BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 030782
         (171 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
           SV=1
          Length = 281

 Score =  197 bits (500), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 99/147 (67%), Positives = 108/147 (73%), Gaps = 1/147 (0%)

Query: 25  KPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 84
           K  E     EPPKDYIHVRARRGQATD HSLAERARREKISE+M  LQD++PGCNK+IGK
Sbjct: 136 KATEQKNKPEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGK 195

Query: 85  ALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGS 144
           ALVLDEIINYIQSLQRQVEFLSMKLE VNS  +  PTI  F   DLG    D    I+  
Sbjct: 196 ALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTIGVFPSGDLGTLPIDVHRTIYEQ 255

Query: 145 QTAREYAQGSQQDWLHMQVGGSFERAT 171
           Q A E  + SQ +WLHMQV G+F R T
Sbjct: 256 QEANE-TRVSQPEWLHMQVDGNFNRTT 281


>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
          Length = 343

 Score =  182 bits (463), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 94/118 (79%), Positives = 100/118 (84%), Gaps = 5/118 (4%)

Query: 13  KAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 72
           KAE E+    G +  +  +  EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQ
Sbjct: 110 KAEAES---LGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQ 166

Query: 73  DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
           DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN  P IE F PK++
Sbjct: 167 DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEV 222


>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
           SV=1
          Length = 371

 Score =  165 bits (417), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 83/119 (69%), Positives = 93/119 (78%), Gaps = 7/119 (5%)

Query: 5   GSKNENGSKAEVEASSAAGNKPAES-------SKPSEPPKDYIHVRARRGQATDSHSLAE 57
           GSK    SK +V  SS  G +  +S       +KP E PKDYIHVRARRGQATDSHSLAE
Sbjct: 147 GSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAE 206

Query: 58  RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 116
           RARREKISERM +LQDLVPGCN++ GKA++LDEIINY+QSLQRQVEFLSMKL  VN RM
Sbjct: 207 RARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 265


>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
           SV=1
          Length = 498

 Score =  164 bits (415), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 74/87 (85%), Positives = 81/87 (93%)

Query: 27  AESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
           + ++KP EPPKDYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGCNKV GKAL
Sbjct: 286 SNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKAL 345

Query: 87  VLDEIINYIQSLQRQVEFLSMKLEAVN 113
           +LDEIINY+QSLQRQVEFLSMKL +VN
Sbjct: 346 MLDEIINYVQSLQRQVEFLSMKLSSVN 372


>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
           SV=1
          Length = 456

 Score =  160 bits (404), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 83/91 (91%)

Query: 28  ESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 87
           + +K  +P KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+
Sbjct: 244 DKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 303

Query: 88  LDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
           LDEIINY+QSLQRQVEFLSMKL +VN+R++ 
Sbjct: 304 LDEIINYVQSLQRQVEFLSMKLSSVNTRLDF 334


>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
           SV=1
          Length = 486

 Score =  157 bits (397), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 76/98 (77%), Positives = 84/98 (85%), Gaps = 3/98 (3%)

Query: 33  SEPPKD-YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 91
           S+PPKD YIHVRARRGQAT+SHSLAER RREKISERMK LQDLVPGCNKV GKA++LDEI
Sbjct: 293 SDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 352

Query: 92  INYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKD 129
           INY+QSLQRQVEFLSMKL  VN +M+    +EG   KD
Sbjct: 353 INYVQSLQRQVEFLSMKLATVNPQMDF--NLEGLLAKD 388


>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
           PE=2 SV=1
          Length = 286

 Score =  149 bits (375), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/113 (69%), Positives = 87/113 (76%), Gaps = 5/113 (4%)

Query: 2   KTSGSK--NENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERA 59
           KT G K  N N SK  VE   +   K    SK  EPP DYIHVRARRGQATDSHSLAER 
Sbjct: 97  KTRGRKARNSNNSKEGVEGRKSKKQK--RGSK-EEPPTDYIHVRARRGQATDSHSLAERV 153

