNSRMNLTPTIEGFHP 127
+N + P E + P
Sbjct: 186 PPINCNVGAAPNSEYYWP 203
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
RA RG ATD SL R RRE+I+ER+KILQ +VP KV + +L+E ++Y++ LQ Q
Sbjct: 270 TRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTKV-DISTMLEEAVHYVKFLQLQ 328
Query: 102 VE 103
++
Sbjct: 329 IK 330
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 57/90 (63%), Gaps = 7/90 (7%)
Query: 16 VEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 75
E+ A G+ +ES +P+ P + R +R +A + H+L+E+ RR +I+E+MK LQ L+
Sbjct: 6 CESEEALGS--SESEQPTRPARP----RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLI 59
Query: 76 PGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
P +K KA +LD+ I Y++ LQ QV+ +
Sbjct: 60 PNSSKT-DKASMLDDAIEYLKQLQLQVQMI 88
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQ 310
Query: 104 FLSM 107
+ M
Sbjct: 311 VMWM 314
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
H+L+E+ RR +I+E+MK LQ+L+P NK KA +LDE I Y++ LQ QV+ LS++
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLSLR 170
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQ 310
Query: 104 FLSM 107
+ M
Sbjct: 311 VMWM 314
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQ 310
Query: 104 FLSM 107
+ M
Sbjct: 311 VMWM 314
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 36 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + +RA+RG AT S+AER RR +IS ++K LQ+LVP +K + +LD +
Sbjct: 284 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQ 343
Query: 94 YIQSLQRQVEFLSMKLE 110
+I+ LQ Q++ L+ ++E
Sbjct: 344 HIKGLQNQIQKLNKEVE 360
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 60 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT 119
RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+ +SM M L
Sbjct: 12 RRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQMMSMGSGLCIPPMLLP 70
Query: 120 PTIE 123
P ++
Sbjct: 71 PAMQ 74
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 12 SKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKIL 71
S A +E + A PA PP RA A D SL R RRE+I+ER++IL
Sbjct: 241 SNAYLEPNGGASKDPA-------PPNLDRKSRATTSAAADPQSLYARKRRERINERLRIL 293
Query: 72 QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
Q+LVP KV + +L+E + Y++ LQ Q++ LS
Sbjct: 294 QNLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 327
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
R +R +A + H+L+ER RR++I+E+M+ LQ+L+P NK KA +LDE I Y++ LQ Q
Sbjct: 11 TRPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNKT-DKASMLDEAIEYLKMLQLQ 69
Query: 102 VEFLSMKL 109
++ ++L
Sbjct: 70 LQVPKIEL 77
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +ISE+++ LQDLVP +K A +LD + +I+ LQ +
Sbjct: 262 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTADMLDLAVEHIKGLQSE 321
Query: 102 VEFLSMKLE 110
++ L + E
Sbjct: 322 LQALKHEQE 330
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 9/88 (10%)
Query: 48 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
+A + H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 108 KLEAVNSRMNLTPTI---EGFHPKDLGE 132
+ + +NL P HP L +
Sbjct: 256 R-----NGINLHPLCLPGTTLHPLQLSQ 278
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RA+RG AT S+AER RR +ISE++K L+ L P +K A +LD + YI+ LQ Q
Sbjct: 167 IRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQEQ 226
Query: 102 VEFLS 106
V+ L+
Sbjct: 227 VKTLT 231
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K A +LD +++I+ LQ +
Sbjct: 143 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQNE 202
Query: 102 VEFLSMKLEAVNSRMN 117
++ L E + R N
Sbjct: 203 LQALKKDKEKCSCRGN 218
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +ISE+++ LQ+LVP +K A +LD + +I+ LQ Q
