Query 030792
Match_columns 171
No_of_seqs 23 out of 25
Neff 2.2
Searched_HMMs 29240
Date Mon Mar 25 06:55:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030792.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030792hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h2b_A SAM-dependent methyltra 99.1 1.4E-10 4.8E-15 83.9 6.4 134 2-142 43-177 (203)
2 3e23_A Uncharacterized protein 99.0 1.6E-09 5.3E-14 79.1 7.5 130 2-141 45-176 (211)
3 3lcc_A Putative methyl chlorid 99.0 1.9E-09 6.5E-14 80.1 8.0 126 3-141 69-201 (235)
4 2ex4_A Adrenal gland protein A 98.9 1.5E-09 5.1E-14 81.2 5.8 134 2-142 81-220 (241)
5 3cgg_A SAM-dependent methyltra 98.9 5.9E-09 2E-13 73.0 8.4 120 2-141 48-169 (195)
6 3jwg_A HEN1, methyltransferase 98.9 4.5E-09 1.5E-13 77.1 7.9 98 2-102 31-139 (219)
7 2p8j_A S-adenosylmethionine-de 98.9 9.8E-10 3.4E-14 79.2 3.9 141 2-143 25-179 (209)
8 1xtp_A LMAJ004091AAA; SGPP, st 98.9 1.5E-09 5E-14 80.5 4.6 135 2-142 95-233 (254)
9 3hnr_A Probable methyltransfer 98.9 1.7E-08 5.7E-13 73.6 9.9 134 2-140 47-194 (220)
10 3jwh_A HEN1; methyltransferase 98.9 6.2E-09 2.1E-13 76.5 7.4 99 2-103 31-141 (217)
11 3ujc_A Phosphoethanolamine N-m 98.8 1.1E-09 3.8E-14 81.1 3.0 135 2-141 57-200 (266)
12 3dli_A Methyltransferase; PSI- 98.8 1.6E-08 5.5E-13 75.6 9.0 132 2-140 43-177 (240)
13 3dlc_A Putative S-adenosyl-L-m 98.8 1.1E-08 3.6E-13 73.2 7.5 96 3-103 46-148 (219)
14 3sm3_A SAM-dependent methyltra 98.7 2.5E-08 8.6E-13 72.3 7.0 98 2-103 32-141 (235)
15 3f4k_A Putative methyltransfer 98.7 6E-08 2E-12 72.2 9.1 131 3-140 49-189 (257)
16 3bus_A REBM, methyltransferase 98.7 6.8E-08 2.3E-12 72.7 8.8 135 2-141 63-210 (273)
17 3ou2_A SAM-dependent methyltra 98.7 4.4E-08 1.5E-12 70.5 7.3 130 2-140 48-198 (218)
18 2o57_A Putative sarcosine dime 98.7 6.2E-08 2.1E-12 74.3 8.4 134 2-141 84-228 (297)
19 3cc8_A Putative methyltransfer 98.7 7.8E-08 2.7E-12 69.2 8.4 131 2-140 34-178 (230)
20 2yqz_A Hypothetical protein TT 98.7 1.6E-08 5.3E-13 75.1 4.7 132 2-140 41-189 (263)
21 1xxl_A YCGJ protein; structura 98.7 1.9E-07 6.5E-12 70.2 10.4 133 2-140 23-167 (239)
22 3l8d_A Methyltransferase; stru 98.7 4.4E-08 1.5E-12 72.1 6.7 134 2-141 55-194 (242)
23 1vl5_A Unknown conserved prote 98.7 1.8E-07 6E-12 70.5 10.0 133 2-140 39-183 (260)
24 1kpg_A CFA synthase;, cyclopro 98.7 1.1E-07 3.9E-12 72.5 9.0 134 2-141 66-222 (287)
25 3dtn_A Putative methyltransfer 98.6 1.9E-07 6.4E-12 68.8 9.2 98 2-103 46-148 (234)
26 3g5l_A Putative S-adenosylmeth 98.6 2.1E-08 7.3E-13 75.0 4.1 96 2-102 46-144 (253)
27 3dh0_A SAM dependent methyltra 98.6 1.1E-07 3.8E-12 69.2 7.7 130 2-141 39-175 (219)
28 4htf_A S-adenosylmethionine-de 98.6 1.5E-07 5E-12 72.0 8.5 132 3-140 71-225 (285)
29 3ccf_A Cyclopropane-fatty-acyl 98.6 2.1E-07 7.1E-12 71.2 9.1 133 2-141 59-204 (279)
30 1ri5_A MRNA capping enzyme; me 98.6 2.1E-07 7.2E-12 70.2 8.5 99 2-103 66-174 (298)
31 3ege_A Putative methyltransfer 98.6 6.8E-08 2.3E-12 73.7 5.8 129 2-140 36-171 (261)
32 2fk8_A Methoxy mycolic acid sy 98.6 3.4E-07 1.2E-11 71.3 9.7 135 2-142 92-249 (318)
33 1nkv_A Hypothetical protein YJ 98.6 2.9E-07 1E-11 68.4 8.8 97 2-102 38-139 (256)
34 2p7i_A Hypothetical protein; p 98.6 5.4E-07 1.8E-11 65.3 9.8 95 2-103 44-141 (250)
35 3kkz_A Uncharacterized protein 98.6 3.1E-07 1E-11 69.6 8.7 132 2-140 48-189 (267)
36 3g2m_A PCZA361.24; SAM-depende 98.5 8.5E-08 2.9E-12 74.3 5.6 98 3-105 85-191 (299)
37 3bkw_A MLL3908 protein, S-aden 98.5 1.4E-07 5E-12 69.1 6.2 96 2-102 45-143 (243)
38 2xvm_A Tellurite resistance pr 98.5 2.9E-07 1E-11 65.3 7.3 97 2-103 34-136 (199)
39 3vc1_A Geranyl diphosphate 2-C 98.5 3.2E-07 1.1E-11 72.0 8.1 134 2-140 119-262 (312)
40 3bkx_A SAM-dependent methyltra 98.5 1.5E-06 5.1E-11 65.4 10.9 137 2-141 45-213 (275)
41 1vlm_A SAM-dependent methyltra 98.5 6.2E-07 2.1E-11 66.3 8.5 128 2-141 49-182 (219)
42 2i62_A Nicotinamide N-methyltr 98.5 2.2E-07 7.4E-12 69.0 5.8 132 2-141 58-233 (265)
43 3ofk_A Nodulation protein S; N 98.5 3.1E-07 1E-11 66.9 6.4 100 2-106 53-156 (216)
44 3hem_A Cyclopropane-fatty-acyl 98.5 9.3E-07 3.2E-11 68.6 9.4 133 3-141 75-237 (302)
45 2gs9_A Hypothetical protein TT 98.5 6.8E-07 2.3E-11 64.9 8.0 126 2-135 38-170 (211)
46 2p35_A Trans-aconitate 2-methy 98.4 1E-06 3.4E-11 65.4 8.4 132 2-140 35-183 (259)
47 2pxx_A Uncharacterized protein 98.4 7.9E-07 2.7E-11 63.5 6.7 99 2-103 44-159 (215)
48 2kw5_A SLR1183 protein; struct 98.4 1.8E-06 6E-11 62.3 8.3 95 3-103 32-131 (202)
49 1ve3_A Hypothetical protein PH 98.4 6E-07 2.1E-11 65.1 5.7 99 2-102 40-141 (227)
50 3i9f_A Putative type 11 methyl 98.4 6.3E-07 2.2E-11 63.0 5.6 122 2-141 19-142 (170)
51 3e8s_A Putative SAM dependent 98.3 4E-07 1.4E-11 65.3 4.6 133 2-142 54-204 (227)
52 2avn_A Ubiquinone/menaquinone 98.3 5.1E-07 1.8E-11 68.6 5.3 95 2-102 56-151 (260)
53 3m70_A Tellurite resistance pr 98.3 8.1E-07 2.8E-11 68.0 6.2 100 2-104 122-224 (286)
54 3mgg_A Methyltransferase; NYSG 98.3 1.9E-06 6.6E-11 65.1 8.2 96 2-102 39-141 (276)
55 1y8c_A S-adenosylmethionine-de 98.3 1.1E-06 3.9E-11 63.9 6.5 95 2-101 39-140 (246)
56 3ocj_A Putative exported prote 98.3 2.8E-06 9.7E-11 66.4 9.1 136 2-141 120-285 (305)
57 3d2l_A SAM-dependent methyltra 98.3 8.4E-07 2.9E-11 65.0 5.6 96 2-101 35-135 (243)
58 2r3s_A Uncharacterized protein 98.3 2.6E-06 9E-11 66.3 8.4 136 2-142 167-318 (335)
59 3pfg_A N-methyltransferase; N, 98.3 1.2E-06 4.1E-11 66.0 6.3 96 2-102 52-150 (263)
60 2yxd_A Probable cobalt-precorr 98.3 1.3E-06 4.4E-11 60.7 5.6 92 2-103 37-131 (183)
61 3g5t_A Trans-aconitate 3-methy 98.3 9.7E-07 3.3E-11 68.4 5.3 96 2-101 38-147 (299)
62 2zfu_A Nucleomethylin, cerebra 98.2 2.7E-06 9.1E-11 62.1 6.8 105 2-142 69-174 (215)
63 4gek_A TRNA (CMO5U34)-methyltr 98.2 3.8E-06 1.3E-10 66.6 7.8 97 3-102 73-177 (261)
64 3bxo_A N,N-dimethyltransferase 98.2 3E-06 1E-10 61.9 6.5 96 2-102 42-140 (239)
65 4hg2_A Methyltransferase type 98.2 8.4E-07 2.9E-11 70.6 3.9 93 3-104 42-136 (257)
66 1pjz_A Thiopurine S-methyltran 98.2 2.4E-06 8E-11 63.8 6.0 124 3-140 25-169 (203)
67 3thr_A Glycine N-methyltransfe 98.2 1.7E-06 5.9E-11 65.9 5.0 103 2-106 59-177 (293)
68 3hm2_A Precorrin-6Y C5,15-meth 98.2 3.5E-06 1.2E-10 59.0 6.2 97 2-104 27-128 (178)
69 2ip2_A Probable phenazine-spec 98.2 1.1E-05 3.9E-10 63.3 9.5 137 3-142 170-317 (334)
70 4fsd_A Arsenic methyltransfera 98.2 4.4E-06 1.5E-10 68.5 7.4 136 3-141 86-245 (383)
71 3bzb_A Uncharacterized protein 98.2 4.6E-06 1.6E-10 65.6 7.2 135 2-138 81-248 (281)
72 3gu3_A Methyltransferase; alph 98.1 6.4E-06 2.2E-10 63.7 7.7 99 2-106 24-128 (284)
73 1qzz_A RDMB, aclacinomycin-10- 98.1 4.5E-06 1.5E-10 66.4 6.9 132 2-141 184-333 (374)
74 3htx_A HEN1; HEN1, small RNA m 98.1 4.2E-06 1.4E-10 81.0 7.9 104 2-107 723-837 (950)
75 1tw3_A COMT, carminomycin 4-O- 98.1 8.9E-06 3.1E-10 64.6 8.4 135 2-141 185-333 (360)
76 3bgv_A MRNA CAP guanine-N7 met 98.1 4.4E-06 1.5E-10 65.3 6.5 100 3-106 37-157 (313)
77 3iv6_A Putative Zn-dependent a 98.1 7.9E-06 2.7E-10 66.4 7.9 147 2-151 47-210 (261)
78 4e2x_A TCAB9; kijanose, tetron 98.1 4.4E-07 1.5E-11 73.8 0.3 129 3-141 110-247 (416)
79 3mcz_A O-methyltransferase; ad 98.1 2E-05 6.7E-10 62.4 9.7 139 2-143 181-335 (352)
80 3m33_A Uncharacterized protein 98.1 1.1E-05 3.6E-10 60.4 7.7 88 2-100 50-139 (226)
81 3ggd_A SAM-dependent methyltra 98.1 5.8E-06 2E-10 61.5 5.7 98 2-103 58-163 (245)
82 2g72_A Phenylethanolamine N-me 98.1 6E-06 2.1E-10 63.6 5.8 134 2-142 73-251 (289)
83 2qe6_A Uncharacterized protein 98.0 1.6E-05 5.4E-10 63.1 8.1 136 2-143 79-238 (274)
84 1yzh_A TRNA (guanine-N(7)-)-me 98.0 4E-05 1.4E-09 56.6 9.7 114 2-119 43-173 (214)
85 1ej0_A FTSJ; methyltransferase 98.0 6.2E-06 2.1E-10 56.0 4.6 97 3-108 25-141 (180)
86 1wzn_A SAM-dependent methyltra 98.0 8E-06 2.8E-10 60.7 5.5 97 2-101 43-143 (252)
87 3grz_A L11 mtase, ribosomal pr 98.0 1.5E-05 5E-10 58.0 6.4 98 2-107 62-163 (205)
88 3dp7_A SAM-dependent methyltra 97.9 8.9E-05 3.1E-09 60.1 11.0 135 2-142 181-337 (363)
89 3i53_A O-methyltransferase; CO 97.9 4.9E-05 1.7E-09 60.1 9.0 135 2-142 171-316 (332)
90 2a14_A Indolethylamine N-methy 97.9 9.8E-06 3.4E-10 62.4 4.8 133 2-141 57-232 (263)
91 2aot_A HMT, histamine N-methyl 97.9 2.5E-05 8.7E-10 60.6 7.0 134 3-141 55-215 (292)
92 1x19_A CRTF-related protein; m 97.9 0.0002 6.9E-09 57.3 12.3 134 2-141 192-342 (359)
93 1ne2_A Hypothetical protein TA 97.9 2.4E-05 8.1E-10 56.8 6.1 98 2-107 53-150 (200)
94 1fp2_A Isoflavone O-methyltran 97.9 3.5E-05 1.2E-09 61.7 7.6 132 2-142 190-336 (352)
95 1dus_A MJ0882; hypothetical pr 97.9 7.3E-05 2.5E-09 52.1 8.1 102 2-107 54-161 (194)
96 3lst_A CALO1 methyltransferase 97.9 2.7E-05 9.3E-10 62.5 6.6 136 2-142 186-331 (348)
97 3mti_A RRNA methylase; SAM-dep 97.8 3.1E-05 1.1E-09 55.2 6.0 101 2-108 24-140 (185)
98 3g07_A 7SK snRNA methylphospha 97.7 2.2E-05 7.5E-10 61.7 4.2 162 2-167 48-286 (292)
99 2gb4_A Thiopurine S-methyltran 97.7 2.2E-05 7.7E-10 61.8 4.1 97 3-103 71-191 (252)
100 3p9n_A Possible methyltransfer 97.7 5.8E-05 2E-09 54.5 5.6 101 2-103 46-153 (189)
101 1p91_A Ribosomal RNA large sub 97.7 5.7E-05 1.9E-09 57.0 5.5 89 3-103 88-178 (269)
102 3gwz_A MMCR; methyltransferase 97.6 0.00044 1.5E-08 56.2 10.5 135 2-142 204-351 (369)
103 3q87_B N6 adenine specific DNA 97.6 8.4E-05 2.9E-09 53.9 5.7 92 3-104 26-124 (170)
104 1vbf_A 231AA long hypothetical 97.6 6.8E-05 2.3E-09 55.2 5.1 92 2-105 72-167 (231)
105 3lbf_A Protein-L-isoaspartate 97.6 0.00013 4.4E-09 53.0 6.2 90 2-103 79-174 (210)
106 1l3i_A Precorrin-6Y methyltran 97.6 7.6E-05 2.6E-09 51.9 4.5 96 2-104 35-135 (192)
107 3q7e_A Protein arginine N-meth 97.6 0.0001 3.5E-09 60.1 6.0 95 2-100 68-170 (349)
108 2nxc_A L11 mtase, ribosomal pr 97.6 0.00011 3.7E-09 57.0 5.8 94 2-106 122-221 (254)
109 2yxe_A Protein-L-isoaspartate 97.6 8.4E-05 2.9E-09 54.1 4.7 93 2-105 79-179 (215)
110 3eey_A Putative rRNA methylase 97.5 0.00019 6.5E-09 51.6 6.4 105 3-107 25-143 (197)
111 1zx0_A Guanidinoacetate N-meth 97.5 9.7E-05 3.3E-09 55.3 5.0 101 2-105 62-172 (236)
112 2ipx_A RRNA 2'-O-methyltransfe 97.5 9.2E-05 3.1E-09 55.3 4.6 95 3-102 80-181 (233)
113 1zg3_A Isoflavanone 4'-O-methy 97.5 0.00011 3.8E-09 58.9 4.9 129 2-141 195-341 (358)
114 3e05_A Precorrin-6Y C5,15-meth 97.5 0.00047 1.6E-08 50.1 7.7 98 2-105 42-144 (204)
115 2y1w_A Histone-arginine methyl 97.4 0.00036 1.2E-08 56.8 7.5 95 2-101 52-153 (348)
116 2fpo_A Methylase YHHF; structu 97.4 0.00011 3.9E-09 54.6 4.1 104 2-108 56-165 (202)
117 1jg1_A PIMT;, protein-L-isoasp 97.4 0.00028 9.5E-09 52.9 6.2 89 2-103 93-189 (235)
118 1fp1_D Isoliquiritigenin 2'-O- 97.4 0.00015 5.2E-09 58.6 5.0 131 2-141 211-354 (372)
119 2ld4_A Anamorsin; methyltransf 97.4 0.00039 1.3E-08 49.5 6.5 81 48-139 44-128 (176)
120 1fbn_A MJ fibrillarin homologu 97.4 0.0001 3.4E-09 55.4 3.6 94 3-102 77-177 (230)
121 3mq2_A 16S rRNA methyltransfer 97.4 0.00023 7.7E-09 52.1 5.3 98 2-101 29-138 (218)
122 2vdw_A Vaccinia virus capping 97.4 0.0002 6.9E-09 57.8 5.1 102 2-103 50-169 (302)
123 2ift_A Putative methylase HI07 97.4 0.00022 7.6E-09 53.0 4.9 102 3-107 56-167 (201)
124 4dzr_A Protein-(glutamine-N5) 97.3 9E-05 3.1E-09 52.6 2.4 109 2-112 32-173 (215)
125 3opn_A Putative hemolysin; str 97.3 8.7E-05 3E-09 58.0 2.4 127 2-140 39-177 (232)
126 2pjd_A Ribosomal RNA small sub 97.3 0.00023 7.7E-09 57.5 4.7 99 2-103 198-303 (343)
127 2esr_A Methyltransferase; stru 97.3 9.9E-05 3.4E-09 52.2 2.3 102 2-106 33-141 (177)
128 3dmg_A Probable ribosomal RNA 97.3 0.00034 1.2E-08 58.9 5.9 102 3-106 236-343 (381)
129 3reo_A (ISO)eugenol O-methyltr 97.3 0.00084 2.9E-08 54.8 8.0 133 2-142 205-350 (368)
130 1wy7_A Hypothetical protein PH 97.3 0.00089 3E-08 48.4 7.0 87 2-94 51-141 (207)
131 1g6q_1 HnRNP arginine N-methyl 97.2 0.00081 2.8E-08 54.2 7.3 95 2-100 40-142 (328)
132 2fyt_A Protein arginine N-meth 97.2 0.00087 3E-08 54.6 7.4 95 2-100 66-168 (340)
133 1jsx_A Glucose-inhibited divis 97.2 0.00077 2.6E-08 48.6 6.1 106 2-116 67-177 (207)
134 1mjf_A Spermidine synthase; sp 97.2 0.00018 6.3E-09 57.0 3.1 101 2-106 77-197 (281)
135 1yb2_A Hypothetical protein TA 97.2 0.00044 1.5E-08 53.5 5.1 96 2-106 112-214 (275)
136 1i9g_A Hypothetical protein RV 97.2 0.00054 1.9E-08 51.9 5.3 93 3-103 102-203 (280)
137 3gdh_A Trimethylguanosine synt 97.2 0.00039 1.3E-08 51.6 4.3 95 2-101 80-179 (241)
138 3r0q_C Probable protein argini 97.1 0.00083 2.9E-08 55.4 6.6 95 2-102 65-168 (376)
139 3adn_A Spermidine synthase; am 97.1 0.00066 2.3E-08 55.1 5.8 99 2-103 85-198 (294)