Query: 60  RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAV 112
           RREKISERM+ LQ+LVPGC+KV GKAL+LDEIINY+Q+LQ QVEFLSMKL ++
Sbjct: 154 RREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSI 206


>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
           SV=1
          Length = 366

 Score =  145 bits (365), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/104 (69%), Positives = 87/104 (83%), Gaps = 3/104 (2%)

Query: 28  ESSKPSEPPK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 86
           ESS+  E PK +YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA+
Sbjct: 191 ESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 250

Query: 87  VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 130
           +LDEIINY+QSLQ+QVEFLSMKL  VN  +N+   I+    KDL
Sbjct: 251 MLDEIINYVQSLQQQVEFLSMKLATVNPEINI--DIDRILAKDL 292


>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
           SV=1
          Length = 390

 Score =  144 bits (364), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 88/111 (79%), Gaps = 1/111 (0%)

Query: 9   ENGSKAEVEASSAAGNKPAESSKPSEPPKD-YIHVRARRGQATDSHSLAERARREKISER 67
           E+  + + ++ ++  NK     +PS+  KD YIH+RARRGQAT+SHSLAER RREKISER
Sbjct: 189 EDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISER 248

Query: 68  MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
           MK LQDLVPGC+KV GKA++LDEIINY+QSLQ Q+EFLSMKL AVN  ++ 
Sbjct: 249 MKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDF 299


>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
           SV=1
          Length = 335

 Score =  143 bits (360), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 65/78 (83%), Positives = 71/78 (91%)

Query: 38  DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 97
           DYIHVRARRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+QS
Sbjct: 168 DYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQS 227

Query: 98  LQRQVEFLSMKLEAVNSR 115
           LQRQ+EFLSMKL  VN R
Sbjct: 228 LQRQIEFLSMKLAIVNPR 245


>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
           SV=3
          Length = 337

 Score =  142 bits (357), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/118 (63%), Positives = 84/118 (71%), Gaps = 12/118 (10%)

Query: 13  KAEVEAS----SAAGNKPAESSKPSEPPK--------DYIHVRARRGQATDSHSLAERAR 60
           +AE E+S    S  GN  A S    E  K        DYIHVRARRGQATD HSLAERAR
Sbjct: 144 EAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERAR 203

Query: 61  REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 118
           REKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQVEFLSMKL  +N  + L
Sbjct: 204 REKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELEL 261


>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
           SV=1
          Length = 304

 Score =  139 bits (351), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 76/131 (58%), Positives = 93/131 (70%), Gaps = 10/131 (7%)

Query: 7   KNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISE 66
           K E+ ++  ++  S   N   E+S   + P DYIHVRARRG+ATD HSLAERARREKIS+
Sbjct: 109 KAEDETEPSMKGKSNMSN--TETSSEIQKP-DYIHVRARRGEATDRHSLAERARREKISK 165

Query: 67  RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFH 126
           +MK LQD+VPGCNKV GKA +LDEIINY+QSLQ+QVEFLSMKL  +N      P +E  H
Sbjct: 166 KMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVIN------PELEC-H 218

Query: 127 PKDLGEQAFDA 137
             DL  + F A
Sbjct: 219 IDDLSAKQFQA 229


>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2
           SV=1
          Length = 327

 Score =  134 bits (338), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 60/80 (75%), Positives = 73/80 (91%)

Query: 39  YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 98
           Y+HVRARRGQATD+HSLAERARREKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++Q+L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTL 241

Query: 99  QRQVEFLSMKLEAVNSRMNL 118
           QRQVE LSM+L AVN R++ 
Sbjct: 242 QRQVEMLSMRLAAVNPRIDF 261


>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
           SV=1
          Length = 223

 Score =  126 bits (316), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 57/87 (65%), Positives = 73/87 (83%)

Query: 33  SEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 92
           ++ PKD +HVRA+RGQATDSHSLAER RREKI+ER+K LQDLVPGC K +G A++LD II
Sbjct: 95  TQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVII 154