Sbjct: 141 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 200
Query: 102 VEFL 105
++ L
Sbjct: 201 LQAL 204
>gi|414876673|tpg|DAA53804.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 310
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 59 ARREKISERMKIL--QDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
AR I ++M ++ ++ + +V+G A++L EIINY+QSLQRQVEF+SMKL VN ++
Sbjct: 160 ARLLDIHDKMMLINNKETLDFSFQVVGNAVMLGEIINYVQSLQRQVEFMSMKLATVNPQV 219
Query: 117 NLTPTIEGFHPKD 129
+L ++ PKD
Sbjct: 220 DLN-SLPNVLPKD 231
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 60 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 142 RRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 188
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA RG AT+ SL R RRE+I+ER++ILQ+LVP KV + +L+E Y++ LQ Q+
Sbjct: 195 RASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAAQYVKFLQLQI 253
Query: 103 EFLSM 107
+ LS
Sbjct: 254 KLLSC 258
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
+RR +A H+ +ER RR++I+++MK LQ LVP +K KA +LDE+I Y++ LQ QV+
Sbjct: 243 SRRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIEYLKQLQAQVQ 301
Query: 104 FLSMK 108
+S++
Sbjct: 302 AMSVR 306
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 36 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD +
Sbjct: 275 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 334
Query: 94 YIQSLQRQVEFL 105
+I+ LQ Q++ L
Sbjct: 335 HIKGLQHQLQNL 346
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 36 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD +
Sbjct: 275 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 334
Query: 94 YIQSLQRQVEFL 105
+I+ LQ Q++ L
Sbjct: 335 HIKGLQHQLQNL 346
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K + +LD +++I+ LQ Q
Sbjct: 285 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 344
Query: 102 VEFL 105
++ L
Sbjct: 345 LQTL 348
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 36 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + +RA+RG AT S+AER RR +IS ++K LQ+LVP +K + +LD +
Sbjct: 284 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQ 343
Query: 94 YIQSLQRQVEFL 105
+I+ LQ Q++ L
Sbjct: 344 HIKGLQNQIQVL 355
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 36 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD +
Sbjct: 266 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 325
Query: 94 YIQSLQRQVEFL 105
+I+ LQ Q++ L
Sbjct: 326 HIKGLQHQLQNL 337
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +ISE+++ LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 241 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKGLQSQ 300
Query: 102 VEFLSMKLE 110
++ +MK E
Sbjct: 301 LQ--AMKHE 307
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 36 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD +
Sbjct: 270 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 329
Query: 94 YIQSLQRQVEFL 105
+I+ LQ Q++ L
Sbjct: 330 HIKGLQHQLQNL 341
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 49 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV---EFL 105
+TD ++A R RRE+ISE++++LQ LVPG K + A +LDE NY++ L+ QV E L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKALENL 334
Query: 106 SMKLEAVNSRMNLTPT-IEGFHPKDLGEQ 133
KL+ N + PT FHP L Q
Sbjct: 335 RPKLDQTNLSFSSAPTSFPLFHPSFLPLQ 363
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 108
HSL+ER RR+KI+++M+ LQ L+P +KV KA +LD+ I Y+++LQ Q++ +SM+
Sbjct: 385 HSLSERKRRDKINKKMRALQALIPNSDKV-DKASMLDKAIEYLKTLQLQLQMMSMR 439
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A H L+ER RR+KI+E MK LQ+L+P C K ++ +LD++I Y++SLQ Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQIQ 331
