BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030788
(171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93395|PSB6_TOBAC Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2 SV=1
Length = 234
Score = 312 bits (799), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 147/166 (88%), Positives = 158/166 (95%)
Query: 3 LKMEDFNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSG 62
++ D + PHSMGTTIIGVTYNGGVVLGADSRTSTG+YVANRASDKITQLTDNVY+CRSG
Sbjct: 1 MENTDVDQPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSG 60
Query: 63 SAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 122
SAADSQ VSDYVRYFLHQHTIQLGQPATVKVAANL RLLSYNNK+ LQTGMI+GGWDKYE
Sbjct: 61 SAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDRLQTGMIIGGWDKYE 120
Query: 123 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
GGKIYG+P GGT++EQPFAIGGSGSSYLYGFFDQAWKEGMT+EEAE
Sbjct: 121 GGKIYGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAE 166
>sp|Q8LD27|PSB6_ARATH Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1
SV=2
Length = 233
Score = 311 bits (798), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 147/168 (87%), Positives = 160/168 (95%), Gaps = 3/168 (1%)
Query: 1 MDLKMEDFNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCR 60
MDL ++ APHSMGTTIIGVTYNGGVVLGADSRTSTG+YVANRASDKITQLTDNVY+CR
Sbjct: 1 MDLNLD---APHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCR 57
Query: 61 SGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDK 120
SGSAADSQ VSDYVRYFLHQHTIQ GQPATVKV+ANL+R+L+YNNKN LQTG+IVGGWDK
Sbjct: 58 SGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDK 117
Query: 121 YEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
YEGGKIYG+PLGGT++EQPFAIGGSGSSYLYGFFDQAWK+ MTKEEAE
Sbjct: 118 YEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAE 165
>sp|Q55GJ6|PSB6_DICDI Proteasome subunit beta type-6 OS=Dictyostelium discoideum GN=psmB6
PE=1 SV=1
Length = 214
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 121/154 (78%)
Query: 14 MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDY 73
+GT+I+ V Y+GGV++GADSRT+TG Y+ANR ++KIT + + +Y CRSGSAAD+Q +SDY
Sbjct: 13 LGTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHERIYCCRSGSAADTQAISDY 72
Query: 74 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
VRY+L HT +L VK AA+L +LL Y+NKN L G+IV GWDK++GG +Y + LGG
Sbjct: 73 VRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQGGSVYNISLGG 132
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
++++QPFAIGGSGS+Y+YG+ D +K MTK+E
Sbjct: 133 SMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDEC 166
>sp|Q3MHN0|PSB6_BOVIN Proteasome subunit beta type-6 OS=Bos taurus GN=PSMB6 PE=1 SV=1
Length = 239
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 116/154 (75%)
Query: 13 SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSD 72
S GTTI+ V ++GGVVLGADSRT+TG Y+ANR +DK+T + D ++ CRSGSAAD+Q V+D
Sbjct: 32 STGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVAD 91
Query: 73 YVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLG 132
V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+G
Sbjct: 92 AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMG 151
Query: 133 GTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEE 166
G ++ QPFAIGGSGSSY+YG+ D ++EGMTKEE
Sbjct: 152 GMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEE 185
>sp|O43063|PSB1_SCHPO Probable proteasome subunit beta type-1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pre3 PE=3 SV=1
Length = 226
Score = 189 bits (480), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 114/154 (74%)
Query: 14 MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDY 73
MGTTI + Y GV+L ADSRT+ G Y+ANR +DK+TQLTDN++ CRSGSAAD+QTV+D
Sbjct: 23 MGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADL 82
Query: 74 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
++Y+L + IQ G +V AA L + Y NKN L G+IV G+D+ GG +Y +PLGG
Sbjct: 83 LKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSIPLGG 142
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
++ +QP AIGGSGS+++YGF D ++E MT+EEA
Sbjct: 143 SLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEA 176
>sp|Q60692|PSB6_MOUSE Proteasome subunit beta type-6 OS=Mus musculus GN=Psmb6 PE=1 SV=3