140 3njr_A Precorrin-6Y methylase; 97.1 0.0018 6.3E-08 48.4 7.7 94 3-105 58-156 (204)
141 3mb5_A SAM-dependent methyltra 97.1 0.0011 3.9E-08 49.5 6.4 93 2-103 95-194 (255)
142 2b3t_A Protein methyltransfera 97.1 0.0019 6.4E-08 49.9 7.6 99 2-102 111-237 (276)
143 2plw_A Ribosomal RNA methyltra 97.1 0.0011 3.8E-08 47.6 5.8 97 2-107 24-158 (201)
144 1ws6_A Methyltransferase; stru 97.0 0.00019 6.6E-09 49.5 1.7 102 2-108 43-152 (171)
145 2yvl_A TRMI protein, hypotheti 97.0 0.0037 1.3E-07 46.0 8.7 92 2-104 93-191 (248)
146 1nt2_A Fibrillarin-like PRE-rR 97.0 0.00063 2.1E-08 51.6 4.6 93 3-102 60-160 (210)
147 2pbf_A Protein-L-isoaspartate 97.0 0.00049 1.7E-08 50.7 3.8 96 2-105 82-195 (227)
148 2fca_A TRNA (guanine-N(7)-)-me 97.0 0.0017 5.8E-08 48.7 6.4 115 3-119 41-170 (213)
149 2pwy_A TRNA (adenine-N(1)-)-me 97.0 0.0013 4.4E-08 48.8 5.7 94 2-103 98-198 (258)
150 1g8a_A Fibrillarin-like PRE-rR 97.0 0.00053 1.8E-08 50.6 3.5 95 3-102 76-177 (227)
151 2fhp_A Methylase, putative; al 97.0 0.00052 1.8E-08 48.2 3.2 101 2-105 46-156 (187)
152 3p9c_A Caffeic acid O-methyltr 96.9 0.003 1E-07 51.6 8.0 133 2-142 203-348 (364)
153 2bm8_A Cephalosporin hydroxyla 96.9 0.001 3.4E-08 51.4 4.6 94 2-104 83-188 (236)
154 3lpm_A Putative methyltransfer 96.9 0.0027 9.3E-08 48.5 6.9 107 2-108 51-181 (259)
155 3hp7_A Hemolysin, putative; st 96.9 0.0017 5.9E-08 54.0 6.3 126 2-140 87-225 (291)
156 1uwv_A 23S rRNA (uracil-5-)-me 96.9 0.002 6.7E-08 54.3 6.6 106 3-118 289-404 (433)
157 1xdz_A Methyltransferase GIDB; 96.8 0.0017 5.7E-08 49.0 5.4 94 2-102 72-173 (240)
158 2qm3_A Predicted methyltransfe 96.8 0.0044 1.5E-07 50.8 8.3 96 2-104 174-279 (373)
159 2o07_A Spermidine synthase; st 96.8 0.0011 3.6E-08 53.9 4.6 102 2-106 97-213 (304)
160 1r18_A Protein-L-isoaspartate( 96.8 0.0015 5.2E-08 48.5 5.0 93 3-104 87-195 (227)
161 2pt6_A Spermidine synthase; tr 96.8 0.0012 4E-08 54.0 4.6 102 2-106 118-234 (321)
162 1inl_A Spermidine synthase; be 96.7 0.0016 5.6E-08 52.2 5.0 101 2-105 92-208 (296)
163 2b25_A Hypothetical protein; s 96.7 0.0019 6.6E-08 51.3 5.3 108 2-116 107-233 (336)
164 2b2c_A Spermidine synthase; be 96.7 0.0012 4E-08 54.3 4.1 102 2-106 110-226 (314)
165 1o9g_A RRNA methyltransferase; 96.7 0.0032 1.1E-07 47.6 6.1 103 3-105 54-216 (250)
166 3u81_A Catechol O-methyltransf 96.7 0.0022 7.4E-08 47.6 4.9 100 2-103 60-170 (221)
167 1i1n_A Protein-L-isoaspartate 96.7 0.0026 8.9E-08 46.7 5.3 95 2-105 79-184 (226)
168 3evz_A Methyltransferase; NYSG 96.7 0.0045 1.6E-07 45.4 6.4 71 2-72 57-130 (230)
169 2vdv_E TRNA (guanine-N(7)-)-me 96.7 0.0035 1.2E-07 47.5 6.0 118 3-120 52-191 (246)
170 4dcm_A Ribosomal RNA large sub 96.6 0.0031 1.1E-07 52.7 6.2 98 2-104 224-335 (375)
171 1o54_A SAM-dependent O-methylt 96.6 0.004 1.4E-07 47.9 6.3 92 3-103 115-213 (277)
172 1u2z_A Histone-lysine N-methyl 96.6 0.0024 8.2E-08 55.8 5.6 98 2-102 244-358 (433)
173 3dxy_A TRNA (guanine-N(7)-)-me 96.5 0.0029 9.8E-08 48.4 4.8 100 3-105 37-152 (218)
174 1af7_A Chemotaxis receptor met 96.5 0.0064 2.2E-07 49.4 6.8 51 53-104 201-252 (274)
175 3b3j_A Histone-arginine methyl 96.5 0.004 1.4E-07 54.0 5.9 94 2-100 160-260 (480)
176 3orh_A Guanidinoacetate N-meth 96.5 0.0049 1.7E-07 47.1 5.7 99 2-103 62-170 (236)
177 2nyu_A Putative ribosomal RNA 96.4 0.0055 1.9E-07 43.5 5.6 99 2-108 24-150 (196)
178 1uir_A Polyamine aminopropyltr 96.4 0.0015 5.2E-08 52.8 2.8 98 2-102 79-194 (314)
179 1nv8_A HEMK protein; class I a 96.4 0.0099 3.4E-07 47.4 7.4 67 3-72 126-199 (284)
180 3tm4_A TRNA (guanine N2-)-meth 96.3 0.009 3.1E-07 49.2 6.9 100 2-105 219-332 (373)
181 3bwc_A Spermidine synthase; SA 96.3 0.0037 1.3E-07 50.1 4.3 98 2-103 97-210 (304)
182 1iy9_A Spermidine synthase; ro 96.3 0.0031 1.1E-07 50.0 3.8 99 2-103 77-189 (275)
183 3ckk_A TRNA (guanine-N(7)-)-me 96.2 0.0054 1.8E-07 47.5 4.9 113 3-119 49-185 (235)
184 3uwp_A Histone-lysine N-methyl 96.2 0.0045 1.5E-07 55.5 4.7 97 3-103 176-287 (438)
185 3ntv_A MW1564 protein; rossman 96.2 0.0071 2.4E-07 45.6 5.1 95 2-101 73-174 (232)
186 2i7c_A Spermidine synthase; tr 96.2 0.005 1.7E-07 48.9 4.4 99 2-103 80-192 (283)
187 2gpy_A O-methyltransferase; st 96.2 0.0061 2.1E-07 45.2 4.6 94 2-102 56-159 (233)
188 3fpf_A Mtnas, putative unchara 96.1 0.011 3.7E-07 49.8 6.6 96 2-107 124-226 (298)
189 3c3p_A Methyltransferase; NP_9 96.1 0.0075 2.6E-07 44.1 5.0 92 2-102 58-159 (210)
190 1sui_A Caffeoyl-COA O-methyltr 96.1 0.0043 1.5E-07 48.1 3.6 95 2-103 81-190 (247)
191 3tfw_A Putative O-methyltransf 96.0 0.011 3.9E-07 45.2 5.8 97 2-103 65-170 (248)
192 1xj5_A Spermidine synthase 1; 96.0 0.011 3.7E-07 49.0 5.9 101 2-105 122-238 (334)
193 3id6_C Fibrillarin-like rRNA/T 96.0 0.0083 2.8E-07 47.8 4.9 93 3-102 79-180 (232)
194 1dl5_A Protein-L-isoaspartate 95.9 0.018 6.2E-07 45.7 6.4 94 2-106 77-178 (317)
195 2frn_A Hypothetical protein PH 95.7 0.019 6.4E-07 45.1 6.0 94 2-103 127-225 (278)
196 2hnk_A SAM-dependent O-methylt 95.7 0.013 4.4E-07 44.0 4.6 94 2-102 62-180 (239)
197 3c3y_A Pfomt, O-methyltransfer 95.6 0.005 1.7E-07 47.0 2.2 95 2-102 72-180 (237)
198 3gru_A Dimethyladenosine trans 95.6 0.011 3.6E-07 48.8 4.1 80 2-85 52-133 (295)
199 2h1r_A Dimethyladenosine trans 95.5 0.022 7.5E-07 45.7 5.8 70 3-80 45-120 (299)
200 2ozv_A Hypothetical protein AT 95.4 0.018 6.2E-07 44.7 4.9 71 2-72 38-122 (260)
201 3a27_A TYW2, uncharacterized p 95.4 0.021 7.3E-07 44.8 5.2 97 2-106 121-222 (272)
202 1ixk_A Methyltransferase; open 95.4 0.031 1.1E-06 45.0 6.2 101 2-103 120-246 (315)
203 2wa2_A Non-structural protein 95.4 0.013 4.6E-07 47.2 4.1 98 2-107 84-198 (276)
204 3tr6_A O-methyltransferase; ce 95.3 0.013 4.4E-07 42.8 3.5 96 2-102 66-173 (225)
205 3dr5_A Putative O-methyltransf 95.3 0.011 3.8E-07 45.2 3.2 95 3-102 59-162 (221)
206 2cmg_A Spermidine synthase; tr 95.3 0.02 6.8E-07 45.6 4.7 95 2-108 74-177 (262)
207 3duw_A OMT, O-methyltransferas 95.3 0.022 7.4E-07 41.7 4.5 94 2-103 60-167 (223)
208 2yx1_A Hypothetical protein MJ 95.2 0.032 1.1E-06 45.3 5.9 90 3-104 198-292 (336)
209 1zq9_A Probable dimethyladenos 95.2 0.02 6.7E-07 45.5 4.5 62 3-71 31-99 (285)
210 1qam_A ERMC' methyltransferase 95.1 0.011 3.9E-07 45.8 2.8 77 3-84 33-112 (244)
211 3giw_A Protein of unknown func 94.9 0.025 8.4E-07 47.3 4.5 135 2-140 80-240 (277)
212 2jjq_A Uncharacterized RNA met 94.8 0.061 2.1E-06 45.9 6.7 101 2-115 292-399 (425)
213 3ftd_A Dimethyladenosine trans 94.7 0.038 1.3E-06 43.7 4.9 80 3-89 34-118 (249)
214 4a6d_A Hydroxyindole O-methylt 94.7 0.37 1.3E-05 39.1 10.8 136 2-142 181-329 (353)
215 3kr9_A SAM-dependent methyltra 94.6 0.089 3E-06 42.1 6.9 69 3-75 18-94 (225)
216 2oxt_A Nucleoside-2'-O-methylt 94.6 0.032 1.1E-06 44.6 4.3 98 2-107 76-190 (265)
217 3gnl_A Uncharacterized protein 94.6 0.076 2.6E-06 43.2 6.5 68 3-74 24-99 (244)
218 3fut_A Dimethyladenosine trans 94.6 0.028 9.4E-07 45.7 3.9 83 3-89 49-133 (271)
219 3r3h_A O-methyltransferase, SA 94.5 0.024 8.2E-07 43.8 3.1 101 2-107 62-176 (242)
220 1sqg_A SUN protein, FMU protei 94.3 0.054 1.8E-06 45.3 5.1 101 2-103 248-374 (429)
221 1yub_A Ermam, rRNA methyltrans 94.2 0.012 4.2E-07 44.9 1.0 66 3-73 32-100 (245)
222 2yxl_A PH0851 protein, 450AA l 94.2 0.13 4.5E-06 43.5 7.3 97 3-103 262-389 (450)
223 3g89_A Ribosomal RNA small sub 94.1 0.057 1.9E-06 42.1 4.6 96 2-104 82-186 (249)
224 2xyq_A Putative 2'-O-methyl tr 94.0 0.066 2.3E-06 44.1 5.0 88 3-104 66-172 (290)
225 3cbg_A O-methyltransferase; cy 93.9 0.075 2.6E-06 40.1 4.8 94 2-102 74-181 (232)
226 3frh_A 16S rRNA methylase; met 93.8 0.06 2.1E-06 45.2 4.5 100 2-107 107-208 (253)
227 2h00_A Methyltransferase 10 do 93.8 0.12 4.2E-06 38.7 5.7 70 3-72 68-147 (254)
228 3tqs_A Ribosomal RNA small sub 93.8 0.027 9.3E-07 45.0 2.3 82 2-89 31-119 (255)
229 3lcv_B Sisomicin-gentamicin re 93.8 0.1 3.5E-06 44.7 5.9 126 2-139 134-264 (281)
230 3lec_A NADB-rossmann superfami 93.3 0.19 6.6E-06 40.5 6.5 98 3-104 24-126 (230)
231 3p2e_A 16S rRNA methylase; met 93.3 0.21 7.2E-06 38.2 6.4 135 2-140 26-178 (225)
232 4azs_A Methyltransferase WBDD; 93.1 0.046 1.6E-06 47.6 2.8 116 3-122 69-198 (569)
233 3tma_A Methyltransferase; thum 93.1 0.22 7.4E-06 40.0 6.5 95 2-102 205-316 (354)
234 2avd_A Catechol-O-methyltransf 93.0 0.11 3.7E-06 38.0 4.3 95 2-103 71-179 (229)
235 3sso_A Methyltransferase; macr 93.0 0.033 1.1E-06 49.5 1.7 91 2-102 218-323 (419)
236 3dou_A Ribosomal RNA large sub 92.4 0.084 2.9E-06 39.4 3.0 33 2-35 27-59 (191)
237 3v97_A Ribosomal RNA large sub 92.3 0.12 4E-06 47.1 4.3 118 2-120 541-674 (703)
238 3m6w_A RRNA methylase; rRNA me 92.2 0.087 3E-06 46.3 3.3 97 3-102 104-228 (464)
239 3fzg_A 16S rRNA methylase; met 91.9 0.086 2.9E-06 43.0 2.7 118 2-133 51-174 (200)
240 4hc4_A Protein arginine N-meth 91.9 0.22 7.4E-06 42.6 5.3 92 2-101 85-187 (376)
241 3c0k_A UPF0064 protein YCCW; P 91.5 0.23 7.8E-06 40.9 4.9 106 2-108 222-344 (396)
242 2b78_A Hypothetical protein SM 91.5 0.18 6E-06 41.9 4.2 106 2-108 214-336 (385)
243 2r6z_A UPF0341 protein in RSP 90.7 0.13 4.4E-06 40.9 2.5 101 2-103 85-217 (258)
244 2frx_A Hypothetical protein YE 90.5 0.26 9E-06 42.9 4.5 97 3-103 120-246 (479)
245 2igt_A SAM dependent methyltra 90.2 0.22 7.5E-06 40.9 3.6 68 3-71 156-231 (332)
246 1wxx_A TT1595, hypothetical pr 90.1 0.2 6.7E-06 41.1 3.2 103 2-106 211-328 (382)
247 3uzu_A Ribosomal RNA small sub 89.4 0.36 1.2E-05 39.0 4.3 85 2-89 44-137 (279)
248 2as0_A Hypothetical protein PH 89.4 0.39 1.3E-05 39.3 4.5 104 2-106 219-338 (396)
249 2f8l_A Hypothetical protein LM 88.9 0.39 1.3E-05 38.5 4.0 72 3-78 133-214 (344)
250 2dul_A N(2),N(2)-dimethylguano 88.7 0.18 6.1E-06 42.5 2.1 96 2-103 49-164 (378)
251 3gjy_A Spermidine synthase; AP 88.5 0.46 1.6E-05 39.9 4.4 98 3-103 92-200 (317)
252 4dmg_A Putative uncharacterize 87.6 0.25 8.7E-06 41.8 2.3 69 2-71 216-286 (393)
253 2ih2_A Modification methylase 86.6 0.49 1.7E-05 37.9 3.4 61 3-71 42-104 (421)
254 3m4x_A NOL1/NOP2/SUN family pr 85.8 0.33 1.1E-05 42.4 2.2 97 3-102 108-233 (456)
255 2qfm_A Spermine synthase; sper 85.2 0.35 1.2E-05 41.9 2.0 99 2-103 190-314 (364)
256 2p41_A Type II methyltransfera 85.1 0.71 2.4E-05 37.5 3.6 97 2-104 84-192 (305)
257 2qy6_A UPF0209 protein YFCK; s 84.6 1 3.6E-05 36.0 4.4 96 3-102 63-211 (257)
258 3ajd_A Putative methyltransfer 83.8 0.43 1.5E-05 37.2 1.8 66 2-71 85-162 (274)
259 1qyr_A KSGA, high level kasuga 82.1 0.24 8.1E-06 39.4 -0.3 82 3-89 24-113 (252)
260 2okc_A Type I restriction enzy 81.9 1.5 5E-05 36.8 4.4 66 3-72 174-260 (445)
261 4df3_A Fibrillarin-like rRNA/T 81.8 2 7E-05 34.4 5.0 89 3-97 80-175 (233)
262 3cvo_A Methyltransferase-like 81.3 5.3 0.00018 31.5 7.2 91 2-102 32-153 (202)
263 2oyr_A UPF0341 protein YHIQ; a 78.3 2.9 9.8E-05 33.7 4.9 102 2-104 90-221 (258)
264 3bt7_A TRNA (uracil-5-)-methyl 77.6 1.7 5.8E-05 35.5 3.3 40 3-43 216-257 (369)
265 3axs_A Probable N(2),N(2)-dime 77.6 1.6 5.6E-05 37.3 3.4 116 2-125 54-184 (392)
266 3o4f_A Spermidine synthase; am 75.7 3.6 0.00012 34.4 4.9 103 2-110 85-206 (294)
267 3k6r_A Putative transferase PH 75.0 2.8 9.5E-05 34.2 4.0 93 3-103 128-225 (278)
268 3ll7_A Putative methyltransfer 71.2 1.4 4.8E-05 38.3 1.4 69 2-71 95-169 (410)
269 1njg_A DNA polymerase III subu 70.9 16 0.00056 25.0 6.5 85 68-152 128-216 (250)
270 2wk1_A NOVP; transferase, O-me 68.1 7.6 0.00026 31.9 5.1 98 3-104 109-245 (282)
271 2k4m_A TR8_protein, UPF0146 pr 67.9 3.2 0.00011 32.8 2.7 77 3-98 38-118 (153)
272 3k0b_A Predicted N6-adenine-sp 64.5 17 0.00057 30.6 6.6 79 25-108 265-356 (393)
273 3rht_A (gatase1)-like protein; 64.4 9 0.00031 31.3 4.8 39 64-104 49-88 (259)
274 2b9e_A NOL1/NOP2/SUN domain fa 61.1 13 0.00044 30.3 5.2 66 3-71 105-180 (309)
275 2chg_A Replication factor C sm 58.5 40 0.0014 22.9 6.8 84 68-151 104-191 (226)
276 3lkd_A Type I restriction-modi 58.1 12 0.00041 33.2 4.8 67 3-71 224-303 (542)
277 3c6k_A Spermine synthase; sper 51.2 11 0.00037 33.0 3.3 24 2-25 207-230 (381)
278 3l5o_A Uncharacterized protein 51.0 7.7 0.00026 32.3 2.3 35 82-119 197-232 (270)
279 3r24_A NSP16, 2'-O-methyl tran 48.8 6.1 0.00021 35.0 1.4 85 3-101 112-215 (344)
280 2vz8_A Fatty acid synthase; tr 48.6 10 0.00035 39.5 3.2 93 3-101 1243-1346(2512)
281 1iqp_A RFCS; clamp loader, ext 47.1 40 0.0014 25.1 5.5 93 59-152 104-200 (327)
282 3ua3_A Protein arginine N-meth 45.8 13 0.00044 35.6 3.2 88 3-100 412-531 (745)
283 3ldg_A Putative uncharacterize 45.3 48 0.0016 27.9 6.3 78 25-108 258-349 (384)