Query: 93  NYIQSLQRQVEFLSMKLEAVNSRMNLT 119
           +Y++SLQ Q+EFLSMKL A ++  +L 
Sbjct: 155 DYVRSLQNQIEFLSMKLSAASACYDLN 181


>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2
           SV=1
          Length = 260

 Score =  123 bits (309), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/75 (74%), Positives = 65/75 (86%)

Query: 40  IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
           +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202

Query: 100 RQVEFLSMKLEAVNS 114
            QVEFLSMKL A +S
Sbjct: 203 NQVEFLSMKLTAASS 217


>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
           SV=1
          Length = 261

 Score =  123 bits (308), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 56/78 (71%), Positives = 65/78 (83%)

Query: 41  HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 100
           HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY+QSLQ 
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205

Query: 101 QVEFLSMKLEAVNSRMNL 118
           QVEFLSMKL A +S  + 
Sbjct: 206 QVEFLSMKLTAASSYYDF 223


>sp|Q3EAI1|BH060_ARATH Transcription factor bHLH60 OS=Arabidopsis thaliana GN=BHLH60 PE=2
           SV=1
          Length = 426

 Score =  114 bits (285), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 82/150 (54%), Gaps = 48/150 (32%)

Query: 39  YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK------------------ 80
           Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K                  
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFGVHL 260

Query: 81  -----------------------------VIGKALVLDEIINYIQSLQRQVEFLSMKLEA 111
                                        + G ALVLDEIIN++QSLQRQVE LSM+L A
Sbjct: 261 LMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMRLAA 320

Query: 112 VNSRMNLT-PTIEGFHPKDLGEQAFDATGM 140
           VN R++    TI       L + +F+A  M
Sbjct: 321 VNPRIDFNLDTILASENGSLMDGSFNAAPM 350


>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
           SV=1
          Length = 350

 Score = 97.8 bits (242), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/113 (48%), Positives = 73/113 (64%), Gaps = 7/113 (6%)

Query: 35  PPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 94
           PP+    +RARRGQATD HS+AER RRE+I+ERMK LQ+LVP  NK   KA +LDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDY 189

Query: 95  IQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTA 147
           ++ LQ QV+ LSM      SR+    ++     +  G     ++ M+ GSQTA
Sbjct: 190 VKFLQLQVKVLSM------SRLGGAASVSSQISEAGGSHGNASSAMVGGSQTA 236


>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
           SV=2
          Length = 310

 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 8/103 (7%)

Query: 5   GSKNENGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKI 64
           GS  +  ++++  AS+  G   A+   P   PK    VRARRGQATD HS+AER RRE+I
Sbjct: 100 GSGGQTQTQSQATASATTGGATAQ---PQTKPK----VRARRGQATDPHSIAERLRRERI 152

Query: 65  SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
           +ERMK LQ+LVP  NK   KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 153 AERMKSLQELVPNGNKT-DKASMLDEIIDYVKFLQLQVKVLSM 194


>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
           SV=1
          Length = 297

 Score = 89.4 bits (220), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 1/66 (1%)

Query: 42  VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
           VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP  NK   KA +LDEII Y++ LQ Q
Sbjct: 99  VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKT-DKASMLDEIIEYVRFLQLQ 157

Query: 102 VEFLSM 107
           V+ LSM
Sbjct: 158 VKVLSM 163


>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
          Length = 478

 Score = 72.8 bits (177), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 49/64 (76%), Gaps = 1/64 (1%)

Query: 44  ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
            +R +A + H+L+ER RR++I+ERMK LQ+L+P CNK   KA +LDE I Y++SLQ Q++
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQLQIQ 338

Query: 104 FLSM 107
            +SM
Sbjct: 339 MMSM 342


>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
          Length = 524

 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 51/64 (79%), Gaps = 1/64 (1%)

Query: 44  ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
           ++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV  KA +LDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 397

Query: 104 FLSM 107
            +SM
Sbjct: 398 IMSM 401


>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122
           PE=1 SV=1
          Length = 379

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 43/64 (67%)