Length = 238
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 116/154 (75%)
Query: 13 SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSD 72
S GTTI+ V +NGGVVLGADSRT+TG Y+ANR +DK+T + D+++ CRSGSAAD+Q V+D
Sbjct: 31 STGTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVAD 90
Query: 73 YVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLG 132
V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+G
Sbjct: 91 AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMG 150
Query: 133 GTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEE 166
G ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E
Sbjct: 151 GMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDE 184
>sp|P28072|PSB6_HUMAN Proteasome subunit beta type-6 OS=Homo sapiens GN=PSMB6 PE=1 SV=4
Length = 239
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 115/154 (74%)
Query: 13 SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSD 72
S GTTI+ V ++GGVVLGADSRT+TG Y+ANR +DK+T + D ++ CRSGSAAD+Q V+D
Sbjct: 32 STGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVAD 91
Query: 73 YVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLG 132
V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+G
Sbjct: 92 AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMG 151
Query: 133 GTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEE 166
G ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE
Sbjct: 152 GMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEE 185
>sp|P28073|PSB6_RAT Proteasome subunit beta type-6 OS=Rattus norvegicus GN=Psmb6 PE=1
SV=3
Length = 238
Score = 186 bits (473), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 116/154 (75%)
Query: 13 SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSD 72
S GTTI+ V ++GGVVLGADSRT+TG Y+ANR +DK+T + D+++ CRSGSAAD+Q V+D
Sbjct: 31 STGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVAD 90
Query: 73 YVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLG 132
V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+G
Sbjct: 91 AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMG 150
Query: 133 GTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEE 166
G ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E
Sbjct: 151 GMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDE 184
>sp|P38624|PSB1_YEAST Proteasome subunit beta type-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRE3 PE=1 SV=2
Length = 215
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 117/154 (75%), Gaps = 1/154 (0%)
Query: 13 SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSD 72
S+GT+I+ VT+ GV+LGADSRT+TG Y+ANR +DK+T++ D ++ CRSGSAAD+Q ++D
Sbjct: 17 SLGTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIAD 76
Query: 73 YVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLG 132
V+Y L +T Q G P+T + AA++ + L Y NK+ L G+IV G+D G++Y +PLG
Sbjct: 77 IVQYHLELYTSQYGTPST-ETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLG 135
Query: 133 GTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEE 166
G++ + P+AI GSGS+++YG+ D+ ++E M+KEE
Sbjct: 136 GSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEE 169
>sp|Q8UW64|PSB9_ORYLA Proteasome subunit beta type-9 OS=Oryzias latipes GN=psmb9 PE=3
SV=1
Length = 217
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 107/154 (69%), Gaps = 1/154 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTII + +NGGVVLG+DSR S G V NR +K++ L D +Y SGSAAD+QT+++ V
Sbjct: 18 GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHDKIYCALSGSAADAQTIAEMV 77
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H++++ + V+ AA LV+ +SY K L +IV GWD+ +GG+++ LGG
Sbjct: 78 NYQLDVHSLEIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRDGGQVFAT-LGGL 136
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
+ QPFAIGGSGSSY+YGF D ++ GMTKEE +
Sbjct: 137 LTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQ 170
>sp|A7KE01|PB6LA_SALSA Proteasome subunit beta type-6-A like protein OS=Salmo salar
GN=psmb6l-a PE=3 SV=1
Length = 217
Score = 160 bits (404), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 109/156 (69%), Gaps = 1/156 (0%)
Query: 13 SMGTTIIGVTYNGGVVLGADSRTSTG-VYVANRASDKITQLTDNVYLCRSGSAADSQTVS 71
S GTTI+ VT+NGGV++G+DSR S G YV+++ +K+ Q+ D ++ C +GS AD+Q V+