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K A +LD +++I+ LQ +
Sbjct: 146 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQSE 205
Query: 102 VEFLSMKLEAVNSRMN 117
++ L E R N
Sbjct: 206 LQALKEDKEKCTCRGN 221
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 12/91 (13%)
Query: 17 EASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVP 76
E SA GNK A S S RR +A + H+L+ER RRE+I+E+MK LQ+L+P
Sbjct: 331 ELESAEGNKTAPRSGSS-----------RRTRAAEVHNLSERRRRERINEKMKALQELIP 379
Query: 77 GCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
CNK KA +LDE I Y++SLQ Q++ + M
Sbjct: 380 HCNKT-DKASMLDEAIEYLKSLQLQLQVMWM 409
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 36 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
P+D + RA+RG AT S+AER RR +IS ++K LQ+LVP +K A +LD +
Sbjct: 225 PEDSVPCKARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 284
Query: 94 YIQSLQRQVE 103
+I+ LQ QVE
Sbjct: 285 HIKGLQHQVE 294
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 49 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV---EFL 105
+TD ++A R RRE+ISE++++LQ LVPG K + A +LDE NY++ L+ QV E L
Sbjct: 305 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKALENL 363
Query: 106 SMKLEAVNSRMNLTPT-IEGFHPKDLGEQ 133
KL+ N + PT FHP L Q
Sbjct: 364 RPKLDQTNLSFSSAPTSFPLFHPSFLPLQ 392
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 51 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
D S+A R RRE+ISERM+ILQ LVPG K + A +LDE I+Y++ L++QV+ L
Sbjct: 166 DPQSVAARHRRERISERMRILQRLVPGGTK-MDTASMLDEAIHYVKFLKKQVQSL 219
>gi|414876674|tpg|DAA53805.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 149
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 80 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 129
+V+G A++L EIINY+QSLQRQVEF+SMKL VN +++L ++ PKD
Sbjct: 33 QVVGNAVMLGEIINYVQSLQRQVEFMSMKLATVNPQVDLN-SLPNVLPKD 81
>gi|406862693|gb|EKD15742.1| helix-loop-helix DNA-binding domain-containing protein [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 382
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 52 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 111
+HSL ER RR K++E IL+D++P C + K +L I+Y+ R +E KL+A
Sbjct: 161 AHSLIERRRRSKMNEEFGILKDMIPACTGEMHKLAILQASIDYV----RYLEDCVAKLKA 216
Query: 112 VNSRMNLTPTIE 123
N+R N TPT E
Sbjct: 217 ENNRTNATPTAE 228
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + +L+E ++Y++ LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 226
Query: 103 E 103
+
Sbjct: 227 K 227
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
H+ +ER RR++I+E++K LQ+L+P C K K +LDE I+Y++SLQ Q++ L M
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTKT-DKVSMLDEAIDYLKSLQLQLQMLVM 71
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 49 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV---EFL 105
+TD ++A R RRE+ISE++++LQ LVPG K + A +LDE NY + L+ QV E L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYFKFLRAQVKALENL 334
Query: 106 SMKLEAVNSRMNLTPT-IEGFHPKDLGEQ 133
KL+ N + PT FHP L Q
Sbjct: 335 RPKLDQTNLSFSSAPTSFPLFHPSFLPLQ 363
>gi|297742516|emb|CBI34665.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 6/78 (7%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
R + T +H L+ER RREKI+ER +L+ LVP N+V K VLD+ I Y++ L+R+V
Sbjct: 335 RPEADEITLNHVLSERKRREKINERFSVLRSLVPSINQV-NKVSVLDDTIEYLKELKRRV 393
Query: 103 EFL-----SMKLEAVNSR 115
E L S ++EA SR
Sbjct: 394 EELESSKESTEIEARTSR 411
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
Query: 3 TSGSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARRE 62
TS +++ S A +E SA G+ A++ +P RA R T+ S+ R RRE
