Query 030783
Match_columns 171
No_of_seqs 15 out of 17
Neff 1.9
Searched_HMMs 29240
Date Mon Mar 25 06:42:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030783.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030783hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wgq_A FYVE, rhogef and PH dom 98.7 9.5E-09 3.3E-13 68.9 3.3 91 60-169 8-98 (109)
2 1pls_A Pleckstrin homology dom 98.6 1.9E-08 6.6E-13 67.5 3.6 91 61-169 6-96 (113)
3 1u5d_A SKAP55, SRC kinase-asso 98.6 1.2E-08 3.9E-13 66.6 1.6 97 61-169 4-100 (108)
4 2i5f_A Pleckstrin; PH domain, 98.6 1E-08 3.5E-13 67.7 0.9 96 58-169 5-104 (109)
5 1x05_A Pleckstrin; PH domain, 98.5 7.7E-08 2.6E-12 65.9 2.8 95 59-169 17-115 (129)
6 1v89_A Hypothetical protein KI 98.4 1.2E-07 4E-12 62.9 3.1 93 60-169 8-107 (118)
7 1u5f_A SRC-associated adaptor 98.4 8.6E-08 2.9E-12 67.9 2.2 100 58-169 15-114 (148)
8 2d9y_A Pleckstrin homology dom 98.4 2.2E-07 7.7E-12 61.9 3.8 91 61-169 12-104 (117)
9 2yry_A Pleckstrin homology dom 98.4 2.8E-07 9.6E-12 62.1 3.7 93 61-169 23-115 (122)
10 1eaz_A Tandem PH domain contai 98.3 7.5E-08 2.6E-12 64.9 0.6 94 59-169 13-106 (125)
11 2dn6_A KIAA0640 protein; PH do 98.3 1.8E-07 6.3E-12 62.2 1.5 90 61-169 9-98 (115)
12 2cod_A Centaurin-delta 1; ARF 98.3 2E-07 6.9E-12 62.9 1.7 86 61-169 9-94 (115)
13 1upq_A PEPP1; PH domain, phosp 98.3 3.8E-07 1.3E-11 61.5 3.0 93 61-169 12-104 (123)
14 3rcp_A Pleckstrin homology dom 98.3 6.4E-07 2.2E-11 59.2 3.5 86 62-169 1-88 (103)
15 1fao_A Dual adaptor of phospho 98.2 4.4E-07 1.5E-11 61.9 2.5 91 59-169 17-107 (126)
16 3aj4_A Pleckstrin homology dom 98.2 4.1E-07 1.4E-11 60.9 2.2 92 61-169 6-106 (112)
17 1fgy_A GRP1; PH domain, signal 98.2 3.3E-07 1.1E-11 61.7 1.3 91 59-169 4-115 (127)
18 1x1g_A Pleckstrin 2; PH domain 98.2 9.6E-07 3.3E-11 60.2 3.1 96 59-169 17-119 (129)
19 1v5u_A SBF1, SET binding facto 98.2 9.7E-07 3.3E-11 58.8 2.9 95 60-169 8-106 (117)
20 2dkp_A Pleckstrin homology dom 98.1 6.7E-07 2.3E-11 60.7 1.6 93 61-169 22-114 (128)
21 2y7b_A Actin-binding protein a 98.1 9E-07 3.1E-11 60.7 1.3 94 61-169 6-123 (134)
22 1btn_A Beta-spectrin; signal t 98.0 2.7E-06 9.3E-11 55.7 3.1 96 62-169 1-103 (106)
23 2w2x_D 1-phosphatidylinositol- 98.0 2.3E-06 7.7E-11 60.3 2.6 95 57-169 9-114 (124)
24 2d9v_A Pleckstrin homology dom 98.0 1.6E-06 5.4E-11 61.0 1.5 94 62-169 10-109 (130)
25 1v5p_A Pleckstrin homology dom 98.0 1.9E-06 6.4E-11 62.2 1.8 97 57-169 12-115 (126)
26 4h8s_A DCC-interacting protein 98.0 2.3E-06 8E-11 70.5 2.4 126 25-169 252-393 (407)
27 2d9x_A Oxysterol binding prote 98.0 2.2E-06 7.7E-11 58.7 1.6 88 60-169 8-99 (120)
28 3tca_A Amyloid beta A4 precurs 97.9 2E-06 6.8E-11 65.9 1.2 94 61-169 169-271 (291)
29 1u5e_A SRC-associated adaptor 97.9 3.2E-06 1.1E-10 65.6 2.4 98 60-169 106-203 (211)
30 2dhk_A TBC1 domain family memb 97.9 4.4E-06 1.5E-10 57.5 2.7 90 60-169 8-99 (119)
31 1v88_A Oxysterol binding prote 97.9 5.4E-06 1.8E-10 60.2 2.9 87 62-169 10-119 (130)
32 2cof_A Protein KIAA1914; PH do 97.9 5.2E-06 1.8E-10 55.8 2.5 86 60-169 8-96 (107)
33 3cxb_B Pleckstrin homology dom 97.9 5.9E-06 2E-10 57.3 2.8 93 63-169 3-96 (112)
34 1unq_A RAC-alpha serine/threon 97.9 2.3E-06 7.8E-11 58.4 0.4 93 61-169 9-105 (125)
35 2rsg_A Collagen type IV alpha- 97.7 2E-05 6.7E-10 51.5 3.1 84 63-169 4-89 (94)
36 1wi1_A Calcium-dependent activ 97.7 1.3E-05 4.3E-10 60.8 2.2 92 61-170 9-106 (126)
37 2lul_A Tyrosine-protein kinase 97.7 3.5E-05 1.2E-09 57.0 4.5 99 61-169 16-116 (164)
38 2coc_A FYVE, rhogef and PH dom 97.7 2E-05 6.9E-10 56.5 3.1 90 60-169 8-101 (112)
39 1x1f_A Signal-transducing adap 97.7 2.2E-05 7.6E-10 58.8 3.5 88 62-169 20-108 (149)
40 2j59_M RHO-GTPase activating p 97.7 1.8E-05 6.3E-10 56.9 2.9 99 60-169 3-106 (168)
41 1wg7_A Dedicator of cytokinesi 97.7 9.6E-06 3.3E-10 57.1 1.0 95 61-169 19-119 (150)
42 2dtc_A RAL guanine nucleotide 97.7 2.7E-05 9.4E-10 58.3 3.5 94 62-169 3-107 (126)
43 2da0_A 130-kDa phosphatidylino 97.6 1.2E-05 4.2E-10 54.7 1.2 85 61-169 11-96 (114)
44 1btk_A Bruton'S tyrosine kinas 97.6 1.4E-05 4.9E-10 59.9 1.5 98 62-169 5-127 (169)
45 2p0d_A RHO GTPase-activating p 97.5 2.1E-05 7E-10 55.9 0.9 95 61-169 13-119 (129)
46 1dro_A Beta-spectrin; cytoskel 97.5 2.1E-05 7.2E-10 54.3 0.8 98 61-169 9-114 (122)
47 2rlo_A Centaurin-gamma 1; spli 97.5 4.9E-05 1.7E-09 52.9 2.4 95 62-169 6-119 (128)
48 2r09_A Cytohesin-3; autoinhibi 97.4 3.8E-05 1.3E-09 63.4 1.9 89 61-169 214-323 (347)
49 2q13_A DCC-interacting protein 97.4 0.00016 5.4E-09 59.2 4.7 91 61-169 279-370 (385)
50 3a8p_A T-lymphoma invasion and 97.4 4E-05 1.4E-09 61.7 1.1 101 60-169 11-119 (263)
51 1wjm_A Beta-spectrin III; PH d 97.4 3.5E-05 1.2E-09 52.7 0.5 97 61-169 9-112 (123)
52 3pp2_A RHO GTPase-activating p 97.2 0.0001 3.5E-09 51.9 1.8 98 61-169 9-118 (124)
53 1qqg_A IRS-1, insulin receptor 97.2 5.8E-05 2E-09 60.9 -0.0 86 60-169 10-107 (264)
54 3lju_X ARF-GAP with dual PH do 97.1 0.00017 5.7E-09 60.8 2.4 93 62-169 271-367 (386)
55 3tfm_A Myosin X; split PH doma 97.1 9.7E-05 3.3E-09 57.2 0.9 74 88-169 77-150 (228)
56 4a6h_A Phosphatidylinositol 4, 97.0 0.00043 1.5E-08 49.9 2.9 48 61-122 7-57 (120)
57 2rov_A RHO-associated protein 97.0 0.00011 3.6E-09 52.9 -0.3 81 89-169 19-110 (117)
58 3lju_X ARF-GAP with dual PH do 96.7 0.00018 6.2E-09 60.6 -1.0 111 40-169 119-241 (386)
59 4gmv_A RAS-associated and plec 95.8 0.0028 9.6E-08 52.8 1.5 94 61-169 159-261 (281)
60 3hk0_A Growth factor receptor- 95.1 0.013 4.3E-07 48.2 3.2 95 60-169 132-235 (256)
61 3a8n_A TIAM-1, T-lymphoma inva 94.7 0.0057 2E-07 50.9 0.2 102 60-169 11-119 (279)
62 1dyn_A Dynamin; signal transdu 94.6 0.0084 2.9E-07 45.9 0.9 77 87-169 26-112 (125)
63 4ejn_A RAC-alpha serine/threon 87.8 0.17 5.7E-06 40.8 1.3 73 63-151 9-82 (446)
64 2ys3_A UNC-112-related protein 84.7 0.41 1.4E-05 37.0 2.0 76 87-169 25-107 (137)
65 2yy0_A C-MYC-binding protein; 80.5 1.1 3.8E-05 29.5 2.5 32 20-51 19-50 (53)
66 1go4_E MAD1 (mitotic arrest de 77.7 1.2 4E-05 33.1 2.2 34 19-52 11-44 (100)
67 2yy0_A C-MYC-binding protein; 76.3 1.4 4.8E-05 29.0 2.0 30 25-54 17-46 (53)
68 2coa_A Protein kinase C, D2 ty 72.3 4.8 0.00016 30.8 4.4 60 89-148 23-83 (125)
69 2aze_B Transcription factor E2 68.5 3.2 0.00011 30.2 2.7 42 27-68 6-51 (106)
70 3tfm_A Myosin X; split PH doma 68.2 5.7 0.00019 30.4 4.1 31 62-106 23-53 (228)
71 2fjl_A 1-phosphatidylinositol- 64.9 6.2 0.00021 30.6 3.8 33 63-109 4-36 (150)
72 2fcw_A Alpha-2-macroglobulin r 60.3 8.4 0.00029 29.1 3.6 35 23-57 20-57 (109)
73 4etp_A Kinesin-like protein KA 59.8 6.3 0.00022 33.7 3.3 40 20-59 3-42 (403)
74 1l8d_A DNA double-strand break 57.1 8.8 0.0003 26.4 3.1 44 20-65 64-107 (112)
75 1zme_C Proline utilization tra 55.1 10 0.00035 23.6 2.9 32 20-51 37-68 (70)
76 1dip_A Delta-sleep-inducing pe 53.5 3.3 0.00011 30.1 0.4 31 25-59 13-43 (78)
77 2d9z_A Protein kinase C, NU ty 53.2 16 0.00055 28.1 4.2 60 89-148 23-83 (129)
78 3viq_B Mating-type switching p 53.1 7.7 0.00026 28.1 2.3 26 28-53 2-27 (85)
79 2rjz_A PILO protein; structura 49.6 6.6 0.00022 29.3 1.5 48 25-72 13-67 (147)
80 3kqg_A Langerin, C-type lectin 47.9 9.7 0.00033 27.0 2.1 89 27-119 6-120 (182)
81 1wt6_A Myotonin-protein kinase 44.1 19 0.00065 26.1 3.1 46 19-64 30-75 (81)
82 2j5u_A MREC protein; bacterial 43.2 16 0.00056 29.3 3.0 66 25-100 24-93 (255)
83 1t2k_D Cyclic-AMP-dependent tr 41.4 14 0.00048 23.8 2.0 32 25-56 27-58 (61)
84 1fmh_A General control protein 41.2 14 0.00047 23.0 1.8 25 28-52 2-29 (33)
85 3i00_A HIP-I, huntingtin-inter 41.1 16 0.00054 27.3 2.4 33 21-53 16-59 (120)
86 2it9_A Hypothetical protein; s 40.7 9.4 0.00032 29.4 1.2 63 21-97 31-93 (127)
87 1l8d_A DNA double-strand break 39.8 26 0.00088 24.0 3.2 38 23-60 6-43 (112)
88 2lw1_A ABC transporter ATP-bin 39.3 27 0.00092 23.8 3.2 31 21-51 13-46 (89)
89 1g6u_A Domain swapped dimer; d 38.4 26 0.0009 23.2 2.9 30 23-52 16-45 (48)
90 1ci6_A Transcription factor AT 38.2 29 0.001 22.8 3.1 37 22-58 25-61 (63)
91 1nkp_B MAX protein, MYC proto- 37.6 17 0.00057 24.4 1.9 23 28-50 55-77 (83)
92 2wt7_A Proto-oncogene protein 37.6 29 0.001 22.6 3.1 38 21-58 24-61 (63)
93 3q8t_A Beclin-1; autophagy, AT 36.6 25 0.00086 24.9 2.8 27 27-53 4-30 (96)
94 3he4_B Synzip5; heterodimeric 36.3 22 0.00077 23.4 2.3 25 29-53 5-29 (46)
95 1deb_A APC protein, adenomatou 34.3 39 0.0013 23.0 3.3 40 21-60 11-50 (54)
96 2dgc_A Protein (GCN4); basic d 33.5 18 0.00061 24.0 1.5 30 21-50 31-60 (63)
97 2p01_A Alpha-2-macroglobulin r 33.1 35 0.0012 29.9 3.6 36 23-58 234-272 (323)
98 3efg_A Protein SLYX homolog; x 32.9 21 0.00071 24.7 1.8 36 29-64 30-65 (78)
99 3gpv_A Transcriptional regulat 32.8 19 0.00064 26.3 1.7 36 23-58 98-133 (148)
100 1x8y_A Lamin A/C; structural p 32.2 24 0.00081 24.4 2.0 16 27-42 3-18 (86)
101 2jee_A YIIU; FTSZ, septum, coi 31.4 41 0.0014 24.1 3.2 17 42-58 56-72 (81)
102 2wuj_A Septum site-determining 31.1 17 0.00058 23.6 1.1 27 23-49 30-56 (57)
103 1q08_A Zn(II)-responsive regul 29.8 46 0.0016 21.8 3.1 32 29-60 41-72 (99)
104 3hnw_A Uncharacterized protein 29.5 27 0.00091 26.3 2.0 25 27-51 89-113 (138)
105 1r8d_A Transcription activator 29.0 23 0.0008 24.1 1.6 26 32-57 80-105 (109)
106 1t2k_D Cyclic-AMP-dependent tr 28.7 50 0.0017 21.1 3.0 32 19-50 28-59 (61)
107 4dzo_A Mitotic spindle assembl 28.7 30 0.001 25.7 2.2 42 26-67 3-46 (123)
108 3gp4_A Transcriptional regulat 28.4 35 0.0012 24.9 2.5 36 22-57 83-118 (142)
109 2p4v_A Transcription elongatio 27.3 55 0.0019 24.5 3.5 24 39-62 51-74 (158)
110 2nvn_A Hypothetical protein; s 27.1 10 0.00035 29.1 -0.6 67 21-101 33-99 (122)
111 3vxj_A DYP; DYE-decolorizing p 26.6 10 0.00036 32.9 -0.7 16 89-104 414-429 (442)
112 3htk_A Structural maintenance 26.2 48 0.0016 20.6 2.5 34 21-54 13-46 (60)
113 3pbf_A Pulmonary surfactant-as 26.0 24 0.00083 23.9 1.2 90 29-121 4-102 (148)
114 3zwh_Q Myosin-9; Ca-binding pr 25.9 21 0.00071 23.2 0.8 32 32-63 4-35 (45)
115 2aze_B Transcription factor E2 25.4 49 0.0017 23.9 2.8 37 19-55 5-41 (106)
116 3cve_A Homer protein homolog 1 25.2 57 0.0019 22.8 3.0 32 27-58 21-52 (72)
117 2f1m_A Acriflavine resistance 24.8 70 0.0024 24.1 3.6 46 24-69 95-144 (277)
118 2ve7_A Kinetochore protein HEC 24.7 51 0.0017 27.2 3.1 23 19-41 184-206 (315)
119 1jcd_A Major outer membrane li 24.6 38 0.0013 22.3 1.9 32 21-52 19-50 (52)
120 4dyl_A Tyrosine-protein kinase 24.6 91 0.0031 25.9 4.6 20 40-59 372-391 (406)
121 3cvf_A Homer-3, homer protein 24.3 60 0.002 23.0 3.0 31 28-58 28-58 (79)
122 2er8_A Regulatory protein Leu3 23.8 29 0.00099 21.7 1.2 20 33-52 48-67 (72)
123 4ani_A Protein GRPE; chaperone 23.2 45 0.0015 27.0 2.4 35 20-54 59-93 (213)
124 2zdi_C Prefoldin subunit alpha 23.1 66 0.0023 23.4 3.1 42 19-60 97-138 (151)
125 3u06_A Protein claret segregat 23.0 63 0.0022 27.8 3.4 33 26-58 9-41 (412)
126 1grj_A GREA protein; transcrip 23.0 58 0.002 24.3 2.8 23 40-62 52-74 (158)
127 1wle_A Seryl-tRNA synthetase; 22.8 43 0.0015 29.8 2.4 31 21-51 117-147 (501)
128 3bmb_A Regulator of nucleoside 21.4 42 0.0014 24.3 1.8 40 20-62 4-43 (136)
129 1go4_E MAD1 (mitotic arrest de 21.1 88 0.003 23.0 3.4 42 24-65 9-50 (100)
130 3ub6_A Chemoreceptor TLPB; hom 20.8 1.3E+02 0.0043 22.3 4.3 46 23-70 8-76 (181)
131 1r8d_A Transcription activator 20.4 72 0.0025 21.6 2.7 21 27-47 82-102 (109)
132 2khk_A ATP synthase subunit B; 20.2 81 0.0028 18.9 2.6 30 32-61 11-40 (53)
133 1r8e_A Multidrug-efflux transp 20.1 82 0.0028 23.7 3.2 35 23-57 82-116 (278)
No 1
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.68 E-value=9.5e-09 Score=68.86 Aligned_cols=91 Identities=15% Similarity=0.208 Sum_probs=71.2
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceE
Q 030783 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQ 139 (171)
Q Consensus 60 arlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~ 139 (171)
..++|||+-+.. -..-|=.||+||.|.+++||-...|-.|.+++-|.++.-+-..+. ....
T Consensus 8 ~~~~G~L~K~~~--------------~~~~Wk~RwfvL~~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~~-----~~~~ 68 (109)
T 1wgq_A 8 STMSGYLYRSKG--------------SKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDE-----NSES 68 (109)
T ss_dssp CSCEEEEEEESS--------------TTSCCEEEEEEEETTEEEEESCTTCSSCSEEEECSSEEEEECCCS-----SCSS
T ss_pred CeEEEEEEeCCC--------------CCCCceeEEEEEeCCEEEEECCCCcCccCceEECCCCEEEECCCC-----CCCC
Confidence 357999997631 146799999999999999999999999999999988776544332 2235
Q ss_pred EEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 140 YCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 140 yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
++|-|.|.++-.|..+..++-+.+.|+.+|
T Consensus 69 ~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al 98 (109)
T 1wgq_A 69 KVFQLLHKGMVFYVFKADDAHSTQRWIDAF 98 (109)
T ss_dssp SEEEEEETTEEEEEEECSSHHHHHHHHHHH
T ss_pred cEEEEEeCCCeEEEEECCCHHHHHHHHHHH
Confidence 899999887766777777788888898765
No 2
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.63 E-value=1.9e-08 Score=67.51 Aligned_cols=91 Identities=20% Similarity=0.221 Sum_probs=72.9
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceEE
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~y 140 (171)
-.+|||+-+.. -..-|=.||+||.|.+++||--..|-.|.+.+-|.++..+-.. .+++...+
T Consensus 6 ~~~G~L~K~g~--------------~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~----~~~~~~~~ 67 (113)
T 1pls_A 6 IREGYLVKKGS--------------VFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPC----QDFGKRMF 67 (113)
T ss_dssp SEEEEEEEESS--------------SSSCCEEEEEEEETTEEEEESSTTCSSCSEEEESSSCCEESSC----CSSCCSSS
T ss_pred cEEEEEEEeCC--------------CCCCceEEEEEEECCEEEEEeCCCCCCcceEEEcCCCEEEEec----CCCCCCcc
Confidence 36899998753 2457999999999999999998889999999999988766422 23445578
Q ss_pred EEEEEeecceeeeecccceeeeeeeeeee
Q 030783 141 CFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
+|-|.|..|=.|..+..++-+.+.|+.+|
T Consensus 68 ~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai 96 (113)
T 1pls_A 68 VFKITTTKQQDHFFQAAFLEERDAWVRDI 96 (113)
T ss_dssp EEEEEETTTEEEEEECSSHHHHHHHHHHH
T ss_pred EEEEEcCCCCEEEEECCCHHHHHHHHHHH
Confidence 99999988777777777888888898765
No 3
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=98.59 E-value=1.2e-08 Score=66.64 Aligned_cols=97 Identities=15% Similarity=0.314 Sum_probs=73.6
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceEE
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~y 140 (171)
-.+|||+-+.+-..+. ...|=.||+||.|.+++||--..|-.|.+++-|.++. |-..|.. .++....+
T Consensus 4 ~~~G~L~K~~~~~~~~----------~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~-v~~~~~~-~~~~~~~~ 71 (108)
T 1u5d_A 4 IKQGYLEKKSKDHSFF----------GSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYS-VRMAPHL-RRDSKKES 71 (108)
T ss_dssp EEEEEEEEEEECSSSS----------CEEEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCE-EEECGGG-CSSGGGGG
T ss_pred cEEEEEEEcCCCCCcc----------ccCceeeEEEEeCCEEEEecCCCCCCCCEEEEecceE-EEeCCcc-ccccCCcc
Confidence 3589999987532211 2579999999999999999999999999999998877 3333322 24445579
Q ss_pred EEEEEeecceeeeecccceeeeeeeeeee
Q 030783 141 CFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
+|-|.|..|=.|..+..+.-+.+.|+.+|
T Consensus 72 ~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai 100 (108)
T 1u5d_A 72 CFELTSQDRRTYEFTATSPAEARDWVDQI 100 (108)
T ss_dssp EEEEECSSSCCEEEECSSHHHHHHHHHHH
T ss_pred eEEEEcCCCcEEEEECCCHHHHHHHHHHH
Confidence 99999987766777777777888888765
No 4
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=98.57 E-value=1e-08 Score=67.74 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=69.7
Q ss_pred hhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecc--eeEeEeeeCCCCCCCcceeeh--hhhccCCCCccc
Q 030783 58 RSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGS--CIFFYLLSTDLSPQDSTVLSD--VVEVASLPSITR 133 (171)
Q Consensus 58 RsarlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~--cif~yL~sTDLsPqdStllsd--IVEvg~lP~~~r 133 (171)
+..-.+|||+-+... ...|=.||+||.|. +++||-...|-.|.+++-|.+ |+++...|.-..