Sbjct: 14 STGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVT 73
Query: 72 DYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPL 131
++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G ++Y V L
Sbjct: 74 KAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVAL 133
Query: 132 GGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
GG ++ QPF IGGSGS+Y+YG+ D +K M+KEE
Sbjct: 134 GGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEEC 169
>sp|A7KII6|PB6LB_SALSA Proteasome subunit beta type-6-B like protein OS=Salmo salar
GN=psmb6l-b PE=3 SV=1
Length = 217
Score = 160 bits (404), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 109/156 (69%), Gaps = 1/156 (0%)
Query: 13 SMGTTIIGVTYNGGVVLGADSRTSTG-VYVANRASDKITQLTDNVYLCRSGSAADSQTVS 71
S GTTI+ VT+NGGV++G+DSR S G YV+++ +K+ Q+ D ++ C +GS AD+Q V+
Sbjct: 14 STGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVT 73
Query: 72 DYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPL 131
++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G ++Y V L
Sbjct: 74 KAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVAL 133
Query: 132 GGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
GG ++ QPF IGGSGS+Y+YG+ D +K M+KEE
Sbjct: 134 GGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEEC 169
>sp|P28065|PSB9_HUMAN Proteasome subunit beta type-9 OS=Homo sapiens GN=PSMB9 PE=1 SV=2
Length = 219
Score = 159 bits (402), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L + +Y SGSAAD+Q V+D
Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H I+L +P V AAN+VR +SY + L ++V GWD+ EGG++YG LGG
Sbjct: 80 AYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGT-LGGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEE 166
+ QPFAIGGSGS+++YG+ D A+K GM+ EE
Sbjct: 139 LTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEE 170
>sp|Q9PT26|PSB9_ONCMY Proteasome subunit beta type-9 OS=Oncorhynchus mykiss GN=psmb9 PE=2
SV=1
Length = 217
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 107/154 (69%), Gaps = 1/154 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTII + ++GGVVLG+DSR S G V NR +K++ L D +Y SGSAAD+QT+++ V
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMV 77
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK GG++Y V L G
Sbjct: 78 NYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEDLSAHLIVAGWDKRGGGQVY-VTLNGL 136
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
+ QPFA+GGSGSSY+YGF D +++ M+KE+ +
Sbjct: 137 LSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQ 170
>sp|Q3SZC2|PSB9_BOVIN Proteasome subunit beta type-9 OS=Bos taurus GN=PSMB9 PE=1 SV=1
Length = 219
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++Y SGSAAD+Q ++D
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCALSGSAADAQAIADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H ++L +P V AAN+VR ++Y + L ++V GWD+ EGG++YG + G
Sbjct: 80 AYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQREGGQVYGT-MSGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEE 166
+I QPFAIGGSGS+Y+YG+ D A+K GM+ EE
Sbjct: 139 LIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEE 170
>sp|Q9DD33|PSB9_SALSA Proteasome subunit beta type-9 OS=Salmo salar GN=psmb9-a PE=2 SV=1
Length = 217
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 107/154 (69%), Gaps = 1/154 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTII + ++GGVVLG+DSR S G V NR +K++ L D +Y SGSAAD+QT+++ V
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMV 77
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK GG++Y V L G
Sbjct: 78 NYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQVY-VTLNGL 136
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
+ QPFA+GGSGS+Y+YGF D +++ M+KE+ +
Sbjct: 137 LSRQPFAVGGSGSAYVYGFVDAEYRKAMSKEDCQ 170
>sp|P28077|PSB9_RAT Proteasome subunit beta type-9 OS=Rattus norvegicus GN=Psmb9 PE=1
SV=2
Length = 219
Score = 149 bits (376), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L +Y SGSAAD+Q ++D
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAIADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H ++L +P V AAN+V+ +SY + L ++V GWD++EGG++YG +GG
Sbjct: 80 AYQLELHGLELEEPPLVLAAANIVKNISYKYREDLLAHLMVAGWDQHEGGQVYGT-MGGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