Query: 42  VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
           +RA+RG AT   S+AER RR KISERM+ LQDLVP  +     A +LD  + YI+ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363

Query: 102 VEFL 105
           V+ L
Sbjct: 364 VKAL 367


>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
           PE=1 SV=1
          Length = 359

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 46/65 (70%)

Query: 42  VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
           +RA+RG AT   S+AER RR +ISERM+ LQ+LVP  +K    + +LD  ++YI+ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338

Query: 102 VEFLS 106
            + L+
Sbjct: 339 YKILN 343


>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
           SV=2
          Length = 310

 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 1/78 (1%)

Query: 30  SKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 89
           S P +P      VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP  NK   +A ++D
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMID 192

Query: 90  EIINYIQSLQRQVEFLSM 107
           EI++Y++ L+ QV+ LSM
Sbjct: 193 EIVDYVKFLRLQVKVLSM 210


>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
           GN=BHLH56 PE=4 SV=2
          Length = 445

 Score = 66.6 bits (161), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 2/72 (2%)

Query: 45  RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE- 103
           +R +  + H+LAER RREKI+E+MK LQ L+P CNK   K   LD+ I Y++SLQ Q++ 
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQG 310

Query: 104 FLSMKLEAVNSR 115
            +S  + A N++
Sbjct: 311 MMSPMMNAGNTQ 322


>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
           SV=1
          Length = 262

 Score = 66.2 bits (160), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 47/67 (70%)

Query: 40  IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 99
             VRA+RG AT   S+AER RR +IS+R++ LQ+LVP  +K    A +L+E + Y++ LQ
Sbjct: 182 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 241

Query: 100 RQVEFLS 106
           RQ++ L+
Sbjct: 242 RQIQELT 248


>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
          Length = 416

 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 6/76 (7%)

Query: 37  KDYIHVRAR-----RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 91
           K  +H R R     R ++T+ H L ER RR++ +++M+ LQDL+P C K   KA +LDE 
Sbjct: 213 KTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEA 271

Query: 92  INYIQSLQRQVEFLSM 107
           I Y+++LQ QV+ +SM
Sbjct: 272 IKYMRTLQLQVQMMSM 287


>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
           SV=1
          Length = 352

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 4/81 (4%)

Query: 29  SSKPSEPPKDYI---HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 85
           SSK  +P K        RA RG ATD  SL  R RRE+I+ER++ILQ+LVP   KV   +
Sbjct: 250 SSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DIS 308

Query: 86  LVLDEIINYIQSLQRQVEFLS 106
            +L+E ++Y++ LQ Q++ LS
Sbjct: 309 TMLEEAVHYVKFLQLQIKLLS 329


>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
           PE=2 SV=1
          Length = 307

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 44/58 (75%), Gaps = 1/58 (1%)

Query: 45  RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
           +R +A + H+LAER RREKI+ERMK LQ L+P CNK   K  +L+++I Y++SL+ Q+
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQI 203


>sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2
           SV=1
          Length = 302

 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%)

Query: 42  VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
           VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP  NK   +A ++DEI++Y++ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 202

Query: 102 VEFLSM 107
           V+ LSM
Sbjct: 203 VKVLSM 208


>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
           SV=1
          Length = 413

 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)

Query: 44  ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
           ++R +A   H L+ER RR+KI+E MK LQ+L+P C K   ++ +LD++I Y++SLQ Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQIQ 331

Query: 104 FLSM 107
             SM
Sbjct: 332 MFSM 335


>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
           SV=1
          Length = 259

 Score = 63.5 bits (153), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 47/65 (72%)

Query: 42  VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
           VRA+RG AT   S+AER RR +IS+R++ LQ+LVP  +K    A +L+E + Y+++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240

Query: 102 VEFLS 106
           ++ L+
Sbjct: 241 IQELT 245


>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
           SV=1
          Length = 328

 Score = 62.8 bits (151), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)

Query: 42  VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
            RA RG ATD  SL  R RRE+I+ER++ILQ LVP   KV   + +L+E + Y++ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQ 295