284 3eag_A UDP-N-acetylmuramate:L- 44.9 42 0.0014 26.9 5.6 101 1-106 4-118 (326)
285 4auk_A Ribosomal RNA large sub 44.7 66 0.0023 28.0 7.3 94 3-106 214-309 (375)
286 1jr3_A DNA polymerase III subu 43.5 63 0.0021 24.8 6.2 84 68-151 121-208 (373)
287 1lss_A TRK system potassium up 43.3 61 0.0021 21.0 5.4 94 3-107 6-107 (140)
288 2g5c_A Prephenate dehydrogenas 40.1 1.1E+02 0.0039 23.0 7.2 92 1-106 1-100 (281)
289 1uf3_A Hypothetical protein TT 39.9 69 0.0024 22.5 5.6 8 50-57 9-16 (228)
290 2chq_A Replication factor C sm 37.9 91 0.0031 23.1 6.2 88 60-150 97-190 (319)
291 1sxj_B Activator 1 37 kDa subu 37.2 1E+02 0.0035 22.9 6.4 82 68-151 109-196 (323)
292 2pe4_A Hyaluronidase-1; hyalur 36.9 16 0.00055 32.9 2.3 49 50-103 251-304 (424)
293 1sxj_D Activator 1 41 kDa subu 36.6 1.4E+02 0.0046 22.7 7.1 87 65-152 133-223 (353)
294 3upu_A ATP-dependent DNA helic 35.6 24 0.00082 29.4 2.9 47 57-112 14-61 (459)
295 1iuk_A Hypothetical protein TT 35.5 1.1E+02 0.0039 21.8 6.2 87 2-105 14-105 (140)
296 2uyo_A Hypothetical protein ML 34.9 61 0.0021 26.5 5.2 136 2-142 104-274 (310)
297 1i4w_A Mitochondrial replicati 33.7 18 0.00062 30.7 1.9 29 3-31 61-90 (353)
298 3ldu_A Putative methylase; str 33.2 56 0.0019 27.2 4.8 79 25-108 259-350 (385)
299 3c24_A Putative oxidoreductase 33.2 1.4E+02 0.0047 22.8 6.7 86 1-102 11-100 (286)
300 2h1q_A Hypothetical protein; Z 33.1 20 0.00068 29.7 2.0 53 46-106 159-222 (270)
301 2ar0_A M.ecoki, type I restric 32.5 21 0.0007 31.4 2.1 67 3-71 172-267 (541)
302 3g2e_A OORC subunit of 2-oxogl 32.3 35 0.0012 26.1 3.2 82 3-103 6-99 (194)
303 2zig_A TTHA0409, putative modi 31.1 32 0.0011 27.1 2.8 49 3-52 238-288 (297)
304 2yv2_A Succinyl-COA synthetase 30.8 25 0.00085 28.6 2.2 40 76-115 77-117 (297)
305 3syl_A Protein CBBX; photosynt 29.6 1.1E+02 0.0037 22.9 5.5 86 69-154 133-237 (309)
306 1z63_A Helicase of the SNF2/RA 28.4 80 0.0027 25.7 4.9 86 64-151 148-234 (500)
307 1yg2_A Gene activator APHA; vi 28.4 26 0.00088 25.9 1.8 49 4-55 10-58 (179)
308 2qby_B CDC6 homolog 3, cell di 28.3 25 0.00086 27.1 1.8 61 26-86 312-372 (384)
309 3f8b_A Transcriptional regulat 28.1 20 0.00069 25.1 1.1 49 4-55 20-68 (116)
310 3idw_A Actin cytoskeleton-regu 27.9 23 0.00079 25.1 1.4 16 130-145 5-20 (72)
311 3khk_A Type I restriction-modi 27.2 57 0.002 28.8 4.1 68 3-71 247-335 (544)
312 3iec_E 120 kDa protein, cytoto 27.0 15 0.00053 28.4 0.4 37 82-123 51-87 (125)
313 1rjd_A PPM1P, carboxy methyl t 26.8 1.1E+02 0.0037 25.3 5.4 79 62-140 191-281 (334)
314 1oi7_A Succinyl-COA synthetase 26.7 30 0.001 27.9 2.1 98 3-115 9-110 (288)
315 2fph_X YLMH; division protein, 25.4 25 0.00086 26.6 1.3 37 76-113 34-70 (165)
316 2kwt_A Protease NS2-3; NS2 dom 24.9 28 0.00095 21.7 1.2 10 127-136 7-16 (33)
317 2duw_A Putative COA-binding pr 24.9 1.6E+02 0.0056 21.0 5.5 83 3-103 15-103 (145)
318 3bos_A Putative DNA replicatio 24.4 1.6E+02 0.0053 20.6 5.2 86 66-152 105-205 (242)
319 1ur5_A Malate dehydrogenase; o 23.9 1.9E+02 0.0065 23.1 6.3 105 2-112 3-128 (309)
320 2yv1_A Succinyl-COA ligase [AD 23.5 38 0.0013 27.5 2.1 40 76-115 76-116 (294)
321 2nxf_A Putative dimetal phosph 23.1 61 0.0021 23.8 3.0 8 96-103 52-59 (322)
322 3rco_A Tudor domain-containing 22.8 49 0.0017 23.8 2.3 42 57-109 44-87 (89)
323 3npg_A Uncharacterized DUF364 22.6 40 0.0014 27.3 2.1 57 42-104 130-198 (249)
324 1jbi_A Cochlin, COCH-5B2; alph 22.1 34 0.0012 24.6 1.4 34 9-51 25-58 (100)
325 3on3_A Keto/oxoacid ferredoxin 21.8 69 0.0024 24.0 3.1 81 3-103 7-99 (183)
326 2raa_A Pyruvate synthase subun 21.8 1.2E+02 0.0041 23.2 4.6 69 17-103 41-114 (204)
327 3gbv_A Putative LACI-family tr 21.5 89 0.003 22.7 3.5 44 79-122 54-97 (304)
328 3ax6_A Phosphoribosylaminoimid 21.4 3E+02 0.01 21.6 8.3 10 1-10 1-10 (380)
329 4hv4_A UDP-N-acetylmuramate--L 21.3 1.8E+02 0.0061 24.8 5.9 99 1-106 22-132 (494)
330 3l7w_A Putative uncharacterize 21.3 29 0.001 23.7 0.9 44 4-54 17-60 (108)
331 3tr3_A BOLA; cellular processe 21.2 67 0.0023 22.3 2.7 45 63-107 30-78 (82)
332 1mld_A Malate dehydrogenase; o 20.9 1.7E+02 0.0059 23.5 5.5 114 3-119 2-135 (314)
333 2atm_A Hyaluronoglucosaminidas 20.8 42 0.0014 29.2 1.9 29 75-103 270-298 (331)
334 2cqj_A BRMS2, U3 small nucleol 20.7 60 0.002 21.5 2.3 23 38-60 23-45 (71)
335 3izc_W 60S ribosomal protein R 20.1 24 0.00083 27.1 0.2 31 67-97 62-99 (121)
No 1
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.10 E-value=1.4e-10 Score=83.90 Aligned_cols=134 Identities=16% Similarity=0.106 Sum_probs=97.3
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccChh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 81 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLspr 81 (171)
.+||++|.|++.....|.+. +.+..|||+++- .-..|+.....-.+.++|+ ..+|+...+||+|+.+++|.|++++
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~--~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASL-GHQIEGLEPATR--LVELARQTHPSVTFHHGTI-TDLSDSPKRWAGLLAWYSLIHMGPG 118 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHT-TCCEEEECCCHH--HHHHHHHHCTTSEEECCCG-GGGGGSCCCEEEEEEESSSTTCCTT
T ss_pred CeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHH--HHHHHHHhCCCCeEEeCcc-cccccCCCCeEEEEehhhHhcCCHH
Confidence 47999999999988888755 678999988642 2233443333445677888 6788889999999999999999999
Q ss_pred hhhchhhhhhhhccC-ceEEEecCCCcchhhhhhhhhcCCCccccchhHHHHHHHHhccccc
Q 030792 82 YLNKTLPDLARVASD-GVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 82 ylNkTlPeLaRvs~d-giVif~g~pgq~~ak~~elskfgr~ak~RsssWW~r~F~q~~leeN 142 (171)
.+.+.|.++.|+-+. |.++++-..+.. ...+..........+...|.+.|.++|++.-
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 177 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSGPS---LEPMYHPVATAYRWPLPELAQALETAGFQVT 177 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECCSS---CEEECCSSSCEEECCHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccCCc---hhhhhchhhhhccCCHHHHHHHHHHCCCcEE
Confidence 999999999998775 455544422222 2223333334456778899999999998753
No 2
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.97 E-value=1.6e-09 Score=79.09 Aligned_cols=130 Identities=15% Similarity=0.134 Sum_probs=95.5
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccChh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 81 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLspr 81 (171)
.+||++|.|++.....|.+. +.+..||++++- .-..|+... .--+..+|+ ..+| ...+||+|+.+++|.|+.+.
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~--~~~~a~~~~-~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAA-GFDVDATDGSPE--LAAEASRRL-GRPVRTMLF-HQLD-AIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHT-TCEEEEEESCHH--HHHHHHHHH-TSCCEECCG-GGCC-CCSCEEEEEECSCGGGSCHH
T ss_pred CcEEEECCCCCHHHHHHHHc-CCeEEEECCCHH--HHHHHHHhc-CCceEEeee-ccCC-CCCcEEEEEecCchhhcCHH
Confidence 37999999999998888855 678889987642 222333333 334667887 5677 78999999999999999999
Q ss_pred hhhchhhhhhhhccC-ceEEEecCCCcchhhhhhhhhcCCCccccchhHHHHHHHHhc-ccc
Q 030792 82 YLNKTLPDLARVASD-GVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTS-LEE 141 (171)
Q Consensus 82 ylNkTlPeLaRvs~d-giVif~g~pgq~~ak~~elskfgr~ak~RsssWW~r~F~q~~-lee 141 (171)
.+.+.|.++.|+-+. |.++++-.++.. . ....+++.....+...|.+.|.++| ++.
T Consensus 119 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~l~~aG~f~~ 176 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGLFYASYKSGEG-E---GRDKLARYYNYPSEEWLRARYAEAGTWAS 176 (211)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCSS-C---EECTTSCEECCCCHHHHHHHHHHHCCCSE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEcCCCc-c---cccccchhccCCCHHHHHHHHHhCCCcEE
Confidence 999999999998765 455554333332 1 2234566667778999999999999 753
No 3
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.96 E-value=1.9e-09 Score=80.09 Aligned_cols=126 Identities=17% Similarity=0.152 Sum_probs=92.6
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHh------cceeeeeecCCCCCCCCcccEEEEccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK------GIVRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~k------G~VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
+||++|.|++.....|.+ .+.+..||++++- +-..|+..... =-+.++|+ +.+| -..+||+|+.+.+|.
T Consensus 69 ~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~--~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~-~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 69 RALVPGCGGGHDVVAMAS-PERFVVGLDISES--ALAKANETYGSSPKAEYFSFVKEDV-FTWR-PTELFDLIFDYVFFC 143 (235)
T ss_dssp EEEEETCTTCHHHHHHCB-TTEEEEEECSCHH--HHHHHHHHHTTSGGGGGEEEECCCT-TTCC-CSSCEEEEEEESSTT
T ss_pred CEEEeCCCCCHHHHHHHh-CCCeEEEEECCHH--HHHHHHHHhhccCCCcceEEEECch-hcCC-CCCCeeEEEEChhhh
Confidence 799999999999888874 6778899988752 22333443333 23667888 4455 345999999999999
Q ss_pred ccChhhhhchhhhhhhh-ccCceEEEecCCCcchhhhhhhhhcCCCccccchhHHHHHHHHhcccc
Q 030792 77 YLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 77 yLsprylNkTlPeLaRv-s~dgiVif~g~pgq~~ak~~elskfgr~ak~RsssWW~r~F~q~~lee 141 (171)
|+.|....+.|.++.|+ ..+|.+++..++.... .+.|.-..+...|.+.|.++|++.
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~Gf~~ 201 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMYPITDH--------VGGPPYKVDVSTFEEVLVPIGFKA 201 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCC--------CSCSSCCCCHHHHHHHHGGGTEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEeccccc--------CCCCCccCCHHHHHHHHHHcCCeE
Confidence 99999999999999995 5578888877765532 122223467789999999999864
No 4
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.91 E-value=1.5e-09 Score=81.22 Aligned_cols=134 Identities=12% Similarity=0.042 Sum_probs=91.9
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHh-----cceeeeeecCCCCCCCCcccEEEEccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-----GIVRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~k-----G~VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
.+||++|.|++.+...|++....+..|||+.+-- -..++..... -.+..+|+ ..+|....+||+||++++|.
T Consensus 81 ~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~--~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 81 SCALDCGAGIGRITKRLLLPLFREVDMVDITEDF--LVQAKTYLGEEGKRVRNYFCCGL-QDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp SEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHH--HHHHHHHTGGGGGGEEEEEECCG-GGCCCCSSCEEEEEEESCGG
T ss_pred CEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHH--HHHHHHHhhhcCCceEEEEEcCh-hhcCCCCCCEEEEEEcchhh
Confidence 3799999999999999887766688999876422 2223333222 23567787 56777788999999999999
Q ss_pred ccChhhhhchhhhhhhhcc-CceEEEecCCCcchhhhhhhhhcCCCccccchhHHHHHHHHhccccc
Q 030792 77 YLSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 77 yLsprylNkTlPeLaRvs~-dgiVif~g~pgq~~ak~~elskfgr~ak~RsssWW~r~F~q~~leeN 142 (171)
|+.+..+.+.|-++.|+-+ +|.++++.. .... ..+-.-....-.++..-|.+.|.++|++.-
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 220 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDN-MAQE---GVILDDVDSSVCRDLDVVRRIICSAGLSLL 220 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEE-EBSS---SEEEETTTTEEEEBHHHHHHHHHHTTCCEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEc-cCCC---cceecccCCcccCCHHHHHHHHHHcCCeEE
Confidence 9999888899999999766 566666442 1111 001000112234577888999999988643
No 5
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.91 E-value=5.9e-09 Score=73.02 Aligned_cols=120 Identities=16% Similarity=0.160 Sum_probs=85.6
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEc-ccccccCh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALDYLSP 80 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivS-DaLdyLsp 80 (171)
.+||++|.|++.....|.+. +.+..|||+.+- .-..++.....--+..+|+ ..+|+...+||+|+++ +++.|+++
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~--~~~~a~~~~~~~~~~~~d~-~~~~~~~~~~D~i~~~~~~~~~~~~ 123 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPI--LIDYAKQDFPEARWVVGDL-SVDQISETDFDLIVSAGNVMGFLAE 123 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHT-TCEEEEEESCHH--HHHHHHHHCTTSEEEECCT-TTSCCCCCCEEEEEECCCCGGGSCH
T ss_pred CeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHH--HHHHHHHhCCCCcEEEccc-ccCCCCCCceeEEEECCcHHhhcCh
Confidence 37999999999988888865 678888887642 2233333333345567787 4567778999999999 99999999
Q ss_pred hhhhchhhhhhhhccC-ceEEEecCCCcchhhhhhhhhcCCCccccchhHHHHHHHHhcccc
Q 030792 81 KYLNKTLPDLARVASD-GVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 81 rylNkTlPeLaRvs~d-giVif~g~pgq~~ak~~elskfgr~ak~RsssWW~r~F~q~~lee 141 (171)
..+.+.|.++.|+-+. |+++++-.+.+. .+..-|.+.+.++|++.