T Consensus 5 ~~~~~~G~L~K~g~~--------------~~~Wk~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~ 70 (109)
T 2i5f_A 5 GVIIKQGCLLKQGHR--------------RKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRK 70 (109)
T ss_dssp CCEEEEEEEEEECTT--------------TCCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC------
T ss_pred CceeEEEEEEEcCCC--------------CCCceEEEEEEeCCCcEEEEECCCCCCCccEEEECCCCEEEEccCCccccc
Confidence 344578999987431 45699999999986 999998888889999999988 556665553211
Q ss_pred cCCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 134 ENGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 134 Edge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
....++|.|.|..+-.|..+..++-+.+.|+.+|
T Consensus 71 --~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai 104 (109)
T 2i5f_A 71 --SEEENLFEIITADEVHYFLQAATPKERTEWIKAI 104 (109)
T ss_dssp ----CCSEEEEECTTCCEEEEECSSHHHHHHHHHHH
T ss_pred --CCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHH
Confidence 1246899999987655777777777888888775
No 5
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=98.45 E-value=7.7e-08 Score=65.89 Aligned_cols=95 Identities=15% Similarity=0.156 Sum_probs=71.3
Q ss_pred hhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecc--eeEeEeeeCCCCCCCcceeehh--hhccCCCCcccc
Q 030783 59 SARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGS--CIFFYLLSTDLSPQDSTVLSDV--VEVASLPSITRE 134 (171)
Q Consensus 59 sarlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~--cif~yL~sTDLsPqdStllsdI--VEvg~lP~~~rE 134 (171)
..-.+|||+-+... ...|=.||+||.|. |++||-...|-.|.+.+-|.++ +++...|.-..
T Consensus 17 ~~~~~G~L~K~g~~--------------~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~- 81 (129)
T 1x05_A 17 VIIKQGCLLKQGHR--------------RKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRK- 81 (129)
T ss_dssp EEEEEEEEEECCSS--------------CCCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTTCEEEECCCCCCSSS-
T ss_pred CceEEEEEEecCCC--------------CCCCeeEEEEEeCCCCEEEEECCCCCCcceeEEEccCCEEEEccCCccccc-
Confidence 44579999987431 45699999999985 9999988888999999999874 34544443211
Q ss_pred CCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 135 NGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 135 dge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
....++|.|.|..+-.|..+..++-+.+.|+.+|
T Consensus 82 -~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al 115 (129)
T 1x05_A 82 -SEEENLFEIITADEVHYFLQAATPKERTEWIKAI 115 (129)
T ss_dssp -CSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHH
T ss_pred -cCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHH
Confidence 2357899999987655777777788888898775
No 6
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.43 E-value=1.2e-07 Score=62.94 Aligned_cols=93 Identities=17% Similarity=0.260 Sum_probs=67.7
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceE
Q 030783 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQ 139 (171)
Q Consensus 60 arlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~ 139 (171)
.-.+|||+.+.. -...|=.||+||.|.+++||--..|-.|.+.+-|.++.-+...|. ......
T Consensus 8 ~~~~G~L~K~g~--------------~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~---~~~~~~ 70 (118)
T 1v89_A 8 PIKMGWLKKQRS--------------IVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATN---PEEAGK 70 (118)
T ss_dssp EEEEEEEEEECS--------------SSSCEEEEEEEEETTEEEEESSSSCCSCSEEECSTTEEEEEECCC---SSCCCC
T ss_pred CcEEEEEEecCC--------------CCCCccEEEEEEECCEEEEEeCCCCCCceEEEECCCCEEEEcCcC---cccCCc
Confidence 346899999842 245799999999999999999999999999999887542221111 122347
Q ss_pred EEEEEEee-------cceeeeecccceeeeeeeeeee
Q 030783 140 YCFYILTR-------HGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 140 yaFyIlTr-------hGLR~ECSS~skiQVdswLs~l 169 (171)
|+|-|.|. .+=.|..+..++-+.+.|+.+|
T Consensus 71 ~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al 107 (118)
T 1v89_A 71 FVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFL 107 (118)
T ss_dssp CEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHH
T ss_pred ceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHH
Confidence 89999984 4555666666777778888765
No 7
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=98.41 E-value=8.6e-08 Score=67.94 Aligned_cols=100 Identities=17% Similarity=0.230 Sum_probs=73.8
Q ss_pred hhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCc
Q 030783 58 RSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGE 137 (171)
Q Consensus 58 RsarlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge 137 (171)
+..-.+|||+-+..-... -+.-|-.||+||+|.+++||--..|-.|.+.+-|..+. |-..|+. ..++.
T Consensus 15 ~~~~~~G~L~K~g~~~~~----------~~k~WkkR~fvL~~~~L~yyk~~~~~~~~g~i~L~~~~-v~~~~~~-~~~~~ 82 (148)
T 1u5f_A 15 PFVIKAGYLEKRRKDHSF----------LGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYD-VRMNNTL-RKDGK 82 (148)
T ss_dssp SSEEEEEEEEEECCCSSC----------SSCSEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCE-EEECTTS-CSSTT
T ss_pred CCccEEEEEEEeCCCCCC----------cCCCceeEEEEEECCEEEEEcCCCCcccceEEEcCCcE-EEECCCc-ccCCC
Confidence 445679999998643211 13569999999999999999888888999999998774 4444433 23444
Q ss_pred eEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 138 MQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 138 ~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
..++|.|.|..|=.|..+..++-+.+.|+.+|
T Consensus 83 ~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al 114 (148)
T 1u5f_A 83 KDCCFEICAPDKRIYQFTAASPKDAEEWVQQL 114 (148)
T ss_dssp GGGEEEEECTTSCEEEEECSSHHHHHHHHHHH
T ss_pred CccEEEEECCCCcEEEEECCCHHHHHHHHHHH
Confidence 46999999977666666666777778887765
No 8
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.39 E-value=2.2e-07 Score=61.93 Aligned_cols=91 Identities=20% Similarity=0.229 Sum_probs=68.4
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhh--hccCCCCccccCCce
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVV--EVASLPSITRENGEM 138 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIV--Evg~lP~~~rEdge~ 138 (171)
-.+|||+-+.. .-..-|=.||+||.|.+++||-...|-.|.+++-|.++. ++..- +....
T Consensus 12 ~~~G~L~K~~~-------------~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~-----~~~~~ 73 (117)
T 2d9y_A 12 TKAGWLFKQAS-------------SGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPS-----DNISR 73 (117)
T ss_dssp CEEEEEEEECT-------------TSSSCEEEEEEEEETTEEEEESSTTCCSCCEEEECSSCEEEECCTT-----TTCCC
T ss_pred eEEEEEEEeCC-------------CCCCCceEEEEEECCCEEEEECCCCCCCcCCEEEeCCeEEEEcCcc-----ccCCC
Confidence 47899998851 124579999999999999999988899999999998853 33221 22344
Q ss_pred EEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 139 QYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 139 ~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
.++|.|.+..+=.|..+..++-+.+.|+.+|
T Consensus 74 ~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al 104 (117)
T 2d9y_A 74 KHTFKAEHAGVRTYFFSAESPEEQEAWIQAM 104 (117)
T ss_dssp SSEEEEECSSSCEEEEECSSHHHHHHHHHHH
T ss_pred ccEEEEEcCCCcEEEEEcCCHHHHHHHHHHH
Confidence 6899998766666666667777888888765
No 9
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.36 E-value=2.8e-07 Score=62.07 Aligned_cols=93 Identities=20% Similarity=0.250 Sum_probs=68.3
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceEE
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~y 140 (171)
-.+|||+.+.. .-...|-.||+||.|.+++||-...|-.|.+.+-|.++. |..+.. .+.....+
T Consensus 23 ~~~G~L~K~~~-------------~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~-v~~~~~--~~~~~~~~ 86 (122)
T 2yry_A 23 TKAGWLFKQAS-------------SGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFR-VAAVQP--SDNISRKH 86 (122)
T ss_dssp EEEEEEEEECC-------------SSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEESTTCC-CEECCT--TCSCSSSS
T ss_pred cEEEEEEEECC-------------CCCCCcEEEEEEEeCCEEEEECCCCCCCcccEEEcCCCE-EEEcCc--cccCCccc
Confidence 46899998841 013579999999999999999988999999999998864 222210 11223468
Q ss_pred EEEEEeecceeeeecccceeeeeeeeeee
Q 030783 141 CFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
+|-|.+..+=.|..+..++-+.+.|+.+|
T Consensus 87 ~F~i~~~~~r~~~l~a~s~~e~~~Wi~al 115 (122)
T 2yry_A 87 TFKAEHAGVRTYFFSAESPEEQEAWIQAM 115 (122)
T ss_dssp EEEEECSSSCEEEEECSSHHHHHHHHHHH
T ss_pred EEEEecCCCcEEEEEcCCHHHHHHHHHHH
Confidence 99998776666777777777888888765
No 10
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=98.34 E-value=7.5e-08 Score=64.92 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=70.5
Q ss_pred hhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCce
Q 030783 59 SARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEM 138 (171)
Q Consensus 59 sarlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~ 138 (171)
..-.+|||+.+.. -...|-.||+||.|.+++||-...|-.|.+.+-|.++..|...+.- +....
T Consensus 13 ~~~~~G~L~K~g~--------------~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~~~--~~~~~ 76 (125)
T 1eaz_A 13 AVIKAGYCVKQGA--------------VMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQS--DIMMR 76 (125)
T ss_dssp CCSEEEEEEEECT--------------TTCCEEEEEEEECSSEEEEESSTTCSSCSEEEEGGGCCEEEECTTH--HHHTC
T ss_pred CccEEEEEEEeCC--------------CCCCcceEEEEEeCCEEEEEcCCCCCcceeEEEcccceEEeecccc--ccCCc
Confidence 3457899998743 2357999999999999999999999999999999998766543321 12234
Q ss_pred EEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 139 QYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 139 ~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
.++|-|.|.+ =.|.+...++-..+.|+.+|
T Consensus 77 ~~~F~i~~~~-r~~~l~a~s~~e~~~W~~al 106 (125)
T 1eaz_A 77 DNLFEIVTTS-RTFYVQADSPEEMHSWIKAV 106 (125)
T ss_dssp SSEEEEECSS-CEEEEECSSHHHHHHHHHHH
T ss_pred CCEEEEEeCC-cEEEEEcCCHHHHHHHHHHH
Confidence 6899998754 34666666777788888765
No 11
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.29 E-value=1.8e-07 Score=62.18 Aligned_cols=90 Identities=19% Similarity=0.273 Sum_probs=68.3
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceEE
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~y 140 (171)
-.+|||+-|.. -..-|=.||+||.|.+++||-...|-.|.+.+-|.++..|...|.. ....+
T Consensus 9 ~~~G~L~K~~~--------------~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~----~~~~~ 70 (115)
T 2dn6_A 9 LKQGYMMKKGH--------------RRKNWTERWFVLKPNIISYYVSEDLKDKKGDILLDENCCVESLPDK----DGKKC 70 (115)
T ss_dssp SEEEEEEEECT--------------TSSCEEEEEEEECSSCEEEESSTTCSSEEEEECCCTTCEEEEECCC----TTCCS
T ss_pred eEEEEEEecCC--------------CCCCcEEeEEEEECCEEEEeCCCCCcccCcEEEecCcEEEEECCCC----CCCee
Confidence 46899998854 1357999999999999999998889999999999987666655532 22358
Q ss_pred EEEEEeecceeeeecccceeeeeeeeeee
Q 030783 141 CFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
+|.|.|.+. .|.....++-..+.|+.+|
T Consensus 71 ~F~i~~~~r-~~~l~a~s~~e~~~Wi~ai 98 (115)
T 2dn6_A 71 LFLVKCFDK-TFEISASDKKKKQEWIQAI 98 (115)
T ss_dssp EEEEECSSC-EEEEECSSHHHHHHHHHHH
T ss_pred EEEEEeCCC-EEEEEcCCHHHHHHHHHHH
Confidence 999987654 3555556666777887765
No 12
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.28 E-value=2e-07 Score=62.89 Aligned_cols=86 Identities=15% Similarity=0.108 Sum_probs=66.1
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceEE
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~y 140 (171)
-.+|||+-+... -..-|=.||+||.|.+++||--..|-.|.+.+-|.++..|-..+ .+
T Consensus 9 ~~~G~L~K~~~~-------------~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~---------~~ 66 (115)
T 2cod_A 9 VKSGWLDKLSPQ-------------GKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQG---------DN 66 (115)
T ss_dssp CEEEEEEECCSS-------------SSSCCEEEEEEECSSEEEEEESSCCSSCCCEEETTTEEEEEEET---------TT
T ss_pred cEEEEEEEcCCC-------------CCCCCceEEEEEECCEEEEEcCCCCcccCCEEECCcceEEEeCC---------CC
Confidence 468999987431 13469999999999999999999999999999999987665443 47
Q ss_pred EEEEEeecceeeeecccceeeeeeeeeee
Q 030783 141 CFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
+|.|.|. +=.|.....++-+.+.|+.+|
T Consensus 67 ~F~i~~~-~r~~~l~a~s~~e~~~Wi~~l 94 (115)
T 2cod_A 67 KFEVVTT-QRTFVFRVEKEEERNDWISIL 94 (115)
T ss_dssp EEEEEES-SCCEEEECSSHHHHHHHHHHH
T ss_pred EEEEEeC-CcEEEEECCCHHHHHHHHHHH
Confidence 8999854 445556566666777887765
No 13
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=98.28 E-value=3.8e-07 Score=61.50 Aligned_cols=93 Identities=18% Similarity=0.213 Sum_probs=68.3
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceEE
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~y 140 (171)
-.+|||+.+.. . -+.-|-.||+||.|.+++||--..|-.|.+.+-|.++. |-..+.. ......|
T Consensus 12 ~~~G~L~K~~~------~-------~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~-v~~~~~~--~~~~~~~ 75 (123)
T 1upq_A 12 HIRGWLHKQDS------S-------GLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYN-IRPDGPG--APRGRRF 75 (123)
T ss_dssp EEEEEEEEECS------S-------SSCCEEEEEEEEETTEEEEESSTTCCSCCEEEEGGGCE-EEECCSS--CTTSSSS
T ss_pred eEEEEEEeeCC------C-------CCCCceeEEEEEeCCEEEEECCCCCcccceEEECCCCE-EEECCCC--ccCCCcE
Confidence 47899998852 0 12469999999999999999988898999998887642 3333221 2233578
Q ss_pred EEEEEeecceeeeecccceeeeeeeeeee
Q 030783 141 CFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
+|-|.|..+=.|.....++-+.+.|+.+|
T Consensus 76 ~f~i~~~~~r~~~l~a~s~~e~~~Wi~al 104 (123)
T 1upq_A 76 TFTAEHPGMRTYVLAADTLEDLRGWLRAL 104 (123)
T ss_dssp EEEEECTTSCCEEEECSSHHHHHHHHHHH
T ss_pred EEEEECCCCeEEEEECCCHHHHHHHHHHH
Confidence 99998876666666667777888888765
No 14
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=98.25 E-value=6.4e-07 Score=59.16 Aligned_cols=86 Identities=17% Similarity=0.320 Sum_probs=62.4
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCC--CCCCcceeehhhhccCCCCccccCCceE
Q 030783 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDL--SPQDSTVLSDVVEVASLPSITRENGEMQ 139 (171)
Q Consensus 62 lsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDL--sPqdStllsdIVEvg~lP~~~rEdge~~ 139 (171)
+.|||+-++.. ...|=.||+||.|.+++||--..|. .|.+++-|++ ..|...|+ ..
T Consensus 1 ~eG~L~K~g~~--------------~k~Wk~R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L~~-~~v~~~~~-------~~ 58 (103)
T 3rcp_A 1 MEGVLYKWTNY--------------LTGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAV-CEIKVHSA-------DN 58 (103)
T ss_dssp CEEEEEEECCT--------------TTCEEEEEEEEETTEEEEESSCC---CCCSCEEEGGG-CEEECCTT-------CS
T ss_pred CceEEEEccCC--------------CCCeeceEEEEECCEEEEEecCCcccCCcccEEEeee-eEEEEcCC-------CC
Confidence 47999988642 3479999999999999999988875 4999998863 44443332 24
Q ss_pred EEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 140 YCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 140 yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
++|-|.|..+=.|.....++-..+.|+.+|
T Consensus 59 ~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al 88 (103)
T 3rcp_A 59 TRMELIIPGEQHFYMKAVNAAERQRWLVAL 88 (103)
T ss_dssp SEEEEEETTTEEEEEECSSHHHHHHHHHHH
T ss_pred ceEEEEeCCCCEEEEECCCHHHHHHHHHHH
Confidence 588888865556666666777778888765
No 15
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=98.24 E-value=4.4e-07 Score=61.88 Aligned_cols=91 Identities=16% Similarity=0.178 Sum_probs=68.7
Q ss_pred hhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCce
Q 030783 59 SARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEM 138 (171)
Q Consensus 59 sarlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~ 138 (171)
..-.+|||+-+.. -...|=.||+||.|.+++||--..|-.|.+.+-|.++..|..-+ +.+.
T Consensus 17 ~~~~~G~L~K~g~--------------~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~-----~~~~ 77 (126)
T 1fao_A 17 LGTKEGYLTKQGG--------------LVKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDY-----SQER 77 (126)
T ss_dssp TTCEEEEEEEECS--------------SSCCEEEEEEEEETTEEEEESSTTCSSCSEEEEGGGCCEEEEEC-----SSSS
T ss_pred CccEEEEEEEcCC--------------CCCCcccEEEEEECCEEEEeCCCCCCCceeEEEccceEEEEecc-----cCCC
Confidence 4568999998852 23569999999999999999988899999999999886554322 2334
Q ss_pred EEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 139 QYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 139 ~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
.++|.|.|. +=.|.....+.-+.+.|+.+|
T Consensus 78 ~~~F~i~~~-~r~~~l~a~s~~e~~~Wi~al 107 (126)
T 1fao_A 78 VNCFCLVFP-FRTFYLCAKTGVEADEWIKIL 107 (126)
T ss_dssp SSEEEEEET-TEEEEEECSSHHHHHHHHHHH
T ss_pred CCEEEEEeC-CcEEEEECCCHHHHHHHHHHH
Confidence 689999875 345555566666777887665
No 16
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=98.23 E-value=4.1e-07 Score=60.89 Aligned_cols=92 Identities=18% Similarity=0.238 Sum_probs=67.8
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEee-ecceeEeEeeeCCCCCCCcceeehhh-------hccCCCCcc
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVL-HGSCIFFYLLSTDLSPQDSTVLSDVV-------EVASLPSIT 132 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl-~G~cif~yL~sTDLsPqdStllsdIV-------Evg~lP~~~ 132 (171)
-.+|||+-+.. -+.-|=.||+|| .|.+++||--..|-.|.+.+-+.... +|..+ .
T Consensus 6 ~~~G~L~K~g~--------------~~k~WkkR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v---~ 68 (112)
T 3aj4_A 6 VKSGWLLRQST--------------ILKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDT---Q 68 (112)
T ss_dssp SEEEEEEEECS--------------SSCCEEEEEEEECTTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSC---C
T ss_pred eEEEEEEeeCC--------------CCCCeeceEEEEeeCCEEEEEcCCCCCCCCccccccccceeeccccccccc---C
Confidence 35899998743 235799999999 99999999888888888877766543 44331 1
Q ss_pred ccCCce-EEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 133 RENGEM-QYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 133 rEdge~-~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
.+++.. .++|-|.|.++=.|..+..++-..+.|+.+|
T Consensus 69 ~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al 106 (112)
T 3aj4_A 69 PPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTL 106 (112)
T ss_dssp CSTTCCGGGEEEEEETTSCEEEEECSSHHHHHHHHHHH
T ss_pred CCCCCCcCcEEEEEecCCcEEEEEeCCHHHHHHHHHHH
Confidence 223333 6899999877777777777788888888765
No 17
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=98.20 E-value=3.3e-07 Score=61.68 Aligned_cols=91 Identities=16% Similarity=0.342 Sum_probs=65.6
Q ss_pred hhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCce
Q 030783 59 SARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEM 138 (171)
Q Consensus 59 sarlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~ 138 (171)
..-.+|||+-+..- ...|=.||+||+|.+++||--..|-.|.+.+-|.++. |-.. ++...
T Consensus 4 ~~~~~G~L~K~g~~--------------~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~-v~~~-----~~~~~ 63 (127)
T 1fgy_A 4 NPDREGWLLKLGGR--------------VKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLS-IREV-----LDPRK 63 (127)
T ss_dssp SCSEEEEEEEECSS--------------SCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCE-EEEE-----CCSSC
T ss_pred CCceEeEEEEECCC--------------CCCeEEEEEEEECCEEEEeCCCCCCCcceEEECCceE-EEEc-----cCCCC
Confidence 34568999988421 4579999999999999999988889999999998763 2222 23355
Q ss_pred EEEEEEEeecc---------------------eeeeecccceeeeeeeeeee
Q 030783 139 QYCFYILTRHG---------------------LRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 139 ~yaFyIlTrhG---------------------LR~ECSS~skiQVdswLs~l 169 (171)
.++|-|.+..| -.|.++..++-..+.|+.+|
T Consensus 64 ~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al 115 (127)
T 1fgy_A 64 PNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSI 115 (127)
T ss_dssp SSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHH
T ss_pred CceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHH
Confidence 78999987542 23555556666677787665
No 18
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.17 E-value=9.6e-07 Score=60.17 Aligned_cols=96 Identities=18% Similarity=0.225 Sum_probs=69.9
Q ss_pred hhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeee--cceeEeEeee-CCCCCCCcceeeh--hhhccCC--CCc
Q 030783 59 SARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLH--GSCIFFYLLS-TDLSPQDSTVLSD--VVEVASL--PSI 131 (171)
Q Consensus 59 sarlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~--G~cif~yL~s-TDLsPqdStllsd--IVEvg~l--P~~ 131 (171)
....+|||+-|.. -...|=.||+||. |.+++||--. .|-.|.+++-|.+ |+++... |.-
T Consensus 17 ~~~~~G~L~K~g~--------------~~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~~~v~~~~~~~~p~~ 82 (129)
T 1x1g_A 17 TVVKQGYLAKQGH--------------KRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTG 82 (129)
T ss_dssp EEEEEEEEEEECS--------------SSSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSS
T ss_pred CEEEEEEEEEECC--------------CCCCeeeEEEEEeCCCCeEEEeCCCCcCCccceEEECcCCEEEEeCCCCCccc
Confidence 3457899998842 1668999999999 5788888655 7889999999986 4444433 432
Q ss_pred cccCCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 132 TRENGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 132 ~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
... ....++|.|.|..+-.|.++..++-+.+.|+.+|
T Consensus 83 ~~~-~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al 119 (129)
T 1x1g_A 83 VKG-NVQGNLFKVITKDDTHYYIQASSKAERAEWIEAI 119 (129)
T ss_dssp CSS-CCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHH
T ss_pred ccC-CCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHH
Confidence 221 1146899999988766777778888888898765
No 19
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.16 E-value=9.7e-07 Score=58.81 Aligned_cols=95 Identities=16% Similarity=0.154 Sum_probs=68.9
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeee--cceeEeEeeeCCCCCCCcceeehhhhccCCCCc-cc-cC
Q 030783 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLH--GSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSI-TR-EN 135 (171)
Q Consensus 60 arlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~--G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~-~r-Ed 135 (171)
...+|||+-+.. -..-|=.||+||. |.+++||--..|-.|.+.+-|.++..|-..+.. .. ..