Query: 102 VEFLS 106
           ++ LS
Sbjct: 296 IKLLS 300


>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
           SV=1
          Length = 258

 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 42  VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
            RA +G ATD  SL  R RREKI+ER+K LQ+LVP   KV   + +L+E ++Y++ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 225

Query: 102 VEFLS 106
           ++ LS
Sbjct: 226 IKLLS 230


>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
           SV=1
          Length = 399

 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 9/77 (11%)

Query: 42  VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 101
           V  +R +A   H+ +ER RR+KI++RMK LQ LVP  +K   KA +LDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 265

Query: 102 VEFLSMKLEAVNSRMNL 118
           V  +        SRMN+
Sbjct: 266 VSMM--------SRMNM 274


>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
          Length = 430

 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 12/96 (12%)

Query: 10  NGSKAEVEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMK 69
           N +   V  S A GNK  + S  +           RR +A + H+L+ER RR++I+ERMK
Sbjct: 230 NHTDESVSLSDAIGNKSNQRSGSN-----------RRSRAAEVHNLSERRRRDRINERMK 278

Query: 70  ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 105
            LQ+L+P C+K   KA +LDE I+Y++SLQ Q++ +
Sbjct: 279 ALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQVM 313


>sp|Q9ZW81|BH129_ARATH Transcription factor bHLH129 OS=Arabidopsis thaliana GN=BHLH129
           PE=2 SV=2
          Length = 297

 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)

Query: 36  PKDYIHVRAR--RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
           P+D +  RAR  RG AT   S+AER RR +IS ++K LQ+LVP  +K    A +LD  + 
Sbjct: 225 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 284

Query: 94  YIQSLQRQVE 103
           +I+ LQ QVE
Sbjct: 285 HIKGLQHQVE 294


>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
           SV=1
          Length = 373

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 9/88 (10%)

Query: 48  QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
           +A + H+L+E+ RR +I+E+MK LQ L+P  NK   KA +LDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTM 255

Query: 108 KLEAVNSRMNLTP-TIEG--FHPKDLGE 132
           +     + +NL P  + G   HP  L +
Sbjct: 256 R-----NGINLHPLCLPGTTLHPLQLSQ 278


>sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1
          Length = 444

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 49/64 (76%), Gaps = 1/64 (1%)

Query: 44  ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 103
            RR +A + H+L+ER RR++I+ERMK LQ+L+P C++   KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQ 310

Query: 104 FLSM 107
            + M
Sbjct: 311 VMWM 314


>sp|Q8H102|BH128_ARATH Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128
           PE=1 SV=1
          Length = 362

 Score = 59.7 bits (143), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 2/72 (2%)

Query: 36  PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 93
           P+D +   +RA+RG AT   S+AER RR +IS ++K LQDLVP  +K    + +LD  + 
Sbjct: 275 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 334

Query: 94  YIQSLQRQVEFL 105
           +I+ LQ Q++ L
Sbjct: 335 HIKGLQHQLQNL 346


>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
           SV=1
          Length = 373

 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 5/89 (5%)

Query: 49  ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV---EFL 105
           +TD  ++A R RRE+ISE++++LQ LVPG  K +  A +LDE  NY++ L+ QV   E L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTK-MDTASMLDEAANYLKFLRAQVKALENL 334

Query: 106 SMKLEAVNSRMNLTPT-IEGFHPKDLGEQ 133
             KL+  N   +  PT    FHP  L  Q
Sbjct: 335 RPKLDQTNLSFSSAPTSFPLFHPSFLPLQ 363


>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
           SV=1
          Length = 298

 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 7/102 (6%)

Query: 11  GSKAEVEASSAAGNK---PAESSKPSEPPKDYIHVRARRGQAT---DSHSLAERARREKI 64
           GS+ E  +  +AGNK     ES++PS+     +  + +    T   D  SLA + RRE+I
Sbjct: 158 GSRNESLSPKSAGNKRSHTGESTQPSKKLSSGVTGKTKPKPTTSPKDPQSLAAKNRRERI 217