T Consensus 124 ~~~~~~l~~~~~~l~~~G~l~~~~~~~~~----------------~~~~~~~~~l~~~Gf~~ 169 (195)
T 3cgg_A 124 DGREPALANIHRALGADGRAVIGFGAGRG----------------WVFGDFLEVAERVGLEL 169 (195)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEETTSS----------------CCHHHHHHHHHHHTEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCCCCC----------------cCHHHHHHHHHHcCCEE
Confidence 9999999999998665 555554322211 34556777777777754
No 6
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.90 E-value=4.5e-09 Score=77.05 Aligned_cols=98 Identities=17% Similarity=0.169 Sum_probs=74.0
Q ss_pred ccceeecCCchhHhHhhhhccc-ccccccccccccchhHHHHHHhH-h---------cceeeeeecCCCCCCCCcccEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYDIEDADARCKSLVH-K---------GIVRVADIKFPLPYRAKSFPLVI 70 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~-teAWGVEPyd~~d~d~~CksLv~-k---------G~VRvadikfpLPYR~KSFslVi 70 (171)
.+||++|.|++.....|.+... .+..|||+++- .-..++...+ . =-+..+|+ ..+|....+||+|+
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~--~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 31 KKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYS--VLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDAAT 107 (219)
T ss_dssp CEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHH--HHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSEEE
T ss_pred CEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHH--HHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCEEE
Confidence 4799999999999988886543 68999998742 2333333322 2 23456787 56788889999999
Q ss_pred EcccccccChhhhhchhhhhhhhccCceEEEe
Q 030792 71 VSDALDYLSPKYLNKTLPDLARVASDGVLIFA 102 (171)
Q Consensus 71 vSDaLdyLsprylNkTlPeLaRvs~dgiVif~ 102 (171)
.+++|+|+++..+.+.|.++.|+-+.|-++++
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~ 139 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRPQTVIVS 139 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEE
Confidence 99999999998899999999998876544433
No 7
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.89 E-value=9.8e-10 Score=79.21 Aligned_cols=141 Identities=17% Similarity=0.219 Sum_probs=92.9
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 79 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLs 79 (171)
.+||++|.|++.....++.+.+.+..|||+++- +-+..++...-..--+..+|+ ..+|+...+||+|++++++.|++
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~ 103 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDI-RKLPFKDESMSFVYSYGTIFHMR 103 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCT-TSCCSCTTCEEEEEECSCGGGSC
T ss_pred CEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECch-hhCCCCCCceeEEEEcChHHhCC
Confidence 379999999998866666677788999998752 223333322211234667888 56888889999999999999999
Q ss_pred hhhhhchhhhhhhhccC-ceEEEecC-CCcchhhh-hhh-------hhcCCCc--cccchhHHHHHHHHhccccch
Q 030792 80 PKYLNKTLPDLARVASD-GVLIFAGY-PGQQRAKV-AEL-------SKFGRPA--KMRSSSWWIRYFVQTSLEENE 143 (171)
Q Consensus 80 prylNkTlPeLaRvs~d-giVif~g~-pgq~~ak~-~el-------skfgr~a--k~RsssWW~r~F~q~~leeNe 143 (171)
+....+.+.++.|+-+. |+++++-+ +.+.+... ..+ ..-+.|. ..-+...|.++|.+.|+.+-+
T Consensus 104 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~ 179 (209)
T 2p8j_A 104 KNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKE 179 (209)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeee
Confidence 99999999999998664 55555442 22211100 000 0112222 344667788899888876544
No 8
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.88 E-value=1.5e-09 Score=80.49 Aligned_cols=135 Identities=15% Similarity=0.167 Sum_probs=92.4
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH---hcceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH---KGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~---kG~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
.+||++|.|++.+...|++....+..|||+.+- .-..++.... .-.+..+|+ ..+|+...+||+|+++++|.|+
T Consensus 95 ~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~ 171 (254)
T 1xtp_A 95 SRALDCGAGIGRITKNLLTKLYATTDLLEPVKH--MLEEAKRELAGMPVGKFILASM-ETATLPPNTYDLIVIQWTAIYL 171 (254)
T ss_dssp SEEEEETCTTTHHHHHTHHHHCSEEEEEESCHH--HHHHHHHHTTTSSEEEEEESCG-GGCCCCSSCEEEEEEESCGGGS
T ss_pred CEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHH--HHHHHHHHhccCCceEEEEccH-HHCCCCCCCeEEEEEcchhhhC
Confidence 379999999999999888766566888887642 1222333322 234556787 5688888999999999999999
Q ss_pred Chhhhhchhhhhhhhcc-CceEEEecCCCcchhhhhhhhhcCCCccccchhHHHHHHHHhccccc
Q 030792 79 SPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 79 sprylNkTlPeLaRvs~-dgiVif~g~pgq~~ak~~elskfgr~ak~RsssWW~r~F~q~~leeN 142 (171)
++..+.+.|-++.|+-+ +|+++++......... ........-.++..-|.+.|.++|++.-
T Consensus 172 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 233 (254)
T 1xtp_A 172 TDADFVKFFKHCQQALTPNGYIFFKENCSTGDRF---LVDKEDSSLTRSDIHYKRLFNESGVRVV 233 (254)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCE---EEETTTTEEEBCHHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccc---eecccCCcccCCHHHHHHHHHHCCCEEE
Confidence 99899999999999876 4666665421110000 0011112235677889999999998754
No 9
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.87 E-value=1.7e-08 Score=73.57 Aligned_cols=134 Identities=16% Similarity=0.246 Sum_probs=89.6
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-hcceeeeeecCCCCCCCCcccEEEEcccccccCh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 80 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-kG~VRvadikfpLPYR~KSFslVivSDaLdyLsp 80 (171)
.+||++|.|++.....|.+. +.+..|||+.+- .-..++.... .-.+..+|+ ..+|+. .+||+|+.+++|.|+..
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~d~-~~~~~~-~~fD~v~~~~~l~~~~~ 121 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSRE--MRMIAKEKLPKEFSITEGDF-LSFEVP-TSIDTIVSTYAFHHLTD 121 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHT-TCEEEEECSCHH--HHHHHHHHSCTTCCEESCCS-SSCCCC-SCCSEEEEESCGGGSCH
T ss_pred CeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHH--HHHHHHHhCCCceEEEeCCh-hhcCCC-CCeEEEEECcchhcCCh
Confidence 37999999999988888855 778999988653 2233333333 345677888 667777 99999999999999998
Q ss_pred hhhhchhhhhhhhcc-CceEEEec--CCCcc--hhhhhhhhhcC--------CCccccchhHHHHHHHHhccc
Q 030792 81 KYLNKTLPDLARVAS-DGVLIFAG--YPGQQ--RAKVAELSKFG--------RPAKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 81 rylNkTlPeLaRvs~-dgiVif~g--~pgq~--~ak~~elskfg--------r~ak~RsssWW~r~F~q~~le 140 (171)
...-+.|.++.|+-+ +|.++++. .++.. ......+..-| .+....+...|.+.|.++|++
T Consensus 122 ~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 194 (220)
T 3hnr_A 122 DEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFH 194 (220)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCE
Confidence 876678999999866 45665553 22211 11111111111 111234667888888888875
No 10
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.86 E-value=6.2e-09 Score=76.46 Aligned_cols=99 Identities=14% Similarity=0.097 Sum_probs=73.4
Q ss_pred ccceeecCCchhHhHhhhhccc-ccccccccccccchhHHHHHHhH----------hcceeeeeecCCCCCCCCcccEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYDIEDADARCKSLVH----------KGIVRVADIKFPLPYRAKSFPLVI 70 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~-teAWGVEPyd~~d~d~~CksLv~----------kG~VRvadikfpLPYR~KSFslVi 70 (171)
.+||++|.|++.....|.+... .+..|||+++- .-..|+..++ +--+..+|+ ..+|....+||+|+
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~--~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYR--SLEIAQERLDRLRLPRNQWERLQLIQGAL-TYQDKRFHGYDAAT 107 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHH--HHHHHHHHHTTCCCCHHHHTTEEEEECCT-TSCCGGGCSCSEEE
T ss_pred CEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHH--HHHHHHHHHHHhcCCcccCcceEEEeCCc-ccccccCCCcCEEe
Confidence 3799999999999998886543 68899998642 2333333332 223556777 45667778999999
Q ss_pred EcccccccChhhhhchhhhhhhhccC-ceEEEec
Q 030792 71 VSDALDYLSPKYLNKTLPDLARVASD-GVLIFAG 103 (171)
Q Consensus 71 vSDaLdyLsprylNkTlPeLaRvs~d-giVif~g 103 (171)
++++|+|+++..+.+.|.++.|+-+. |++|++-
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 99999999999999999999998764 5444443
No 11
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.84 E-value=1.1e-09 Score=81.07 Aligned_cols=135 Identities=15% Similarity=0.173 Sum_probs=94.2
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHh---cceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK---GIVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~k---G~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
.+||++|.|++.....|.+.-+.+..||++++- .-..|+..... =-+.++|+ ..+|+...+||+|+.+++|.|+
T Consensus 57 ~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~ 133 (266)
T 3ujc_A 57 SKVLDIGSGLGGGCMYINEKYGAHTHGIDICSN--IVNMANERVSGNNKIIFEANDI-LTKEFPENNFDLIYSRDAILAL 133 (266)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCCEEEEEESCHH--HHHHHHHTCCSCTTEEEEECCT-TTCCCCTTCEEEEEEESCGGGS
T ss_pred CEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhhcCCCeEEEECcc-ccCCCCCCcEEEEeHHHHHHhc
Confidence 379999999999998888765778999988652 22233333322 23467788 5678889999999999999999
Q ss_pred ChhhhhchhhhhhhhccC-ceEEEecCCCcc----hhhh-hhhhhcCCCccccchhHHHHHHHHhcccc
Q 030792 79 SPKYLNKTLPDLARVASD-GVLIFAGYPGQQ----RAKV-AELSKFGRPAKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 79 sprylNkTlPeLaRvs~d-giVif~g~pgq~----~ak~-~elskfgr~ak~RsssWW~r~F~q~~lee 141 (171)
++....+.|.++.|+-+. |.++++...... .... ..+...| ..+.+...|.+.+.++|++.
T Consensus 134 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~Gf~~ 200 (266)
T 3ujc_A 134 SLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRK--YTLITVEEYADILTACNFKN 200 (266)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHT--CCCCCHHHHHHHHHHTTCEE
T ss_pred ChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCC--CCCCCHHHHHHHHHHcCCeE
Confidence 999999999999998764 566665421111 0111 1111222 23567888999999999863
No 12
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.83 E-value=1.6e-08 Score=75.58 Aligned_cols=132 Identities=15% Similarity=0.061 Sum_probs=87.3
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCC-CCCCCcccEEEEcccccccCh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPL-PYRAKSFPLVIVSDALDYLSP 80 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpL-PYR~KSFslVivSDaLdyLsp 80 (171)
.+||++|.|++.....|.+ .+.+..||++++- .-..|+.. --+..+|+.-.+ |+...+||+|+++++|+|+.+
T Consensus 43 ~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~--~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~ 116 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKE-EGIESIGVDINED--MIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP 116 (240)
T ss_dssp SCEEEETCTTTHHHHHHHH-HTCCEEEECSCHH--HHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG
T ss_pred CeEEEEeCCCCHHHHHHHh-CCCcEEEEECCHH--HHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc
Confidence 4699999999999877775 4678899987642 12222222 223445653322 788899999999999999999
Q ss_pred hhhhchhhhhhhhccCc-eEEEec-CCCcchhhhhhhhhcCCCccccchhHHHHHHHHhccc
Q 030792 81 KYLNKTLPDLARVASDG-VLIFAG-YPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 81 rylNkTlPeLaRvs~dg-iVif~g-~pgq~~ak~~elskfgr~ak~RsssWW~r~F~q~~le 140 (171)
..+.+.+-++.|+-+.| .++++. .|... ....+.--+..-....+..-|.+.+.++|++
T Consensus 117 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 177 (240)
T 3dli_A 117 ERLFELLSLCYSKMKYSSYIVIESPNPTSL-YSLINFYIDPTHKKPVHPETLKFILEYLGFR 177 (240)
T ss_dssp GGHHHHHHHHHHHBCTTCCEEEEEECTTSH-HHHHHHTTSTTCCSCCCHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCCcchh-HHHHHHhcCccccccCCHHHHHHHHHHCCCe
Confidence 99999999999987754 544443 22221 1122211111223445667788899998876
No 13
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.83 E-value=1.1e-08 Score=73.22 Aligned_cols=96 Identities=9% Similarity=0.204 Sum_probs=71.6
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHh-Hhc-----ceeeeeecCCCCCCCCcccEEEEccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV-HKG-----IVRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv-~kG-----~VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
+||++|.|++.....|.+..+.+..|||+.+-- -..++..+ +.| -+..+|+ ..+|+...+||+|+.+++|.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~--~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDFSIRALDFSKHM--NEIALKNIADANLNDRIQIVQGDV-HNIPIEDNYADLIVSRGSVF 122 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHH--HHHHHHHHHHTTCTTTEEEEECBT-TBCSSCTTCEEEEEEESCGG
T ss_pred EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHH--HHHHHHHHHhccccCceEEEEcCH-HHCCCCcccccEEEECchHh
Confidence 699999999999988887767789999886421 22223222 223 2467888 67888899999999999999
Q ss_pred ccChhhhhchhhhhhhhcc-CceEEEec
Q 030792 77 YLSPKYLNKTLPDLARVAS-DGVLIFAG 103 (171)
Q Consensus 77 yLsprylNkTlPeLaRvs~-dgiVif~g 103 (171)
|+ ....+.|.++.|+-+ +|.++++.
T Consensus 123 ~~--~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 123 FW--EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp GC--SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hc--cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 99 456678999998765 56666654
No 14
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.73 E-value=2.5e-08 Score=72.25 Aligned_cols=98 Identities=16% Similarity=0.268 Sum_probs=72.9
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-hc---------ceeeeeecCCCCCCCCcccEEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KG---------IVRVADIKFPLPYRAKSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-kG---------~VRvadikfpLPYR~KSFslViv 71 (171)
.+||++|.|++.+...|.+. +.+..|||+.+- .-..++...+ .| -+.++|+ ..+|+...+||+|++
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASK-GYSVTGIDINSE--AIRLAETAARSPGLNQKTGGKAEFKVENA-SSLSFHDSSFDFAVM 107 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHT-TCEEEEEESCHH--HHHHHHHHTTCCSCCSSSSCEEEEEECCT-TSCCSCTTCEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhC-CCeEEEEECCHH--HHHHHHHHHHhcCCccccCcceEEEEecc-cccCCCCCceeEEEE
Confidence 37999999999988888865 678889887642 2233333332 33 2556787 578888999999999
Q ss_pred cccccccC-hhhhhchhhhhhhhcc-CceEEEec
Q 030792 72 SDALDYLS-PKYLNKTLPDLARVAS-DGVLIFAG 103 (171)
Q Consensus 72 SDaLdyLs-prylNkTlPeLaRvs~-dgiVif~g 103 (171)
+++|.|+. |...-+.|.++.|+-+ +|.++++.
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 99999995 7777789999998765 56666654
No 15
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.73 E-value=6e-08 Score=72.19 Aligned_cols=131 Identities=10% Similarity=0.172 Sum_probs=87.6
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhHh--cceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~k--G~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
+||++|.|++.....|.+....+..|||+++- +-+..+++..--. =.+..+|+ ..+|+...+||+|+++.++.|+
T Consensus 49 ~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~ 127 (257)
T 3f4k_A 49 KIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEGAIYNI 127 (257)
T ss_dssp EEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEESCSCCC
T ss_pred eEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecChHhhc
Confidence 79999999999999888776669999998753 2233333322111 23567888 7889999999999999999999
Q ss_pred Chhhhhchhhhhhhhcc-CceEEEec---CCCcchhhhhhh-h-hcCCCccccchhHHHHHHHHhccc
Q 030792 79 SPKYLNKTLPDLARVAS-DGVLIFAG---YPGQQRAKVAEL-S-KFGRPAKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 79 sprylNkTlPeLaRvs~-dgiVif~g---~pgq~~ak~~el-s-kfgr~ak~RsssWW~r~F~q~~le 140 (171)
. ..+.|.++.|+-+ +|.++++. .+........+. . .+ ..+.+..-|.+.+.++|++
T Consensus 128 ~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~aGf~ 189 (257)
T 3f4k_A 128 G---FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAY---PEISVIPTCIDKMERAGYT 189 (257)
T ss_dssp C---HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHC---TTCCBHHHHHHHHHHTTEE
T ss_pred C---HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhC---CCCCCHHHHHHHHHHCCCe
Confidence 5 4578888888655 46665553 111111111111 1 11 1266777888888888874
No 16
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.70 E-value=6.8e-08 Score=72.74 Aligned_cols=135 Identities=19% Similarity=0.272 Sum_probs=87.6
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-hc-----ceeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KG-----IVRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-kG-----~VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.|++.....|.+..+.+..||++++-- -..++...+ .| -+..+|+ ..+|+...+||+|+++++|
T Consensus 63 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~--~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l 139 (273)
T 3bus_A 63 DRVLDVGCGIGKPAVRLATARDVRVTGISISRPQ--VNQANARATAAGLANRVTFSYADA-MDLPFEDASFDAVWALESL 139 (273)
T ss_dssp CEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHH--HHHHHHHHHHTTCTTTEEEEECCT-TSCCSCTTCEEEEEEESCT
T ss_pred CEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHH--HHHHHHHHHhcCCCcceEEEECcc-ccCCCCCCCccEEEEechh
Confidence 3799999999999888887667889999886532 122333222 23 3556787 6688888999999999999
Q ss_pred cccChhhhhchhhhhhhhccC-ceEEEecC----CCc--chhhhhhhhhcCCCccccchhHHHHHHHHhcccc
Q 030792 76 DYLSPKYLNKTLPDLARVASD-GVLIFAGY----PGQ--QRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~d-giVif~g~----pgq--~~ak~~elskfgr~ak~RsssWW~r~F~q~~lee 141 (171)
.|+... .+.|-++.|+-+. |.++++.. |.. .+..............+.+..-|.+.+.++|++.
T Consensus 140 ~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 210 (273)
T 3bus_A 140 HHMPDR--GRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVV 210 (273)
T ss_dssp TTSSCH--HHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEE
T ss_pred hhCCCH--HHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeE
Confidence 999543 6788899998665 55554431 111 1111111111111224566677788888888763
No 17
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.70 E-value=4.4e-08 Score=70.48 Aligned_cols=130 Identities=12% Similarity=0.068 Sum_probs=84.6
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhc----ceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG----IVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG----~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|.|++.+...|.+. +.+..|||+.+-- -..|+. .| -+..+|+. .+ ....+||+|+++.+|.|
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~--~~~a~~---~~~~~~~~~~~d~~-~~-~~~~~~D~v~~~~~l~~ 119 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGL-ADRVTALDGSAEM--IAEAGR---HGLDNVEFRQQDLF-DW-TPDRQWDAVFFAHWLAH 119 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHH--HHHHGG---GCCTTEEEEECCTT-SC-CCSSCEEEEEEESCGGG
T ss_pred CeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHH--HHHHHh---cCCCCeEEEecccc-cC-CCCCceeEEEEechhhc
Confidence 37999999999888888755 7788999876421 122222 34 34567773 34 67889999999999999
Q ss_pred cChhhhhchhhhhhhhccC-ceEEEecCCCcchhhhhh-hhhcCCC---------------ccccchhHHHHHHHHhccc
Q 030792 78 LSPKYLNKTLPDLARVASD-GVLIFAGYPGQQRAKVAE-LSKFGRP---------------AKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 78 LsprylNkTlPeLaRvs~d-giVif~g~pgq~~ak~~e-lskfgr~---------------ak~RsssWW~r~F~q~~le 140 (171)
+.+..+.+.|-++.|+-+. |.++++.... ....... +...+.| ....+..-|.+.+.++|++
T Consensus 120 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 198 (218)
T 3ou2_A 120 VPDDRFEAFWESVRSAVAPGGVVEFVDVTD-HERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWS 198 (218)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEECC-CC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEEeCCC-CccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCE
Confidence 9998889999999998765 5555554211 1111111 1111111 1133667788888888886
No 18
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.69 E-value=6.2e-08 Score=74.31 Aligned_cols=134 Identities=16% Similarity=0.196 Sum_probs=88.9
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHH-hHhc-----ceeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSL-VHKG-----IVRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksL-v~kG-----~VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.|++.....|.+.-+.+..||++++-- + ..++.. -..| -+.++|+ ..+|+...+||+|+++++|
T Consensus 84 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~-~-~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 84 AKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQ-N-KRNEEYNNQAGLADNITVKYGSF-LEIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHH-H-HHHHHHHHHHTCTTTEEEEECCT-TSCSSCTTCEEEEEEESCG
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHH-H-HHHHHHHHhcCCCcceEEEEcCc-ccCCCCCCCEeEEEecchh
Confidence 3799999999999998886646688999886432 1 222222 2233 3457788 6789999999999999999
Q ss_pred cccChhhhhchhhhhhhhcc-CceEEEecC--CCc-chhhhhh-hhhcCCCccccchhHHHHHHHHhcccc
Q 030792 76 DYLSPKYLNKTLPDLARVAS-DGVLIFAGY--PGQ-QRAKVAE-LSKFGRPAKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~-dgiVif~g~--pgq-~~ak~~e-lskfgr~ak~RsssWW~r~F~q~~lee 141 (171)
.|+.. ..+.|.++.|+-+ +|.++++.. +.. ....... ...++.+ .+.+..-|.+.+.++|++.