T Consensus 8 ~~~~G~L~K~g~--------------~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~ 73 (117)
T 1v5u_A 8 RSYEGILYKKGA--------------FMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKT 73 (117)
T ss_dssp SSEEEEEEECCC--------------SSSCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSS
T ss_pred ccEEEEEEecCC--------------CCCCceeeEEEEECCCCEEEEeecCCCCccceEEEccCcEEEeecCcccccccc
Confidence 357899998852 1457999999999 889999998889999999999998766543322 11 22
Q ss_pred CceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 136 GEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 136 ge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
....++|-|.|.+. .|.....++-..+.|+.+|
T Consensus 74 ~~~~~~F~i~~~~r-~~~l~a~s~~e~~~Wi~al 106 (117)
T 1v5u_A 74 VDEKAFFDVKTTRR-VYNFCAQDVPSAQQWVDRI 106 (117)
T ss_dssp SCTTTCEEEEESSC-EEEEECSSHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCc-eEEEECCCHHHHHHHHHHH
Confidence 33468999977544 4545556666777787765
No 20
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=98.12 E-value=6.7e-07 Score=60.67 Aligned_cols=93 Identities=19% Similarity=0.316 Sum_probs=68.0
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceEE
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~y 140 (171)
-.+|||+-+.. .-..-|-.||+||.|.+++||--..|-.|.+.+-|.++ .|-..+. .+.....|
T Consensus 22 ~~~G~L~K~~~-------------~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~-~v~~~~~--~~~~~~~~ 85 (128)
T 2dkp_A 22 VRRGWLYKQDS-------------TGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSF-QIALLTS--EDHINRKY 85 (128)
T ss_dssp CEEEEEEEECC-------------SSSCCEEEEEEEEETTEEEEESSTTCCSEEEEECGGGS-EEEECCG--GGCCSSCS
T ss_pred EEEEEEEEeCC-------------CCCCCceeEEEEEeCCEEEEECCCCCcccceEEEcCce-EEEEcCC--cccCCCCe
Confidence 46899998753 12457999999999999999998888899988888765 2322221 11223468
Q ss_pred EEEEEeecceeeeecccceeeeeeeeeee
Q 030783 141 CFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
+|-|.|..+=.|.....++-+.+.|+.+|
T Consensus 86 ~F~i~~~~~r~~~l~a~s~~e~~~Wi~al 114 (128)
T 2dkp_A 86 AFKAAHPNMRTYYFCTDTGKEMELWMKAM 114 (128)
T ss_dssp EEEEECSSSCCEEEECSSHHHHHHHHHHH
T ss_pred EEEEEcCCCCEEEEEcCCHHHHHHHHHHH
Confidence 99999876666666666777788888765
No 21
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=98.07 E-value=9e-07 Score=60.68 Aligned_cols=94 Identities=20% Similarity=0.280 Sum_probs=65.0
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCC---CCCCCcceeehhh--hccCCCCccccC
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTD---LSPQDSTVLSDVV--EVASLPSITREN 135 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTD---LsPqdStllsdIV--Evg~lP~~~rEd 135 (171)
-.+|||+.+.. |. -...|-.||+||.|.+++||-...| -.|.+++-|.++. +|...|. +.
T Consensus 6 ~~~G~L~K~~~-----~~-------~~~~WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~---~~ 70 (134)
T 2y7b_A 6 EERGFLTIFED-----VS-------GFGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANR---EF 70 (134)
T ss_dssp CEEEEEEEEEE-----ET-------TEEEEEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECCT---TT
T ss_pred eEEeeEEEEcC-----CC-------CCCCcEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCccccccccch---hh
Confidence 46899999853 11 2568999999999999999986666 8999999998864 3544432 11
Q ss_pred CceEEEEEEEeec----------------c---eeeeecccceeeeeeeeeee
Q 030783 136 GEMQYCFYILTRH----------------G---LRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 136 ge~~yaFyIlTrh----------------G---LR~ECSS~skiQVdswLs~l 169 (171)
....++|-|.|.- | -.|..+..++-+.+.|+.+|
T Consensus 71 ~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al 123 (134)
T 2y7b_A 71 CARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKL 123 (134)
T ss_dssp CCCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHH
T ss_pred ccCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHH
Confidence 2346899998731 1 13555555566677787665
No 22
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=98.04 E-value=2.7e-06 Score=55.74 Aligned_cols=96 Identities=14% Similarity=0.255 Sum_probs=65.1
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCC------CCCCCcceeehh-hhccCCCCcccc
Q 030783 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTD------LSPQDSTVLSDV-VEVASLPSITRE 134 (171)
Q Consensus 62 lsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTD------LsPqdStllsdI-VEvg~lP~~~rE 134 (171)
++|||+-+..|.. +|.+ .-...|-.||+||+|.+++||--..| ..|..++-+... |++. | +
T Consensus 1 ~eG~L~kk~~~~~-~gk~-----~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~--~----~ 68 (106)
T 1btn_A 1 MEGFLNRKHEWEA-HNKK-----ASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVA--L----D 68 (106)
T ss_dssp CEEEEEEEEEECS-TTCB-----CSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEEC--S----S
T ss_pred CccEEEEEEEEeC-CCcc-----CCCCChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEEEc--c----c
Confidence 4799999987652 2332 23567999999999999999976553 224444434332 2221 1 2
Q ss_pred CCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 135 NGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 135 dge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
.....++|-|.|..|-.|..+..+.-..+.|+.+|
T Consensus 69 ~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai 103 (106)
T 1btn_A 69 YKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAI 103 (106)
T ss_dssp CCSSSSEEEEECTTSCEEEEECSSHHHHHHHHHHH
T ss_pred ccCCccEEEEEecCCCEEEEECCCHHHHHHHHHHH
Confidence 33446899999988877777777788888888775
No 23
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=98.02 E-value=2.3e-06 Score=60.33 Aligned_cols=95 Identities=13% Similarity=0.190 Sum_probs=57.5
Q ss_pred HhhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeC----CCCC-----CCcceeehhhhccC
Q 030783 57 LRSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLST----DLSP-----QDSTVLSDVVEVAS 127 (171)
Q Consensus 57 LRsarlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sT----DLsP-----qdStllsdIVEvg~ 127 (171)
++..-.+||||-|.. -+--|-+||+||.|.|+|||--.+ +-+| .+++-|+..+ |-.
T Consensus 9 ~~~~~k~G~L~K~g~--------------~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~-v~~ 73 (124)
T 2w2x_D 9 KDEHKQQGELYMWDS--------------IDQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYN-VVK 73 (124)
T ss_dssp ----CCEEEEEEEET--------------TTTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEE-EEE
T ss_pred hhhcceeEEEEEECC--------------CCCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCE-EEE
Confidence 455668999998851 145799999999999999998643 2233 5556565544 212
Q ss_pred CCCccccCCceEEEEEEEeecc--eeeeecccceeeeeeeeeee
Q 030783 128 LPSITRENGEMQYCFYILTRHG--LRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 128 lP~~~rEdge~~yaFyIlTrhG--LR~ECSS~skiQVdswLs~l 169 (171)
.|. +...-.|+|-|.+.++ -.|..+..+.-+.+.|+.+|
T Consensus 74 ~~~---~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai 114 (124)
T 2w2x_D 74 APQ---GKNQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSI 114 (124)
T ss_dssp CTT---CBTTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHH
T ss_pred ccC---CcCCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHH
Confidence 221 2234579999988654 22444444555666777654
No 24
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.99 E-value=1.6e-06 Score=60.99 Aligned_cols=94 Identities=15% Similarity=0.263 Sum_probs=65.1
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEee-ecceeEeEeeeCCCCCCCcceee-hhhhc--cC-CCCccc-cC
Q 030783 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVL-HGSCIFFYLLSTDLSPQDSTVLS-DVVEV--AS-LPSITR-EN 135 (171)
Q Consensus 62 lsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl-~G~cif~yL~sTDLsPqdStlls-dIVEv--g~-lP~~~r-Ed 135 (171)
.+|||+-++. -+.-|=.||.|| ++.|++||--..|-.|.+.+++. ++++| |. ...... +.
T Consensus 10 ~~G~L~K~g~--------------~~k~WkkRwFVL~~~~~L~Yyk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~ 75 (130)
T 2d9v_A 10 RGGWLWRQSS--------------ILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEG 75 (130)
T ss_dssp EEEEEEEECS--------------SSCCEEEEEEEEETTTEEEEESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCSS
T ss_pred EEEEEEeecC--------------ccCCceeeEEEEccCCEEEEEeCCCCCCcCceEecccceeEEeccccccccCCCCC
Confidence 6899998732 245899999999 89999999877787888887665 33332 21 111112 22
Q ss_pred CceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 136 GEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 136 ge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
....++|-|.|..|=.|.....++-..+.|+.+|
T Consensus 76 ~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al 109 (130)
T 2d9v_A 76 RSRDGLLTVNLREGSRLHLCAETRDDAIAWKTAL 109 (130)
T ss_dssp CCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHH
T ss_pred CCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHH
Confidence 2335899999977766776677777788888765
No 25
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.99 E-value=1.9e-06 Score=62.15 Aligned_cols=97 Identities=16% Similarity=0.263 Sum_probs=67.0
Q ss_pred HhhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeee---cceeEeEee----eCCCCCCCcceeehhhhccCCC
Q 030783 57 LRSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLH---GSCIFFYLL----STDLSPQDSTVLSDVVEVASLP 129 (171)
Q Consensus 57 LRsarlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~---G~cif~yL~----sTDLsPqdStllsdIVEvg~lP 129 (171)
-|..+.+|||+.+.. .-+..|-.||.||. |.|+|||=- ..+=.|.+++.|..+..|-..+
T Consensus 12 ~~~~~~~G~L~K~g~-------------~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~ 78 (126)
T 1v5p_A 12 DRQNRICGFLDIEDN-------------ENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIAT 78 (126)
T ss_dssp CCCCCEECCEEEECT-------------TCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECC
T ss_pred cCCCceEEEEEEeCC-------------CCCCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCC
Confidence 355678999998742 11468999999999 777777765 5677899999999877776544
Q ss_pred CccccCCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 130 SITRENGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 130 ~~~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
.- +..+-+|+|-|-|-.- .|-.+..++-+.+.|+.+|
T Consensus 79 ~~--~~~~~~~~F~i~t~~r-~y~l~A~s~~e~~~Wi~al 115 (126)
T 1v5p_A 79 PK--QKPKTPFCFVINALSQ-RYFLQANDQKDLKDWVEAL 115 (126)
T ss_dssp TT--TSCSCSSEEEEECSSC-EEEEECSSHHHHHHHHHHH
T ss_pred cc--cCCCCCEEEEEECCCE-EEEEECCCHHHHHHHHHHH
Confidence 21 1224579997765433 2555555666777787664
No 26
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=97.98 E-value=2.3e-06 Score=70.55 Aligned_cols=126 Identities=20% Similarity=0.268 Sum_probs=72.9
Q ss_pred eHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHh--------------hhhcceeEEEeeecccCCCCCCCCCCCCcccc
Q 030783 25 TATELESLRSELADLEDREAHLKAQLEHVDEILR--------------SARLSGYLYIRTRWKPLPGEPPPIDDTDVDDW 90 (171)
Q Consensus 25 t~~EvesLR~Ela~~eEREa~lkAqLehvDEvLR--------------sarlsgYLyiRtRW~aLpgEpppiDDtdVDDW 90 (171)
...+++++|.++....++-......+.+.+...- ...-.||||.|+.- |.+ .-.|
T Consensus 252 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~G~L~k~~~~----g~~-------~~~W 320 (407)
T 4h8s_A 252 VADMVQSIQVELEAEAEKMRVSQQELLSVDESVYTPDSDVAAPQINRNLIQKAGYLNLRNKT----GLV-------TTTW 320 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCTTTTCTTSCSSSCCCCCSCSCCEEEEEEEEEC----SSS-------CEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCCcccccccCCcceeeceeeeeccC----CCC-------CCCc
Confidence 4456777777776555544444444444333221 11346999999862 322 2459
Q ss_pred ceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccc-cCCceEEEEEEEeeccee-eeecccceeeeeeeeee
Q 030783 91 LPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITR-ENGEMQYCFYILTRHGLR-IECSSISKIQVLVILIY 168 (171)
Q Consensus 91 lpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~r-Edge~~yaFyIlTrhGLR-~ECSS~skiQVdswLs~ 168 (171)
-.||.||+|.+++||- ..+-.|...+-|.. -+... ++.+-+|||-|.|-.|-| |.-.-.++-..+.|+.|
T Consensus 321 ~rrwfvl~~~~l~y~~-~~~~~~~~~~~l~~-------~~v~~~~~~~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~a 392 (407)
T 4h8s_A 321 ERLYFFTQGGNLMCQP-RGAVAGGLIQDLDN-------CSVMAVDCEDRRYCFQITTPNGKSGIILQAESRKENEEWICA 392 (407)
T ss_dssp EEEEEEECSSCEECCC-TTCSSCCCCBCSSC-------CEEEEECCTTCSSEEEEECTTSSCCEEEECSSSHHHHHHHHH
T ss_pred eEEEEEEECCEEEEEe-CCCCCCCeEEECCc-------eEEEECCCCCCCceEEEEecCCCceEEEEcCCHHHHHHHHHH
Confidence 9999999999998884 44555544332211 01111 334568999999865533 33233444555677766
Q ss_pred e
Q 030783 169 L 169 (171)
Q Consensus 169 l 169 (171)
|
T Consensus 393 i 393 (407)
T 4h8s_A 393 I 393 (407)
T ss_dssp H
T ss_pred H
Confidence 5
No 27
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.95 E-value=2.2e-06 Score=58.69 Aligned_cols=88 Identities=19% Similarity=0.296 Sum_probs=67.3
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeec--ceeEeEeeeCCC--CCCCcceeehhhhccCCCCccccC
Q 030783 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHG--SCIFFYLLSTDL--SPQDSTVLSDVVEVASLPSITREN 135 (171)
Q Consensus 60 arlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G--~cif~yL~sTDL--sPqdStllsdIVEvg~lP~~~rEd 135 (171)
...+|||+-+.. -+.-|=.||+||.| .+++||--..|- .|.+++-|.+++ |.. +
T Consensus 8 ~~~~G~L~K~~~--------------~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~~~-v~~-------~ 65 (120)
T 2d9x_A 8 ENVYGYLMKYTN--------------LVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAV-ISP-------S 65 (120)
T ss_dssp CCCEEEEEEEEE--------------TTTEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTTCC-EEC-------C
T ss_pred CcEEEEEEecCC--------------CCCCceEEEEEEECCCCEEEEEecCcccCCCccceEEcceEE-EEe-------c
Confidence 357899999873 24579999999996 588888776664 899999998864 322 2
Q ss_pred CceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 136 GEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 136 ge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
++..++|-|.|..|=.|.....++-+.+.|+.+|
T Consensus 66 ~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al 99 (120)
T 2d9x_A 66 DEDSHTFTVNAASGEQYKLRATDAKERQHWVSRL 99 (120)
T ss_dssp SSSSSCEEECCSSSCCEEECCSSHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHH
Confidence 2345899999988777777777888888888765
No 28
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=97.94 E-value=2e-06 Score=65.93 Aligned_cols=94 Identities=15% Similarity=0.259 Sum_probs=65.6
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhcc--CCCCccc-cCCc
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVA--SLPSITR-ENGE 137 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg--~lP~~~r-Edge 137 (171)
.++||||.|+.- ..-|=.||.||+|.|+|||-...|-.|.+.+.|.++..+. ...+.+. ....
T Consensus 169 ~~~G~L~k~~~~--------------~k~WkkR~fvL~~~~L~yyk~~~~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~ 234 (291)
T 3tca_A 169 ELEGALYLKEDG--------------KKSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQFENVNIYYGIQCKMKYKAP 234 (291)
T ss_dssp CCEEEEEEECTT--------------SSCEEEEEEEECSSEEEECCTTCCSSTTTCEEEEEGGGCEEEEECSHHHHHCCS
T ss_pred ceEEEEEEeCCC--------------CCCceEEEEEEeCCEEEEEecCccccccCceeeccceeEEEEecCccccccCCC
Confidence 478999998531 2469999999999999999999999999999998764432 2222222 3345
Q ss_pred eEEEEEEEeecc------eeeeecccceeeeeeeeeee
Q 030783 138 MQYCFYILTRHG------LRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 138 ~~yaFyIlTrhG------LR~ECSS~skiQVdswLs~l 169 (171)
..|+|-|.+.++ ..|-|. .++-..+.|+.||
T Consensus 235 ~~~~F~i~~~~~~~~~~~~~~l~A-~s~~e~~~Wi~ai 271 (291)
T 3tca_A 235 TDHCFVLKHPQIQKESQYIKYLCC-DDARTLSQWVMGI 271 (291)
T ss_dssp SSCEEEEECTTCCSCCTTSEEEEC-SSHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCCCCceEEEEEC-CCHHHHHHHHHHH
Confidence 689999987432 233343 3444667787765
No 29
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=97.94 E-value=3.2e-06 Score=65.60 Aligned_cols=98 Identities=16% Similarity=0.227 Sum_probs=72.7
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceE
Q 030783 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQ 139 (171)
Q Consensus 60 arlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~ 139 (171)
...+|||+-+..-..+ -+.-|=.||+||+|.+++||--..|-.|.+.+-|.++.-+- .|+. ..++...
T Consensus 106 v~k~G~L~Kkg~~~~~----------~~k~WkkRwfVL~~~~L~Yyk~~~~~~p~g~I~L~~~~~v~-~~~~-~~~~~k~ 173 (211)
T 1u5e_A 106 VIKAGYLEKRRKDHSF----------LGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRM-NNTL-RKDGKKD 173 (211)
T ss_dssp EEEEEEEEEEEHHHHT----------TTCCCEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEE-CGGG-CSSTTGG
T ss_pred ccEEEEEEEECCCCCc----------CCCCcEeEEEEEECCEEEEEcCCCCccceEEEEeCCcEEEE-cCCc-cccCCCC
Confidence 4578999998753211 13479999999999999999999999999999998876552 2221 2344456
Q ss_pred EEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 140 YCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 140 yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
++|.|.|..+=.|.....++-..+.|+.+|
T Consensus 174 ~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL 203 (211)
T 1u5e_A 174 CCFEICAPDKRIYQFTAASPKDAEEWVQQL 203 (211)
T ss_dssp GEEEEECSSSCEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEEcCCCCEEEEEcCCHHHHHHHHHHH
Confidence 899999976666766666777778888765
No 30
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.93 E-value=4.4e-06 Score=57.52 Aligned_cols=90 Identities=23% Similarity=0.259 Sum_probs=66.6
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecc--eeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCc
Q 030783 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGS--CIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGE 137 (171)
Q Consensus 60 arlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~--cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge 137 (171)
..++|||+-+..- .-+.-|=.||+||.|. +|+||-...|-.|.+++-|.++..+-. ...
T Consensus 8 ~~~~G~L~K~g~~------------~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~-------~~~ 68 (119)
T 2dhk_A 8 KKLCGYLSKFGGK------------GPIRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCK-------ADA 68 (119)
T ss_dssp CCCEEEEEECSCS------------SSSCCCEEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGCEEEEC-------TTG
T ss_pred CcEEEEEEecCCC------------CCCCCceeEEEEEECCccEEEEECCCCCcccccEEECCCCEEEec-------CCC
Confidence 3578999987420 1246799999999999 999999889999999999998776542 122
Q ss_pred eEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 138 MQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 138 ~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
..++|-|.|. +=.|.....++-+.+.|+.+|
T Consensus 69 ~~~~F~i~~~-~r~~~l~a~s~~e~~~Wi~al 99 (119)
T 2dhk_A 69 EEGIFEIKTP-SRVITLKAATKQAMLYWLQQL 99 (119)
T ss_dssp GGCEEEEECS-SCCEEEECSSHHHHHHHHHHH
T ss_pred CCCEEEEEeC-CcEEEEECCCHHHHHHHHHHH
Confidence 3579999886 445555555666777887765
No 31
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.90 E-value=5.4e-06 Score=60.18 Aligned_cols=87 Identities=14% Similarity=0.232 Sum_probs=61.9
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceEEE
Q 030783 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQYC 141 (171)
Q Consensus 62 lsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~ya 141 (171)
.+|||+.|. -+..|=.||.||.+.|+|||--..|-.|.+++.|.... |-.. ...+..|+
T Consensus 10 k~GwL~K~g---------------~~k~WkrRWfVLk~~~L~yyk~~~~~~p~G~I~L~~~~-v~~~-----~~~~~~~~ 68 (130)
T 1v88_A 10 MADWLKIRG---------------TLKSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACE-IIER-----PSKKDGFC 68 (130)
T ss_dssp EEEEEEECC---------------SSSSCEEEEEEEETTEEEEESCSSSCCCCEEEECSSCE-ECCC-----CTTTSSCE
T ss_pred EEeEEEEeC---------------CCCCceEEEEEEECCEEEEECCCCCCCceEEEEcCCCE-EEEC-----CCCCCCeE
Confidence 689999853 14579999999999999999999999999999997643 3111 22334599
Q ss_pred EEEEeecc----------------------ee-eeecccceeeeeeeeeee
Q 030783 142 FYILTRHG----------------------LR-IECSSISKIQVLVILIYL 169 (171)
Q Consensus 142 FyIlTrhG----------------------LR-~ECSS~skiQVdswLs~l 169 (171)
|-|.+... -| |..+..++-+.+.|+.||
T Consensus 69 F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai 119 (130)
T 1v88_A 69 FKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDAL 119 (130)
T ss_dssp EEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHH
T ss_pred EEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHH
Confidence 99986321 01 444455566777887665
No 32
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.89 E-value=5.2e-06 Score=55.85 Aligned_cols=86 Identities=22% Similarity=0.235 Sum_probs=57.8
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceee--hh-hhccCCCCccccCC
Q 030783 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLS--DV-VEVASLPSITRENG 136 (171)
Q Consensus 60 arlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStlls--dI-VEvg~lP~~~rEdg 136 (171)
...+|||+.+ -..-|=.||.||.|.+++||--..| .|...+.+. .. |+. .| +.