+I QPFAIGGSGS+Y+YG+ D A+K GMT EE
Sbjct: 139 LIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECR 172
>sp|O35521|PSB9_MUSDU Proteasome subunit beta type-9 OS=Mus dunni GN=Psmb9 PE=1 SV=1
Length = 219
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 104/154 (67%), Gaps = 1/154 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG
Sbjct: 80 AYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
+I QPF IGGSGSSY+YG+ D A+K GMT EE
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECR 172
>sp|P28076|PSB9_MOUSE Proteasome subunit beta type-9 OS=Mus musculus GN=Psmb9 PE=1 SV=1
Length = 219
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 104/154 (67%), Gaps = 1/154 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG
Sbjct: 80 AYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
+I QPF IGGSGSSY+YG+ D A+K GMT EE
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECR 172
>sp|O35524|PSB9_MUSSI Proteasome subunit beta type-9 OS=Mus spicilegus GN=Psmb9 PE=1 SV=1
Length = 219
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 104/154 (67%), Gaps = 1/154 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG
Sbjct: 80 AYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
+I QPF IGGSGSSY+YG+ D A+K GMT EE
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECR 172
>sp|O35523|PSB9_MUSPL Proteasome subunit beta type-9 OS=Mus platythrix GN=Psmb9 PE=1 SV=1
Length = 219
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 104/154 (67%), Gaps = 1/154 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG
Sbjct: 80 AYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
+I QPF IGGSGSSY+YG+ D A+K GMT EE
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTSEECR 172
>sp|O35522|PSB9_MUSMB Proteasome subunit beta type-9 OS=Mus musculus bactrianus GN=Psmb9
PE=1 SV=1
Length = 219
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG
Sbjct: 80 AYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
+I QPF I GSGSSY+YG+ D A+K GMT EE
Sbjct: 139 LIRQPFTISGSGSSYIYGYVDAAYKPGMTPEECR 172
>sp|Q8SR11|PSB1_ENCCU Probable proteasome subunit beta type-1 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=PRE3 PE=1 SV=1
Length = 203
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 108/158 (68%), Gaps = 3/158 (1%)
Query: 9 NAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQ 68
N GTTII + Y+ GV++GADSRTS G YV++R +DK+TQ+TD +++CRSGS+AD+Q
Sbjct: 4 NEKEMTGTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQ 63
Query: 69 TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYG 128
+S Y+R +L ++ V+ AA L + Y N + L G+IV G+D + +++
Sbjct: 64 MISSYLRMYLSMYSQLEDSIPQVQRAAALASKIIYENPSLL-AGLIVAGYD--DKPRVFN 120
Query: 129 VPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEE 166
+ LGG++ E+ +AIGGSGS+++YG+ D W+ GM+ EE
Sbjct: 121 ISLGGSLTERDWAIGGSGSAFIYGYCDVNWRSGMSLEE 158
>sp|Q7DLS1|PSB7B_ARATH Proteasome subunit beta type-7-B OS=Arabidopsis thaliana GN=PBB2
PE=1 SV=2
Length = 274
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 93/166 (56%), Gaps = 3/166 (1%)
Query: 3 LKMEDFNAPHSM--GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCR 60
L + AP + GTTI+G+ + GV+LGAD+R + G VA++ +KI + N+Y C
Sbjct: 25 LTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG 84
Query: 61 SGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDK 120
+G+AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D
Sbjct: 85 AGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVD- 143
Query: 121 YEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEE 166
G ++ + G+ PFA GSGS F+ +KEG+T++E
Sbjct: 144 ITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDE 189
>sp|O23710|PSB7A_ARATH Proteasome subunit beta type-7-A OS=Arabidopsis thaliana GN=PBB1
PE=1 SV=2
Length = 273
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 93/166 (56%), Gaps = 3/166 (1%)
Query: 3 LKMEDFNAPHSM--GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCR 60
L + AP + GTTI+G+ + GV+LGAD+R + G VA++ +KI + N+Y C
Sbjct: 25 LTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG 84
Query: 61 SGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDK 120
+G+AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D