T Consensus 161 ~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~aGf~~ 228 (297)
T 2o57_A 161 LHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLH-DMGSLGLYRSLAKECGLVT 228 (297)
T ss_dssp GGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCS-SCCCHHHHHHHHHHTTEEE
T ss_pred hhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCC-CCCCHHHHHHHHHHCCCeE
Confidence 99976 6788999999865 566665531 111 1111111 1222222 3556677788888888753
No 19
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.69 E-value=7.8e-08 Score=69.18 Aligned_cols=131 Identities=19% Similarity=0.334 Sum_probs=86.5
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeec-CCCCCCCCcccEEEEcccccccCh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIK-FPLPYRAKSFPLVIVSDALDYLSP 80 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadik-fpLPYR~KSFslVivSDaLdyLsp 80 (171)
.+||++|.|++.....|.+. +.+..|||+.+-- -..++... .-+..+|+. +.+|+...+||+|+++++|.|+..
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~--~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~ 108 (230)
T 3cc8_A 34 KEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEA--AEQAKEKL--DHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFD 108 (230)
T ss_dssp SEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHH--HHHHHTTS--SEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSC
T ss_pred CcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHH--HHHHHHhC--CcEEEcchhhcCCCCCCCccCEEEECChhhhcCC
Confidence 37999999999999998876 6888888876421 11222211 235677774 358888899999999999999964
Q ss_pred hhhhchhhhhhhhcc-CceEEEecCCCcch-hhhhhhh--hcC---------CCccccchhHHHHHHHHhccc
Q 030792 81 KYLNKTLPDLARVAS-DGVLIFAGYPGQQR-AKVAELS--KFG---------RPAKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 81 rylNkTlPeLaRvs~-dgiVif~g~pgq~~-ak~~els--kfg---------r~ak~RsssWW~r~F~q~~le 140 (171)
. .+.|-++.|+-+ +|.++++- |.... .....+. .+. ......+...|.+.+.++|++
T Consensus 109 ~--~~~l~~~~~~L~~gG~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 178 (230)
T 3cc8_A 109 P--WAVIEKVKPYIKQNGVILASI-PNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYS 178 (230)
T ss_dssp H--HHHHHHTGGGEEEEEEEEEEE-ECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEE
T ss_pred H--HHHHHHHHHHcCCCCEEEEEe-CCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCe
Confidence 3 578888888765 55555543 33211 1111110 000 112446788899999999986
No 20
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.68 E-value=1.6e-08 Score=75.06 Aligned_cols=132 Identities=17% Similarity=0.139 Sum_probs=88.3
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHh----HhcceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV----HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv----~kG~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|.|++.....|.+. +.+..|||+++- .-..++... ..-.+.++|+ ..+|+...+||+|++++++.|
T Consensus 41 ~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 41 PVFLELGVGTGRIALPLIAR-GYRYIALDADAA--MLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp CEEEEETCTTSTTHHHHHTT-TCEEEEEESCHH--HHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCGGG
T ss_pred CEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHH--HHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCchhh
Confidence 36999999999988888754 678999988742 222333332 1224567888 678988999999999999999
Q ss_pred cChhhhhchhhhhhhhcc-CceEEEecCCCc---c----hhhhhh-hhhcCCC----ccccchhHHHHHHHHhccc
Q 030792 78 LSPKYLNKTLPDLARVAS-DGVLIFAGYPGQ---Q----RAKVAE-LSKFGRP----AKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 78 LsprylNkTlPeLaRvs~-dgiVif~g~pgq---~----~ak~~e-lskfgr~----ak~RsssWW~r~F~q~~le 140 (171)
+. ...+.+.++.|+-+ +|.++++ +++. . .....+ +..+|.| ....+..-|.+.+.++|++
T Consensus 117 ~~--~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 189 (263)
T 2yqz_A 117 VP--DWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLK 189 (263)
T ss_dssp CT--THHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred cC--CHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCC
Confidence 96 34678889999865 5666665 4433 1 111222 2345543 2344455677788888876
No 21
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.67 E-value=1.9e-07 Score=70.16 Aligned_cols=133 Identities=22% Similarity=0.295 Sum_probs=87.4
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHh-Hhc----ceeeeeecCCCCCCCCcccEEEEccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV-HKG----IVRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv-~kG----~VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
.+||++|.|++.....|.+ ...+..|||+++-- -..++... +.| .+.++|+ ..+|+...+||+|+.++++.
T Consensus 23 ~~vLDiGcG~G~~~~~l~~-~~~~v~~vD~s~~~--~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v~~~~~l~ 98 (239)
T 1xxl_A 23 HRVLDIGAGAGHTALAFSP-YVQECIGVDATKEM--VEVASSFAQEKGVENVRFQQGTA-ESLPFPDDSFDIITCRYAAH 98 (239)
T ss_dssp CEEEEESCTTSHHHHHHGG-GSSEEEEEESCHHH--HHHHHHHHHHHTCCSEEEEECBT-TBCCSCTTCEEEEEEESCGG
T ss_pred CEEEEEccCcCHHHHHHHH-hCCEEEEEECCHHH--HHHHHHHHHHcCCCCeEEEeccc-ccCCCCCCcEEEEEECCchh
Confidence 3799999999988777774 45688999886521 12222222 223 3467888 56899999999999999999
Q ss_pred ccChhhhhchhhhhhhhcc-CceEEEecCCCcchhhhhh----hhh--cCCCccccchhHHHHHHHHhccc
Q 030792 77 YLSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAE----LSK--FGRPAKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 77 yLsprylNkTlPeLaRvs~-dgiVif~g~pgq~~ak~~e----lsk--fgr~ak~RsssWW~r~F~q~~le 140 (171)
|+. ...+.|.++.|+-+ +|.++++........-... +.. -+......+..-|.+.+.++|++
T Consensus 99 ~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~ 167 (239)
T 1xxl_A 99 HFS--DVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLA 167 (239)
T ss_dssp GCS--CHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEE
T ss_pred hcc--CHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCc
Confidence 986 35688999999865 5666665422211111111 111 12224456777899999998876
No 22
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.67 E-value=4.4e-08 Score=72.06 Aligned_cols=134 Identities=16% Similarity=0.179 Sum_probs=87.1
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhc--ceeeeeecCCCCCCCCcccEEEEcccccccC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVSDALDYLS 79 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG--~VRvadikfpLPYR~KSFslVivSDaLdyLs 79 (171)
.+||++|.|++.....|.+. +.+..|||+.+- .-..|+...... -+.++|+ ..+|+...+||+|+.+++|.|+.
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEV--MIQKGKERGEGPDLSFIKGDL-SSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHT-TCEEEEEESCHH--HHHHHHTTTCBTTEEEEECBT-TBCSSCTTCEEEEEEESCTTSSS
T ss_pred CeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHH--HHHHHHhhcccCCceEEEcch-hcCCCCCCCccEEEEcChHhhcc
Confidence 37999999999988888855 678889887642 222233221111 2456787 57888899999999999999994
Q ss_pred hhhhhchhhhhhhhccC-ceEEEec-CCCcchhhhhhhhhcCCC--ccccchhHHHHHHHHhcccc
Q 030792 80 PKYLNKTLPDLARVASD-GVLIFAG-YPGQQRAKVAELSKFGRP--AKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 80 prylNkTlPeLaRvs~d-giVif~g-~pgq~~ak~~elskfgr~--ak~RsssWW~r~F~q~~lee 141 (171)
...+.|.++.|+-+. |+++++. .|........-...++.+ ....+...|.+.+.++|++.
T Consensus 131 --~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 194 (242)
T 3l8d_A 131 --EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKV 194 (242)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEE
T ss_pred --CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEE
Confidence 345789999998765 4444443 222211111111223333 23355667899999999874
No 23
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.66 E-value=1.8e-07 Score=70.48 Aligned_cols=133 Identities=14% Similarity=0.174 Sum_probs=86.9
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHh-Hhc----ceeeeeecCCCCCCCCcccEEEEccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV-HKG----IVRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv-~kG----~VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
.+||++|.|++.+...|.+. ..+..||++++- .-..++... +.| .+.++|+ ..+|+...+||+|+++.+|.
T Consensus 39 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~--~l~~a~~~~~~~~~~~v~~~~~d~-~~l~~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 39 EEVLDVATGGGHVANAFAPF-VKKVVAFDLTED--ILKVARAFIEGNGHQQVEYVQGDA-EQMPFTDERFHIVTCRIAAH 114 (260)
T ss_dssp CEEEEETCTTCHHHHHHGGG-SSEEEEEESCHH--HHHHHHHHHHHTTCCSEEEEECCC--CCCSCTTCEEEEEEESCGG
T ss_pred CEEEEEeCCCCHHHHHHHHh-CCEEEEEeCCHH--HHHHHHHHHHhcCCCceEEEEecH-HhCCCCCCCEEEEEEhhhhH
Confidence 37999999999987777754 468999988652 122233322 233 3567888 56898899999999999999
Q ss_pred ccChhhhhchhhhhhhhcc-CceEEEec--CCCcch--hhhhhhhhc--CCCccccchhHHHHHHHHhccc
Q 030792 77 YLSPKYLNKTLPDLARVAS-DGVLIFAG--YPGQQR--AKVAELSKF--GRPAKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 77 yLsprylNkTlPeLaRvs~-dgiVif~g--~pgq~~--ak~~elskf--gr~ak~RsssWW~r~F~q~~le 140 (171)
|+. ...+.|.++.|+-+ +|.++++. .|+... .-...+..+ .......+..-|.+.+.++|++
T Consensus 115 ~~~--d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 183 (260)
T 1vl5_A 115 HFP--NPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFE 183 (260)
T ss_dssp GCS--CHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCE
T ss_pred hcC--CHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCe
Confidence 996 34588999999865 56777653 444310 111111111 1123455667788888888765
No 24
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.66 E-value=1.1e-07 Score=72.48 Aligned_cols=134 Identities=10% Similarity=0.072 Sum_probs=88.5
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-hc-----ceeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KG-----IVRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-kG-----~VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.|++.....|.+.-+.+..||++++- .-..++..++ .| -+..+|+ .++| .+||+|+++++|
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~--~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~---~~fD~v~~~~~l 139 (287)
T 1kpg_A 66 MTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKN--QANHVQQLVANSENLRSKRVLLAGW-EQFD---EPVDRIVSIGAF 139 (287)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCCEEEEEESCHH--HHHHHHHHHHTCCCCSCEEEEESCG-GGCC---CCCSEEEEESCG
T ss_pred CEEEEECCcccHHHHHHHHHcCCEEEEEECCHH--HHHHHHHHHHhcCCCCCeEEEECCh-hhCC---CCeeEEEEeCch
Confidence 379999999999998888666778999987642 2223333332 22 3456788 5777 899999999999
Q ss_pred cccChhhhhchhhhhhhhccC-ceEEEecC--CCcch-------------hhhhhhhhcCCC-ccccchhHHHHHHHHhc
Q 030792 76 DYLSPKYLNKTLPDLARVASD-GVLIFAGY--PGQQR-------------AKVAELSKFGRP-AKMRSSSWWIRYFVQTS 138 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~d-giVif~g~--pgq~~-------------ak~~elskfgr~-ak~RsssWW~r~F~q~~ 138 (171)
+|+.++...+.|.++.|+-+. |.+++... +.... .-..-+.+.--| ..+.+..-|.+.+.++|
T Consensus 140 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aG 219 (287)
T 1kpg_A 140 EHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANG 219 (287)
T ss_dssp GGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTT
T ss_pred hhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCC
Confidence 999988899999999998664 55555431 11110 000001111111 13457778888888888
Q ss_pred ccc
Q 030792 139 LEE 141 (171)
Q Consensus 139 lee 141 (171)
++.
T Consensus 220 f~~ 222 (287)
T 1kpg_A 220 FTV 222 (287)
T ss_dssp CEE
T ss_pred cEE
Confidence 763
No 25
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.63 E-value=1.9e-07 Score=68.82 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=72.5
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhH---hcceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH---KGIVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~---kG~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|.|++.....|.+.- +.+..|||+++- .-..|+.... +-.+..+|+ ..+|.. .+||+|+++++|.|
T Consensus 46 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~~~d~-~~~~~~-~~fD~v~~~~~l~~ 121 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEK--MLEIAKNRFRGNLKVKYIEADY-SKYDFE-EKYDMVVSALSIHH 121 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHH--HHHHHHHHTCSCTTEEEEESCT-TTCCCC-SCEEEEEEESCGGG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHH--HHHHHHHhhccCCCEEEEeCch-hccCCC-CCceEEEEeCcccc
Confidence 379999999999988888654 678899988652 2223333332 223556777 566666 89999999999999
Q ss_pred cChhhhhchhhhhhhhcc-CceEEEec
Q 030792 78 LSPKYLNKTLPDLARVAS-DGVLIFAG 103 (171)
Q Consensus 78 LsprylNkTlPeLaRvs~-dgiVif~g 103 (171)
+++......|-++.|+-+ +|.++++-
T Consensus 122 ~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 122 LEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 988887789999999765 56666544
No 26
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.63 E-value=2.1e-08 Score=74.96 Aligned_cols=96 Identities=15% Similarity=0.147 Sum_probs=71.8
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH--hcceeeeeecCCCCCCCCcccEEEEcccccccC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 79 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~--kG~VRvadikfpLPYR~KSFslVivSDaLdyLs 79 (171)
.+||++|.|++.....|.+....+..|||+++- .-..|+.... .-.+.++|+ ..+|+...+||+|+++++|.|+
T Consensus 46 ~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~- 121 (253)
T 3g5l_A 46 KTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSER--MLTEAKRKTTSPVVCYEQKAI-EDIAIEPDAYNVVLSSLALHYI- 121 (253)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEEESCHH--HHHHHHHHCCCTTEEEEECCG-GGCCCCTTCEEEEEEESCGGGC-
T ss_pred CEEEEECCCCCHHHHHHHHcCCCEEEEEECCHH--HHHHHHHhhccCCeEEEEcch-hhCCCCCCCeEEEEEchhhhhh-
Confidence 379999999999988888765558899988642 2233444332 224567888 5788889999999999999999
Q ss_pred hhhhhchhhhhhhhcc-CceEEEe
Q 030792 80 PKYLNKTLPDLARVAS-DGVLIFA 102 (171)
Q Consensus 80 prylNkTlPeLaRvs~-dgiVif~ 102 (171)
..+.+.|-++.|+-+ +|.++++
T Consensus 122 -~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 122 -ASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp -SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred -hhHHHHHHHHHHHcCCCcEEEEE
Confidence 446788999999765 5666654
No 27
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.62 E-value=1.1e-07 Score=69.15 Aligned_cols=130 Identities=18% Similarity=0.148 Sum_probs=88.2
Q ss_pred ccceeecCCchhHhHhhhhcc--cccccccccccc--cchhHHHHHHh-HhcceeeeeecCCCCCCCCcccEEEEccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYDI--EDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee--~teAWGVEPyd~--~d~d~~CksLv-~kG~VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
.+||++|.|++.....|.+.. +.+..|||+++- +.+..++...- ..--+..+|+ ..+|+...+||+|+.++++.
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~ 117 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-NKIPLPDNTVDFIFMAFTFH 117 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT-TBCSSCSSCEEEEEEESCGG
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc-ccCCCCCCCeeEEEeehhhh
Confidence 379999999999988888764 478999998652 22222222211 1123566787 67888899999999999999
Q ss_pred ccChhhhhchhhhhhhhcc-CceEEEecCCCcchhhhhhhhhcCCC-ccccchhHHHHHHHHhcccc
Q 030792 77 YLSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRP-AKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 77 yLsprylNkTlPeLaRvs~-dgiVif~g~pgq~~ak~~elskfgr~-ak~RsssWW~r~F~q~~lee 141 (171)
|+. ...+.|.++.|+-+ +|.++++..-.... .++.+ ....+..-|.+.+.++|++.
T Consensus 118 ~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~Gf~~ 175 (219)
T 3dh0_A 118 ELS--EPLKFLEELKRVAKPFAYLAIIDWKKEER-------DKGPPPEEVYSEWEVGLILEDAGIRV 175 (219)
T ss_dssp GCS--SHHHHHHHHHHHEEEEEEEEEEEECSSCC-------SSSCCGGGSCCHHHHHHHHHHTTCEE
T ss_pred hcC--CHHHHHHHHHHHhCCCeEEEEEEeccccc-------ccCCchhcccCHHHHHHHHHHCCCEE
Confidence 995 45678889988765 56777665222211 11111 12346678899999999873
No 28
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.61 E-value=1.5e-07 Score=72.04 Aligned_cols=132 Identities=11% Similarity=0.099 Sum_probs=87.9
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHh-Hhcc-----eeeeeecCCCC-CCCCcccEEEEcccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV-HKGI-----VRVADIKFPLP-YRAKSFPLVIVSDAL 75 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv-~kG~-----VRvadikfpLP-YR~KSFslVivSDaL 75 (171)
+||++|.|++.....|.+. +.+..|||+++- .-..++... ..|+ +..+|+ ..+| +...+||+|+++++|
T Consensus 71 ~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~--~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 71 RVLDAGGGEGQTAIKMAER-GHQVILCDLSAQ--MIDRAKQAAEAKGVSDNMQFIHCAA-QDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp EEEEETCTTCHHHHHHHHT-TCEEEEEESCHH--HHHHHHHHHHC-CCGGGEEEEESCG-GGTGGGCSSCEEEEEEESCG
T ss_pred EEEEeCCcchHHHHHHHHC-CCEEEEEECCHH--HHHHHHHHHHhcCCCcceEEEEcCH-HHhhhhcCCCceEEEECchh
Confidence 7999999999988888865 778999998752 222333332 2333 567888 4455 888999999999999
Q ss_pred cccChhhhhchhhhhhhhccCceEEEecCCCcchhhhh--------hhhh--------cCCCccccchhHHHHHHHHhcc
Q 030792 76 DYLSPKYLNKTLPDLARVASDGVLIFAGYPGQQRAKVA--------ELSK--------FGRPAKMRSSSWWIRYFVQTSL 139 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~dgiVif~g~pgq~~ak~~--------elsk--------fgr~ak~RsssWW~r~F~q~~l 139 (171)
+|+.. ..+.|.++.|+-+.|=++++..|.....-.. .+.. ...+....+...|.+.+.++|+
T Consensus 147 ~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 224 (285)
T 4htf_A 147 EWVAD--PRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGW 224 (285)
T ss_dssp GGCSC--HHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTC
T ss_pred hcccC--HHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCC
Confidence 99953 3688999999877654444443332211100 0000 1122355677899999999998
Q ss_pred c
Q 030792 140 E 140 (171)
Q Consensus 140 e 140 (171)
+
T Consensus 225 ~ 225 (285)
T 4htf_A 225 Q 225 (285)
T ss_dssp E
T ss_pred c
Confidence 7
No 29
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.61 E-value=2.1e-07 Score=71.25 Aligned_cols=133 Identities=13% Similarity=0.158 Sum_probs=88.8
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccChh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 81 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLspr 81 (171)
.+||++|.|++.....|.+ .+.+..||++++-- -..++.....-.+.++|+ ..+|+ ..+||+|+++.+|.|+.