T Consensus 8 ~~~~G~L~K~----------------~~k~Wk~RwfvL~~~~L~yyk~~~~-~~~~~~~i~l~~~~v~~--~~-----~~ 63 (107)
T 2cof_A 8 LETSSYLNVL----------------VNSQWKSRWCSVRDNHLHFYQDRNR-SKVAQQPLSLVGCEVVP--DP-----SP 63 (107)
T ss_dssp CTTCCEEEEE----------------ETTEEEEEEEEECSSCEEEECSSTT-CSEEEEEECTTTCEEEC--CC-----BT
T ss_pred CcEeEEEEEe----------------cCCCcceEEEEEECCEEEEEeCCcc-cCCCeeEEeccceEEEE--CC-----CC
Confidence 4579999986 2457999999999999999986665 444433332 21 222 12 23
Q ss_pred ceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 137 EMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 137 e~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
+..|+|-|.|..+=.|..+..++-+.+.|+.+|
T Consensus 64 ~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al 96 (107)
T 2cof_A 64 DHLYSFRILHKGEELAKLEAKSSEEMGHWLGLL 96 (107)
T ss_dssp TBSCEEEEEETTEEEEEEECSSHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHH
Confidence 456899999864434666666677777888765
No 33
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=97.89 E-value=5.9e-06 Score=57.26 Aligned_cols=93 Identities=18% Similarity=0.234 Sum_probs=62.4
Q ss_pred ceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehh-hhccCCCCccccCCceEEE
Q 030783 63 SGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDV-VEVASLPSITRENGEMQYC 141 (171)
Q Consensus 63 sgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdI-VEvg~lP~~~rEdge~~ya 141 (171)
.|||+-+ +|..+ .-+.-|=+||+||.|.|+|||--..|-.|..++-|... ++. ....++.+-.++
T Consensus 3 eG~L~kK------~g~~~----~~~k~Wk~rwfvL~~~~L~~yk~~~~~~p~~~i~l~~~~~~~----~~~~~~~~r~~~ 68 (112)
T 3cxb_B 3 EGMLHYK------AGTSY----LGKEHWKTCFVVLSNGILYQYPDRTDVIPLLSVNMGGEQCGG----CRRANTTDRPHA 68 (112)
T ss_dssp EEEEEEC------CSCCC----SSCCCCEEEEEEEETTEEEEESSSSCCSCSEEEETTC-CEEE----EEECCCSSCTTE
T ss_pred eEEEEEe------CCCCC----CCCCCceEEEEEEECCEEEEECCCCCCCccceEEecCCEEEe----eeccCCCCCCeE
Confidence 6999866 23321 14568999999999999999998888888876544321 210 011133344689
Q ss_pred EEEEeecceeeeecccceeeeeeeeeee
Q 030783 142 FYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 142 FyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
|-|.+..|-.|.-+..+.-+.+.|+.+|
T Consensus 69 F~l~~~~~~~y~f~A~s~ee~~~Wi~ai 96 (112)
T 3cxb_B 69 FQVILSDRPCLELSAESEAEMAEWMQHL 96 (112)
T ss_dssp EEEEETTSCCEEEECSSHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEEEcCCHHHHHHHHHHH
Confidence 9999877756655556666777887665
No 34
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=97.86 E-value=2.3e-06 Score=58.42 Aligned_cols=93 Identities=13% Similarity=0.130 Sum_probs=63.3
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeec-ceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceE
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHG-SCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQ 139 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G-~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~ 139 (171)
..+|||+-+.. -+.-|=.||+||.| .+++||--..|-.|.+.+-|..+.-++.. ....+....
T Consensus 9 ~~~G~L~K~g~--------------~~k~WkkRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~--~~~~~~~~~ 72 (125)
T 1unq_A 9 VKEGWLHKRGE--------------YIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQ--LMKTERPRP 72 (125)
T ss_dssp EEEEEEEEECS--------------SSCCEEEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCE--EEEECSSST
T ss_pred eEEeeEEeccC--------------CccCccCcEEEEecCCEEEEEeCCCCCCCCceeEccceeEEeee--ecccccCCC
Confidence 46899998743 14679999999996 59999988888778888777765433210 111223446
Q ss_pred EEEEEEee---cceeeeecccceeeeeeeeeee
Q 030783 140 YCFYILTR---HGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 140 yaFyIlTr---hGLR~ECSS~skiQVdswLs~l 169 (171)
++|-|.+. .+-.|..+..++-..+.|+.+|
T Consensus 73 ~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al 105 (125)
T 1unq_A 73 NTFIIRCLQWTTVIERTFHVETPEEREEWTTAI 105 (125)
T ss_dssp TEEEEEEEETTEEEEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEEecCCCCceeEEEEeCCHHHHHHHHHHH
Confidence 89999873 3444555566677778888765
No 35
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=97.72 E-value=2e-05 Score=51.52 Aligned_cols=84 Identities=17% Similarity=0.182 Sum_probs=56.8
Q ss_pred ceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCC--CCCCCcceeehhhhccCCCCccccCCceEE
Q 030783 63 SGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTD--LSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (171)
Q Consensus 63 sgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTD--LsPqdStllsdIVEvg~lP~~~rEdge~~y 140 (171)
+|||+-++.- +.-|=.||+||+|.+++||-...| ..|.+.+-|.+..-+ .+.+..+
T Consensus 4 ~G~L~K~g~~--------------~k~WkkR~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~~~~~--------~~~~~~~ 61 (94)
T 2rsg_A 4 CGVLSKWTNY--------------IHGWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSKAVIT--------PHDFDEC 61 (94)
T ss_dssp EEEEEEESSS--------------TTCEEEEEEEEETTEEEEESSTTGGGTCCSEEEETTTCEEE--------ECSSCSS
T ss_pred EEEEEEeCCC--------------CCCceEEEEEEECCEEEEEEecccccccceeeEecceeeee--------cCcccce
Confidence 7999987531 356999999999999999975544 346666655443211 1223346
Q ss_pred EEEEEeecceeeeecccceeeeeeeeeee
Q 030783 141 CFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
+|-|.|. |=.|.+...+.-..+.|+.+|
T Consensus 62 ~F~i~~~-~r~~~l~A~s~~e~~~Wi~aL 89 (94)
T 2rsg_A 62 RFDISVN-DSVWYLRAQDPDHRQQWIDAI 89 (94)
T ss_dssp EEEEEET-TEEEEEECCSSCCTHHHHHHH
T ss_pred eEEEEeC-CeEEEEECCCHHHHHHHHHHH
Confidence 8888775 445666666777788888775
No 36
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.70 E-value=1.3e-05 Score=60.81 Aligned_cols=92 Identities=18% Similarity=0.259 Sum_probs=65.4
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEe----eeCCCCCCCcceeehhh--hccCCCCcccc
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYL----LSTDLSPQDSTVLSDVV--EVASLPSITRE 134 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL----~sTDLsPqdStllsdIV--Evg~lP~~~rE 134 (171)
--+||||-+.+ . -+..|=-||.||.|.|+|||= ...+-.|.+++.|.... ++.+-| +
T Consensus 9 ~~~G~L~KqG~-------~------~~K~WKrRwFVL~~~~LyYfk~~~~~~~~~~p~G~I~L~g~tV~~~~~~~----~ 71 (126)
T 1wi1_A 9 KHSGYLWAIGK-------N------VWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQP----G 71 (126)
T ss_dssp EEEEEEEEECS-------S------SCCSCEEEEEEEEEEETTEEEEEECCSSSSCCSEEEECSSCEEEECCCCS----S
T ss_pred ceeEEEEEeCC-------C------cccccceEEEEEeCCEEEEEEcccccccCCCCceEEECCCcEEEEecCCc----c
Confidence 35799998743 0 123799999999999999997 67788999999887631 333333 1
Q ss_pred CCceEEEEEEEeecceeeeecccceeeeeeeeeeec
Q 030783 135 NGEMQYCFYILTRHGLRIECSSISKIQVLVILIYLY 170 (171)
Q Consensus 135 dge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l~ 170 (171)
...-+|+|-|.+ +|=+|-=+..++-....|+.||+
T Consensus 72 ~~~~k~~F~~v~-~~~ty~~~Adseee~~~WikAi~ 106 (126)
T 1wi1_A 72 LEGGRAFFNAVK-EGDTVIFASDDEQDRILWVQAMY 106 (126)
T ss_dssp CCSCSSEEEEEC-SSCEEEEECSSHHHHHHHHHHHH
T ss_pred cccCceEEEEec-CCceEEEEcCCHHHHHHHHHHHH
Confidence 223579998875 57777766666777777877664
No 37
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=97.70 E-value=3.5e-05 Score=57.04 Aligned_cols=99 Identities=15% Similarity=0.071 Sum_probs=68.6
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCC-CCCCcceeehhhhccCCCCccc-cCCce
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDL-SPQDSTVLSDVVEVASLPSITR-ENGEM 138 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDL-sPqdStllsdIVEvg~lP~~~r-Edge~ 138 (171)
=+.|||+-|++=..-- -.-.|=.||+||.+.+++||=-..|- .|.+++.|+++..|-.++.-.. ...+.
T Consensus 16 i~EG~L~Kr~~~kk~~---------~~knWKkRwFVL~~~~L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~ 86 (164)
T 2lul_A 16 ILEEILIKRSQQKKKT---------SPLNYKERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQN 86 (164)
T ss_dssp EEEEEEEEECCCCSSS---------CCCCEEEEEEEEESSEEEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSCCSSS
T ss_pred eEEEEEEEecCCCCCC---------CCCCceeEEEEEECCEEEEEeccCcccccccEEEEeeeEEEEeccccccCccccc
Confidence 3679999987633221 23469999999999999999655554 4788999998866655544332 22345
Q ss_pred EEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 139 QYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 139 ~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
.++|-|.|...- |.+...+.-..+.|+.+|
T Consensus 87 ~~~f~i~t~~rt-~~l~A~s~~e~~~Wi~aL 116 (164)
T 2lul_A 87 KYPFQVVHDANT-LYIFAPSPQSRDLWVKKL 116 (164)
T ss_dssp CSEEEEECSSCE-EEEECSSHHHHHHHHHHH
T ss_pred ceeEEEecCCcE-EEEECCCHHHHHHHHHHH
Confidence 789999987754 444455666777887765
No 38
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.70 E-value=2e-05 Score=56.48 Aligned_cols=90 Identities=14% Similarity=0.082 Sum_probs=59.3
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeec---ceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCC
Q 030783 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHG---SCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENG 136 (171)
Q Consensus 60 arlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G---~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdg 136 (171)
..++|||+-+.+ +.-|=.|++||.| .|+|||--..|-.|++++.|... +|.. |.- .+..
T Consensus 8 ~~~~G~L~k~~~---------------~~~WkkrWfVL~~~~~~~Ly~Yk~~~d~~p~g~I~L~g~-~V~~-~~~-~~~~ 69 (112)
T 2coc_A 8 SLLCGPLRLSES---------------GETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSC-KLSV-PDP-EERL 69 (112)
T ss_dssp SSSEEEEEEESS---------------SSCEEEEEEECCTTCTTCEEEECCTTCSSSCSEECGGGC-EEEC-CCS-SSCC
T ss_pred ceEEEEEEecCC---------------CCCceEEEEEEECCCccEEEEECCCCccCcceEEEcCCC-EEEe-cCc-cccc
Confidence 457899998632 3459999999998 49999999999999999999443 2322 111 1233
Q ss_pred ceEEEEEEEeecc-eeeeecccceeeeeeeeeee
Q 030783 137 EMQYCFYILTRHG-LRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 137 e~~yaFyIlTrhG-LR~ECSS~skiQVdswLs~l 169 (171)
+-.|+|-|.+.+= ..|.|.| +-+.+.|+.+|
T Consensus 70 ~~~~~Fki~~~~~~y~f~A~s--~e~~~~Wl~al 101 (112)
T 2coc_A 70 DSGHVWKLQWAKQSWYLSASS--AELQQQWLETL 101 (112)
T ss_dssp SSSEEEEEEETTEEEEEEESS--HHHHHHHHHHH
T ss_pred CCCCEEEEecCCeEEEEEcCC--HHHHHHHHHHH
Confidence 4579999984322 2334433 33445666543
No 39
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.70 E-value=2.2e-05 Score=58.85 Aligned_cols=88 Identities=13% Similarity=0.138 Sum_probs=60.9
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhcc-CCCCccccCCceEE
Q 030783 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVA-SLPSITRENGEMQY 140 (171)
Q Consensus 62 lsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg-~lP~~~rEdge~~y 140 (171)
.+|||+-+. . -+..|=.||.||+|.|+|||--..|-.|.+.+-|.+.+.+- ..|. +...+
T Consensus 20 keG~L~Kkg-------~-------~~k~WkrRWFvLk~~~L~Yyk~~~d~~~~g~I~L~~~~~~~~~~~~-----~~~~~ 80 (149)
T 1x1f_A 20 FEGFLLIKR-------S-------GYREYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNST-----EKNCA 80 (149)
T ss_dssp EEEEEEEEC-------T-------TCCSCEEEEEEEETTEEEEESCSSCSSCSEECCCSSCCEEEECCCT-----TSCCC
T ss_pred EEEEEEEeC-------C-------CCCCceeEEEEEcCCEEEEEeCCCccccCcEEECCCceEEeeccCC-----CCcCc
Confidence 469999874 1 24689999999999999999999999999999888876541 1121 22358
Q ss_pred EEEEEeecceeeeecccceeeeeeeeeee
Q 030783 141 CFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
+|-|.|-..--+-| ..+.-..+.|+.+|
T Consensus 81 ~F~I~t~~r~~~f~-A~s~ee~~eWi~aI 108 (149)
T 1x1f_A 81 KFTLVLPKEEVQLK-TENTESGEEWRGFI 108 (149)
T ss_dssp EEEEECSSCCEEEE-CSSHHHHHHHHHHH
T ss_pred EEEEEcCCCEEEEE-cCCHHHHHHHHHHH
Confidence 99998764433333 33344455676554
No 40
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=97.69 E-value=1.8e-05 Score=56.95 Aligned_cols=99 Identities=14% Similarity=0.290 Sum_probs=58.3
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCC--CCCCCcceeeh---hhhccCCCCcccc
Q 030783 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTD--LSPQDSTVLSD---VVEVASLPSITRE 134 (171)
Q Consensus 60 arlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTD--LsPqdStllsd---IVEvg~lP~~~rE 134 (171)
....|||+.+..+.. .|.-.. .-+.-|-.||+||+|.+++||--..| -.|.+.+-|.. +|++. .+
T Consensus 3 v~~eG~L~~k~~~~~-~gkK~g---~~~k~WkkRwfvL~~~~L~yyk~~~~~~~~~~g~i~l~~~~~~~~~~------~~ 72 (168)
T 2j59_M 3 AAKEGWLHFRPLVTD-KGKRVG---GSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLIDIS------YS 72 (168)
T ss_dssp CCEEEEEEEEECC----------------CCEEEEEEEETTEEEEESCTTCC--------CEECSSCEEEEC------SS
T ss_pred CcEEEEEeeeeeccc-CCcccC---CCCCCceEEEEEEeCCEEEEEECCcccccccCCceEecccceEEEec------cc
Confidence 356899998875532 121100 13567999999999999999987755 56777766655 33332 22
Q ss_pred CCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 135 NGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 135 dge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
+....|+|-|.|... .|.....++-..+.|+.+|
T Consensus 73 ~~~~~~~F~I~t~~r-~~~l~A~s~~e~~~Wi~ai 106 (168)
T 2j59_M 73 ETKRKNVFRLTTSDC-ECLFQAEDRDDMLAWIKTI 106 (168)
T ss_dssp SCSCSSEEEEECSSC-EEEEECSSHHHHHHHHHHH
T ss_pred cCCCCCEEEEEeCCc-eEEEEcCCHHHHHHHHHHH
Confidence 344568999998763 4666666777777888765
No 41
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.67 E-value=9.6e-06 Score=57.08 Aligned_cols=95 Identities=17% Similarity=0.226 Sum_probs=68.6
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecc-----eeEeEeeeC-CCCCCCcceeehhhhccCCCCcccc
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGS-----CIFFYLLST-DLSPQDSTVLSDVVEVASLPSITRE 134 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~-----cif~yL~sT-DLsPqdStllsdIVEvg~lP~~~rE 134 (171)
-.+|||+.+..=..+ -.-..-|-.||+||.|. +++||--.. |-.|.+.+-|.++..+-. +
T Consensus 19 ~~~G~L~K~~~~~~~--------~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~~~~~~~-~----- 84 (150)
T 1wg7_A 19 TKHGWLYKGNMNSAI--------SVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQ-N----- 84 (150)
T ss_dssp CCEEEEEECCCCSSH--------HHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTCCEECC-C-----
T ss_pred eEEEEEEEecCCccc--------cccccCeeEEEEEEecCCCCceEEEEECCCCCCCCcCcEEecccCEEEec-C-----
Confidence 468999988420000 01245899999999997 888887777 888999999988765532 1
Q ss_pred CCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 135 NGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 135 dge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
.....|+|-|.|..+=.|.....++-..+.|+.+|
T Consensus 85 ~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al 119 (150)
T 1wg7_A 85 NKVRRFAFELKMQDKSSYLLAADSEVEMEEWITIL 119 (150)
T ss_dssp CSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHH
T ss_pred CCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHH
Confidence 23457899999986656666667777888888765
No 42
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=97.66 E-value=2.7e-05 Score=58.26 Aligned_cols=94 Identities=19% Similarity=0.368 Sum_probs=65.6
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeC---------CCCCCCcceeeh-hhhccCCCCc
Q 030783 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLST---------DLSPQDSTVLSD-VVEVASLPSI 131 (171)
Q Consensus 62 lsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sT---------DLsPqdStllsd-IVEvg~lP~~ 131 (171)
+.|||+-.+=.. -|..|. |--|-.|+|||.|.|+|||--.+ +-.|...+-|.. .||+.
T Consensus 3 ~~G~L~rk~llK--~G~k~~-----~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~~~----- 70 (126)
T 2dtc_A 3 MEGPLRRKTLLK--EGRKPA-----LSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQLP----- 70 (126)
T ss_dssp EEEEEEEEEEEB--TTBCCS-----SCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEECC-----
T ss_pred eeeeeeeeehhh--cCCccc-----ccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEEec-----
Confidence 578887664443 566653 67999999999999999998654 556776665543 34432
Q ss_pred cccCCceEEEEEEEee-cceeeeecccceeeeeeeeeee
Q 030783 132 TRENGEMQYCFYILTR-HGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 132 ~rEdge~~yaFyIlTr-hGLR~ECSS~skiQVdswLs~l 169 (171)
|+.+-.++|.|.+. +|-.|-=+..++...+.|+.+|
T Consensus 71 --e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai 107 (126)
T 2dtc_A 71 --DDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHL 107 (126)
T ss_dssp --CCTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHH
T ss_pred --CCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHH
Confidence 33344679999987 8977766666666667777654
No 43
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.64 E-value=1.2e-05 Score=54.72 Aligned_cols=85 Identities=13% Similarity=0.148 Sum_probs=56.6
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCccee-ehhhhccCCCCccccCCceE
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVL-SDVVEVASLPSITRENGEMQ 139 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStll-sdIVEvg~lP~~~rEdge~~ 139 (171)
..+|||+-+..- -..-|=.||+||+|.+++||--..+ .|-+.+.+ .-.|+ ...+..
T Consensus 11 ~~~G~L~K~~~~-------------~~k~WkkR~fvL~~~~L~yyk~~~~-~~~~~i~l~~~~v~---------~~~~~~ 67 (114)
T 2da0_A 11 EKKGYLLKKSDG-------------IRKVWQRRKCSVKNGILTISHATSN-RQPAKLNLLTCQVK---------PNAEDK 67 (114)
T ss_dssp CEEEEEEEECSS-------------SCCCEEEEEEEEETTEEEECCSSCC-SCCEEEETTTSEEE---------ECSSSS
T ss_pred cEEEEEEEeCCC-------------CCCCceeEEEEEeCCEEEEEcCCCC-CCCCEEEeeeeEEE---------ECCCCC
Confidence 468999998641 1257999999999999999976444 44444332 22222 122345
Q ss_pred EEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 140 YCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 140 yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
++|-|.|. +=.|.....++-..+.|+.+|
T Consensus 68 ~~F~I~~~-~r~~~l~a~s~~e~~~Wi~al 96 (114)
T 2da0_A 68 KSFDLISH-NRTYHFQAEDEQDYVAWISVL 96 (114)
T ss_dssp SCEEEEET-TEEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEEcC-CcEEEEEcCCHHHHHHHHHHH
Confidence 79999874 555666666777788888765
No 44
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=97.62 E-value=1.4e-05 Score=59.85 Aligned_cols=98 Identities=16% Similarity=0.176 Sum_probs=66.3
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEee----eCCCCCCCcceeehhhhccCC-----CCcc
Q 030783 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLL----STDLSPQDSTVLSDVVEVASL-----PSIT 132 (171)
Q Consensus 62 lsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~----sTDLsPqdStllsdIVEvg~l-----P~~~ 132 (171)
.+|||+-|+.-.. -.-+..|=.||.||.+.|++||=- ..|-.|.+++-|+++.-|..+ +.+.
T Consensus 5 keG~L~Kr~~~~~---------~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~ 75 (169)
T 1btk_A 5 LESIFLKRSQQKK---------KTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPE 75 (169)
T ss_dssp EEEEEEEECCCSS---------TTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGG
T ss_pred EEEEEEEecCCCC---------CcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchh
Confidence 4799998853211 012367999999999999999987 578899999999997544333 2222
Q ss_pred cc----------CCceE------EEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 133 RE----------NGEMQ------YCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 133 rE----------dge~~------yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
+. ....+ |+|-|.|... .|.++..+.-..+.|+.+|
T Consensus 76 ~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~r-t~yl~A~s~~E~~eWi~aI 127 (169)
T 1btk_A 76 RQIPRRGEESSEMEQISIIERFPYPFQVVYDEG-PLYVFSPTEELRKRWIHQL 127 (169)
T ss_dssp GCC---------CCTTHHHHCCCEEEEEEETTC-CEEEEESCHHHHHHHHHHH
T ss_pred cccccccCcccccccccccccccccEEEEeCCc-eEEEEcCCHHHHHHHHHHH
Confidence 21 00111 8999998754 4445556666777888765
No 45
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=97.51 E-value=2.1e-05 Score=55.89 Aligned_cols=95 Identities=21% Similarity=0.265 Sum_probs=64.7
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeee-----------CCCCCCCcceeehhh-hccCC
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLS-----------TDLSPQDSTVLSDVV-EVASL 128 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~s-----------TDLsPqdStllsdIV-Evg~l 128 (171)
...|||+-...+- .|.- + ..-|=.||+||.|.+++||--. .|-.|.+.+-|.... +.