Sbjct: 195 TSCCTSDSDSNASLE--SADGDGDADARRPKG------KGRAGRSATTEPQSIYARKRRE 246
Query: 63 KISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
+I+ER+KILQ+LVP KV + +L+E ++Y++ LQ Q+ LS
Sbjct: 247 RINERLKILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQIRLLS 289
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 11 GSKAEVEASSAAGNK---PAESSKPSEPPKDYIHVRARRGQAT---DSHSLAERARREKI 64
GS+ E + +AGNK ES++PS+ + + + T D SLA + RRE+I
Sbjct: 158 GSRNESLSPKSAGNKRSHTGESTQPSKKLSSGVTGKTKPKPTTSPKDPQSLAAKNRRERI 217
Query: 65 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
SER+KILQ+LVP KV +L++ I+Y++ LQ QV+ L+
Sbjct: 218 SERLKILQELVPNGTKV-DLVTMLEKAISYVKFLQVQVKVLA 258
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +ISE+++ LQ LVP +K + +LD +++I+ LQ Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 102 VEFL 105
++ L
Sbjct: 194 LQTL 197
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 29 SSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 88
S K E PK RA ATD+ S+ R RRE+I+ER++ILQ LVP KV + +L
Sbjct: 183 SPKEHEAPKLGRKSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTKV-DISTML 241
Query: 89 DEIINYIQSLQRQVEFLS 106
+E + Y++ LQ Q++ LS
Sbjct: 242 EEAVQYVKFLQLQIKLLS 259
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKS-DKASMLDEVIEYLKQLQAQ 322
Query: 102 VEFLS 106
++ ++
Sbjct: 323 LQMIN 327
>gi|359474203|ref|XP_002270239.2| PREDICTED: transcription factor GLABRA 3-like [Vitis vinifera]
Length = 633
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 6/78 (7%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
R + T +H L+ER RREKI+ER +L+ LVP N+V K VLD+ I Y++ L+R+V
Sbjct: 425 RPEADEITLNHVLSERKRREKINERFSVLRSLVPSINQV-NKVSVLDDTIEYLKELKRRV 483
Query: 103 EFL-----SMKLEAVNSR 115
E L S ++EA SR
Sbjct: 484 EELESSKESTEIEARTSR 501
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 18/114 (15%)
Query: 22 AGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 81
AG +PA SS+ S+P + + + ++D ++A R RRE++SER+++LQ LVPG ++
Sbjct: 271 AGTEPAPSSQ-SKPRRKNVRI------SSDPQTVAARLRRERVSERLRVLQRLVPGGSR- 322
Query: 82 IGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAF 135
+ A +LDE +Y++ L+ QV+ LE N P+ G+H L Q++
Sbjct: 323 MDTASMLDEAASYLKFLKTQVK----ALERAN------PSNGGYHNSSLLPQSY 366
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
++R +A + H+ +ER RR++I+E+M+ LQ L+P NK KA +L+E I Y++SLQ Q++
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKT-DKASMLEEAIEYLKSLQFQLQ 414
Query: 104 FLSM 107
+ M
Sbjct: 415 VMWM 418
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 112
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L++
Sbjct: 94 HNLSEKRRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAVMNGLG 152
Query: 113 NSRMNLTPTIEGFH 126
+ M L P + H
Sbjct: 153 LNPMRLPPVLPPTH 166
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA+RG ATD S+ R RREKI+ER+K LQ LVP +V +L+E I++++ L+ Q+
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQV-DIVTMLEEAIHFVKFLEFQL 529
Query: 103 EFL 105
E L
Sbjct: 530 ELL 532
>gi|22327493|ref|NP_680372.1| transcription factor GLABRA 3 [Arabidopsis thaliana]
gi|75309232|sp|Q9FN69.1|GL3_ARATH RecName: Full=Transcription factor GLABRA 3; AltName: Full=Basic
helix-loop-helix protein 1; Short=AtMYC6; Short=AtbHLH1;
Short=bHLH 1; AltName: Full=Protein SHAPESHIFTER;
AltName: Full=Transcription factor EN 31; AltName:
Full=bHLH transcription factor bHLH001
gi|9758040|dbj|BAB08503.1| bHLH transcription factor-like protein [Arabidopsis thaliana]
gi|17224395|gb|AAL36964.1| bHLH-transcription factor [Arabidopsis thaliana]
gi|332007281|gb|AED94664.1| transcription factor GLABRA 3 [Arabidopsis thaliana]
Length = 637