T Consensus 59 ~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~--~~~a~~~~~~~~~~~~d~-~~~~~-~~~fD~v~~~~~l~~~~-- 131 (279)
T 3ccf_A 59 EFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATM--IEKARQNYPHLHFDVADA-RNFRV-DKPLDAVFSNAMLHWVK-- 131 (279)
T ss_dssp CEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHH--HHHHHHHCTTSCEEECCT-TTCCC-SSCEEEEEEESCGGGCS--
T ss_pred CEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHH--HHHHHhhCCCCEEEECCh-hhCCc-CCCcCEEEEcchhhhCc--
Confidence 3799999999999888886 77889999986421 122222223445778888 45887 68999999999999986
Q ss_pred hhhchhhhhhhhccC-ceEEEec-CCCcc---hhhhh-hhhhcC-------CCccccchhHHHHHHHHhcccc
Q 030792 82 YLNKTLPDLARVASD-GVLIFAG-YPGQQ---RAKVA-ELSKFG-------RPAKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 82 ylNkTlPeLaRvs~d-giVif~g-~pgq~---~ak~~-elskfg-------r~ak~RsssWW~r~F~q~~lee 141 (171)
...+.|.++.|+-+. |.++++- .++.. ..... .+.+.| .|....+...|.+.+.++|++.
T Consensus 132 d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 204 (279)
T 3ccf_A 132 EPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDV 204 (279)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEE
T ss_pred CHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEE
Confidence 345789999998775 5555432 22221 01111 122223 3445667788899999888753
No 30
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.59 E-value=2.1e-07 Score=70.18 Aligned_cols=99 Identities=16% Similarity=0.214 Sum_probs=73.2
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-hc-----ceeeeeecCCCCC-CCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KG-----IVRVADIKFPLPY-RAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-kG-----~VRvadikfpLPY-R~KSFslVivSDa 74 (171)
.+||++|.|++.....|.+....+..|||+++-- -..|+.... .| -+.++|+ ..+|+ ...+||+|+++++
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~--~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVS--INDARVRARNMKRRFKVFFRAQDS-YGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHH--HHHHHHHHHTSCCSSEEEEEESCT-TTSCCCCSSCEEEEEEESC
T ss_pred CeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHH--HHHHHHHHHhcCCCccEEEEECCc-cccccCCCCCcCEEEECch
Confidence 3799999999998888887655689999987532 223333333 23 3567787 56677 6889999999999
Q ss_pred ccc--cChhhhhchhhhhhhhccC-ceEEEec
Q 030792 75 LDY--LSPKYLNKTLPDLARVASD-GVLIFAG 103 (171)
Q Consensus 75 Ldy--LsprylNkTlPeLaRvs~d-giVif~g 103 (171)
|.| .++..+.+.|-++.|+-+. |.++++.
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 998 6788899999999998765 5555443
No 31
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.58 E-value=6.8e-08 Score=73.74 Aligned_cols=129 Identities=14% Similarity=0.066 Sum_probs=85.2
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccChh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 81 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLspr 81 (171)
.+||++|.||+.....|.+ .+.+..||++++.- .+ .|+... .--+.++|+ ..+|+...+||+|+++.+|.|+ .
T Consensus 36 ~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~-~~-~a~~~~-~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~--~ 108 (261)
T 3ege_A 36 SVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVM-RQ-QAVVHP-QVEWFTGYA-ENLALPDKSVDGVISILAIHHF--S 108 (261)
T ss_dssp CEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHH-HH-SSCCCT-TEEEECCCT-TSCCSCTTCBSEEEEESCGGGC--S
T ss_pred CEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHH-HH-HHHhcc-CCEEEECch-hhCCCCCCCEeEEEEcchHhhc--c
Confidence 4799999999998888885 67899999987621 11 111111 234567888 5789999999999999999999 4
Q ss_pred hhhchhhhhhhhccCc-eEEEecCCCcchhh-----hhhh-hhcCCCccccchhHHHHHHHHhccc
Q 030792 82 YLNKTLPDLARVASDG-VLIFAGYPGQQRAK-----VAEL-SKFGRPAKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 82 ylNkTlPeLaRvs~dg-iVif~g~pgq~~ak-----~~el-skfgr~ak~RsssWW~r~F~q~~le 140 (171)
...+.|-++.|+-++| ++|+.-.|...... ..++ ...+ ....+..++. .+.++|++
T Consensus 109 ~~~~~l~~~~~~LkgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~l~~aGF~ 171 (261)
T 3ege_A 109 HLEKSFQEMQRIIRDGTIVLLTFDIRLAQRIWLYDYFPFLWEDAL--RFLPLDEQIN-LLQENTKR 171 (261)
T ss_dssp SHHHHHHHHHHHBCSSCEEEEEECGGGCCCCGGGGTCHHHHHHHH--TSCCHHHHHH-HHHHHHCS
T ss_pred CHHHHHHHHHHHhCCcEEEEEEcCCchhHHHHHHHHHHHHhhhhh--hhCCCHHHHH-HHHHcCCC
Confidence 5678899999998876 44444443322110 1111 1111 2245566677 77777774
No 32
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.58 E-value=3.4e-07 Score=71.30 Aligned_cols=135 Identities=9% Similarity=0.123 Sum_probs=89.2
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHh-c-----ceeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G-----IVRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~k-G-----~VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.|++.....|.+.-+.+..||++++-- -..++....+ | -+..+|+ ..+| .+||+|+.+++|
T Consensus 92 ~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~--~~~a~~~~~~~~~~~~v~~~~~d~-~~~~---~~fD~v~~~~~l 165 (318)
T 2fk8_A 92 MTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQ--HARCEQVLASIDTNRSRQVLLQGW-EDFA---EPVDRIVSIEAF 165 (318)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHH--HHHHHHHHHTSCCSSCEEEEESCG-GGCC---CCCSEEEEESCG
T ss_pred CEEEEEcccchHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCCCceEEEECCh-HHCC---CCcCEEEEeChH
Confidence 3799999999988888886546688999876422 2233333332 3 2456777 5566 789999999999
Q ss_pred cccChhhhhchhhhhhhhcc-CceEEEec-CCCcchhh--------------hhhhhhcCCC-ccccchhHHHHHHHHhc
Q 030792 76 DYLSPKYLNKTLPDLARVAS-DGVLIFAG-YPGQQRAK--------------VAELSKFGRP-AKMRSSSWWIRYFVQTS 138 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~-dgiVif~g-~pgq~~ak--------------~~elskfgr~-ak~RsssWW~r~F~q~~ 138 (171)
+|+.+....+.+.++.|+-+ +|.++++. .+...... ..-+.+.--| ..+.+..-|.+.+.++|
T Consensus 166 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aG 245 (318)
T 2fk8_A 166 EHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAG 245 (318)
T ss_dssp GGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTT
T ss_pred HhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCC
Confidence 99999899999999999765 45555543 22111110 0111111111 24567888999999999
Q ss_pred cccc
Q 030792 139 LEEN 142 (171)
Q Consensus 139 leeN 142 (171)
++.-
T Consensus 246 f~~~ 249 (318)
T 2fk8_A 246 FTVP 249 (318)
T ss_dssp CBCC
T ss_pred CEEE
Confidence 8643
No 33
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.57 E-value=2.9e-07 Score=68.40 Aligned_cols=97 Identities=12% Similarity=0.142 Sum_probs=68.1
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHh--HhcceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv--~kG~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|.|++.+...|.+.-+.+..||++++- +.+..+++..- ..--+.++|+ ..+|+ ..+||+|++++++.|
T Consensus 38 ~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~-~~~~~-~~~fD~V~~~~~~~~ 115 (256)
T 1nkv_A 38 TRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA-AGYVA-NEKCDVAACVGATWI 115 (256)
T ss_dssp CEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC-TTCCC-SSCEEEEEEESCGGG
T ss_pred CEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh-HhCCc-CCCCCEEEECCChHh
Confidence 369999999999888888665668899988652 22322322210 0123567888 56777 899999999999999
Q ss_pred cChhhhhchhhhhhhhccC-ceEEEe
Q 030792 78 LSPKYLNKTLPDLARVASD-GVLIFA 102 (171)
Q Consensus 78 LsprylNkTlPeLaRvs~d-giVif~ 102 (171)
+. ...+.|.++.|+-+. |.++++
T Consensus 116 ~~--~~~~~l~~~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 116 AG--GFAGAEELLAQSLKPGGIMLIG 139 (256)
T ss_dssp TS--SSHHHHHHHTTSEEEEEEEEEE
T ss_pred cC--CHHHHHHHHHHHcCCCeEEEEe
Confidence 86 356778899998765 455543
No 34
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.56 E-value=5.4e-07 Score=65.34 Aligned_cols=95 Identities=12% Similarity=0.099 Sum_probs=66.9
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-hcceeeeeecCCCCCCCCcccEEEEcccccccCh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 80 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-kG~VRvadikfpLPYR~KSFslVivSDaLdyLsp 80 (171)
.+||++|.|++.....|.+ ...+..||++++- .-..++.... .--+.++|+.- + .-+.+||+|+++++|+|+..
T Consensus 44 ~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~--~~~~a~~~~~~~v~~~~~d~~~-~-~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQE-HFNDITCVEASEE--AISHAQGRLKDGITYIHSRFED-A-QLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp SCEEEESCTTSHHHHHHTT-TCSCEEEEESCHH--HHHHHHHHSCSCEEEEESCGGG-C-CCSSCEEEEEEESCGGGCSS
T ss_pred CcEEEECCCCCHHHHHHHH-hCCcEEEEeCCHH--HHHHHHHhhhCCeEEEEccHHH-c-CcCCcccEEEEhhHHHhhcC
Confidence 3699999999998888775 4568899988753 2233333333 23456677743 3 35789999999999999953
Q ss_pred hhhhchhhhhh-hhccC-ceEEEec
Q 030792 81 KYLNKTLPDLA-RVASD-GVLIFAG 103 (171)
Q Consensus 81 rylNkTlPeLa-Rvs~d-giVif~g 103 (171)
..+.|-++. |+-+. |.++++.
T Consensus 119 --~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 119 --PVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp --HHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --HHHHHHHHHHHhcCCCCEEEEEc
Confidence 368899999 88664 5555544
No 35
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.55 E-value=3.1e-07 Score=69.65 Aligned_cols=132 Identities=11% Similarity=0.129 Sum_probs=87.1
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccccc--chhHHHHHHh--HhcceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIE--DADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~--d~d~~CksLv--~kG~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|.|++.....|.+....+..|||+++-- -+..+++..- .+--+.++|+ ..+|+...+||+|+++.++.+
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~~~~~ 126 (267)
T 3kkz_A 48 SLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEGAIYN 126 (267)
T ss_dssp CEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESSCGGG
T ss_pred CEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcCCcee
Confidence 3799999999999999998766699999987542 2333332221 1123567888 778888999999999999999
Q ss_pred cChhhhhchhhhhhhhccC-ceEEEecC---CCcchhhhhhh--hhcCCCccccchhHHHHHHHHhccc
Q 030792 78 LSPKYLNKTLPDLARVASD-GVLIFAGY---PGQQRAKVAEL--SKFGRPAKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 78 LsprylNkTlPeLaRvs~d-giVif~g~---pgq~~ak~~el--skfgr~ak~RsssWW~r~F~q~~le 140 (171)
+.+ .+.|-++.|+-+. |.++++.. +........+. ..+. .+.+...|.+.+.++|++
T Consensus 127 ~~~---~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~aGf~ 189 (267)
T 3kkz_A 127 IGF---ERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYP---EIDTIPNQVAKIHKAGYL 189 (267)
T ss_dssp TCH---HHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCT---TCEEHHHHHHHHHHTTEE
T ss_pred cCH---HHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCC---CCCCHHHHHHHHHHCCCE
Confidence 954 5678888887654 55555431 11111122211 1121 356677778888888766
No 36
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.55 E-value=8.5e-08 Score=74.33 Aligned_cols=98 Identities=13% Similarity=0.104 Sum_probs=72.3
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHh-Hhc-------ceeeeeecCCCCCCCCcccEEEEc-c
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV-HKG-------IVRVADIKFPLPYRAKSFPLVIVS-D 73 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv-~kG-------~VRvadikfpLPYR~KSFslVivS-D 73 (171)
+||++|.|++.....|.+. +.+..|||+++- .-..|+... ..| -+.++|+ ..+|+ ..+||+||.+ .
T Consensus 85 ~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~--~~~~a~~~~~~~~~~~~~~v~~~~~d~-~~~~~-~~~fD~v~~~~~ 159 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDL-GWEVTALELSTS--VLAAFRKRLAEAPADVRDRCTLVQGDM-SAFAL-DKRFGTVVISSG 159 (299)
T ss_dssp CEEEETCTTTTTHHHHHTT-TCCEEEEESCHH--HHHHHHHHHHTSCHHHHTTEEEEECBT-TBCCC-SCCEEEEEECHH
T ss_pred cEEEEeccCCHHHHHHHHc-CCeEEEEECCHH--HHHHHHHHHhhcccccccceEEEeCch-hcCCc-CCCcCEEEECCc
Confidence 7999999999998888865 678899988742 222333322 233 3678898 56787 7899999965 8
Q ss_pred cccccChhhhhchhhhhhhhccCceEEEecCC
Q 030792 74 ALDYLSPKYLNKTLPDLARVASDGVLIFAGYP 105 (171)
Q Consensus 74 aLdyLsprylNkTlPeLaRvs~dgiVif~g~p 105 (171)
++.|+++..+.+.|.++.|+-+.|=++++..|
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 89999999999999999998765433333333
No 37
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.53 E-value=1.4e-07 Score=69.06 Aligned_cols=96 Identities=18% Similarity=0.186 Sum_probs=68.7
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHh--cceeeeeecCCCCCCCCcccEEEEcccccccC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 79 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~k--G~VRvadikfpLPYR~KSFslVivSDaLdyLs 79 (171)
.+||++|.|++.+...|.+....+..|||+.+- .-..++..... --+..+|+ ..+|+...+||+|+++++|.|+.
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~ 121 (243)
T 3bkw_A 45 LRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEK--MLARARAAGPDTGITYERADL-DKLHLPQDSFDLAYSSLALHYVE 121 (243)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEEESCHH--HHHHHHHTSCSSSEEEEECCG-GGCCCCTTCEEEEEEESCGGGCS
T ss_pred CEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHH--HHHHHHHhcccCCceEEEcCh-hhccCCCCCceEEEEeccccccc
Confidence 379999999999988888664448899987632 22233333322 23556787 55788889999999999999995
Q ss_pred hhhhhchhhhhhhhcc-CceEEEe
Q 030792 80 PKYLNKTLPDLARVAS-DGVLIFA 102 (171)
Q Consensus 80 prylNkTlPeLaRvs~-dgiVif~ 102 (171)
...+.|-++.|+-+ +|.++++
T Consensus 122 --~~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 122 --DVARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEE
T ss_pred --hHHHHHHHHHHhcCcCcEEEEE
Confidence 46688889888765 4555554
No 38
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.52 E-value=2.9e-07 Score=65.28 Aligned_cols=97 Identities=14% Similarity=0.229 Sum_probs=72.3
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHh-Hhc----ceeeeeecCCCCCCCCcccEEEEccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV-HKG----IVRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv-~kG----~VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
.+||++|.|++.....|.+. +.+..|||+.+- +-..++... +.| -+..+|+ ..+|+ ..+||+|+.++++.
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAM--SIANVERIKSIENLDNLHTRVVDL-NNLTF-DRQYDFILSTVVLM 108 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHT-TCEEEEEESCHH--HHHHHHHHHHHHTCTTEEEEECCG-GGCCC-CCCEEEEEEESCGG
T ss_pred CeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHH--HHHHHHHHHHhCCCCCcEEEEcch-hhCCC-CCCceEEEEcchhh
Confidence 37999999999988888865 678899987652 122233322 223 3566787 55777 89999999999999
Q ss_pred ccChhhhhchhhhhhhhcc-CceEEEec
Q 030792 77 YLSPKYLNKTLPDLARVAS-DGVLIFAG 103 (171)
Q Consensus 77 yLsprylNkTlPeLaRvs~-dgiVif~g 103 (171)
|+++....+.+.++.|+-+ +|.++++.
T Consensus 109 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 109 FLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9999999999999999865 56655544
No 39
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.51 E-value=3.2e-07 Score=71.98 Aligned_cols=134 Identities=13% Similarity=0.147 Sum_probs=90.3
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhH--hcceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~--kG~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|.|++.....|.+.-+.+..|||+.+- +.+..+++..-- +--+.++|+ ..+|+...+||+|+..++++|
T Consensus 119 ~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V~~~~~l~~ 197 (312)
T 3vc1_A 119 DTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM-LDTPFDKGAVTASWNNESTMY 197 (312)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEEESCGGG
T ss_pred CEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh-hcCCCCCCCEeEEEECCchhh
Confidence 379999999999888887654678999987642 333333333211 123567888 678998999999999999999
Q ss_pred cChhhhhchhhhhhhhcc-CceEEEecC-CC----cchhhhhhhhhcCCCccccchhHHHHHHHHhccc
Q 030792 78 LSPKYLNKTLPDLARVAS-DGVLIFAGY-PG----QQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 78 LsprylNkTlPeLaRvs~-dgiVif~g~-pg----q~~ak~~elskfgr~ak~RsssWW~r~F~q~~le 140 (171)
+. ..+.|.++.|+-+ +|.++++.. +. ........+.....+ .+.+..-|.+.+.++|++
T Consensus 198 ~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~l~~aGf~ 262 (312)
T 3vc1_A 198 VD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFEC-NIHSRREYLRAMADNRLV 262 (312)
T ss_dssp SC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTC-CCCBHHHHHHHHHTTTEE
T ss_pred CC---HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcC-CCCCHHHHHHHHHHCCCE
Confidence 94 7888999998765 455555541 11 111222222221112 367788888999998886
No 40
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.49 E-value=1.5e-06 Score=65.45 Aligned_cols=137 Identities=9% Similarity=0.061 Sum_probs=85.5
Q ss_pred ccceeecCCchhHhHhhhhccc--ccccccccccc-----cchhHHHHHHh-Hhc---c--eeeee-e-cCCCCCCCCcc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE--TEAWGVEPYDI-----EDADARCKSLV-HKG---I--VRVAD-I-KFPLPYRAKSF 66 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~--teAWGVEPyd~-----~d~d~~CksLv-~kG---~--VRvad-i-kfpLPYR~KSF 66 (171)
.+||+||.|++.....|.+.-+ .+.-||++++- +-.+ .++..+ ..| . +..+| + ...+|+...+|
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~-~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~f 123 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLG-QAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHF 123 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHH-HHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCC
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHH-HHHHHHHhcCCCCceEEEECChhhhccCCCCCCCE
Confidence 3799999999999998887633 78999999873 1122 233322 222 2 34555 3 25678889999
Q ss_pred cEEEEcccccccChhhhhchhhhhhhhcc-CceEEEec--CCCcchhhhhh----hh-----hc-----CCCccccchhH
Q 030792 67 PLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG--YPGQQRAKVAE----LS-----KF-----GRPAKMRSSSW 129 (171)
Q Consensus 67 slVivSDaLdyLsprylNkTlPeLaRvs~-dgiVif~g--~pgq~~ak~~e----ls-----kf-----gr~ak~RsssW 129 (171)
|+|+++++|.|+.... ..+-.+.++-. +|.++++- .++........ +. .+ +....+.+..-
T Consensus 124 D~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 201 (275)
T 3bkx_A 124 DRVVLAHSLWYFASAN--ALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLITPDT 201 (275)
T ss_dssp SEEEEESCGGGSSCHH--HHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHH
T ss_pred EEEEEccchhhCCCHH--HHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccccccCCHHH
Confidence 9999999999997542 34445556666 78888764 22221111111 11 11 11224567778
Q ss_pred HHHHHHHhcccc
Q 030792 130 WIRYFVQTSLEE 141 (171)
Q Consensus 130 W~r~F~q~~lee 141 (171)
|.+.+.++|++.