Query: 65  SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
           SER+KILQ+LVP   KV     +L++ I+Y++ LQ QV+ L+
Sbjct: 218 SERLKILQELVPNGTKV-DLVTMLEKAISYVKFLQVQVKVLA 258


>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
           SV=1
          Length = 637

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 50  TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKL 109
           T +H++ E+ RREK++ER   L+ ++P  NK I K  +LD+ I Y+Q L+R+V+ L    
Sbjct: 439 TGNHAVLEKKRREKLNERFMTLRKIIPSINK-IDKVSILDDTIEYLQELERRVQELESCR 497

Query: 110 EAVNSRMNLTPTIEGFHPKDLGEQA 134
           E+ ++    T T++   P D GE+ 
Sbjct: 498 ESTDTETRGTMTMKRKKPCDAGERT 522


>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
          Length = 210

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 53  HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
           H+L+E+ RR KI+E+MK LQ L+P  NK   KA +LDE I Y++ LQ QV+ L++
Sbjct: 98  HNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 151


>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
           PE=4 SV=1
          Length = 223

 Score = 56.2 bits (134), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%)

Query: 43  RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
           +A RG A+D  SL  R RRE+I++R+K LQ LVP   KV   + +L++ ++Y++ LQ Q+
Sbjct: 133 KANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKV-DISTMLEDAVHYVKFLQLQI 191

Query: 103 EFLS 106
           + LS
Sbjct: 192 KLLS 195


>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
           GN=BHLH86 PE=4 SV=2
          Length = 307

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 7/102 (6%)

Query: 11  GSKAEVEASSAAGNK---PAESSKPSEPPKDYIHVRARRGQAT---DSHSLAERARREKI 64
           GS+ E  +   AGNK     E+++ S+ P    + + +    T   D  SLA + RRE+I
Sbjct: 164 GSRHESTSPKLAGNKRPFTGENTQLSKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERI 223

Query: 65  SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 106
           SER+K+LQ+LVP   KV     +L++ I Y++ LQ QV+ L+
Sbjct: 224 SERLKVLQELVPNGTKV-DLVTMLEKAIGYVKFLQVQVKVLA 264


>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
           SV=1
          Length = 596

 Score = 53.5 bits (127), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 1/72 (1%)

Query: 48  QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 107
           + T +H+L+E+ RREK++ER   L+ ++P  +K I K  +LD+ I Y+Q LQ++V+ L  
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISK-IDKVSILDDTIEYLQDLQKRVQELES 459

Query: 108 KLEAVNSRMNLT 119
             E+ ++   +T
Sbjct: 460 CRESADTETRIT 471


>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
           PE=4 SV=1
          Length = 912

 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 6/94 (6%)

Query: 43  RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 102
           R+    +TD  S+A R RR +IS+R KILQ +VPG  K +    +LDE I+Y++ L+ Q+
Sbjct: 38  RSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAK-MDTVSMLDEAISYVKFLKAQI 96

Query: 103 EFLSMKLEAVN-----SRMNLTPTIEGFHPKDLG 131
            +    L  +N     S    +P    F PK  G
Sbjct: 97  WYHQNMLLFINDHETTSSCTYSPGAGEFGPKLFG 130


>sp|Q570R7|PIF7_ARATH Transcription factor PIF7 OS=Arabidopsis thaliana GN=BHLH72 PE=1
           SV=2
          Length = 366

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 47/64 (73%), Gaps = 1/64 (1%)

Query: 45  RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 104
           RRG+A   H+ +ER RR++I++RM+ LQ L+P  +K   K  +LD++I +++ LQ QV+F
Sbjct: 163 RRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKA-DKVSILDDVIEHLKQLQAQVQF 221

Query: 105 LSMK 108
           +S++
Sbjct: 222 MSLR 225


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.311    0.127    0.350 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,434,846
Number of Sequences: 539616
Number of extensions: 2266609
Number of successful extensions: 7198
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 6989
Number of HSP's gapped (non-prelim): 285
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)