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 50 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKL 109
T +H++ E+ RREK++ER L+ ++P NK I K +LD+ I Y+Q L+R+V+ L
Sbjct: 439 TGNHAVLEKKRREKLNERFMTLRKIIPSINK-IDKVSILDDTIEYLQELERRVQELESCR 497
Query: 110 EAVNSRMNLTPTIEGFHPKDLGEQA 134
E+ ++ T T++ P D GE+
Sbjct: 498 ESTDTETRGTMTMKRKKPCDAGERT 522
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
H+ +ER RR++I+E++K LQ+L+P C K K +LDE I+Y++SLQ Q++ L M
Sbjct: 22 HNFSERRRRDRINEKLKALQELLPNCTKT-DKVSMLDEAIDYLKSLQIQLQMLVM 75
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
VRA+RG AT S+AER RR +ISE+++ LQ+LVP +K A +LD + +I+ LQ Q
Sbjct: 27 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 86
Query: 102 VEFL 105
++ L
Sbjct: 87 LQAL 90
>gi|297606863|ref|NP_001059108.2| Os07g0193800 [Oryza sativa Japonica Group]
gi|255677582|dbj|BAF21022.2| Os07g0193800, partial [Oryza sativa Japonica Group]
Length = 112
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 1 MKTSGSKNENGSKAEVEASSAAGNKPAESSK---PSEPPK-DYIHVRARRGQATDSHSLA 56
+K S ++N S EA + +GN + K P EPPK DYIHVRARRGQATDSHSLA
Sbjct: 36 LKPMKSSDKNDS-LRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLA 94
Query: 57 ER 58
ER
Sbjct: 95 ER 96
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
+A R AT+S SL R RRE+I+ER++ILQ+LVP KV + +L+E + Y++ LQ Q+
Sbjct: 211 KADRRSATESQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVEYVKFLQLQI 269
Query: 103 EFLS 106
+ LS
Sbjct: 270 KLLS 273
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 47 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
G ATD S+ R RREKI+ER+K LQ+LVP KV +LDE I+Y++ LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAKV-DIVTMLDEAIHYVKFLQNQVELL 58
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 47 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
G ATD S+ RARREKI+ER++ LQ L+P KV +LDE ++Y+Q L+RQV L
Sbjct: 1 GSATDPQSVHARARREKIAERLRKLQHLIPNGGKV-DIVTMLDEAVHYVQFLKRQVTLL 58
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
RA+RG ATD S+ R RRE+I+ER++ LQ LVP KV +L+E INY++ LQ Q+
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAKV-DIVTMLEEAINYVKFLQLQL 296
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 47 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
G ATD S+ R RREKI+ER+K LQ+LVP KV +LDE I+Y++ LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAKV-DIVTMLDEAIHYVKFLQTQVELL 58
>gi|224071909|ref|XP_002303592.1| predicted protein [Populus trichocarpa]
gi|222841024|gb|EEE78571.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 14/91 (15%)
Query: 52 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK--- 108
SH L+ER RREK+++R IL+ +VP +KV K +LD+ I Y+Q L+R+VE L +
Sbjct: 428 SHVLSERRRREKLNKRFMILKSIVPSISKV-DKVSILDDTIQYLQELERKVEELECRREL 486
Query: 109 LEAVNSRMNLTPTIEGFHPKDLGEQAFDATG 139
LEA+ R P+D E+ D G
Sbjct: 487 LEAITKR----------KPEDTVERTSDNCG 507
>gi|4678267|emb|CAB41175.1| putative protein [Arabidopsis thaliana]
Length = 137
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 83 GKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT-PTIEGFHPKDLGEQAFDATGM 140
G ALVLDEIIN++QSLQRQVE LSM+L AVN R++ TI L + +F+A M
Sbjct: 3 GTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNAAPM 61
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 8/80 (10%)
Query: 49 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV---EFL 105
+TD ++A R RRE+ISE++++LQ LVPG +K + A +LDE NY++ L+ QV E L
Sbjct: 339 STDPQTVAARHRRERISEKIRVLQKLVPGGSK-MDTASMLDEAANYLKFLRSQVKALESL 397
Query: 106 SMKLEAVNSRMNLTPTIEGF 125
K++A MN PT F
Sbjct: 398 GNKVDA----MNCPPTSIAF 413
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 60 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKL 109