T Consensus 202 l~~~l~~aGf~~ 213 (275)
T 3bkx_A 202 LAQIAHDNTWTY 213 (275)
T ss_dssp HHHHHHHHTCEE
T ss_pred HHHHHHHCCCee
Confidence 888888888764
No 41
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.48 E-value=6.2e-07 Score=66.32 Aligned_cols=128 Identities=18% Similarity=0.215 Sum_probs=83.4
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccChh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 81 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLspr 81 (171)
.+||++|.|++.....|.+. .|||+.+-- -..|+.. .--+..+|+ ..+|+...+||+|+++++|.|+.
T Consensus 49 ~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~--~~~a~~~--~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~-- 116 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKIK-----IGVEPSERM--AEIARKR--GVFVLKGTA-ENLPLKDESFDFALMVTTICFVD-- 116 (219)
T ss_dssp SCEEEETCTTSTTHHHHTCC-----EEEESCHHH--HHHHHHT--TCEEEECBT-TBCCSCTTCEEEEEEESCGGGSS--
T ss_pred CcEEEeCCCCCHHHHHHHHH-----hccCCCHHH--HHHHHhc--CCEEEEccc-ccCCCCCCCeeEEEEcchHhhcc--
Confidence 47999999999998888754 788775421 1222222 234556777 56888888999999999999994
Q ss_pred hhhchhhhhhhhccC-ceEEEecCCCc-chhhhh-hh---hhcCCCccccchhHHHHHHHHhcccc
Q 030792 82 YLNKTLPDLARVASD-GVLIFAGYPGQ-QRAKVA-EL---SKFGRPAKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 82 ylNkTlPeLaRvs~d-giVif~g~pgq-~~ak~~-el---skfgr~ak~RsssWW~r~F~q~~lee 141 (171)
...+.|.++.|+-+. |.++++..+.. ...... .+ ..+.......+..-|.+.+.++|++.
T Consensus 117 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 182 (219)
T 1vlm_A 117 DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEE 182 (219)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeE
Confidence 345788888888654 55555543221 111111 11 12223345567788899999998864
No 42
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.47 E-value=2.2e-07 Score=68.97 Aligned_cols=132 Identities=13% Similarity=0.050 Sum_probs=86.1
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhc---------------------------------
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG--------------------------------- 48 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG--------------------------------- 48 (171)
.+||++|.|++.....|.+....+..||++++- .-..++...+..
T Consensus 58 ~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~--~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (265)
T 2i62_A 58 ELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQ--NLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRA 135 (265)
T ss_dssp EEEEEESCTTCCGGGTTGGGTEEEEEEEESCHH--HHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred CEEEEECCCccHHHHHHhhcccCeEEEecCCHH--HHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhh
Confidence 369999999976655555443348889887652 112222222221
Q ss_pred --ceeeeeecCCCCCCC---CcccEEEEcccccccChh--hhhchhhhhhhhcc-CceEEEecCCCcchhhhhhhhhcCC
Q 030792 49 --IVRVADIKFPLPYRA---KSFPLVIVSDALDYLSPK--YLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGR 120 (171)
Q Consensus 49 --~VRvadikfpLPYR~---KSFslVivSDaLdyLspr--ylNkTlPeLaRvs~-dgiVif~g~pgq~~ak~~elskfgr 120 (171)
-+.++|+.-..|..+ .+||+||.+.+|.++.|. ...+.|.++.|+-+ .|.+|++...+.. ....|.
T Consensus 136 v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~------~~~~~~ 209 (265)
T 2i62_A 136 IKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS------YYMIGE 209 (265)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC------EEEETT
T ss_pred heeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc------eEEcCC
Confidence 356788866556555 899999999999988776 77888999998754 6677777643321 111121
Q ss_pred ---CccccchhHHHHHHHHhcccc
Q 030792 121 ---PAKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 121 ---~ak~RsssWW~r~F~q~~lee 141 (171)
.....+...|.+.|.++|++.
T Consensus 210 ~~~~~~~~~~~~~~~~l~~aGf~~ 233 (265)
T 2i62_A 210 QKFSSLPLGWETVRDAVEEAGYTI 233 (265)
T ss_dssp EEEECCCCCHHHHHHHHHHTTCEE
T ss_pred ccccccccCHHHHHHHHHHCCCEE
Confidence 112234558999999999864
No 43
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.47 E-value=3.1e-07 Score=66.92 Aligned_cols=100 Identities=16% Similarity=0.227 Sum_probs=72.9
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHh-c--ceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G--IVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~k-G--~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
.+||++|.|++.....|.+. ..+..|||+.+- +-..|+..... + -+..+|+ ..+| -..+||+|+++++|.|+
T Consensus 53 ~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~ 127 (216)
T 3ofk_A 53 SNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPR--AIGRACQRTKRWSHISWAATDI-LQFS-TAELFDLIVVAEVLYYL 127 (216)
T ss_dssp EEEEEECCTTSHHHHHHGGG-EEEEEEEESCHH--HHHHHHHHTTTCSSEEEEECCT-TTCC-CSCCEEEEEEESCGGGS
T ss_pred CcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHH--HHHHHHHhcccCCCeEEEEcch-hhCC-CCCCccEEEEccHHHhC
Confidence 37999999999988888754 578999988652 23334443332 2 4567787 4555 47899999999999999
Q ss_pred C-hhhhhchhhhhhhhccCceEEEecCCC
Q 030792 79 S-PKYLNKTLPDLARVASDGVLIFAGYPG 106 (171)
Q Consensus 79 s-prylNkTlPeLaRvs~dgiVif~g~pg 106 (171)
. |..+.+.|.++.|+-+.|=+++++.|.
T Consensus 128 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 128 EDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp SSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 8 688889999999987765444444443
No 44
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.46 E-value=9.3e-07 Score=68.57 Aligned_cols=133 Identities=13% Similarity=0.142 Sum_probs=89.2
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-hcc-----eeeeeecCCCCCCCCcccEEEEccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI-----VRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-kG~-----VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
+||++|.|++.....|.+.-+.+..||++++-- -..++...+ .|+ +..+|+ .++ ..+||+|++..+++
T Consensus 75 ~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~--~~~a~~~~~~~~~~~~v~~~~~d~-~~~---~~~fD~v~~~~~~~ 148 (302)
T 3hem_A 75 TLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQ--YAHDKAMFDEVDSPRRKEVRIQGW-EEF---DEPVDRIVSLGAFE 148 (302)
T ss_dssp EEEEETCTTSHHHHHHHHHHCCEEEEEECCHHH--HHHHHHHHHHSCCSSCEEEEECCG-GGC---CCCCSEEEEESCGG
T ss_pred EEEEeeccCcHHHHHHHHhCCCEEEEEECCHHH--HHHHHHHHHhcCCCCceEEEECCH-HHc---CCCccEEEEcchHH
Confidence 799999999999988887646889999886422 222333332 242 566777 344 79999999999999
Q ss_pred cc-------Chhhhhchhhhhhhhcc-CceEEEecC--CCcchhhh-------------hhhhhcCCC-ccccchhHHHH
Q 030792 77 YL-------SPKYLNKTLPDLARVAS-DGVLIFAGY--PGQQRAKV-------------AELSKFGRP-AKMRSSSWWIR 132 (171)
Q Consensus 77 yL-------sprylNkTlPeLaRvs~-dgiVif~g~--pgq~~ak~-------------~elskfgr~-ak~RsssWW~r 132 (171)
|+ .++.+.+.+.++.|+-+ +|.+++... +....... .-+.++--| ..+.+...|.+
T Consensus 149 ~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~ 228 (302)
T 3hem_A 149 HFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDY 228 (302)
T ss_dssp GTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHH
T ss_pred hcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHH
Confidence 99 77888999999999765 566665552 22211100 112222222 24677788889
Q ss_pred HHHHhcccc
Q 030792 133 YFVQTSLEE 141 (171)
Q Consensus 133 ~F~q~~lee 141 (171)
.+.++|++.
T Consensus 229 ~l~~aGf~~ 237 (302)
T 3hem_A 229 YSSNAGWKV 237 (302)
T ss_dssp HHHHHTCEE
T ss_pred HHHhCCcEE
Confidence 999888753
No 45
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.46 E-value=6.8e-07 Score=64.87 Aligned_cols=126 Identities=21% Similarity=0.212 Sum_probs=80.6
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccChh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 81 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLspr 81 (171)
.+||++|.|++.....| ...+..|||+.+- .-..|+.....-.+..+|+ ..+|+...+||+|+.+++|+|+.
T Consensus 38 ~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~-- 109 (211)
T 2gs9_A 38 ESLLEVGAGTGYWLRRL---PYPQKVGVEPSEA--MLAVGRRRAPEATWVRAWG-EALPFPGESFDVVLLFTTLEFVE-- 109 (211)
T ss_dssp SEEEEETCTTCHHHHHC---CCSEEEEECCCHH--HHHHHHHHCTTSEEECCCT-TSCCSCSSCEEEEEEESCTTTCS--
T ss_pred CeEEEECCCCCHhHHhC---CCCeEEEEeCCHH--HHHHHHHhCCCcEEEEccc-ccCCCCCCcEEEEEEcChhhhcC--
Confidence 37999999999887777 2237889887642 2223333322334567787 56899899999999999999996
Q ss_pred hhhchhhhhhhhcc-CceEEEecCCCc-c-hhhhhhhhhcCCC----ccccchhHHHHHHH
Q 030792 82 YLNKTLPDLARVAS-DGVLIFAGYPGQ-Q-RAKVAELSKFGRP----AKMRSSSWWIRYFV 135 (171)
Q Consensus 82 ylNkTlPeLaRvs~-dgiVif~g~pgq-~-~ak~~elskfgr~----ak~RsssWW~r~F~ 135 (171)
...+.|-++.|+-+ +|.++++..+.. . ......+...|.+ ...-+..-|.+.|.
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG 170 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc
Confidence 45688999999866 456655543222 1 1111222233432 33446666777666
No 46
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.42 E-value=1e-06 Score=65.41 Aligned_cols=132 Identities=14% Similarity=0.093 Sum_probs=86.2
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccCh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 80 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLsp 80 (171)
.+||++|.|++.....|.+.- +.+..|||+++-- -..++.....--+.++|+ ..+| ...+||+|++++++.|+.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~--~~~a~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~~- 109 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDM--LEKAADRLPNTNFGKADL-ATWK-PAQKADLLYANAVFQWVP- 109 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHH--HHHHHHHSTTSEEEECCT-TTCC-CSSCEEEEEEESCGGGST-
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHH--HHHHHHhCCCcEEEECCh-hhcC-ccCCcCEEEEeCchhhCC-
Confidence 379999999999888887542 6788899876421 222333233344677888 4567 678999999999999994
Q ss_pred hhhhchhhhhhhhccCc-eEEEecCCCcch----hhhhhhhhc-------C----CCccccchhHHHHHHHHhccc
Q 030792 81 KYLNKTLPDLARVASDG-VLIFAGYPGQQR----AKVAELSKF-------G----RPAKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 81 rylNkTlPeLaRvs~dg-iVif~g~pgq~~----ak~~elskf-------g----r~ak~RsssWW~r~F~q~~le 140 (171)
...+.|.++.|+-+.| .++++- |+... ....++... . .+....+...|.+.+.++|++
T Consensus 110 -~~~~~l~~~~~~L~pgG~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 183 (259)
T 2p35_A 110 -DHLAVLSQLMDQLESGGVLAVQM-PDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKSSR 183 (259)
T ss_dssp -THHHHHHHHGGGEEEEEEEEEEE-ECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGEEE
T ss_pred -CHHHHHHHHHHhcCCCeEEEEEe-CCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcCCc
Confidence 3567889999886654 444443 33211 112222211 1 133456778899999988874
No 47
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.38 E-value=7.9e-07 Score=63.52 Aligned_cols=99 Identities=18% Similarity=0.217 Sum_probs=71.9
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH---hcceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH---KGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~---kG~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
.+||++|.|++.+...|.+....+..|+|+.+- +-..++.... .--+.++|+ ..+|+...+||+||...+++++
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~--~~~~a~~~~~~~~~i~~~~~d~-~~~~~~~~~fD~v~~~~~~~~~ 120 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFPNVTSVDYSSV--VVAAMQACYAHVPQLRWETMDV-RKLDFPSASFDVVLEKGTLDAL 120 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCCCEEEEESCHH--HHHHHHHHTTTCTTCEEEECCT-TSCCSCSSCEEEEEEESHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHH--HHHHHHHhcccCCCcEEEEcch-hcCCCCCCcccEEEECcchhhh
Confidence 379999999999988888765458888887642 2222333332 234567888 5678888999999999999998
Q ss_pred C-------------hhhhhchhhhhhhhccC-ceEEEec
Q 030792 79 S-------------PKYLNKTLPDLARVASD-GVLIFAG 103 (171)
Q Consensus 79 s-------------prylNkTlPeLaRvs~d-giVif~g 103 (171)
. .....+.|-++.|+-+. |.++++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 121 LAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp TTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 7 55677888898888664 5555554
No 48
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.36 E-value=1.8e-06 Score=62.27 Aligned_cols=95 Identities=17% Similarity=0.188 Sum_probs=68.4
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH----hcceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH----KGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~----kG~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
+||++|.|++.....|.+. +.+..|||+.+- +-..++.... .-.+..+|+ ..+|+...+||+|+++ +-|+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~--~~~~ 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-GYEVTAVDQSSV--GLAKAKQLAQEKGVKITTVQSNL-ADFDIVADAWEGIVSI--FCHL 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-TCEEEEECSSHH--HHHHHHHHHHHHTCCEEEECCBT-TTBSCCTTTCSEEEEE--CCCC
T ss_pred CEEEECCCCCHhHHHHHhC-CCeEEEEECCHH--HHHHHHHHHHhcCCceEEEEcCh-hhcCCCcCCccEEEEE--hhcC
Confidence 6999999999888777754 678999987642 2223333322 223556787 5678888999999985 4577
Q ss_pred Chhhhhchhhhhhhhcc-CceEEEec
Q 030792 79 SPKYLNKTLPDLARVAS-DGVLIFAG 103 (171)
Q Consensus 79 sprylNkTlPeLaRvs~-dgiVif~g 103 (171)
.+....+.|-++.|+-+ +|.++++.
T Consensus 106 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 106 PSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp CHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 88889999999999866 56666655
No 49
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.36 E-value=6e-07 Score=65.13 Aligned_cols=99 Identities=26% Similarity=0.270 Sum_probs=71.0
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 79 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLs 79 (171)
.+||++|.|++.+...|.+. ..+..|||+.+ ++.+..+++..-..--+..+|+ ..+|+...+||+||+++++.+..
T Consensus 40 ~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~~D~v~~~~~~~~~~ 117 (227)
T 1ve3_A 40 GKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDA-RKLSFEDKTFDYVIFIDSIVHFE 117 (227)
T ss_dssp CEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT-TSCCSCTTCEEEEEEESCGGGCC
T ss_pred CeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEECch-hcCCCCCCcEEEEEEcCchHhCC
Confidence 47999999999888776654 45889998764 2223333322212224567787 56788888999999999988888
Q ss_pred hhhhhchhhhhhhhccC-ceEEEe
Q 030792 80 PKYLNKTLPDLARVASD-GVLIFA 102 (171)
Q Consensus 80 prylNkTlPeLaRvs~d-giVif~ 102 (171)
.....+.|.++.|+-+. |.+++.
T Consensus 118 ~~~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 118 PLELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 88888899999987665 555554
No 50
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.35 E-value=6.3e-07 Score=62.99 Aligned_cols=122 Identities=12% Similarity=0.189 Sum_probs=79.6
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccChh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 81 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLspr 81 (171)
.+||++|.|++.....|.+... +..|||+.+- .-..|+....+=.+..+| +|+...+||+|+.++++.|+.
T Consensus 19 ~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~--~~~~a~~~~~~v~~~~~d----~~~~~~~~D~v~~~~~l~~~~-- 89 (170)
T 3i9f_A 19 GVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVI--ALKEVKEKFDSVITLSDP----KEIPDNSVDFILFANSFHDMD-- 89 (170)
T ss_dssp EEEEEETCTTCTTHHHHHTTEE-EEEEECSCHH--HHHHHHHHCTTSEEESSG----GGSCTTCEEEEEEESCSTTCS--
T ss_pred CeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHH--HHHHHHHhCCCcEEEeCC----CCCCCCceEEEEEccchhccc--
Confidence 3799999999999888886654 8999988642 233343332223334455 788889999999999999994
Q ss_pred hhhchhhhhhhhcc-CceEEEecCCCcchhhhhhhhhcCCCcc-ccchhHHHHHHHHhcccc
Q 030792 82 YLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAK-MRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 82 ylNkTlPeLaRvs~-dgiVif~g~pgq~~ak~~elskfgr~ak-~RsssWW~r~F~q~~lee 141 (171)
...+.+-++.|+-+ +|.++++.+.... ..++.+.. ..+...|.+.|. |++.
T Consensus 90 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~--Gf~~ 142 (170)
T 3i9f_A 90 DKQHVISEVKRILKDDGRVIIIDWRKEN-------TGIGPPLSIRMDEKDYMGWFS--NFVV 142 (170)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECSSC-------CSSSSCGGGCCCHHHHHHHTT--TEEE
T ss_pred CHHHHHHHHHHhcCCCCEEEEEEcCccc-------cccCchHhhhcCHHHHHHHHh--CcEE
Confidence 35678888888765 5666666532221 11232221 235556666665 6653
No 51
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.35 E-value=4e-07 Score=65.33 Aligned_cols=133 Identities=18% Similarity=0.206 Sum_probs=83.0
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCC---CCCCCc-ccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPL---PYRAKS-FPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpL---PYR~KS-FslVivSDaLdy 77 (171)
.+||++|.|++.....|.+. +.+..|||+.+- .-..|+.. ....+..+|+ ..+ |....+ ||+|+++.+|.