T Consensus 13 ~k~G~L~kk~~~~--~G~~--~----~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~--- 81 (129)
T 2p0d_A 13 EKSGLLNMTKIAQ--GGRK--L----RKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAH--- 81 (129)
T ss_dssp EEEEEEEEEEEEE--TTEE--C----CCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEE---
T ss_pred eEEEEEEEeeecc--CCCc--C----CCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEE---
Confidence 4689998643221 2321 1 2689999999999999999876 467888888886643 22
Q ss_pred CCccccCCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 129 PSITRENGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 129 P~~~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
+ .+..+-.++|-|.|..|=.|.-+..+.-+.+.|+.+|
T Consensus 82 ~---~~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI 119 (129)
T 2p0d_A 82 G---RHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRAL 119 (129)
T ss_dssp C---TTSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHH
T ss_pred C---CCCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHH
Confidence 1 2333446899999998866666666677777887765
No 46
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=97.50 E-value=2.1e-05 Score=54.32 Aligned_cols=98 Identities=11% Similarity=0.189 Sum_probs=63.3
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCC--------CCcceeehhhhccCCCCcc
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSP--------QDSTVLSDVVEVASLPSIT 132 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsP--------qdStllsdIVEvg~lP~~~ 132 (171)
...|||+-+.-|.. +|..+ -...|=.||+||+|.+++||--..|-.| +.++-|... .|...
T Consensus 9 ~k~G~L~rK~~~~~-~gkk~-----~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~-~v~~~---- 77 (122)
T 1dro_A 9 GHEGYVTRKHEWDS-TTKKA-----SNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNA-AIEIA---- 77 (122)
T ss_dssp SEEEEEEEECSCCC-CCCTT-----CCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSC-CCEEC----
T ss_pred EEEEEEEEEEEEeC-CCccC-----CCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCC-EEEeC----
Confidence 35799987765432 23321 3578999999999999999986655444 233333221 11111
Q ss_pred ccCCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 133 RENGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 133 rEdge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
.+..+-.++|-|.|..|-.|.-...+.-+...|+.+|
T Consensus 78 ~d~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai 114 (122)
T 1dro_A 78 SDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSL 114 (122)
T ss_dssp CSSSSSTTEEEEECSSSCEEEEECSSSHHHHHHHHHH
T ss_pred CCCCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHH
Confidence 1223447899999988877776666777778888765
No 47
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=97.47 E-value=4.9e-05 Score=52.86 Aligned_cols=95 Identities=14% Similarity=0.168 Sum_probs=53.8
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEeeec-ceeEeEee-----------e------CCCCCCCcceeehhh
Q 030783 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHG-SCIFFYLL-----------S------TDLSPQDSTVLSDVV 123 (171)
Q Consensus 62 lsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G-~cif~yL~-----------s------TDLsPqdStllsdIV 123 (171)
.+|||+-|+ |. .-+..|=+||+||.+ .+++||-- . ++-.|.+.+.|++..
T Consensus 6 k~G~L~K~~------g~------~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~ 73 (128)
T 2rlo_A 6 KQSFLLKRS------GN------SLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISA 73 (128)
T ss_dssp EEEEEEEEC------SC------STTCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCC
T ss_pred eEEEEEEec------CC------CccCCccEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCcccccccc
Confidence 479999884 21 124579999999997 55666521 1 122244433333321
Q ss_pred hccCCCC-ccccCCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 124 EVASLPS-ITRENGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 124 Evg~lP~-~~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
-+ +.++ .....++..++|.|.|..|=.|.....+.-..+.|+.+|
T Consensus 74 ~~-~~~~~~~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai 119 (128)
T 2rlo_A 74 FG-PSASGSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAI 119 (128)
T ss_dssp CS-CCSCCCCSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHH
T ss_pred cc-ccccccccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHH
Confidence 11 1100 001112457899999987755666666666677887765
No 48
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=97.44 E-value=3.8e-05 Score=63.38 Aligned_cols=89 Identities=17% Similarity=0.359 Sum_probs=64.9
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceEE
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~y 140 (171)
..+|||+-+.. -+..|=.||.||.|.|++||--..|-.|.+.+-|.++. |-..+ +....+
T Consensus 214 ~k~G~L~K~g~--------------~~k~WkkRwFVL~~~~L~Yyk~~~~~~p~G~I~L~~~~-v~~~~-----~~~~~~ 273 (347)
T 2r09_A 214 DREGWLLKLGG--------------RVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLS-IREVE-----DPRKPN 273 (347)
T ss_dssp CEEEEEEEECS--------------SSCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCE-EEEEC-----CSSCSS
T ss_pred ccCCeeEecCC--------------CcccceeEEEEEcCCEEEEEcCCCccCCcEEEEcCCeE-EEEcc-----CCCCCC
Confidence 57899987732 15789999999999999999888889999999998764 33222 334578
Q ss_pred EEEEEeecc---------------------eeeeecccceeeeeeeeeee
Q 030783 141 CFYILTRHG---------------------LRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 141 aFyIlTrhG---------------------LR~ECSS~skiQVdswLs~l 169 (171)
+|-|.|..+ =.|..+..++-+.+.|+.+|
T Consensus 274 ~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI 323 (347)
T 2r09_A 274 CFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSI 323 (347)
T ss_dssp EEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHH
T ss_pred EEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHH
Confidence 999987632 23444555566677787665
No 49
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=97.38 E-value=0.00016 Score=59.24 Aligned_cols=91 Identities=19% Similarity=0.236 Sum_probs=53.8
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceEE
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~y 140 (171)
..+|||+-|+.-. + --..|-.||+||+|.|++||-. .|..|.+.+-|.... |-. .++.+-+|
T Consensus 279 ~k~G~L~K~~~~~-------~----~~~~WkkRwfvL~~~~L~y~k~-~~~~~~~~i~l~~~~-v~~-----~~~~~r~~ 340 (385)
T 2q13_A 279 RKAGYLNARNKTG-------L----VSSTWDRQFYFTQGGNLMSQAR-GDVAGGLAMDIDNCS-VMA-----VDCEDRRY 340 (385)
T ss_dssp CCEEEEEEC-------------------CCEEEEEEEETTEEEEECS-SCSSCEEEEECTTCE-EEE-----ECCTTCSS
T ss_pred cEEEEEEEecCCC-------C----CcCCceeEEEEEECCEEEEecC-CCcCCCceEEccceE-EEe-----ccccCCCc
Confidence 4579999875321 0 0126999999999999987766 676665544332210 101 12345679
Q ss_pred EEEEEeecc-eeeeecccceeeeeeeeeee
Q 030783 141 CFYILTRHG-LRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 141 aFyIlTrhG-LR~ECSS~skiQVdswLs~l 169 (171)
||-|.|..| =.|.-...++-..+.|+.+|
T Consensus 341 ~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai 370 (385)
T 2q13_A 341 CFQITSFDGKKSSILQAESKKDHEEWICTI 370 (385)
T ss_dssp EEEEECTTSCBCCCEECSSHHHHHHHHHHH
T ss_pred eEEEEeCCCCeEEEEEeCCHHHHHHHHHHH
Confidence 999999876 33433444455566777654
No 50
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=97.37 E-value=4e-05 Score=61.68 Aligned_cols=101 Identities=16% Similarity=0.290 Sum_probs=66.6
Q ss_pred hhcceeEEEeeecccC-CCCCCCCCCCCccccceeeEeeecceeEeEee------eCCCCCCCcceeehh-hhccCCCCc
Q 030783 60 ARLSGYLYIRTRWKPL-PGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLL------STDLSPQDSTVLSDV-VEVASLPSI 131 (171)
Q Consensus 60 arlsgYLyiRtRW~aL-pgEpppiDDtdVDDWlpRFVVl~G~cif~yL~------sTDLsPqdStllsdI-VEvg~lP~~ 131 (171)
..-+|||+.+..++-. -|.-|+. -+..|=.||+||.|.+++||-- ..|-.|.+.+-|.+. |+. .+
T Consensus 11 v~K~G~L~~k~~~~~~K~g~~~~~---~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~--~~-- 83 (263)
T 3a8p_A 11 VRKAGWLFFKPLVTLQKERKLELV---ARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQS--VP-- 83 (263)
T ss_dssp EEEEEEEEEEEEEEEEGGGEEEEC---TTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEE--CT--
T ss_pred eEEEEEeeecccccccCCCCccCc---cCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEE--CC--
Confidence 4568999976655211 1211111 1457999999999999999986 257788888777532 221 22
Q ss_pred cccCCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 132 TRENGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 132 ~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
++.+-.++|-|.|..|-.|.-+..+.-..+.|+.+|
T Consensus 84 --~~~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI 119 (263)
T 3a8p_A 84 --EHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAI 119 (263)
T ss_dssp --TCSSCSSEEEEECTTSCEEEEECSSHHHHHHHHHHH
T ss_pred --cCCCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHH
Confidence 233347999999987777777777777888898765
No 51
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.36 E-value=3.5e-05 Score=52.73 Aligned_cols=97 Identities=14% Similarity=0.166 Sum_probs=61.9
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCC----CCC--cceeeh-hhhccCCCCccc
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLS----PQD--STVLSD-VVEVASLPSITR 133 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLs----Pqd--Stllsd-IVEvg~lP~~~r 133 (171)
...|||+-+..+.. +|..+ -...|=.||+||+|.+++||--..|-. |.. ++-+.. ++++ . .
T Consensus 9 ~~eG~L~kk~~~~~-~gk~~-----~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~--~----~ 76 (123)
T 1wjm_A 9 QMEGMLCRKQEMEA-FGKKA-----ANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSV--A----F 76 (123)
T ss_dssp CEEEEEEEEEEEEE-TTEEC-----SCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEE--C----T
T ss_pred EEEEEEEEEEEEeC-CCccC-----CCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEEee--c----c
Confidence 46799998876532 22221 256899999999999999997665543 222 222221 1222 1 1
Q ss_pred cCCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 134 ENGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 134 Edge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
+..+-.++|-|.|..|-.|.-+..++-+...|+.+|
T Consensus 77 ~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai 112 (123)
T 1wjm_A 77 DYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVV 112 (123)
T ss_dssp TCSSCSSEEEEECSSSCEEEEECSSHHHHHHHHHHH
T ss_pred cccCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHH
Confidence 224457899999988766655556666777888765
No 52
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=97.23 E-value=0.0001 Score=51.94 Aligned_cols=98 Identities=15% Similarity=0.212 Sum_probs=62.5
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCC------------CCCcceeehhhhccCC
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLS------------PQDSTVLSDVVEVASL 128 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLs------------PqdStllsdIVEvg~l 128 (171)
.-.|||+-+.-+.. |--+ -.--|-+||+||+|.+++||--..+.+ |...+-|.. .-|...
T Consensus 9 ~keG~L~rK~~~~~--gkk~-----~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~-a~v~~~ 80 (124)
T 3pp2_A 9 DKAGVLHRTKTADK--GKRL-----RKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRG-ATLSWA 80 (124)
T ss_dssp CEEEEEEEEEEEET--TEEC-----SSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTT-CEEEEC
T ss_pred EEEEEEEEEEeccC--CccC-----CCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCC-CEEEec
Confidence 45799998775533 5442 345899999999999999997555543 333333322 112222
Q ss_pred CCccccCCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 129 PSITRENGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 129 P~~~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
| .+...-+++|-+.|..|-.|.=+..+.-+...|+.+|
T Consensus 81 ~---~d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI 118 (124)
T 3pp2_A 81 P---KDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAI 118 (124)
T ss_dssp C---GGGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHH
T ss_pred c---cccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHH
Confidence 2 1222336899999988877766666666777888765
No 53
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=97.17 E-value=5.8e-05 Score=60.91 Aligned_cols=86 Identities=19% Similarity=0.218 Sum_probs=64.9
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecc-------eeEeEeeeCC-----CCCCCcceeehhhhccC
Q 030783 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGS-------CIFFYLLSTD-----LSPQDSTVLSDVVEVAS 127 (171)
Q Consensus 60 arlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~-------cif~yL~sTD-----LsPqdStllsdIVEvg~ 127 (171)
...+|||+-+ .-|=.||.||.+. +++||=-..| -.|.+++-|+++..|..
T Consensus 10 v~k~G~L~K~------------------K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~ 71 (264)
T 1qqg_A 10 VRKVGYLRKP------------------KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINK 71 (264)
T ss_dssp EEEEEEEECT------------------TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEE
T ss_pred ccEEEEEEEC------------------CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEe
Confidence 4578999866 3799999999998 9999977776 68999999999887755
Q ss_pred CCCccccCCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 128 LPSITRENGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 128 lP~~~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
.+ +....++|-|.|... .|.....++-..+.|+.+|
T Consensus 72 ~~-----~~~~~~~F~I~t~~r-ty~l~A~se~e~~~Wi~aL 107 (264)
T 1qqg_A 72 RA-----DSKNKHLVALYTRDE-HFAIAADSEAEQDSWYQAL 107 (264)
T ss_dssp EC-----CSSCSSEEEEEESSC-EEEEECSSHHHHHHHHHHH
T ss_pred cc-----CCCCCcEEEEEECCE-EEEEEeCCHHHHHHHHHHH
Confidence 44 244568999998743 3444445556677787765
No 54
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=97.13 E-value=0.00017 Score=60.79 Aligned_cols=93 Identities=9% Similarity=0.119 Sum_probs=65.1
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhc----cCCCCccccCCc
Q 030783 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEV----ASLPSITRENGE 137 (171)
Q Consensus 62 lsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEv----g~lP~~~rEdge 137 (171)
-+|||+-+... -...|=.||.||.|.+++||--..|-.|.+++.|..+..+ ...|.-.... .
T Consensus 271 k~G~L~K~g~~-------------~~k~WKkRwFVL~~~~L~YYk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~-~ 336 (386)
T 3lju_X 271 KEGYMEKTGPK-------------QTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGH-H 336 (386)
T ss_dssp EEEEEEECCTT-------------SCSCCEEEEEEEETTEEEEESSTTCSBCSEEEECCCGGGTCEEEESCCTTCCSC-C
T ss_pred eeeeEEEECCC-------------CCCCCcccEEEEECCEEEEEecCCCcccceEEEeecceeeeeecccCCcccccc-C
Confidence 47999875421 1257999999999999999999999999999999887665 2233322111 1
Q ss_pred eEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 138 MQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 138 ~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
-.|+|-|.|.. =.|.....++-..+.|+.+|
T Consensus 337 ~~~~F~I~t~~-rty~l~A~s~~e~~~Wi~aL 367 (386)
T 3lju_X 337 WPHGITIVTPD-RKFLFACETESDQREWVAAF 367 (386)
T ss_dssp SCEEEEEECSS-CEEEEEESSHHHHHHHHHHH
T ss_pred CCcEEEEEeCC-eEEEEEcCCHHHHHHHHHHH
Confidence 25999999875 34444445555667787665
No 55
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=97.13 E-value=9.7e-05 Score=57.24 Aligned_cols=74 Identities=12% Similarity=0.166 Sum_probs=57.4
Q ss_pred cccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceEEEEEEEeecceeeeecccceeeeeeeee
Q 030783 88 DDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQYCFYILTRHGLRIECSSISKIQVLVILI 167 (171)
Q Consensus 88 DDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdswLs 167 (171)
..|-.||.||.|.+++||--..|-.|.+++-|+++..|-... ...++|-|.|.. =.|.....++-..+.|+.
T Consensus 77 k~WkkRwfvL~~~~L~Yyk~~~~~~~~g~I~L~~~~~v~~~~-------~k~~~F~I~t~~-r~~~l~A~s~~e~~~Wv~ 148 (228)
T 3tfm_A 77 RNWKKRWFVLRQSKLMYFENDSEEKLKGTVEVRSAKEIIDNT-------NKENGIDIIMAD-RTFHLIAESPEDASQWFS 148 (228)
T ss_dssp GGCEEEEEEECSSEEEEESSTTCCSEEEEEEGGGCSEEEEET-------TTTSEEEEECSS-CEEEEECSSHHHHHHHHH
T ss_pred CCceEEEEEEeCCEEEEEeCCCCcceeEEEEcCCCEEeccCC-------CCCcEEEEEcCC-cEEEEEcCCHHHHHHHHH
Confidence 789999999999999999988888999999999987654221 235899998854 445555566667778877
Q ss_pred ee
Q 030783 168 YL 169 (171)
Q Consensus 168 ~l 169 (171)
+|
T Consensus 149 aL 150 (228)
T 3tfm_A 149 VL 150 (228)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 56
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=96.96 E-value=0.00043 Score=49.90 Aligned_cols=48 Identities=25% Similarity=0.392 Sum_probs=39.6
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeC---CCCCCCcceeehh
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLST---DLSPQDSTVLSDV 122 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sT---DLsPqdStllsdI 122 (171)
-.+|||+-|++- +-.|=+||.||.+.|++||--.. |-.|.+++.|.+.
T Consensus 7 ~k~G~L~Kk~~~--------------~k~W~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L~~c 57 (120)
T 4a6h_A 7 IKSGFLERRSKF--------------LKSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSEC 57 (120)
T ss_dssp SEEEEEEEEETT--------------TTEEEEEEEEECSSEEEEESSCCTTTCCSCSEEEEGGGE
T ss_pred cEEEEEEEcCCC--------------CCCCccEEEEEeCCEEEEEcCCCcCcCCCceEEEECCCC
Confidence 357999999852 35799999999999999997653 8889999999764
No 57
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=96.96 E-value=0.00011 Score=52.91 Aligned_cols=81 Identities=16% Similarity=0.254 Sum_probs=56.9
Q ss_pred ccceeeEeeecceeEeEeeeCCC---CCCCcceeehhhhccCCCC---ccccCCceEEEEEEEeec-----ceeeeeccc
Q 030783 89 DWLPRFIVLHGSCIFFYLLSTDL---SPQDSTVLSDVVEVASLPS---ITRENGEMQYCFYILTRH-----GLRIECSSI 157 (171)
Q Consensus 89 DWlpRFVVl~G~cif~yL~sTDL---sPqdStllsdIVEvg~lP~---~~rEdge~~yaFyIlTrh-----GLR~ECSS~ 157 (171)
.|-.||+||.|..+|||-.-.|= .|-..+-|+.++.|.++.. ......+..+.|-|++.. +-.+.+...
T Consensus 19 ~Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~l~A~ 98 (117)
T 2rov_A 19 GWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLLLLAN 98 (117)
T ss_dssp CCCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEEEECS
T ss_pred CcEEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEEEEeC
Confidence 59999999999999999865543 6777787777777666544 333445567899998742 345666666
Q ss_pred ceeeeeeeeeee
Q 030783 158 SKIQVLVILIYL 169 (171)
Q Consensus 158 skiQVdswLs~l 169 (171)
|.-..+.|+.+|
T Consensus 99 s~~e~~~WV~aL 110 (117)
T 2rov_A 99 STEEQQKWVSRL 110 (117)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 666667777654
No 58
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=96.69 E-value=0.00018 Score=60.60 Aligned_cols=111 Identities=15% Similarity=0.155 Sum_probs=67.8
Q ss_pred HHHHHHHHHhhhhH-------HHHHhhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEee--ecceeEeEeeeCC
Q 030783 40 EDREAHLKAQLEHV-------DEILRSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVL--HGSCIFFYLLSTD 110 (171)
Q Consensus 40 eEREa~lkAqLehv-------DEvLRsarlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl--~G~cif~yL~sTD 110 (171)
.+||+-.+|.-+.- ..-..++--+|||+-|.+- +..|-.||.|| +|.|++||-..+|
T Consensus 119 ~~~e~fIr~KY~~~~f~~~~~~~~~~~~~keG~L~KrG~~--------------~k~WkrRwFVL~~~~~~L~Yy~~~~~ 184 (386)
T 3lju_X 119 LLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRD--------------NGQFLSRKFVLTEREGALKYFNRNDA 184 (386)
T ss_dssp HHHHHHHHHHHTSCTTTSGGGGHHHHSSEEEEEEEEECSS--------------SCCEEEEEEEEETTTTEEEEEC----
T ss_pred HHHHHEHHhhhCCCEEECCccCccccccccccceeeeccc--------------cCCceEEEEEEEcCCCEEEEECCCCc
Confidence 35666666654431 2334566779999999642 46899999999 9999999999999
Q ss_pred CCCCCcceeehhhhccCCCCccccCCceEEEEEEE---eecceeeeecccceeeeeeeeeee
Q 030783 111 LSPQDSTVLSDVVEVASLPSITRENGEMQYCFYIL---TRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 111 LsPqdStllsdIVEvg~lP~~~rEdge~~yaFyIl---TrhGLR~ECSS~skiQVdswLs~l 169 (171)
-.|.+.+.|+++..+-. | +.....++|-|. +..+-.|.-+..+...++.|+.+|
T Consensus 185 ~~p~g~I~L~~~~~~~~-~----~~~~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aI 241 (386)
T 3lju_X 185 KEPKAVMKIEHLNATFQ-P----AKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNAL 241 (386)
T ss_dssp -CCSEEEEGGGEEEEEC-H----HHHTSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHH
T ss_pred cCcccEEEeeccEEEEc-c----cccCCCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhh
Confidence 99999999999644331 1 111123445443 233344554555555666776554
No 59
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=95.79 E-value=0.0028 Score=52.83 Aligned_cols=94 Identities=14% Similarity=0.290 Sum_probs=57.2
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhh--ccCCCCcc-ccCCc
Q 030783 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVE--VASLPSIT-RENGE 137 (171)
Q Consensus 61 rlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVE--vg~lP~~~-rEdge 137 (171)
-+.||||.|.... .-|=.||+||+|+|+|||=..++=.|-|.+.+.++-. |=...+.+ .-.--
T Consensus 159 e~~G~L~~k~~~~--------------k~WkkRyfvLr~sgLyy~~K~~sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaP 224 (281)
T 4gmv_A 159 EIEGVLWLKDDGK--------------KSWKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAP 224 (281)
T ss_dssp CCEEEEEEECTTS--------------SCEEEEEEEECSSCEEEC---------CCEEEECGGGCEEEEESSHHHHTCCS
T ss_pred ccEEEEEEECCCC--------------CCCeEEEEEEeCCEEEEEeCCCCCccccceEEEEcCCcEEEEecccccccCCC
Confidence 3799999996422 3799999999999999999988766766665544432 11111222 23345
Q ss_pred eEEEEEEE------eecceeeeecccceeeeeeeeeee
Q 030783 138 MQYCFYIL------TRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 138 ~~yaFyIl------TrhGLR~ECSS~skiQVdswLs~l 169 (171)
+.|||=|- +.+++.|-|...-.- -++|+++|
T Consensus 225 t~~~F~ik~~~~~~~~~~~~~~caede~~-~~~Wv~Ai 261 (281)
T 4gmv_A 225 TDYCLVLKHPQIQKKSQYIKYLCCDDVRT-LHQWVNGI 261 (281)
T ss_dssp CSCEEEEECTTCCSCCTTCEEEECSSHHH-HHHHHHHH
T ss_pred CCcEEEEecCccCCCCCceEEEEeCCHHH-HHHHHHHH
Confidence 68899887 357889999876543 45677765
No 60
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=95.13 E-value=0.013 Score=48.15 Aligned_cols=95 Identities=15% Similarity=0.275 Sum_probs=57.3
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCC--CC-ccccCC
Q 030783 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASL--PS-ITRENG 136 (171)
Q Consensus 60 arlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~l--P~-~~rEdg 136 (171)
..+.||||.|.. + -.-|=-||+||+++|+|||=..++=.|-+-..+.++-+...- .+ -+.-.-
T Consensus 132 P~~~G~L~~ke~-------~-------~K~WkkRyfvLr~sgLy~~~k~~sk~~r~l~~~~~L~~~~vy~~~~~kKk~ka 197 (256)
T 3hk0_A 132 PEIQGFLHVKEL-------G-------KKSWKKLYVCLRRSGLYCSTKGTSAAPRHLQLLADLEDSNIFSLIAGRKQYNA 197 (256)
T ss_dssp EEEEEEEEEECT-------T-------SSCEEEEEEEEETTEEEEESSTTCCCGGGEEEEECCTTEEEEEESSTHHHHCC
T ss_pred CcceeEEEEecC-------C-------CCcceEEEEEEeCCEEEEEecCCCCccccceEEEEcCCCEEEEecccccccCC
Confidence 346799999832 2 168999999999999998887775444443333333222210 01 111223
Q ss_pred ceEEEEEEE------eecceeeeecccceeeeeeeeeee
Q 030783 137 EMQYCFYIL------TRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 137 e~~yaFyIl------TrhGLR~ECSS~skiQVdswLs~l 169 (171)
-+.|+|=|- +.|.+.|-|...... .++|.++|
T Consensus 198 Pt~~~F~ik~~k~~~~~~~~~~lcaede~~-~~~W~~aI 235 (256)
T 3hk0_A 198 PTDHGLCIKPNKVRNETKELRLLCAEDEQT-RTSWMTAF 235 (256)
T ss_dssp SSSEEEEEEETTCSSCCTTCEEEEESSHHH-HHHHHHHH
T ss_pred CCCCEEEEEcccccCCCceEEEEEeCCHHH-HHHHHHHH
Confidence 357899887 335577777665433 35676665
No 61
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=94.72 E-value=0.0057 Score=50.93 Aligned_cols=102 Identities=14% Similarity=0.265 Sum_probs=67.6
Q ss_pred hhcceeEEEeeecccCCCC-CCCCCCCCccccceeeEeeecceeEeEeeeC------CCCCCCcceeehhhhccCCCCcc
Q 030783 60 ARLSGYLYIRTRWKPLPGE-PPPIDDTDVDDWLPRFIVLHGSCIFFYLLST------DLSPQDSTVLSDVVEVASLPSIT 132 (171)
Q Consensus 60 arlsgYLyiRtRW~aLpgE-pppiDDtdVDDWlpRFVVl~G~cif~yL~sT------DLsPqdStllsdIVEvg~lP~~~ 132 (171)
..-.|||+-++-|..-.+- +-+ .-.--|=.||+||+|.+++||---. +..|..++.|..-+-. ..