Sbjct: 85 AGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVD- 143
Query: 121 YEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEE 166
G ++ + G+ PFA GSGS F+ +KEG+T++E
Sbjct: 144 ITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDE 189
>sp|A9A2U7|PSB2_NITMS Proteasome subunit beta 2 OS=Nitrosopumilus maritimus (strain SCM1)
GN=psmB2 PE=3 SV=1
Length = 210
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 89/155 (57%), Gaps = 2/155 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ GVVL AD R S G ++AN + KI ++ D+ L +G AD+Q + D +
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQNIVDIL 71
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGG 133
RY + H ++ P ++ A L L+ + N+ + ++VGG+D EG ++ + + G
Sbjct: 72 RYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDA-EGPALFNIDMFG 130
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
++ ++ + GSGS YG ++ ++E +T EEA+
Sbjct: 131 SVEKKAYVTTGSGSPVAYGLLEEEYREDLTVEEAK 165
>sp|A0RXV1|PSB2_CENSY Proteasome subunit beta 2 OS=Cenarchaeum symbiosum (strain A)
GN=psmB2 PE=3 SV=2
Length = 210
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 86/155 (55%), Gaps = 2/155 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ GVVL AD R S G ++AN + KI ++ D+ L +G AD+Q + D +
Sbjct: 12 GTTTVGIKATDGVVLCADMRASAGYFIANNNTMKIQRIDDHAGLTLAGGVADAQNIVDVL 71
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGG 133
RY H I+ P +K A L L+ + N+ + +++GG+D G +Y + + G
Sbjct: 72 RYHASLHRIRKQGPIPIKSLARLTSLIFHQNRGYPFMADILMGGFDAV-GPALYNIDMFG 130
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
++ E+ + GSGS YG ++ ++ +T +EA+
Sbjct: 131 SVEEKSYVTTGSGSPVAYGTLEEEYRADLTADEAK 165
>sp|Q9JHW0|PSB7_RAT Proteasome subunit beta type-7 OS=Rattus norvegicus GN=Psmb7 PE=1
SV=1
Length = 277
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 3/169 (1%)
Query: 2 DLKMEDFNAPHS--MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLC 59
D + F P + GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C
Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCC 87
Query: 60 RSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD 119
+G+AAD+ + + L H++ G+ V A +++ + + + ++ +++GG D
Sbjct: 88 GAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD 147
Query: 120 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
G +Y + G+ + P+ GSGS F+ ++ M +EEA+
Sbjct: 148 -VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAK 195
>sp|P70195|PSB7_MOUSE Proteasome subunit beta type-7 OS=Mus musculus GN=Psmb7 PE=1 SV=1
Length = 277
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 3/169 (1%)
Query: 2 DLKMEDFNAPHS--MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLC 59
D + F P + GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C
Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCC 87
Query: 60 RSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD 119
+G+AAD+ + + L H++ G+ V A +++ + + + ++ +++GG D
Sbjct: 88 GAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD 147
Query: 120 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
G +Y + G+ + P+ GSGS F+ ++ M +EEA+
Sbjct: 148 -VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAK 195
>sp|Q99436|PSB7_HUMAN Proteasome subunit beta type-7 OS=Homo sapiens GN=PSMB7 PE=1 SV=1
Length = 277
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+
Sbjct: 103 SSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGS 161
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
+ P+ GSGS F+ ++ M +EEA+
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAK 195
>sp|Q2TBP0|PSB7_BOVIN Proteasome subunit beta type-7 OS=Bos taurus GN=PSMB7 PE=1 SV=1
Length = 277
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+
Sbjct: 103 SSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGS 161
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
+ P+ GSGS F+ ++ M +EEA+
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAK 195
>sp|A3MS44|PSB1_PYRCJ Proteasome subunit beta 1 OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=psmB1 PE=3 SV=1
Length = 201
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 85/153 (55%), Gaps = 1/153 (0%)
Query: 16 TTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVR 75
TT +G+ GVVL D R + G Y+A++A +KI ++ D+V SG AD Q+V ++