RR KI+ER+K LQ LVPGC+K +A LD+ I+Y++SLQ QV+ +S+ L
Sbjct: 225 RRHKINERLKTLQQLVPGCSKS-NQASTLDQTIHYMKSLQHQVQAMSVGL 273
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 51 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
D S+A R RRE+ISER+KILQ LVPG K + A +LDE I+Y++ L++QV+ L
Sbjct: 139 DPQSVAARHRRERISERIKILQRLVPGGTK-MDTASMLDEAIHYVKFLKKQVQTL 192
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L++
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYMKQLQLQVQTLAV 150
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 47 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
G ATD S+ R RREKI+ER+K LQ LVP KV +LDE I+Y+Q LQ QV L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQHLVPNGAKV-DIVTMLDEAIHYVQFLQLQVTLL 58
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+A +G ATD SL R RRE+I +R++ILQ+LVP KV + +L+E + Y++ LQ Q
Sbjct: 240 TKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQ 298
Query: 102 VEFLS 106
+ LS
Sbjct: 299 NKLLS 303
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 47 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
GQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ QV+ LS
Sbjct: 127 GQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLS 185
Query: 107 M 107
M
Sbjct: 186 M 186
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 51 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
D S+A R RRE+ISE+++ILQ LVPG K + A +LDE I Y++ L+RQ+ L
Sbjct: 118 DPQSIAARLRRERISEKIRILQRLVPGGTK-MDTASMLDEAIRYVKFLKRQIRLL 171
>gi|300394152|gb|ADK11703.1| enhancer of glabra 3 [Brassica rapa subsp. rapa]
Length = 597
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 47 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
G T +H+L+ER RREK+++R L+ ++P +K I K +LD+ I Y+Q LQR+V+ L
Sbjct: 404 GDETANHALSERKRREKLNDRFMTLRSMIPSISK-IDKVSILDDTIEYLQELQRRVQELE 462
Query: 107 MKLEAVNSRMNL 118
E+ ++ M +
Sbjct: 463 SCRESTDTEMRM 474
>gi|242084062|ref|XP_002442456.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
gi|241943149|gb|EES16294.1| hypothetical protein SORBIDRAFT_08g020280 [Sorghum bicolor]
Length = 219
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
R ++HSL E+ RR KI E++K LQ LVPGC +A LD+ I YI+SLQ+ +
Sbjct: 159 RSHHHAEAHSLTEKRRRLKIKEKLKTLQQLVPGCPNNSNQASTLDQTIRYIKSLQQHI 216
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 51 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
D S+A R RRE+ISE+++ILQ LVPG K + A +LDE I+Y++ L+RQ+ L
Sbjct: 134 DPQSVAARHRRERISEKIRILQRLVPGGTK-MDTASMLDEAIHYVKFLKRQIRLL 187
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 42 VRAR-RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
VR R R H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ
Sbjct: 97 VRTRQRSIDAKFHNLSEKRRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQL 155
Query: 101 QVEFLSM 107
QV+ L++
Sbjct: 156 QVQALAV 162
>gi|255563356|ref|XP_002522681.1| hypothetical protein RCOM_0886600 [Ricinus communis]
gi|223538157|gb|EEF39768.1| hypothetical protein RCOM_0886600 [Ricinus communis]
Length = 77
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 38/58 (65%), Gaps = 7/58 (12%)
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRM--NLTPTI--EGFHPKDLGEQAFDATGM 140
+LDEIINY+QSLQRQVEFLSMKL AVN R+ N+ I E F P F A GM
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNINNLIAKETFPP---CPTNFPAIGM 55
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 53 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L++
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 150
>gi|145712853|gb|ABP96466.1| phytochrome interacting factor 4 [Arabidopsis lyrata subsp.