T Consensus 11 v~k~G~L~rK~~l~~~k~~K~~~---~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~-~a---- 82 (279)
T 3a8n_A 11 VRKAGALAVKNFLVHKKNKKVES---ATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQ-AV---- 82 (279)
T ss_dssp CSCEEEEEEEEEEEEETTTEEEC---CCCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEEC-CC----
T ss_pred eeEEEEEEEEEEecccCCcccCC---ccCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEE-ec----
Confidence 3567999988777543221 100 1245799999999999999997443 3457777766543322 11
Q ss_pred ccCCceEEEEEEEeecceeeeecccceeeeeeeeeee
Q 030783 133 RENGEMQYCFYILTRHGLRIECSSISKIQVLVILIYL 169 (171)
Q Consensus 133 rEdge~~yaFyIlTrhGLR~ECSS~skiQVdswLs~l 169 (171)
.++.+-.++|.|.|..|=.|-=...+.-.+.+|+.+|
T Consensus 83 ~d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI 119 (279)
T 3a8n_A 83 PEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAI 119 (279)
T ss_dssp TTSSSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHH
T ss_pred cccCCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHH
Confidence 2444446899999999987776666777778888765
No 62
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=94.64 E-value=0.0084 Score=45.89 Aligned_cols=77 Identities=9% Similarity=0.095 Sum_probs=52.8
Q ss_pred ccc-cceeeEeeecceeEeEeeeCCCCCCCcceeehh--hhccCCCCccccCCceEEEEEEEeecc-------eeeeecc
Q 030783 87 VDD-WLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDV--VEVASLPSITRENGEMQYCFYILTRHG-------LRIECSS 156 (171)
Q Consensus 87 VDD-WlpRFVVl~G~cif~yL~sTDLsPqdStllsdI--VEvg~lP~~~rEdge~~yaFyIlTrhG-------LR~ECSS 156 (171)
|-- |=.||.||.+.|+|||=-.+|=.|++++-|..+ .||. |++. .-.|+|=+.+--| =.|+=|.
T Consensus 26 ~k~~wk~rWFVLt~~~L~yyKd~~eke~~G~IpL~~~~vr~v~--~~~~----~rk~~F~l~~~d~r~v~~~h~~y~LsA 99 (125)
T 1dyn_A 26 MKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVE--KGFM----SSKHIFALFNTEQRNVYKDYRQLELAC 99 (125)
T ss_dssp GGTSSEEEEEEEESSEEEEESSTTCSCEEEEEECTTEEEEECC--SCSS----SSCEEEEEEETTSSCSSTTCSSEEEEE
T ss_pred ccCCceeeEEEEeccceeeecCCcccccceEEECCCceEeccC--CCCC----CCceEEEEECCCCccccccceEEEEeC
Confidence 554 899999999999999999999999999988654 3443 2222 2368888876322 1344444
Q ss_pred cceeeeeeeeeee
Q 030783 157 ISKIQVLVILIYL 169 (171)
Q Consensus 157 ~skiQVdswLs~l 169 (171)
.+.-.+++|..+|
T Consensus 100 ~t~ee~~~Wi~s~ 112 (125)
T 1dyn_A 100 ETQEEVDSWKASF 112 (125)
T ss_dssp SSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 4455567776654
No 63
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=87.81 E-value=0.17 Score=40.79 Aligned_cols=73 Identities=18% Similarity=0.232 Sum_probs=41.5
Q ss_pred ceeEEEeeecccCCCCCCCCCCCCccccceeeEeee-cceeEeEeeeCCCCCCCcceeehhhhccCCCCccccCCceEEE
Q 030783 63 SGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLH-GSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQYC 141 (171)
Q Consensus 63 sgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~-G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~rEdge~~ya 141 (171)
+|||.-++ +- +.-|=+||.||+ +.+++||=--+|-.|.+.+-+..+-.++..+ ...++.-.++
T Consensus 9 eG~L~K~g-------~~-------~k~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~--~~~~~~~~~~ 72 (446)
T 4ejn_A 9 EGWLHKRG-------EY-------IKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQL--MKTERPRPNT 72 (446)
T ss_dssp EEEEEEEE-------TT-------TTEEEEEEEEEETTSBEEEESSCC-------CCCGGGBCTTCEE--EEECSSSTTE
T ss_pred EeeEEeec-------cc-------cccccceEEEEeeCCEEEEEecCCCCCccCcccccCccccceee--cCCCCCCCce
Confidence 68998773 22 356999999997 8999999877777777777776643332111 1122222457
Q ss_pred EEEEeeccee
Q 030783 142 FYILTRHGLR 151 (171)
Q Consensus 142 FyIlTrhGLR 151 (171)
|-|.+..+-+
T Consensus 73 f~I~~~~~~~ 82 (446)
T 4ejn_A 73 FIIRCLQWTT 82 (446)
T ss_dssp EEEEEEETTE
T ss_pred eEEEcCCCce
Confidence 8887554433
No 64
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.70 E-value=0.41 Score=36.95 Aligned_cols=76 Identities=14% Similarity=0.348 Sum_probs=53.2
Q ss_pred ccccceeeEeeecceeEeEeeeCCC--CCCCcceeehhhhccCCCCccccCCceEEEEEEEe--ecce---eeeecccce
Q 030783 87 VDDWLPRFIVLHGSCIFFYLLSTDL--SPQDSTVLSDVVEVASLPSITRENGEMQYCFYILT--RHGL---RIECSSISK 159 (171)
Q Consensus 87 VDDWlpRFVVl~G~cif~yL~sTDL--sPqdStllsdIVEvg~lP~~~rEdge~~yaFyIlT--rhGL---R~ECSS~sk 159 (171)
..-|=.||+|+.|..+|||=.-.|- .|-+.+.|.. .||-+-+|. ....|+|-++. -+|. -+.|. ++
T Consensus 25 lK~~KrrWFvlk~~~L~YyK~kee~~~ePig~I~L~g-ceV~pd~~~----~~~kf~ikl~iPs~~g~r~y~l~cd--sE 97 (137)
T 2ys3_A 25 LKGYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNLKG-CEVVPDVNV----SGQKFCIKLLVPSPEGMSEIYLRCQ--DE 97 (137)
T ss_dssp SSSSCCCEEEECSSCEEEESSTTTTTSCCSCCBCTTT-CEEEECCBG----GGTBEEEEEEEECSSSEEEEEEEES--SH
T ss_pred cccceeEEEEEeCCEEEEECCchhccCCCceEEECCC-CEEeccccc----cCCceEEEEEccCCCCceEEEEECC--CH
Confidence 4468899999999999888655555 6888888877 556555555 23467765553 4564 46676 46
Q ss_pred eeeeeeeeee
Q 030783 160 IQVLVILIYL 169 (171)
Q Consensus 160 iQVdswLs~l 169 (171)
.|.+.|+.|+
T Consensus 98 eqy~~WMaA~ 107 (137)
T 2ys3_A 98 QQYARWMAGC 107 (137)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7888887764
No 65
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=80.50 E-value=1.1 Score=29.45 Aligned_cols=32 Identities=25% Similarity=0.447 Sum_probs=19.4
Q ss_pred chhheeHHHHHhHHhhhcChHHHHHHHHHhhh
Q 030783 20 EKVELTATELESLRSELADLEDREAHLKAQLE 51 (171)
Q Consensus 20 ekvelt~~EvesLR~Ela~~eEREa~lkAqLe 51 (171)
.-||...+|++.||.++..+.++-+.++++|+
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555566666666666666666666666665
No 66
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=77.72 E-value=1.2 Score=33.11 Aligned_cols=34 Identities=32% Similarity=0.461 Sum_probs=29.0
Q ss_pred cchhheeHHHHHhHHhhhcChHHHHHHHHHhhhh
Q 030783 19 QEKVELTATELESLRSELADLEDREAHLKAQLEH 52 (171)
Q Consensus 19 qekvelt~~EvesLR~Ela~~eEREa~lkAqLeh 52 (171)
.|.+.-...|+++|+.|-..+.+|-+.|.++|||
T Consensus 11 ~e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~ 44 (100)
T 1go4_E 11 REEADTLRLKVEELEGERSRLEEEKRMLEAQLER 44 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777888888888888899999999999987
No 67
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=76.25 E-value=1.4 Score=28.95 Aligned_cols=30 Identities=23% Similarity=0.409 Sum_probs=27.0
Q ss_pred eHHHHHhHHhhhcChHHHHHHHHHhhhhHH
Q 030783 25 TATELESLRSELADLEDREAHLKAQLEHVD 54 (171)
Q Consensus 25 t~~EvesLR~Ela~~eEREa~lkAqLehvD 54 (171)
+.+|+|.||.|++++..|-+.|+++++..-
T Consensus 17 ~~~d~eaLk~E~~eLk~k~~~L~~~~~el~ 46 (53)
T 2yy0_A 17 ENPEIELLRLELAEMKEKYEAIVEENKKLK 46 (53)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999987654
No 68
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=72.34 E-value=4.8 Score=30.77 Aligned_cols=60 Identities=22% Similarity=0.277 Sum_probs=49.2
Q ss_pred ccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccc-cCCceEEEEEEEeec
Q 030783 89 DWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITR-ENGEMQYCFYILTRH 148 (171)
Q Consensus 89 DWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~r-Edge~~yaFyIlTrh 148 (171)
.|-.+|-+|.+-||-+|--.++=.|=-.+-|+||.-|-.-.++.- ..+-.-+||=|.|.+
T Consensus 23 ~rKRHYWrLD~K~Itlf~~e~~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T~~ 83 (125)
T 2coa_A 23 LRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTAN 83 (125)
T ss_dssp CCEEEEEEECSSEEEEESSSSCSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEECSS
T ss_pred cccceeeEecCCeEEEEecCCCCceeeeeehhHeecccccccccccCCCCCCceEEEEeCC
Confidence 588999999999999999999989999999999988877665553 233345899999864
No 69
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=68.52 E-value=3.2 Score=30.21 Aligned_cols=42 Identities=24% Similarity=0.356 Sum_probs=28.3
Q ss_pred HHHHhHHhhhcChHHHHHHHHHhhhhHHHHHhhhh----cceeEEE
Q 030783 27 TELESLRSELADLEDREAHLKAQLEHVDEILRSAR----LSGYLYI 68 (171)
Q Consensus 27 ~EvesLR~Ela~~eEREa~lkAqLehvDEvLRsar----lsgYLyi 68 (171)
+.+..|+.|+++++++|+.|-.++..+.+-||... -..|.|.
T Consensus 6 ~~~~~Lk~El~~L~~~E~~LD~~i~~~~~~l~~lted~~n~~~aYV 51 (106)
T 2aze_B 6 GRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSEDTDSQRLAYV 51 (106)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccee
Confidence 45677888888888888888777776666665433 2345555
No 70
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=68.22 E-value=5.7 Score=30.40 Aligned_cols=31 Identities=19% Similarity=0.599 Sum_probs=24.1
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEe
Q 030783 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYL 106 (171)
Q Consensus 62 lsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL 106 (171)
.-|||+.|. .=+.-|-.||+||...++.||=
T Consensus 23 ~~g~l~~~~--------------~~~~~w~~rw~vl~~~~~~~~~ 53 (228)
T 3tfm_A 23 FHSFLYMNG--------------GLMNSWKRRWCVLKDETFLWFR 53 (228)
T ss_dssp EEEEEEECC--------------TTTCCCEEEEEEEETTEEEEES
T ss_pred eEEEEeecC--------------cccccceEEEEEEeCCEEEEec
Confidence 458999882 2356699999999988888775
No 71
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=64.88 E-value=6.2 Score=30.58 Aligned_cols=33 Identities=30% Similarity=0.793 Sum_probs=26.5
Q ss_pred ceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecceeEeEeeeC
Q 030783 63 SGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLST 109 (171)
Q Consensus 63 sgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~cif~yL~sT 109 (171)
.|+||.+. |+ ...|-+||.||.|.=+||+...+
T Consensus 4 ~G~L~~~~----------~~----~~~w~~~~fvL~~~~L~y~~e~s 36 (150)
T 2fjl_A 4 NGILYLED----------PV----NHEWYPHYFVLTSSKIYYSEETS 36 (150)
T ss_dssp EEEEEEEE----------TT----TTEEEEEEEEEETTEEEECCCCS
T ss_pred ceEEEeec----------CC----CCCceEeEEEEECCEEEEEeecc
Confidence 48999986 33 35799999999999999987433
No 72
>2fcw_A Alpha-2-macroglobulin receptor-associated protein; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: a.13.1.1 PDB: 2ftu_A
Probab=60.26 E-value=8.4 Score=29.14 Aligned_cols=35 Identities=43% Similarity=0.574 Sum_probs=27.6
Q ss_pred heeHHHHHhHHhhhcChHHHH---HHHHHhhhhHHHHH
Q 030783 23 ELTATELESLRSELADLEDRE---AHLKAQLEHVDEIL 57 (171)
Q Consensus 23 elt~~EvesLR~Ela~~eERE---a~lkAqLehvDEvL 57 (171)
.+|..|++|+|.||---|-|- .++++||+-.++-+
T Consensus 20 NFT~~ELeSlK~EL~HfE~rl~K~rH~~~el~l~~~k~ 57 (109)
T 2fcw_A 20 NLTDKELEAFREELKHFEAKIEKHNHYQKQLEIAHEKL 57 (109)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999998888664 56778887665543
No 73
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=59.82 E-value=6.3 Score=33.67 Aligned_cols=40 Identities=18% Similarity=0.375 Sum_probs=30.3
Q ss_pred chhheeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHhh
Q 030783 20 EKVELTATELESLRSELADLEDREAHLKAQLEHVDEILRS 59 (171)
Q Consensus 20 ekvelt~~EvesLR~Ela~~eEREa~lkAqLehvDEvLRs 59 (171)
-|++....|+++|+.+.+.+++.-+.++++++.+.+.|+.
T Consensus 3 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 42 (403)
T 4etp_A 3 SKIAALKEKIAALKEKIAALKEKIKDTELGMKELNEILIK 42 (403)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3667777888888888888888888888888888777665
No 74
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=57.10 E-value=8.8 Score=26.38 Aligned_cols=44 Identities=27% Similarity=0.426 Sum_probs=32.0
Q ss_pred chhheeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHhhhhccee
Q 030783 20 EKVELTATELESLRSELADLEDREAHLKAQLEHVDEILRSARLSGY 65 (171)
Q Consensus 20 ekvelt~~EvesLR~Ela~~eEREa~lkAqLehvDEvLRsarlsgY 65 (171)
+.++-..++++.++.++.+++++.+.++.+++.+.+-++ .+++|
T Consensus 64 ~~i~~~~~~l~~l~~~i~~l~~~i~~l~~~~~~l~~~~~--~~~~~ 107 (112)
T 1l8d_A 64 ELLSKYHLDLNNSKNTLAKLIDRKSELERELRRIDMEIK--RLTPL 107 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHh
Confidence 345556678888888888888888888888888877776 66655
No 75
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=55.07 E-value=10 Score=23.62 Aligned_cols=32 Identities=28% Similarity=0.426 Sum_probs=22.0
Q ss_pred chhheeHHHHHhHHhhhcChHHHHHHHHHhhh
Q 030783 20 EKVELTATELESLRSELADLEDREAHLKAQLE 51 (171)
Q Consensus 20 ekvelt~~EvesLR~Ela~~eEREa~lkAqLe 51 (171)
.+...+...++.|..+++.+|+.-+.|.++|.
T Consensus 37 ~~~~~~~~~~~~L~~ri~~Le~~l~~l~~~l~ 68 (70)
T 1zme_C 37 KKIVVSTKYLQQLQKDLNDKTEENNRLKALLL 68 (70)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455666778887777777777777766654
No 76
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=53.51 E-value=3.3 Score=30.05 Aligned_cols=31 Identities=19% Similarity=0.539 Sum_probs=24.3
Q ss_pred eHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHhh
Q 030783 25 TATELESLRSELADLEDREAHLKAQLEHVDEILRS 59 (171)
Q Consensus 25 t~~EvesLR~Ela~~eEREa~lkAqLehvDEvLRs 59 (171)
-+.|||-||..|++++||-++|+.. ..+||+
T Consensus 13 VREEVevLKe~I~EL~e~~~qLE~E----N~~Lk~ 43 (78)
T 1dip_A 13 VREEVEILKEQIRELVEKNSQLERE----NTLLKT 43 (78)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHH----HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHH
Confidence 3579999999999999998776543 456664
No 77
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.19 E-value=16 Score=28.05 Aligned_cols=60 Identities=18% Similarity=0.309 Sum_probs=47.3
Q ss_pred ccceeeEeeecceeEeEeeeCCCCCCCcceeehhhhccCCCCccc-cCCceEEEEEEEeec
Q 030783 89 DWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITR-ENGEMQYCFYILTRH 148 (171)
Q Consensus 89 DWlpRFVVl~G~cif~yL~sTDLsPqdStllsdIVEvg~lP~~~r-Edge~~yaFyIlTrh 148 (171)
.|-.+|-+|.+.||-+|---++=.|=--+-|+||.-|-.-.++.- ..+..-+||=|.|.+
T Consensus 23 ~rKRHYWrLD~K~Itlf~~e~~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T~~ 83 (129)
T 2d9z_A 23 LRKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITDT 83 (129)
T ss_dssp CCEEEEEEEESSCEEEESCSSCCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEECSS
T ss_pred cccceeeEecCCeEEEEecCCCCceeceeeHHHhcccccccCccccCCCCCCceEEEEECC
Confidence 499999999999999999888888888899999987776655543 233334889998864
No 78
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=53.08 E-value=7.7 Score=28.10 Aligned_cols=26 Identities=27% Similarity=0.399 Sum_probs=16.8
Q ss_pred HHHhHHhhhcChHHHHHHHHHhhhhH
Q 030783 28 ELESLRSELADLEDREAHLKAQLEHV 53 (171)
Q Consensus 28 EvesLR~Ela~~eEREa~lkAqLehv 53 (171)
|.++|+++++.+++..++|.+++...