Sbjct: 2 TTTVGIVAKDGVVLATDKRVTAGYYIAHKAGEKIWKIDDHVAATMSGGVADLQSVLSFLS 61
Query: 76 YFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFL-QTGMIVGGWDKYEGGKIYGVPLGGT 134
++ ++ +P ++ N V LL + ++ ++ IVGG D EG +Y V GT
Sbjct: 62 LRAREYRVEHKRPIPIRALVNYVSLLLFYSRPYIYLVHSIVGGVDAEEGPVLYMVDWLGT 121
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
+ ++ + GSGS Y G + A++E +T +EA
Sbjct: 122 VTKEKYIATGSGSPYAKGALEVAYREDLTIDEA 154
>sp|A1XQU1|PSB7_PIG Proteasome subunit beta type-7 OS=Sus scrofa GN=PSMB7 PE=2 SV=2
Length = 277
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+
Sbjct: 103 SSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGS 161
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
+ P+ GSGS F+ ++ M +EEA+
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPEMEEEEAK 195
>sp|Q8ZYF2|PSB1_PYRAE Proteasome subunit beta 1 OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=psmB1 PE=3 SV=1
Length = 202
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 1/153 (0%)
Query: 16 TTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVR 75
TT +G+ GVVL D R + G Y+A++ +KI ++ D+V SG AD Q+V ++
Sbjct: 2 TTTVGIAVKDGVVLATDKRVTAGYYIAHKRGEKIWKIDDHVAATMSGGVADLQSVLSFLT 61
Query: 76 YFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQ-TGMIVGGWDKYEGGKIYGVPLGGT 134
H++ I+ +P + N + L+ + ++ ++ I+GG D+ EG +Y V GT
Sbjct: 62 LRAHEYKIEYKRPIPISALVNYMSLILFYSRPYIYIVHSIIGGVDEEEGAVLYMVDWLGT 121
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
+ ++ + GSGS Y G + ++E MT E+A
Sbjct: 122 VTKEKYIATGSGSPYAKGALEVGYREDMTLEDA 154
>sp|A0B5B1|PSB_METTP Proteasome subunit beta OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=psmB PE=3 SV=1
Length = 207
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 86/157 (54%), Gaps = 3/157 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ +GGVVL ++SR + G ++A+R + KI Q+ D V L +G D+Q + +
Sbjct: 7 GTTTVGIVCDGGVVLASESRATMGSFIASRTAKKIYQIDDLVGLTTAGVVGDAQALVRMI 66
Query: 75 RYFLHQHTIQLGQPATVKVAANLV-RLLSYNNKNFLQTGMIVGGWDKYEGGKIYGV-PLG 132
+ + +Q G+P T+K +L+ +LS ++VGG DK G KI+ + LG
Sbjct: 67 QAEARLYRMQRGEPLTIKAITSLLSNILSARRYFPFLVQLVVGGVDKM-GPKIFSLDALG 125
Query: 133 GTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEV 169
G I E GSGS YG + +K G++ ++ V
Sbjct: 126 GQIEEHDIVSTGSGSPIAYGVLESLYKPGLSIQDGSV 162
>sp|A1RTI7|PSB2_PYRIL Proteasome subunit beta 2 OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=psmB2 PE=3 SV=1
Length = 200
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Query: 16 TTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVR 75
TT +G+ GVVL D R + G Y+A++ +KI ++ D+V SG AD Q++ ++
Sbjct: 2 TTTVGIAVKEGVVLATDKRVTAGYYIAHKQGEKIWKIDDHVAATMSGGVADLQSLLSFLT 61
Query: 76 YFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFL-QTGMIVGGWDKYEGGKIYGVPLGGT 134
++ I+ +P ++ N V L+ + ++ ++ I+GG D+ EG +Y V GT
Sbjct: 62 LRAREYKIEYKRPIPIRALVNYVSLILFYSRPYIYLVHSIIGGVDREEGAVLYMVDWLGT 121
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
+ + + GSGS Y G + ++E M+ E+A
Sbjct: 122 VTRERYIATGSGSPYAKGALEVGYREDMSLEDA 154
>sp|D3RX66|PSB_FERPA Proteasome subunit beta OS=Ferroglobus placidus (strain DSM 10642 /
AEDII12DO) GN=psmB PE=3 SV=1
Length = 210
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 86/155 (55%), Gaps = 3/155 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ GVVL + R + G ++A+R + KI ++TD + + +GS D+Q ++ +
Sbjct: 9 GTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYKITDRIAMTTAGSVGDAQFLARLI 68
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGV-PLG 132
+ + +TI+ + TVK A LV L + + F +++GG DK G KIY + P+G
Sbjct: 69 KVETNLYTIRKEEEPTVKAVATLVSNLLNSVRYFPYLVQLLIGGVDK-TGAKIYSIDPIG 127
Query: 133 GTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
G I E GSGS YG + +++ + +EA
Sbjct: 128 GAIEEIDIVATGSGSPMAYGVLEDNYRKDINVDEA 162
>sp|P40306|PSB10_HUMAN Proteasome subunit beta type-10 OS=Homo sapiens GN=PSMB10 PE=1 SV=1
Length = 273
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 1 MDLKMEDFNAPHS--MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYL 58
++ + PH+ GTTI G+ + GV+LGAD+R + VA+++ +KI + +Y
Sbjct: 23 LERVLPGLKVPHARKTGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYC 82
Query: 59 CRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 118
C +G AAD++ + V + H + G+ V ++R + + + +IVGG