petraea]
Length = 250
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 45 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K KA +LD I+Y++SL
Sbjct: 199 RRSRAAEVHNLSER-RRDRINERMKALQELIPHCSKT-DKASILDGAIDYMKSL 250
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 42 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
+RARRG AT S+AER RR KISE +K L DLVP +K A +L+ + Y++ L+ +
Sbjct: 557 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 616
Query: 102 VE 103
+E
Sbjct: 617 IE 618
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 44 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
A+R +A + H+ +ER RR++I+E+M+ LQ+L+P NK KA +LDE I Y++ LQ Q++
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKT-DKASMLDEAIEYLKMLQLQLQ 77
Query: 104 FLSM 107
++
Sbjct: 78 VCAV 81
>gi|223942973|gb|ACN25570.1| unknown [Zea mays]
gi|413951549|gb|AFW84198.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 156
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 87 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
+LDEIINY+QSLQRQVEFLSMKL VN +++ PKD+
Sbjct: 1 MLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNSLPNLLLPKDI 44
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 43 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
++ G A D S+A + RRE+ISER+K+LQDLVP +KV +L++ I+Y++ LQ QV
Sbjct: 232 KSAAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSKV-DLVTMLEKAISYVKFLQLQV 290
Query: 103 EFLS 106
+ L+
Sbjct: 291 KVLA 294
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 49 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E ++Y++ LQ Q++ LS
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAMHYVKFLQLQIKLLS 284
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%), Gaps = 4/68 (5%)
Query: 49 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV---EFL 105
+TD ++A R RRE+IS+R+++LQ +VPG +K + A +LDE NY++ L+ QV E L
Sbjct: 205 STDPQTVAARQRRERISDRIRVLQGMVPGGSK-MDTASMLDEAANYLKFLRSQVKALENL 263
Query: 106 SMKLEAVN 113
KL++VN
Sbjct: 264 GHKLDSVN 271
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 49 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
ATD SL R RRE+I+ER+KILQ+LVP KV + +L+E ++Y++ LQ Q++ LS
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAMHYVKFLQLQIKLLS 284
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 51 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
D S+A R RRE+ISER+++LQ LVPG K + A +LDE I YI+ L+RQV+ L
Sbjct: 162 DPQSVAARHRRERISERVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQEL 215
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 8/80 (10%)
Query: 49 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV---EFL 105
+TD ++A R RRE+I+E++++LQ LVPG +K + A +LDE NY++ L+ QV E L
Sbjct: 341 STDPQTVAARHRRERINEKIRVLQKLVPGGSK-MDTASMLDEAANYLKFLRSQVKALESL 399
Query: 106 SMKLEAVNSRMNLTPTIEGF 125
K++A MN PT F
Sbjct: 400 GNKVDA----MNCPPTSIAF 415
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 51 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
D S+A R RRE+ISER+++LQ LVPG K + A +LDE I YI+ L+RQV+ L
Sbjct: 162 DPQSVAARHRRERISERVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQEL 215
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 51 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
D S+A R RRE+ISER+++LQ LVPG K + A +LDE I YI+ L+RQV+ L
Sbjct: 161 DPQSVAARHRRERISERVRVLQRLVPGGTK-MDTASMLDEAIRYIKFLKRQVQEL 214
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 47 GQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
G A D S+A + RRE+ISER+K+LQDLVP +KV +L++ I+Y++ LQ QV+ L+
Sbjct: 232 GPAKDPQSIAAKNRRERISERLKMLQDLVPNGSKV-DLVTMLEKAISYVKFLQLQVKVLA 290
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 50 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
TD SL R RREKI+ER+K+LQ+LVP KV + +L+E ++YI+ +Q Q++ LS
Sbjct: 254 TDPQSLYARKRREKINERLKVLQNLVPNGTKV-DISTMLEEAVHYIKFMQLQIKLLS 309
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.127 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,490,012,528
Number of Sequences: 23463169
Number of extensions: 91043970
Number of successful extensions: 295193
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1841
Number of HSP's successfully gapped in prelim test: 2270
Number of HSP's that attempted gapping in prelim test: 291999
Number of HSP's gapped (non-prelim): 4218
length of query: 171
length of database: 8,064,228,071
effective HSP length: 131
effective length of query: 40
effective length of database: 9,285,520,228
effective search space: 371420809120
effective search space used: 371420809120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 71 (32.0 bits)