T Consensus 2 ~~~~L~~~i~~L~~q~~~L~~ei~~~ 27 (85)
T 3viq_B 2 EKSQLESRVHLLEQQKEQLESSLQDA 27 (85)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34666677777777766666666554
No 79
>2rjz_A PILO protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Pseudomonas aeruginosa}
Probab=49.62 E-value=6.6 Score=29.26 Aligned_cols=48 Identities=23% Similarity=0.355 Sum_probs=38.4
Q ss_pred eHHHHHhHHhhhcChHHHHHHHHHhh---hhHHHHHh----hhhcceeEEEeeec
Q 030783 25 TATELESLRSELADLEDREAHLKAQL---EHVDEILR----SARLSGYLYIRTRW 72 (171)
Q Consensus 25 t~~EvesLR~Ela~~eEREa~lkAqL---ehvDEvLR----sarlsgYLyiRtRW 72 (171)
-|+.++.||.+++.++++-+.+..|| +.++.+|. .|+=+|=-...=+|
T Consensus 13 ~aa~L~~l~~ql~~l~~~l~~l~~~LP~~~em~~LL~~i~~~~~~~GL~l~~~~p 67 (147)
T 2rjz_A 13 QAANLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKL 67 (147)
T ss_dssp GCSSHHHHHHHHHHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHhCCCEEEEeee
Confidence 36789999999999999999999999 55555554 67888877776664
No 80
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=47.93 E-value=9.7 Score=27.00 Aligned_cols=89 Identities=13% Similarity=0.295 Sum_probs=43.8
Q ss_pred HHHHhHHhhhcCh---HHHHHHHHHhhhhHHHHHhhh--------------hcceeEEEee--ecc-------cCCCCCC
Q 030783 27 TELESLRSELADL---EDREAHLKAQLEHVDEILRSA--------------RLSGYLYIRT--RWK-------PLPGEPP 80 (171)
Q Consensus 27 ~EvesLR~Ela~~---eEREa~lkAqLehvDEvLRsa--------------rlsgYLyiRt--RW~-------aLpgEpp 80 (171)
+|++.|+.++..+ ..+-.+|+.+|+++...|+.- +=++|.+... .|. ..-|.-.
T Consensus 6 ~~~~~l~~~~~~~~~l~~~~~~l~~~l~~~~~~l~~~~~~~~~Cp~gw~~~~~~CY~~~~~~~tw~~A~~~C~~~g~~La 85 (182)
T 3kqg_A 6 AQIPELKSDLEKASALNTKIRALQGSLENMSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLT 85 (182)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEETTEEEEECSSCBCHHHHHHHHHHTTCEEC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCEEeCCEEEEEECCCCCHHHHHHHHHhCCCEEe
Confidence 4455555444433 445556666666666665421 1234444322 232 3556666
Q ss_pred CCCCCCccccceeeEeeecceeEeEeeeCCCCCCCccee
Q 030783 81 PIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVL 119 (171)
Q Consensus 81 piDDtdVDDWlpRFVVl~G~cif~yL~sTDLsPqdStll 119 (171)
.|++.+-.++|-.++ .+ ..|++-.+|....++-.-
T Consensus 86 ~i~s~~e~~~l~~~~--~~--~~~WIGl~~~~~~~~w~W 120 (182)
T 3kqg_A 86 SVTSESEQEFLYKTA--GG--LIYWIGLTKAGMEGDWSW 120 (182)
T ss_dssp CCCSHHHHHHHHHHH--TT--CCEEEEEEECSTTCCEEE
T ss_pred eeCCHHHHHHHHHhc--CC--CcEEEEeEccCCCCceEe
Confidence 788877777776654 33 256666666655444333
No 81
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=44.06 E-value=19 Score=26.08 Aligned_cols=46 Identities=22% Similarity=0.374 Sum_probs=34.4
Q ss_pred cchhheeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHhhhhcce
Q 030783 19 QEKVELTATELESLRSELADLEDREAHLKAQLEHVDEILRSARLSG 64 (171)
Q Consensus 19 qekvelt~~EvesLR~Ela~~eEREa~lkAqLehvDEvLRsarlsg 64 (171)
+|++.-+.+...++-++|.++|.|-..|.+++++.++-++--|-.|
T Consensus 30 ~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eelq~~~ 75 (81)
T 1wt6_A 30 SREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQAEG 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 3444555666777778999999999999999999998887755444
No 82
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=43.19 E-value=16 Score=29.26 Aligned_cols=66 Identities=23% Similarity=0.269 Sum_probs=41.2
Q ss_pred eHHHHHhHHhhhcChHHHHH---HHHHhhhhHHHHHhhhhc-ceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecc
Q 030783 25 TATELESLRSELADLEDREA---HLKAQLEHVDEILRSARL-SGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGS 100 (171)
Q Consensus 25 t~~EvesLR~Ela~~eEREa---~lkAqLehvDEvLRsarl-sgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ 100 (171)
+.+|-+.||.|++.++++.+ +++++.+.+.++|....- +.|=++-.|=.+-. -+.|--.+++=.|+
T Consensus 24 l~~eN~~Lk~e~~~l~~~~~~~~~l~~En~rLr~lL~~~~~~~~~~~i~A~VI~~~----------~~~~~~~i~IdkGs 93 (255)
T 2j5u_A 24 TYTENQHLKERLEELAQLESEVADLKKENKDLKESLDITDSIRDYDPLNASVISRN----------PTNWNDQVEIDKGS 93 (255)
T ss_dssp --CTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTCEEEEEEEEEECC----------GGGTTTEEEESCCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCceEEEEEEEEC----------CCCcceEEEEeCCc
Confidence 34677777777777776554 445566777888887764 78877766544432 34576666654443
No 83
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=41.38 E-value=14 Score=23.77 Aligned_cols=32 Identities=16% Similarity=0.270 Sum_probs=17.2
Q ss_pred eHHHHHhHHhhhcChHHHHHHHHHhhhhHHHH
Q 030783 25 TATELESLRSELADLEDREAHLKAQLEHVDEI 56 (171)
Q Consensus 25 t~~EvesLR~Ela~~eEREa~lkAqLehvDEv 56 (171)
+..+++.|.++-..+...-+.|..++..+-.+
T Consensus 27 Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~ 58 (61)
T 1t2k_D 27 LEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQL 58 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555554443
No 84
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=41.19 E-value=14 Score=23.00 Aligned_cols=25 Identities=44% Similarity=0.563 Sum_probs=16.6
Q ss_pred HHHhHHhhhcChHHHHHHH---HHhhhh
Q 030783 28 ELESLRSELADLEDREAHL---KAQLEH 52 (171)
Q Consensus 28 EvesLR~Ela~~eEREa~l---kAqLeh 52 (171)
||..|..|.|.+|...-|| -|||||
T Consensus 2 evaqlekevaqaeaenyqleqevaqleh 29 (33)
T 1fmh_A 2 EVAQLEKEVAQAEAENYQLEQEVAQLEH 29 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 5667777888777655444 367776
No 85
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=41.07 E-value=16 Score=27.28 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=25.2
Q ss_pred hhheeHHHHHhHHhhhc-----------ChHHHHHHHHHhhhhH
Q 030783 21 KVELTATELESLRSELA-----------DLEDREAHLKAQLEHV 53 (171)
Q Consensus 21 kvelt~~EvesLR~Ela-----------~~eEREa~lkAqLehv 53 (171)
-|+-+..||+.||.|+. +++.|-++|+|+|++-
T Consensus 16 ~Ie~Lkreie~lk~ele~l~~E~q~~v~ql~~~i~~Le~eL~e~ 59 (120)
T 3i00_A 16 LIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQ 59 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67778888888888764 5667778888888774
No 86
>2it9_A Hypothetical protein; structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; HET: MSE PGE; 1.80A {Prochlorococcus marinus} SCOP: d.18.1.3
Probab=40.70 E-value=9.4 Score=29.42 Aligned_cols=63 Identities=25% Similarity=0.309 Sum_probs=48.8
Q ss_pred hhheeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHhhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEee
Q 030783 21 KVELTATELESLRSELADLEDREAHLKAQLEHVDEILRSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVL 97 (171)
Q Consensus 21 kvelt~~EvesLR~Ela~~eEREa~lkAqLehvDEvLRsarlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl 97 (171)
-||||++|...+..=+..+.+--++++.|| .-.-++++=+-.--=|..+.|.| ..|=.|||..
T Consensus 31 AiELTe~E~~~f~~Ll~qL~~~~~~i~~eL------M~EE~I~lE~E~~~~W~eleG~~--------~~~sLr~IL~ 93 (127)
T 2it9_A 31 AIELDKSEWKILVEVVMELCDQYKLVKEQL------MGDEDITLELERRPWLAILNGDQ--------YGWNLRLILS 93 (127)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHHHTTTC------CTTCEEEEEEEETTEEEEEEEET--------TEEEEEEEEC
T ss_pred eeeecHHHHHHHHHHHHHHHHHHHHHHHHh------cchhheeeeecCccEEEEeeccc--------CeeEEEEEEe
Confidence 589999999999998888877777776655 34455666666666688888888 7899999876
No 87
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=39.82 E-value=26 Score=23.97 Aligned_cols=38 Identities=16% Similarity=0.270 Sum_probs=30.0
Q ss_pred heeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHhhh
Q 030783 23 ELTATELESLRSELADLEDREAHLKAQLEHVDEILRSA 60 (171)
Q Consensus 23 elt~~EvesLR~Ela~~eEREa~lkAqLehvDEvLRsa 60 (171)
+-...+.+.++.+|..+.++.+.++.+++.+...+.-.
T Consensus 6 ~~~~~~~~~~~~~l~~L~~~~~~l~~~i~~l~~~l~~l 43 (112)
T 1l8d_A 6 EELETKKTTIEEERNEITQRIGELKNKIGDLKTAIEEL 43 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33445778888888888888889999998888887654
No 88
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=39.32 E-value=27 Score=23.85 Aligned_cols=31 Identities=35% Similarity=0.463 Sum_probs=22.8
Q ss_pred hhhee---HHHHHhHHhhhcChHHHHHHHHHhhh
Q 030783 21 KVELT---ATELESLRSELADLEDREAHLKAQLE 51 (171)
Q Consensus 21 kvelt---~~EvesLR~Ela~~eEREa~lkAqLe 51 (171)
+..|+ ..|++.|-.+|+.+|.+-+.|.++|.
T Consensus 13 ~~KLSykeqrEle~le~~Ie~LE~~i~~le~~la 46 (89)
T 2lw1_A 13 SSKLSYKLQRELEQLPQLLEDLEAKLEALQTQVA 46 (89)
T ss_dssp SCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555 46788888888888888888887774
No 89
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=38.44 E-value=26 Score=23.19 Aligned_cols=30 Identities=40% Similarity=0.552 Sum_probs=25.4
Q ss_pred heeHHHHHhHHhhhcChHHHHHHHHHhhhh
Q 030783 23 ELTATELESLRSELADLEDREAHLKAQLEH 52 (171)
Q Consensus 23 elt~~EvesLR~Ela~~eEREa~lkAqLeh 52 (171)
-.+..|+..|.+|+..+|.+-+.||..|..
T Consensus 16 gfspeelaaleselqalekklaalksklqa 45 (48)
T 1g6u_A 16 GFSPEELAALESELQALEKKLAALKSKLQA 45 (48)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788999999999999999999988764
No 90
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=38.18 E-value=29 Score=22.78 Aligned_cols=37 Identities=16% Similarity=0.320 Sum_probs=25.4
Q ss_pred hheeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHh
Q 030783 22 VELTATELESLRSELADLEDREAHLKAQLEHVDEILR 58 (171)
Q Consensus 22 velt~~EvesLR~Ela~~eEREa~lkAqLehvDEvLR 58 (171)
.+-+..+++.|..+-+.++.+-+.|+.++..+-++|+
T Consensus 25 ~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll~ 61 (63)
T 1ci6_A 25 QEALTGECKELEKKNEALKERADSLAKEIQYLKDLIE 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4445567777777777777777777777766666554
No 91
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=37.63 E-value=17 Score=24.38 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=10.9
Q ss_pred HHHhHHhhhcChHHHHHHHHHhh
Q 030783 28 ELESLRSELADLEDREAHLKAQL 50 (171)
Q Consensus 28 EvesLR~Ela~~eEREa~lkAqL 50 (171)
+++.|..|+..+.++-..|++||
T Consensus 55 ~~~~l~~e~~~L~~~~~~L~~~l 77 (83)
T 1nkp_B 55 KNHTHQQDIDDLKRQNALLEQQV 77 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444445555554
No 92
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=37.55 E-value=29 Score=22.58 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=26.1
Q ss_pred hhheeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHh
Q 030783 21 KVELTATELESLRSELADLEDREAHLKAQLEHVDEILR 58 (171)
Q Consensus 21 kvelt~~EvesLR~Ela~~eEREa~lkAqLehvDEvLR 58 (171)
.++-+..+|+.|..+-+.+...-+.|..++.++-.+|.
T Consensus 24 ~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l~ 61 (63)
T 2wt7_A 24 LTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILA 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445567777777777777777777777777776664
No 93
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=36.55 E-value=25 Score=24.91 Aligned_cols=27 Identities=37% Similarity=0.501 Sum_probs=19.6
Q ss_pred HHHHhHHhhhcChHHHHHHHHHhhhhH
Q 030783 27 TELESLRSELADLEDREAHLKAQLEHV 53 (171)
Q Consensus 27 ~EvesLR~Ela~~eEREa~lkAqLehv 53 (171)
.|++.|..+|.+++.-|+.|.++|+.+
T Consensus 4 ~~~~~l~~eL~~l~~eE~~L~~eL~~l 30 (96)
T 3q8t_A 4 SDSEQLQRELKELALEEERLIQELEDV 30 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777777777777777777777664
No 94
>3he4_B Synzip5; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=36.33 E-value=22 Score=23.37 Aligned_cols=25 Identities=36% Similarity=0.623 Sum_probs=17.0
Q ss_pred HHhHHhhhcChHHHHHHHHHhhhhH
Q 030783 29 LESLRSELADLEDREAHLKAQLEHV 53 (171)
Q Consensus 29 vesLR~Ela~~eEREa~lkAqLehv 53 (171)
|..|..-|..+|||.|.||.--||+
T Consensus 5 vkelknyiqeleernaelknlkehl 29 (46)
T 3he4_B 5 VKELKNYIQELEERNAELKNLKEHL 29 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHhHHHHH
Confidence 3445666777899988877655554
No 95
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=34.34 E-value=39 Score=23.01 Aligned_cols=40 Identities=28% Similarity=0.405 Sum_probs=28.9
Q ss_pred hhheeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHhhh
Q 030783 21 KVELTATELESLRSELADLEDREAHLKAQLEHVDEILRSA 60 (171)
Q Consensus 21 kvelt~~EvesLR~Ela~~eEREa~lkAqLehvDEvLRsa 60 (171)
+||....|--+||.||.|---.-+.|...--++-|+|+-.
T Consensus 11 QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~l 50 (54)
T 1deb_A 11 QVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQL 50 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHH
Confidence 6788888989999999876655555555555667777654
No 96
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=33.46 E-value=18 Score=24.01 Aligned_cols=30 Identities=27% Similarity=0.314 Sum_probs=15.4
Q ss_pred hhheeHHHHHhHHhhhcChHHHHHHHHHhh
Q 030783 21 KVELTATELESLRSELADLEDREAHLKAQL 50 (171)
Q Consensus 21 kvelt~~EvesLR~Ela~~eEREa~lkAqL 50 (171)
.++-+..+|+.|.+|-+.+...-+.|+.+|
T Consensus 31 ~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 31 RMKQLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555666555555555555555544
No 97
>2p01_A Alpha-2-macroglobulin receptor-associated protein; RAP, cell adhesion; NMR {Homo sapiens} PDB: 2p03_A
Probab=33.13 E-value=35 Score=29.87 Aligned_cols=36 Identities=44% Similarity=0.601 Sum_probs=28.5
Q ss_pred heeHHHHHhHHhhhcChHHHH---HHHHHhhhhHHHHHh
Q 030783 23 ELTATELESLRSELADLEDRE---AHLKAQLEHVDEILR 58 (171)
Q Consensus 23 elt~~EvesLR~Ela~~eERE---a~lkAqLehvDEvLR 58 (171)
.+|..|++|+|.||---|-|- .|++|||+-.++-+.
T Consensus 234 NFT~~ELeSlK~EL~HfE~rL~KlrH~~~El~l~~~k~k 272 (323)
T 2p01_A 234 NLTDKELEAFREELKHFEAKIEKHNHYQKQLEIAHEKLR 272 (323)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999888764 577888886655553
No 98
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=32.86 E-value=21 Score=24.71 Aligned_cols=36 Identities=28% Similarity=0.197 Sum_probs=14.6
Q ss_pred HHhHHhhhcChHHHHHHHHHhhhhHHHHHhhhhcce
Q 030783 29 LESLRSELADLEDREAHLKAQLEHVDEILRSARLSG 64 (171)
Q Consensus 29 vesLR~Ela~~eEREa~lkAqLehvDEvLRsarlsg 64 (171)
++.|-..++.-...-..|++||..+-+-+++..-|+
T Consensus 30 IeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~~~~ 65 (78)
T 3efg_A 30 LTELSEALADARLTGARNAELIRHLLEDLGKVRSTL 65 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 344444444444444455556655555555555443
No 99
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=32.76 E-value=19 Score=26.32 Aligned_cols=36 Identities=8% Similarity=0.206 Sum_probs=14.6
Q ss_pred heeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHh
Q 030783 23 ELTATELESLRSELADLEDREAHLKAQLEHVDEILR 58 (171)
Q Consensus 23 elt~~EvesLR~Ela~~eEREa~lkAqLehvDEvLR 58 (171)
++.....+.|+.+|+.+++..+.|...+++.+++++
T Consensus 98 ~~l~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~~ 133 (148)
T 3gpv_A 98 KLMKQQEANVLQLIQDTEKNLKKIQQKIAKYEDEIS 133 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444444444444433
No 100
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=32.15 E-value=24 Score=24.39 Aligned_cols=16 Identities=31% Similarity=0.478 Sum_probs=3.7
Q ss_pred HHHHhHHhhhcChHHH
Q 030783 27 TELESLRSELADLEDR 42 (171)
Q Consensus 27 ~EvesLR~Ela~~eER 42 (171)
+|+++|++..+.+|.+
T Consensus 3 ~eie~L~~q~~~Le~~ 18 (86)
T 1x8y_A 3 CQLSQLQCQLAAKEAK 18 (86)
T ss_dssp ---------CTTHHHH
T ss_pred HhHHHHHHHHHHHHHH
Confidence 4566666666555543
No 101
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=31.39 E-value=41 Score=24.07 Aligned_cols=17 Identities=35% Similarity=0.390 Sum_probs=8.5
Q ss_pred HHHHHHHhhhhHHHHHh
Q 030783 42 REAHLKAQLEHVDEILR 58 (171)
Q Consensus 42 REa~lkAqLehvDEvLR 58 (171)
.-++||.+....++=||
T Consensus 56 en~qLk~E~~~wq~Rl~ 72 (81)
T 2jee_A 56 ENNHLKEQQNGWQERLQ 72 (81)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33445555555555444
No 102
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=31.13 E-value=17 Score=23.58 Aligned_cols=27 Identities=15% Similarity=0.229 Sum_probs=13.7
Q ss_pred heeHHHHHhHHhhhcChHHHHHHHHHh
Q 030783 23 ELTATELESLRSELADLEDREAHLKAQ 49 (171)
Q Consensus 23 elt~~EvesLR~Ela~~eEREa~lkAq 49 (171)
.-.+.+++.|..|+++++++-+.++++
T Consensus 30 d~v~~~~~~l~~e~~~L~~~~~~l~~~ 56 (57)
T 2wuj_A 30 AQVRKDYEIVLRKKTELEAKVNELDER 56 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334556666666666666665555554
No 103
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=29.76 E-value=46 Score=21.79 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=23.6
Q ss_pred HHhHHhhhcChHHHHHHHHHhhhhHHHHHhhh
Q 030783 29 LESLRSELADLEDREAHLKAQLEHVDEILRSA 60 (171)
Q Consensus 29 vesLR~Ela~~eEREa~lkAqLehvDEvLRsa 60 (171)
.+-|+..++.++++-+.|++.++.++..+...
T Consensus 41 ~~~L~~~~~~l~~~i~~L~~~~~~L~~~~~~~ 72 (99)
T 1q08_A 41 KGIVQERLQEVEARIAELQSMQRSLQRLNDAC 72 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35577777778888888888888888777543
No 104
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=29.45 E-value=27 Score=26.27 Aligned_cols=25 Identities=16% Similarity=0.259 Sum_probs=11.7
Q ss_pred HHHHhHHhhhcChHHHHHHHHHhhh
Q 030783 27 TELESLRSELADLEDREAHLKAQLE 51 (171)
Q Consensus 27 ~EvesLR~Ela~~eEREa~lkAqLe 51 (171)
.|+.+|..|++.+.++...++.+++
T Consensus 89 kE~~~lK~el~~~~~k~e~~~~e~~ 113 (138)
T 3hnw_A 89 KEIYDLKHELIAAQIKAESSAKEIK 113 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555444444444433
No 105
>1r8d_A Transcription activator MTAN; protein-DNA complex, transcription/DNA complex; 2.70A {Bacillus subtilis} SCOP: a.6.1.3 PDB: 1jbg_A
Probab=29.00 E-value=23 Score=24.15 Aligned_cols=26 Identities=19% Similarity=0.365 Sum_probs=11.9
Q ss_pred HHhhhcChHHHHHHHHHhhhhHHHHH
Q 030783 32 LRSELADLEDREAHLKAQLEHVDEIL 57 (171)
Q Consensus 32 LR~Ela~~eEREa~lkAqLehvDEvL 57 (171)
|...++.++++-+.|+++++.++..+
T Consensus 80 l~~~~~~l~~~i~~l~~~~~~l~~~~ 105 (109)
T 1r8d_A 80 LQSQKEILMKKKQRMDEMIQTIDRTL 105 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444443
No 106
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=28.73 E-value=50 Score=21.11 Aligned_cols=32 Identities=31% Similarity=0.298 Sum_probs=21.2
Q ss_pred cchhheeHHHHHhHHhhhcChHHHHHHHHHhh
Q 030783 19 QEKVELTATELESLRSELADLEDREAHLKAQL 50 (171)
Q Consensus 19 qekvelt~~EvesLR~Ela~~eEREa~lkAqL 50 (171)
+++|+-...|-..|++|+..+.+--++||.+|
T Consensus 28 e~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~l 59 (61)
T 1t2k_D 28 EKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLL 59 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44566666667777777777776666666654
No 107
>4dzo_A Mitotic spindle assembly checkpoint protein MAD1; homodimer, kinetochore, mitosis, spindle checkpoint protein, nucleus, cell cycle; HET: MSE; 1.76A {Homo sapiens}
Probab=28.71 E-value=30 Score=25.67 Aligned_cols=42 Identities=24% Similarity=0.392 Sum_probs=28.3
Q ss_pred HHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHhhh--hcceeEE
Q 030783 26 ATELESLRSELADLEDREAHLKAQLEHVDEILRSA--RLSGYLY 67 (171)
Q Consensus 26 ~~EvesLR~Ela~~eEREa~lkAqLehvDEvLRsa--rlsgYLy 67 (171)
..||..|+.|++.+|-|...||.--..==.-.|.| .|-||=-
T Consensus 3 ~~e~~~l~~qi~~~ekr~~RLKevF~~ks~eFReav~~LlGykI 46 (123)
T 4dzo_A 3 SKEVAELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQI 46 (123)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeEE
Confidence 36899999999999999999986543322223322 3566643
No 108
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=28.37 E-value=35 Score=24.85 Aligned_cols=36 Identities=17% Similarity=0.284 Sum_probs=20.9
Q ss_pred hheeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHH
Q 030783 22 VELTATELESLRSELADLEDREAHLKAQLEHVDEIL 57 (171)
Q Consensus 22 velt~~EvesLR~Ela~~eEREa~lkAqLehvDEvL 57 (171)
.++....++.|..+|+.+++..+.|...++..++.+
T Consensus 83 ~~~L~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~ 118 (142)
T 3gp4_A 83 AELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHL 118 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555566666666666666666666555555544
No 109
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=27.29 E-value=55 Score=24.52 Aligned_cols=24 Identities=4% Similarity=0.209 Sum_probs=19.6
Q ss_pred hHHHHHHHHHhhhhHHHHHhhhhc
Q 030783 39 LEDREAHLKAQLEHVDEILRSARL 62 (171)
Q Consensus 39 ~eEREa~lkAqLehvDEvLRsarl 62 (171)
+.+|.+.+.+++..+...|+.|+.