Sbjct: 83 CGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGV 142
Query: 119 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
D G ++YGV G+ PF GSG + ++ MT E A+
Sbjct: 143 D-LTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQ 191
>sp|A8M8R5|PSB2_CALMQ Proteasome subunit beta 2 OS=Caldivirga maquilingensis (strain ATCC
700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=psmB2 PE=3
SV=1
Length = 200
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Query: 14 MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDY 73
M T +G+ GVVL A+ R S G Y+ +++ K+ +T+ + L SG AD QT++
Sbjct: 8 MTGTTVGIKAKDGVVLAAEKRVSYGFYLMSKSGKKVYPITNRIGLASSGILADIQTITKV 67
Query: 74 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNK--NFLQTGMIVGGWDKYEGGKIYGVPL 131
+R + I++ +P +V+ AA L+ ++ + NK ++ M VGG D+ EG K++ +
Sbjct: 68 IRANIANMEIEMKRPVSVRAAAKLLSIMLFQNKYMPYIAETM-VGGIDE-EGPKLFILDS 125
Query: 132 GGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 168
G++IE FA G+G+ G + + +T +EA+
Sbjct: 126 WGSLIEDDFAALGNGARTAIGLIETGYSSSITVKEAK 162
>sp|B1YA36|PSB1_PYRNV Proteasome subunit beta 1 OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=psmB1 PE=3 SV=1
Length = 201
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Query: 16 TTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVR 75
TT +G+ GVVL D R + G Y+A++ +KI ++ D+V SG AD Q+V ++
Sbjct: 2 TTTVGIAVREGVVLATDKRVTAGYYIAHKQGEKIWKIDDHVAATMSGGVADLQSVLSFLT 61
Query: 76 YFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQ-TGMIVGGWDKYEGGKIYGVPLGGT 134
++ ++ +P ++ N V L+ + ++ ++ I+GG D EG +Y GT
Sbjct: 62 LRAREYKMEYKRPIPIRALVNYVSLILFYSRPYIYIVHSIIGGVDDEEGAVLYMADWLGT 121
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
+ ++ + GSGS Y G + ++E M+ E+A
Sbjct: 122 VTKERYIATGSGSPYAKGALEVGYREDMSLEDA 154
>sp|Q4JAA8|PSB2_SULAC Proteasome subunit beta 2 OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=psmB2 PE=3 SV=1
Length = 203
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ GVVL AD R S G YVA++ K+ +TDN+ + +GS AD Q + + +
Sbjct: 10 GTTTVGIKVKDGVVLAADRRASAGYYVAHKYVRKVLYVTDNIGITTAGSVADLQFIYEAL 69
Query: 75 RYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
+Y H+++I P TVK +A L +LS + +++GG D + ++Y + G
Sbjct: 70 KYIYHRNSITGEGPITVKGIATWLANVLSSSKYFPYLVQILIGGVD--DQPRLYNLDYLG 127
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
I E+ + GSGS G + +K M+ +EA
Sbjct: 128 DITEEEYTATGSGSPEALGVLEDNYKPEMSLDEA 161
>sp|Q9YER0|PSB2_AERPE Proteasome subunit beta 2 OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=psmB2 PE=3
SV=2
Length = 219
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ + V+L AD R + G +A+R KI L++ V + SG AD+Q +SD +
Sbjct: 25 GTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDVL 84
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGG 133
R + + + +V+ A+L+ + +++K F +IVGG+D ++Y + L G
Sbjct: 85 REEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGGYDTQP--RLYTLDLFG 142
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
+I E + GSGS YG ++ ++E ++ EEA
Sbjct: 143 SITEDKYTATGSGSPIAYGVLEERYREDLSVEEA 176
>sp|C3NE98|PSB1_SULIY Proteasome subunit beta 1 OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=psmB1 PE=3 SV=1
Length = 211
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ N GVVL AD R S G +VAN+ K+ +TD + + +GS AD Q + D +
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 75 RYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
+ H ++I P ++K +A L +LS +++GG+D + +++ + G
Sbjct: 77 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYD--DQPRLFNLDYLG 134
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
I E+ + GSGS G + + MT +EA
Sbjct: 135 DITEENYVATGSGSPVAMGVLEDEYNPKMTLDEA 168
>sp|C3MVD5|PSB1_SULIM Proteasome subunit beta 1 OS=Sulfolobus islandicus (strain M.14.25
/ Kamchatka #1) GN=psmB1 PE=3 SV=1
Length = 211
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ N GVVL AD R S G +VAN+ K+ +TD + + +GS AD Q + D +
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 75 RYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
+ H ++I P ++K +A L +LS +++GG+D + +++ + G
Sbjct: 77 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYD--DQPRLFNLDYLG 134
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
I E+ + GSGS G + + MT +EA
Sbjct: 135 DITEENYVATGSGSPVAMGVLEDEYNPKMTLDEA 168
>sp|C3MQ16|PSB1_SULIL Proteasome subunit beta 1 OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmB1 PE=3 SV=1
Length = 211
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ N GVVL AD R S G +VAN+ K+ +TD + + +GS AD Q + D +
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 75 RYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
+ H ++I P ++K +A L +LS +++GG+D + +++ + G
Sbjct: 77 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYD--DQPRLFNLDYLG 134
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
I E+ + GSGS G + + MT +EA
Sbjct: 135 DITEENYVATGSGSPVAMGVLEDEYNPKMTLDEA 168
>sp|C4KHB0|PSB1_SULIK Proteasome subunit beta 1 OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=psmB1 PE=3 SV=1
Length = 211
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ N GVVL AD R S G +VAN+ K+ +TD + + +GS AD Q + D +
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 75 RYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
+ H ++I P ++K +A L +LS +++GG+D + +++ + G
Sbjct: 77 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYD--DQPRLFNLDYLG 134
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
I E+ + GSGS G + + MT +EA
Sbjct: 135 DITEENYVATGSGSPVAMGVLEDEYNPKMTLDEA 168
>sp|D2PK63|PSB1_SULID Proteasome subunit beta 1 OS=Sulfolobus islandicus (strain L.D.8.5
/ Lassen #2) GN=psmB1 PE=3 SV=1
Length = 211
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ N GVVL AD R S G +VAN+ K+ +TD + + +GS AD Q + D +
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 75 RYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
+ H ++I P ++K +A L +LS +++GG+D + +++ + G
Sbjct: 77 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYD--DQPRLFNLDYLG 134
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
I E+ + GSGS G + + MT +EA
Sbjct: 135 DITEENYVATGSGSPVAMGVLEDEYNPKMTLDEA 168
>sp|C3N5N4|PSB1_SULIA Proteasome subunit beta 1 OS=Sulfolobus islandicus (strain M.16.27)
GN=psmB1 PE=3 SV=1
Length = 211
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ N GVVL AD R S G +VAN+ K+ +TD + + +GS AD Q + D +
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 75 RYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
+ H ++I P ++K +A L +LS +++GG+D + +++ + G
Sbjct: 77 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYD--DQPRLFNLDYLG 134
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
I E+ + GSGS G + + MT +EA
Sbjct: 135 DITEENYVATGSGSPVAMGVLEDEYNPKMTLDEA 168
>sp|A4WH05|PSB1_PYRAR Proteasome subunit beta 1 OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=psmB1 PE=3 SV=1
Length = 202
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 16 TTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVR 75
TT +G+ GVVL D R + G Y+A++ +K+ ++ D+V SG AD Q + ++
Sbjct: 2 TTTVGIVVKDGVVLATDKRVTAGYYIAHKKGEKLWKIDDHVAATMSGGVADLQNILSFLT 61
Query: 76 YFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQ-TGMIVGGWDKYEGGKIYGVPLGGT 134
++ Q +P ++ N + L+ + ++ ++ I+GG D+ EG +Y V GT
Sbjct: 62 VRAREYKTQFRRPIPIRALVNYMSLILFYSRPYVYVVHSIIGGVDEEEGAVMYMVDWLGT 121
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
+ ++ + GSGS Y G + ++ +T EEA
Sbjct: 122 VTKEKYVATGSGSPYAKGVLEVGYRGDLTVEEA 154
>sp|Q9UXF3|PSB2_SULSO Proteasome subunit beta 2 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=psmB2 PE=3 SV=2
Length = 208
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ N GV+L AD R S G +VAN+ K+ +TD + + +GS AD Q + D +
Sbjct: 14 GTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 73
Query: 75 RYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
+ H ++I P ++K +A L +LS +++GG+D + +++ + G
Sbjct: 74 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYD--DQPRLFNLDYLG 131
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 167
I E+ + GSGS G + + MT +EA
Sbjct: 132 DITEENYVATGSGSPVAMGVLEDEYNPKMTLDEA 165
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,038,267
Number of Sequences: 539616
Number of extensions: 2808473
Number of successful extensions: 8127
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 218
Number of HSP's that attempted gapping in prelim test: 7479
Number of HSP's gapped (non-prelim): 566
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)