T Consensus 51 ak~~q~~~e~rI~~L~~~L~~A~v 74 (158)
T 2p4v_A 51 NKKRLREIDRRVRYLTKCMENLKI 74 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCee
Confidence 456777888888899999999886
No 110
>2nvn_A Hypothetical protein; structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; 2.50A {Synechococcus elongatus} SCOP: d.18.1.3
Probab=27.06 E-value=10 Score=29.05 Aligned_cols=67 Identities=24% Similarity=0.276 Sum_probs=49.4
Q ss_pred hhheeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHhhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEeeecc
Q 030783 21 KVELTATELESLRSELADLEDREAHLKAQLEHVDEILRSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGS 100 (171)
Q Consensus 21 kvelt~~EvesLR~Ela~~eEREa~lkAqLehvDEvLRsarlsgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ 100 (171)
-||||++|...+..=+..+.+--++++.|| .-.-++++=+-.--=|..+.|.| ..|=.||+..+|-
T Consensus 33 AiELTe~E~~~f~~Ll~qL~~~~~~i~~eL------M~EE~I~lE~E~~~~W~eleG~~--------~~~sLr~IL~~gR 98 (122)
T 2nvn_A 33 AVELTAAEMADFCRLVQQLAETIAAIAPEL------MPEERLQIEAESALLWLEAEGFA--------DAYELRLILASDR 98 (122)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHTSCCCS------SCSSCEEEEEECSSEEEEEEEET--------TEEEEEEEECSSS
T ss_pred heeeCHHHHHHHHHHHHHHHHHHHHHHHHh------cchhheeeeecCccEEEEeeccc--------CeeEEEEEEcCCc
Confidence 589999999999988877766555555444 44455666565556688888888 7899999988764
Q ss_pred e
Q 030783 101 C 101 (171)
Q Consensus 101 c 101 (171)
+
T Consensus 99 ~ 99 (122)
T 2nvn_A 99 R 99 (122)
T ss_dssp C
T ss_pred c
Confidence 4
No 111
>3vxj_A DYP; DYE-decolorizing peroxidase, 2,6-dimethoxyphenol, oxido; HET: HEM NAG 3DM; 1.39A {Bjerkandera adusta} PDB: 2d3q_A* 3mm2_A* 3vxi_A* 3afv_A* 3mm3_A* 3mm1_A*
Probab=26.57 E-value=10 Score=32.86 Aligned_cols=16 Identities=31% Similarity=0.584 Sum_probs=14.2
Q ss_pred ccceeeEeeecceeEe
Q 030783 89 DWLPRFIVLHGSCIFF 104 (171)
Q Consensus 89 DWlpRFVVl~G~cif~ 104 (171)
+=||+||+.+|-..||
T Consensus 414 ~~l~~fv~~~GG~YFF 429 (442)
T 3vxj_A 414 FTVPLFVIPKGGEYFF 429 (442)
T ss_dssp EECCCCEEEEEEEEEE
T ss_pred cCcCCceEECceEEEc
Confidence 3599999999999888
No 112
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=26.20 E-value=48 Score=20.64 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=17.1
Q ss_pred hhheeHHHHHhHHhhhcChHHHHHHHHHhhhhHH
Q 030783 21 KVELTATELESLRSELADLEDREAHLKAQLEHVD 54 (171)
Q Consensus 21 kvelt~~EvesLR~Ela~~eEREa~lkAqLehvD 54 (171)
+++-...++.+.++++..+..+-.++.+.|+.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~ 46 (60)
T 3htk_A 13 QVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIR 46 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555555555555455455544443
No 113
>3pbf_A Pulmonary surfactant-associated protein A; collectin, carbohydrate binding, lectin, mannose, sugar BIND protein; 1.80A {Rattus norvegicus} PDB: 1r14_A* 1r13_A* 3paq_A* 3par_A 3pak_A
Probab=26.02 E-value=24 Score=23.95 Aligned_cols=90 Identities=11% Similarity=0.065 Sum_probs=51.3
Q ss_pred HHhHHhhhcChHHHHHHHHHhhhhHHHHHhhhhcceeEEEee--ecc-------cCCCCCCCCCCCCccccceeeEeeec
Q 030783 29 LESLRSELADLEDREAHLKAQLEHVDEILRSARLSGYLYIRT--RWK-------PLPGEPPPIDDTDVDDWLPRFIVLHG 99 (171)
Q Consensus 29 vesLR~Ela~~eEREa~lkAqLehvDEvLRsarlsgYLyiRt--RW~-------aLpgEpppiDDtdVDDWlpRFVVl~G 99 (171)
.|.|+++++.++++-+.++.++ .+......-.=++|.+... .|. ...|.--.|++.+-.++|-.++--.+
T Consensus 4 ~e~l~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~Cy~~~~~~~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~ 82 (148)
T 3pbf_A 4 DEELQTELYEIKHQILQTMGVL-SLQGSMLSVGDKVFSTNGQSVNFDTIKEMCTRAGGNIAVPRTPEENEAIASIAKKYN 82 (148)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHTTSCEEETTEEEEEEEEEECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhcceeeCCEEEEEcCCccCHHHHHHHHhhcCCEEeeeCCHHHHHHHHHHHHhCC
Confidence 3566666666666666666665 2222223333456766542 342 46677778888888888877664444
Q ss_pred ceeEeEeeeCCCCCCCcceeeh
Q 030783 100 SCIFFYLLSTDLSPQDSTVLSD 121 (171)
Q Consensus 100 ~cif~yL~sTDLsPqdStllsd 121 (171)
-.|++-.+|....++-.-.|
T Consensus 83 --~~~WIGl~~~~~~~~w~W~d 102 (148)
T 3pbf_A 83 --NYVYLGMIEDQTPGDFHYLD 102 (148)
T ss_dssp --SCEEEEEEECSSTTCEEETT
T ss_pred --CCEEEEeEecCCCCceEeCC
Confidence 24555556665444443333
No 114
>3zwh_Q Myosin-9; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} PDB: 2lnk_C
Probab=25.89 E-value=21 Score=23.18 Aligned_cols=32 Identities=22% Similarity=0.401 Sum_probs=23.9
Q ss_pred HHhhhcChHHHHHHHHHhhhhHHHHHhhhhcc
Q 030783 32 LRSELADLEDREAHLKAQLEHVDEILRSARLS 63 (171)
Q Consensus 32 LR~Ela~~eEREa~lkAqLehvDEvLRsarls 63 (171)
+.-||.+++||-..+..|+.++--=+|...+|
T Consensus 4 lQrELeEa~Erae~ae~~vnkLR~k~R~~~~~ 35 (45)
T 3zwh_Q 4 LQRELEDATETADAMNREVSSLKNKLRRGDLP 35 (45)
T ss_dssp SSSHHHHHTTTHHHHHHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 44578889999999999988877666555443
No 115
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=25.41 E-value=49 Score=23.89 Aligned_cols=37 Identities=19% Similarity=0.209 Sum_probs=31.5
Q ss_pred cchhheeHHHHHhHHhhhcChHHHHHHHHHhhhhHHH
Q 030783 19 QEKVELTATELESLRSELADLEDREAHLKAQLEHVDE 55 (171)
Q Consensus 19 qekvelt~~EvesLR~Ela~~eEREa~lkAqLehvDE 55 (171)
.+|+.-..+|+++|..+-+.+++.-..+..+|.++=|
T Consensus 5 ~~~~~~Lk~El~~L~~~E~~LD~~i~~~~~~l~~lte 41 (106)
T 2aze_B 5 GGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSE 41 (106)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4567788899999999999999999988888888753
No 116
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=25.24 E-value=57 Score=22.78 Aligned_cols=32 Identities=19% Similarity=0.365 Sum_probs=24.4
Q ss_pred HHHHhHHhhhcChHHHHHHHHHhhhhHHHHHh
Q 030783 27 TELESLRSELADLEDREAHLKAQLEHVDEILR 58 (171)
Q Consensus 27 ~EvesLR~Ela~~eEREa~lkAqLehvDEvLR 58 (171)
..|++|...|.+..++..++++.|.++=|+|-
T Consensus 21 ~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld 52 (72)
T 3cve_A 21 GQLSEMEQRLEKSQSEQDAFRSNLKTLLEILD 52 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34677777888888888888888888777763
No 117
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=24.80 E-value=70 Score=24.05 Aligned_cols=46 Identities=15% Similarity=0.137 Sum_probs=29.0
Q ss_pred eeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHhh----hhcceeEEEe
Q 030783 24 LTATELESLRSELADLEDREAHLKAQLEHVDEILRS----ARLSGYLYIR 69 (171)
Q Consensus 24 lt~~EvesLR~Ela~~eEREa~lkAqLehvDEvLRs----arlsgYLyiR 69 (171)
.+..|++..+.++..++.+-+..+|+|+....-|.. |-++|++..+
T Consensus 95 ~s~~~~~~a~~~~~~a~a~l~~a~a~l~~a~~~l~~~~I~AP~~G~V~~~ 144 (277)
T 2f1m_A 95 ISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKS 144 (277)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEECCSSCEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEeE
Confidence 345566666666666666666667777766666654 4568887543
No 118
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=24.74 E-value=51 Score=27.22 Aligned_cols=23 Identities=26% Similarity=0.306 Sum_probs=15.0
Q ss_pred cchhheeHHHHHhHHhhhcChHH
Q 030783 19 QEKVELTATELESLRSELADLED 41 (171)
Q Consensus 19 qekvelt~~EvesLR~Ela~~eE 41 (171)
+.++|-..+|.+.|+.|++.+|.
T Consensus 184 ~~eie~L~~~~~~L~eEi~~Le~ 206 (315)
T 2ve7_A 184 AFKLESLEAKNRALNEQIARLEQ 206 (315)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666777777777777743
No 119
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=24.64 E-value=38 Score=22.31 Aligned_cols=32 Identities=16% Similarity=0.291 Sum_probs=19.8
Q ss_pred hhheeHHHHHhHHhhhcChHHHHHHHHHhhhh
Q 030783 21 KVELTATELESLRSELADLEDREAHLKAQLEH 52 (171)
Q Consensus 21 kvelt~~EvesLR~Ela~~eEREa~lkAqLeh 52 (171)
||.-+..+|.+||+++..+.+--+.-..+|+|
T Consensus 19 kVdqLssdV~al~~~v~~ak~eA~RAN~RlDN 50 (52)
T 1jcd_A 19 KADQASNDANAARSDAQAAKDDAARANQRADN 50 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 55556667777777777666554444555544
No 120
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=24.63 E-value=91 Score=25.94 Aligned_cols=20 Identities=30% Similarity=0.233 Sum_probs=14.2
Q ss_pred HHHHHHHHHhhhhHHHHHhh
Q 030783 40 EDREAHLKAQLEHVDEILRS 59 (171)
Q Consensus 40 eEREa~lkAqLehvDEvLRs 59 (171)
.=-|+.|.||-+-|..-|..
T Consensus 372 ~~~~~~~~~q~~~~~~~~~~ 391 (406)
T 4dyl_A 372 LCSQAKLQAQQELLQTKLEH 391 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHHHHHHh
Confidence 33477888888888777754
No 121
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=24.28 E-value=60 Score=22.98 Aligned_cols=31 Identities=13% Similarity=0.352 Sum_probs=22.6
Q ss_pred HHHhHHhhhcChHHHHHHHHHhhhhHHHHHh
Q 030783 28 ELESLRSELADLEDREAHLKAQLEHVDEILR 58 (171)
Q Consensus 28 EvesLR~Ela~~eEREa~lkAqLehvDEvLR 58 (171)
.|++|...|.+..++..++++.|.++=|+|-
T Consensus 28 ~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld 58 (79)
T 3cvf_A 28 QLRAMERSLEEARAERERARAEVGRAAQLLD 58 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566777777777777888888887777663
No 122
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=23.83 E-value=29 Score=21.73 Aligned_cols=20 Identities=25% Similarity=0.321 Sum_probs=11.5
Q ss_pred HhhhcChHHHHHHHHHhhhh
Q 030783 33 RSELADLEDREAHLKAQLEH 52 (171)
Q Consensus 33 R~Ela~~eEREa~lkAqLeh 52 (171)
++.++.+|+|-+.|+++|+.
T Consensus 48 ~~~~~~Le~ri~~Le~~l~~ 67 (72)
T 2er8_A 48 RARNEAIEKRFKELTRTLTN 67 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34555556666666666654
No 123
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=23.22 E-value=45 Score=26.97 Aligned_cols=35 Identities=23% Similarity=0.434 Sum_probs=26.1
Q ss_pred chhheeHHHHHhHHhhhcChHHHHHHHHHhhhhHH
Q 030783 20 EKVELTATELESLRSELADLEDREAHLKAQLEHVD 54 (171)
Q Consensus 20 ekvelt~~EvesLR~Ela~~eEREa~lkAqLehvD 54 (171)
+.++-..++++.|+.+++++.++-..++|..+|+-
T Consensus 59 ~e~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~R 93 (213)
T 4ani_A 59 EELAAAKAQIAELEAKLSEMEHRYLRLYADFENFR 93 (213)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555677888888888888888777888777753
No 124
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=23.14 E-value=66 Score=23.37 Aligned_cols=42 Identities=12% Similarity=0.219 Sum_probs=33.1
Q ss_pred cchhheeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHhhh
Q 030783 19 QEKVELTATELESLRSELADLEDREAHLKAQLEHVDEILRSA 60 (171)
Q Consensus 19 qekvelt~~EvesLR~Ela~~eEREa~lkAqLehvDEvLRsa 60 (171)
+|-+++...-++.|...+..+++..+.+++++..+-+.++..
T Consensus 97 ~eA~~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~l 138 (151)
T 2zdi_C 97 DEAISFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEV 138 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666778888889999999999999998888888754
No 125
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=22.97 E-value=63 Score=27.78 Aligned_cols=33 Identities=30% Similarity=0.313 Sum_probs=22.1
Q ss_pred HHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHh
Q 030783 26 ATELESLRSELADLEDREAHLKAQLEHVDEILR 58 (171)
Q Consensus 26 ~~EvesLR~Ela~~eEREa~lkAqLehvDEvLR 58 (171)
.+|+++||.++.++++.-.+++++++.+-|-|.
T Consensus 9 ~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 41 (412)
T 3u06_A 9 STEVVHLRQRTEELLRCNEQQAAELETCKEQLF 41 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467777777777777777666666666655543
No 126
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=22.96 E-value=58 Score=24.29 Aligned_cols=23 Identities=9% Similarity=0.391 Sum_probs=17.1
Q ss_pred HHHHHHHHHhhhhHHHHHhhhhc
Q 030783 40 EDREAHLKAQLEHVDEILRSARL 62 (171)
Q Consensus 40 eEREa~lkAqLehvDEvLRsarl 62 (171)
.++.+.+.+++..+.+.|+.|+.
T Consensus 52 k~~q~~~e~ri~~Le~~L~~a~v 74 (158)
T 1grj_A 52 REQQGFCEGRIKDIEAKLSNAQV 74 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhCee
Confidence 34455666788888888888886
No 127
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=22.78 E-value=43 Score=29.77 Aligned_cols=31 Identities=23% Similarity=0.248 Sum_probs=21.1
Q ss_pred hhheeHHHHHhHHhhhcChHHHHHHHHHhhh
Q 030783 21 KVELTATELESLRSELADLEDREAHLKAQLE 51 (171)
Q Consensus 21 kvelt~~EvesLR~Ela~~eEREa~lkAqLe 51 (171)
..+-..+|+..|+.+|+.+|+..+.++++|.
T Consensus 117 ~~~~l~~~~~~l~~~i~~l~~~~~~~~~~l~ 147 (501)
T 1wle_A 117 QYQSLRARGREIRKQLTLLYPKEAQLEEQFY 147 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566777777777777777777776664
No 128
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=21.45 E-value=42 Score=24.33 Aligned_cols=40 Identities=10% Similarity=0.105 Sum_probs=29.5
Q ss_pred chhheeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHhhhhc
Q 030783 20 EKVELTATELESLRSELADLEDREAHLKAQLEHVDEILRSARL 62 (171)
Q Consensus 20 ekvelt~~EvesLR~Ela~~eEREa~lkAqLehvDEvLRsarl 62 (171)
.++-+|....+.|+.|+..+..++. .++..+.+.|+.|+.
T Consensus 4 ~~i~iT~~d~~rL~~~l~~~~~~~~---~~i~~L~~~L~~A~v 43 (136)
T 3bmb_A 4 PTIIINDLDAERIDILLEQPAYAGL---PIADALNAELDRAQM 43 (136)
T ss_dssp CCCEEEHHHHHHHHHHHHSGGGTTC---HHHHHHHHHHHTCEE
T ss_pred CceEECHHHHHHHHHHHHhhhhcCc---HHHHHHHHHHhccEE
Confidence 3578999999999999988764432 245566677888876
No 129
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=21.11 E-value=88 Score=22.97 Aligned_cols=42 Identities=21% Similarity=0.393 Sum_probs=29.8
Q ss_pred eeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHHhhhhccee
Q 030783 24 LTATELESLRSELADLEDREAHLKAQLEHVDEILRSARLSGY 65 (171)
Q Consensus 24 lt~~EvesLR~Ela~~eEREa~lkAqLehvDEvLRsarlsgY 65 (171)
+|..++.+||.||..++-=-..|+.+.+.+.--|-...|-|+
T Consensus 9 ~~~e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~~~l~Gd 50 (100)
T 1go4_E 9 FSREEADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGD 50 (100)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSC
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 388999999999999986556676666666555544445454
No 130
>3ub6_A Chemoreceptor TLPB; homodimer, four-helix bundle, PAS domain, membrane protein; 1.38A {Helicobacter pylori} PDB: 3ub7_A 3ub8_A 3ub9_A*
Probab=20.83 E-value=1.3e+02 Score=22.29 Aligned_cols=46 Identities=15% Similarity=0.179 Sum_probs=24.8
Q ss_pred heeHHHHHhHHhhhcChHHHHHHHHHhhhh--------------------HHHHHhhhhc--c-eeEEEee
Q 030783 23 ELTATELESLRSELADLEDREAHLKAQLEH--------------------VDEILRSARL--S-GYLYIRT 70 (171)
Q Consensus 23 elt~~EvesLR~Ela~~eEREa~lkAqLeh--------------------vDEvLRsarl--s-gYLyiRt 70 (171)
++...+++++|..+ +++|+++|++..+- +=+.|+..|+ + ||+|+-.
T Consensus 8 ~~~~~~~~~~~~~l--~~~r~~~l~~~v~~a~~~i~~~~~~~~~~ea~~~a~~~l~~~r~g~~~gY~fv~d 76 (181)
T 3ub6_A 8 DVLAQLMEHLETGQ--YKKREKTLAYMTKILEQGIHEYYKSFDNDTARKMALDYFKRINDDKGMIYMVVVD 76 (181)
T ss_dssp --CHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCSSCEEEEEC
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCccCCCCCEEEEEe
Confidence 44556666666654 45555555544321 2245666676 3 7999864
No 131
>1r8d_A Transcription activator MTAN; protein-DNA complex, transcription/DNA complex; 2.70A {Bacillus subtilis} SCOP: a.6.1.3 PDB: 1jbg_A
Probab=20.45 E-value=72 Score=21.64 Aligned_cols=21 Identities=10% Similarity=0.169 Sum_probs=7.8
Q ss_pred HHHHhHHhhhcChHHHHHHHH
Q 030783 27 TELESLRSELADLEDREAHLK 47 (171)
Q Consensus 27 ~EvesLR~Ela~~eEREa~lk 47 (171)
+..+.|..+++.+++..+.+.
T Consensus 82 ~~~~~l~~~i~~l~~~~~~l~ 102 (109)
T 1r8d_A 82 SQKEILMKKKQRMDEMIQTID 102 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333
No 132
>2khk_A ATP synthase subunit B; F1FO ATP synthase, spectroscopy, ATP synthesis, inner membrane, cell membrane, CF(0), hydrogen ION transpor transport; NMR {Escherichia coli}
Probab=20.18 E-value=81 Score=18.87 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=21.0
Q ss_pred HHhhhcChHHHHHHHHHhhhhHHHHHhhhh
Q 030783 32 LRSELADLEDREAHLKAQLEHVDEILRSAR 61 (171)
Q Consensus 32 LR~Ela~~eEREa~lkAqLehvDEvLRsar 61 (171)
..+.|.++++......+-+....+.|..||
T Consensus 11 I~~~l~~A~~~~~ea~~~~~~~e~~l~~Ar 40 (53)
T 2khk_A 11 IADGLASAERAHKDLDLAKASATDQLKKAK 40 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777777777777777777777665
No 133
>1r8e_A Multidrug-efflux transporter regulator; protein-DNA complex, MERR-family transcription activator, MU binding protein; HET: P4P; 2.40A {Bacillus subtilis} SCOP: a.6.1.3 d.60.1.1 PDB: 1exi_A* 1exj_A* 3iao_A 3q5p_A* 3d71_A* 3q3d_A* 3q1m_A* 3q2y_A* 3q5r_A* 3q5s_A* 3d70_A 3d6z_A* 3d6y_A* 1bow_A 2bow_A*
Probab=20.14 E-value=82 Score=23.68 Aligned_cols=35 Identities=11% Similarity=0.157 Sum_probs=19.0
Q ss_pred heeHHHHHhHHhhhcChHHHHHHHHHhhhhHHHHH
Q 030783 23 ELTATELESLRSELADLEDREAHLKAQLEHVDEIL 57 (171)
Q Consensus 23 elt~~EvesLR~Ela~~eEREa~lkAqLehvDEvL 57 (171)
++.....+.|+.+++.+.+..+.|++.++.+.+..
T Consensus 82 ~~l~~~~~~l~~~i~~l~~~~~~l~~~~~~~~~~~ 116 (278)
T 1r8e_A 82 AFYTEQERQIREKLDFLSALEQTISLVKKRMKRQM 116 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44555555555555555555555555555554443
Done!