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~--~~~~a~~~-~~~~~~~~~~-~~~~~~~~~~~~~fD~v~~~~~l~- 127 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADR-GIEAVGVDGDRT--LVDAARAA-GAGEVHLASY-AQLAEAKVPVGKDYDLICANFALL- 127 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTT-TCEEEEEESCHH--HHHHHHHT-CSSCEEECCH-HHHHTTCSCCCCCEEEEEEESCCC-
T ss_pred CEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHH--HHHHHHHh-cccccchhhH-HhhcccccccCCCccEEEECchhh-
Confidence 37999999999998888865 678999988742 22233332 2233445555 233 555555 99999999998
Q ss_pred cChhhhhchhhhhhhhccC-ceEEEec-CCCcchhh-h------hhhhhc-----CCCccccchhHHHHHHHHhccccc
Q 030792 78 LSPKYLNKTLPDLARVASD-GVLIFAG-YPGQQRAK-V------AELSKF-----GRPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 78 LsprylNkTlPeLaRvs~d-giVif~g-~pgq~~ak-~------~elskf-----gr~ak~RsssWW~r~F~q~~leeN 142 (171)
.....+.|.++.|+-+. |.++++. .|...... . .....+ +.+...++..-|.+.+.++|++.-
T Consensus 128 --~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 204 (227)
T 3e8s_A 128 --HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLV 204 (227)
T ss_dssp --SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEE
T ss_pred --hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEE
Confidence 34556889999988765 5555543 22211100 0 001111 122235578899999999998754
No 52
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.34 E-value=5.1e-07 Score=68.62 Aligned_cols=95 Identities=21% Similarity=0.181 Sum_probs=72.1
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccChh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 81 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLspr 81 (171)
.+||++|.|++.....|.+. +.+..|||+++- .-..|+.... +.+.++|+ ..+|+...+||+|++++.+.++.+.
T Consensus 56 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~--~l~~a~~~~~-~~~~~~d~-~~~~~~~~~fD~v~~~~~~~~~~~~ 130 (260)
T 2avn_A 56 CRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKE--MLEVAREKGV-KNVVEAKA-EDLPFPSGAFEAVLALGDVLSYVEN 130 (260)
T ss_dssp CEEEEETCTTCHHHHHHHTT-TCEEEEEESCHH--HHHHHHHHTC-SCEEECCT-TSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHH--HHHHHHhhcC-CCEEECcH-HHCCCCCCCEEEEEEcchhhhcccc
Confidence 37999999999998888754 678999988642 2223333333 34788898 6788889999999999988888766
Q ss_pred hhhchhhhhhhhccC-ceEEEe
Q 030792 82 YLNKTLPDLARVASD-GVLIFA 102 (171)
Q Consensus 82 ylNkTlPeLaRvs~d-giVif~ 102 (171)
..+.|-++.|+-+. |+++++
T Consensus 131 -~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 131 -KDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp -HHHHHHHHHHHEEEEEEEEEE
T ss_pred -HHHHHHHHHHHcCCCeEEEEE
Confidence 78899999998764 555554
No 53
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.33 E-value=8.1e-07 Score=67.96 Aligned_cols=100 Identities=9% Similarity=0.047 Sum_probs=72.7
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 79 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLs 79 (171)
.+||++|-|++.....|.+. +.+..|||+.+- +-+..++...--.--+..+|+ ..+|. ..+||+||++.++.|++
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~-~~~fD~i~~~~~~~~~~ 198 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENLNISTALYDI-NAANI-QENYDFIVSTVVFMFLN 198 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCG-GGCCC-CSCEEEEEECSSGGGSC
T ss_pred CcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEecc-ccccc-cCCccEEEEccchhhCC
Confidence 37999999999988888755 668999988652 222233222111234566788 45555 89999999999999999
Q ss_pred hhhhhchhhhhhhhcc-CceEEEecC
Q 030792 80 PKYLNKTLPDLARVAS-DGVLIFAGY 104 (171)
Q Consensus 80 prylNkTlPeLaRvs~-dgiVif~g~ 104 (171)
+..+.+.+.++.|+-+ +|+++++..
T Consensus 199 ~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 199 RERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp GGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9999999999999865 566555543
No 54
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.33 E-value=1.9e-06 Score=65.11 Aligned_cols=96 Identities=24% Similarity=0.353 Sum_probs=70.1
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHh-Hhcc----eeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKGI----VRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv-~kG~----VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.|++.+...|.+.. +.+..|||+.+-- + ..++... ..|+ +.++|+ ..+|+...+||+|+++++|
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~-~-~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNNPDAEITSIDISPES-L-EKARENTEKNGIKNVKFLQANI-FSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHH-H-HHHHHHHHHTTCCSEEEEECCG-GGCCSCTTCEEEEEEESCG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHH-H-HHHHHHHHHcCCCCcEEEEccc-ccCCCCCCCeeEEEEechh
Confidence 379999999999998888664 6789999986532 2 2223222 2233 456788 5788889999999999999
Q ss_pred cccChhhhhchhhhhhhhcc-CceEEEe
Q 030792 76 DYLSPKYLNKTLPDLARVAS-DGVLIFA 102 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~-dgiVif~ 102 (171)
.|+.. ....|.++.|+-+ +|+++++
T Consensus 116 ~~~~~--~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 116 EHLQS--PEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp GGCSC--HHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCC--HHHHHHHHHHHcCCCcEEEEE
Confidence 99964 3478889998766 4555554
No 55
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.32 E-value=1.1e-06 Score=63.92 Aligned_cols=95 Identities=18% Similarity=0.277 Sum_probs=68.7
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHh-Hh---cceeeeeecCCCCCCCCcccEEEEcc-ccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV-HK---GIVRVADIKFPLPYRAKSFPLVIVSD-ALD 76 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv-~k---G~VRvadikfpLPYR~KSFslVivSD-aLd 76 (171)
.+||++|.|++.....|.+. +.+..|||+++-- -..|+... .. --+.++|+ ..+|.. .+||+||++. +|.
T Consensus 39 ~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~--~~~a~~~~~~~~~~~~~~~~d~-~~~~~~-~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 39 DDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEM--LSEAENKFRSQGLKPRLACQDI-SNLNIN-RKFDLITCCLDSTN 113 (246)
T ss_dssp TEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHH--HHHHHHHHHHTTCCCEEECCCG-GGCCCS-CCEEEEEECTTGGG
T ss_pred CeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHH--HHHHHHHHhhcCCCeEEEeccc-ccCCcc-CCceEEEEcCcccc
Confidence 47999999999998888855 6678899876422 12222222 22 24556777 456665 8999999996 999
Q ss_pred cc-Chhhhhchhhhhhhhcc-CceEEE
Q 030792 77 YL-SPKYLNKTLPDLARVAS-DGVLIF 101 (171)
Q Consensus 77 yL-sprylNkTlPeLaRvs~-dgiVif 101 (171)
|+ ++..+.+.|-++.|+-+ +|++++
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 114 YIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp GCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 99 66888999999999866 556655
No 56
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.32 E-value=2.8e-06 Score=66.36 Aligned_cols=136 Identities=11% Similarity=0.061 Sum_probs=88.7
Q ss_pred ccceeecCCchhHhHhh--hhcccccccccccccccchhHHHHHHhH-hc-----ceeeeeecCCCCCCCCcccEEEEcc
Q 030792 2 HKVLHVGPDTCSVVSTL--LKEEETEAWGVEPYDIEDADARCKSLVH-KG-----IVRVADIKFPLPYRAKSFPLVIVSD 73 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~l--lkee~teAWGVEPyd~~d~d~~CksLv~-kG-----~VRvadikfpLPYR~KSFslVivSD 73 (171)
.+||++|.|++.....| ....+.+..|||+++- .-..|+...+ .| -+..+|+ ..+|+. .+||+|+...
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~--~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGVQLVGIDYDPE--ALDGATRLAAGHALAGQITLHRQDA-WKLDTR-EGYDLLTSNG 195 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHH--HHHHHHHHHTTSTTGGGEEEEECCG-GGCCCC-SCEEEEECCS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHH--HHHHHHHHHHhcCCCCceEEEECch-hcCCcc-CCeEEEEECC
Confidence 36999999999988888 3455778999988643 2233444333 22 2566888 567776 9999999999
Q ss_pred ccccc-Chhhhhchhhhhhhhcc-CceEEEecCCCcch-hhhh------------h-----hhh-cCC-CccccchhHHH
Q 030792 74 ALDYL-SPKYLNKTLPDLARVAS-DGVLIFAGYPGQQR-AKVA------------E-----LSK-FGR-PAKMRSSSWWI 131 (171)
Q Consensus 74 aLdyL-sprylNkTlPeLaRvs~-dgiVif~g~pgq~~-ak~~------------e-----lsk-fgr-~ak~RsssWW~ 131 (171)
++.|+ .|...-+.+.++.|+-+ +|+++++....... .... . ... .+. -..+++...|.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTR 275 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHH
Confidence 99999 67777778999998765 55666554221100 0000 0 000 011 11357788899
Q ss_pred HHHHHhcccc
Q 030792 132 RYFVQTSLEE 141 (171)
Q Consensus 132 r~F~q~~lee 141 (171)
+.+.++|++.
T Consensus 276 ~~l~~aGF~~ 285 (305)
T 3ocj_A 276 AQLEEAGFTD 285 (305)
T ss_dssp HHHHHTTCEE
T ss_pred HHHHHCCCEE
Confidence 9999998864
No 57
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.31 E-value=8.4e-07 Score=65.00 Aligned_cols=96 Identities=22% Similarity=0.297 Sum_probs=67.5
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEc-cccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALDYL 78 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivS-DaLdyL 78 (171)
.+||++|.|++.....|.+. .+..|||+++- +-+..+++..-..--+..+|+ ..+|.. .+||+|+++ |++.|+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~-~~fD~v~~~~~~~~~~ 110 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDM-RELELP-EPVDAITILCDSLNYL 110 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCG-GGCCCS-SCEEEEEECTTGGGGC
T ss_pred CeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcCh-hhcCCC-CCcCEEEEeCCchhhc
Confidence 37999999999888887765 78999988652 222222222111223456777 445654 789999987 699999
Q ss_pred -Chhhhhchhhhhhhhcc-CceEEE
Q 030792 79 -SPKYLNKTLPDLARVAS-DGVLIF 101 (171)
Q Consensus 79 -sprylNkTlPeLaRvs~-dgiVif 101 (171)
++..+.+.|-++.|+-+ +|++++
T Consensus 111 ~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 111 QTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp CSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 77888899999999755 566665
No 58
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.29 E-value=2.6e-06 Score=66.33 Aligned_cols=136 Identities=15% Similarity=0.209 Sum_probs=87.8
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHh-Hhc---ce--eeeeecCCCCCCCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKG---IV--RVADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv-~kG---~V--RvadikfpLPYR~KSFslVivSDa 74 (171)
.+||+||.|++.....|++.- +.+..|+++.++ -..++..+ +.| .| ..+|+ +.+|... .||+|+.+++
T Consensus 167 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~---~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~-~~D~v~~~~~ 241 (335)
T 2r3s_A 167 LKVLDISASHGLFGIAVAQHNPNAEIFGVDWASV---LEVAKENARIQGVASRYHTIAGSA-FEVDYGN-DYDLVLLPNF 241 (335)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHH---HHHHHHHHHHHTCGGGEEEEESCT-TTSCCCS-CEEEEEEESC
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHH---HHHHHHHHHhcCCCcceEEEeccc-ccCCCCC-CCcEEEEcch
Confidence 479999999999988888653 567888887632 22333322 222 23 45666 3335433 4999999999
Q ss_pred ccccChhhhhchhhhhhhhcc-CceEEEec-CCCcch-----hhhhhhhh--cCCCccccchhHHHHHHHHhccccc
Q 030792 75 LDYLSPKYLNKTLPDLARVAS-DGVLIFAG-YPGQQR-----AKVAELSK--FGRPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRvs~-dgiVif~g-~pgq~~-----ak~~elsk--fgr~ak~RsssWW~r~F~q~~leeN 142 (171)
|.|+++....+.|-++.|+-+ +|.++++. .+.+.. ....++.- .....+.++..-|.+.+.++|++.-
T Consensus 242 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~ 318 (335)
T 2r3s_A 242 LHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHS 318 (335)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEE
T ss_pred hccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCee
Confidence 999999988999999998755 56455443 222211 11111111 1113467888899999999998653
No 59
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.29 E-value=1.2e-06 Score=66.05 Aligned_cols=96 Identities=18% Similarity=0.156 Sum_probs=72.9
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcc-ccccc-C
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSD-ALDYL-S 79 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSD-aLdyL-s 79 (171)
.+||++|-|++.....|.+. +.+..||++++- .-..|+....+-.+.++|+ ..+|. ..+||+|+++. +|.|+ +
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~--~~~~a~~~~~~~~~~~~d~-~~~~~-~~~fD~v~~~~~~l~~~~~ 126 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADS-FGTVEGLELSAD--MLAIARRRNPDAVLHHGDM-RDFSL-GRRFSAVTCMFSSIGHLAG 126 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTT-SSEEEEEESCHH--HHHHHHHHCTTSEEEECCT-TTCCC-SCCEEEEEECTTGGGGSCH
T ss_pred CcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHH--HHHHHHhhCCCCEEEECCh-HHCCc-cCCcCEEEEcCchhhhcCC
Confidence 47999999999998888855 567889887642 2334444444445677888 56777 88999999997 99999 5
Q ss_pred hhhhhchhhhhhhhcc-CceEEEe
Q 030792 80 PKYLNKTLPDLARVAS-DGVLIFA 102 (171)
Q Consensus 80 prylNkTlPeLaRvs~-dgiVif~ 102 (171)
|..+.+.|.++.|+-+ +|++++.
T Consensus 127 ~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 127 QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 6788899999999865 5666664
No 60
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.27 E-value=1.3e-06 Score=60.71 Aligned_cols=92 Identities=11% Similarity=0.087 Sum_probs=65.7
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHh-HhcceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv-~kG~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
.+||++|.|++.+...|.+ ...+..|||+.+- +-+..+++..- ..--+..+|+.- |+...+||+|++++.
T Consensus 37 ~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~--~~~~~~~D~i~~~~~---- 109 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED--VLDKLEFNKAFIGGT---- 109 (183)
T ss_dssp CEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH--HGGGCCCSEEEECSC----
T ss_pred CEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc--cccCCCCcEEEECCc----
Confidence 3699999999999888886 7788999997642 22333332211 111245577744 555689999999988
Q ss_pred ChhhhhchhhhhhhhccCceEEEec
Q 030792 79 SPKYLNKTLPDLARVASDGVLIFAG 103 (171)
Q Consensus 79 sprylNkTlPeLaRvs~dgiVif~g 103 (171)
..+...+.++.|+ .+|.++++.
T Consensus 110 --~~~~~~l~~~~~~-~gG~l~~~~ 131 (183)
T 2yxd_A 110 --KNIEKIIEILDKK-KINHIVANT 131 (183)
T ss_dssp --SCHHHHHHHHHHT-TCCEEEEEE
T ss_pred --ccHHHHHHHHhhC-CCCEEEEEe
Confidence 4567788899999 999988877
No 61
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.26 E-value=9.7e-07 Score=68.39 Aligned_cols=96 Identities=7% Similarity=0.110 Sum_probs=72.6
Q ss_pred ccceeecCCchhHhHhhhh--cccccccccccccc--cchhHHHHHH---hHhcceeeeeecCCCCCCC------CcccE
Q 030792 2 HKVLHVGPDTCSVVSTLLK--EEETEAWGVEPYDI--EDADARCKSL---VHKGIVRVADIKFPLPYRA------KSFPL 68 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llk--ee~teAWGVEPyd~--~d~d~~CksL---v~kG~VRvadikfpLPYR~------KSFsl 68 (171)
.+||++|.|++.....|.+ ....+..||++++. +-+..+++.. ..+--+.++|+ ..+|+.. .+||+
T Consensus 38 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~~~~fD~ 116 (299)
T 3g5t_A 38 KLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSS-DDFKFLGADSVDKQKIDM 116 (299)
T ss_dssp SEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCT-TCCGGGCTTTTTSSCEEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCH-HhCCccccccccCCCeeE
Confidence 3799999999999999987 56889999998753 3344444433 22334567888 5677777 89999
Q ss_pred EEEcccccccChhhhhchhhhhhhhcc-CceEEE
Q 030792 69 VIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIF 101 (171)
Q Consensus 69 VivSDaLdyLsprylNkTlPeLaRvs~-dgiVif 101 (171)
|+++.++.|+ ...+.|.++.|+-+ .|.+++
T Consensus 117 V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 117 ITAVECAHWF---DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEESCGGGS---CHHHHHHHHHHHEEEEEEEEE
T ss_pred EeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEE
Confidence 9999999999 66788999999765 456655
No 62
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.23 E-value=2.7e-06 Score=62.11 Aligned_cols=105 Identities=16% Similarity=0.232 Sum_probs=78.0
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccChh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 81 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLspr 81 (171)
.+||++|.|++.+...| ..+..||++.+- .--+.++|+ ..+|+...+||+|+++++|.+ .
T Consensus 69 ~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~------------~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~---~ 128 (215)
T 2zfu_A 69 LVVADFGCGDCRLASSI----RNPVHCFDLASL------------DPRVTVCDM-AQVPLEDESVDVAVFCLSLMG---T 128 (215)
T ss_dssp SCEEEETCTTCHHHHHC----CSCEEEEESSCS------------STTEEESCT-TSCSCCTTCEEEEEEESCCCS---S
T ss_pred CeEEEECCcCCHHHHHh----hccEEEEeCCCC------------CceEEEecc-ccCCCCCCCEeEEEEehhccc---c
Confidence 36999999999887766 267888888765 234667888 558888899999999999953 4
Q ss_pred hhhchhhhhhhhcc-CceEEEecCCCcchhhhhhhhhcCCCccccchhHHHHHHHHhccccc
Q 030792 82 YLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 82 ylNkTlPeLaRvs~-dgiVif~g~pgq~~ak~~elskfgr~ak~RsssWW~r~F~q~~leeN 142 (171)
...+.|-++.|+-+ +|.++++..... ..+...|.+.+.++|++.-
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~~~~----------------~~~~~~~~~~l~~~Gf~~~ 174 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEVSSR----------------FEDVRTFLRAVTKLGFKIV 174 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECGGG----------------CSCHHHHHHHHHHTTEEEE
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEcCCC----------------CCCHHHHHHHHHHCCCEEE
Confidence 55778888888755 566666643321 1277888999999998643
No 63
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.21 E-value=3.8e-06 Score=66.60 Aligned_cols=97 Identities=14% Similarity=0.234 Sum_probs=70.8
Q ss_pred cceeecCCchhHhHhhhhc---cccccccccccc--ccchhHHHHHHhHhcc--eeeeeecCCCCCCCCcccEEEEcccc
Q 030792 3 KVLHVGPDTCSVVSTLLKE---EETEAWGVEPYD--IEDADARCKSLVHKGI--VRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke---e~teAWGVEPyd--~~d~d~~CksLv~kG~--VRvadikfpLPYR~KSFslVivSDaL 75 (171)
+||++|-||+.....|.+. .+.+.-||++++ ++-+..+++..-.... +..+|+ ..+|+ .+||+|++..+|
T Consensus 73 ~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~-~~~~~--~~~d~v~~~~~l 149 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDI-RDIAI--ENASMVVLNFTL 149 (261)
T ss_dssp EEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCT-TTCCC--CSEEEEEEESCG
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccc-ccccc--cccccceeeeee
Confidence 6999999999988888754 345788998875 3334444433222223 345888 67887 469999999999
Q ss_pred cccChhhhhchhhhhhhhcc-CceEEEe
Q 030792 76 DYLSPKYLNKTLPDLARVAS-DGVLIFA 102 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~-dgiVif~ 102 (171)
.|+.|....+.|.++.|+=+ .|++|++
T Consensus 150 ~~~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 150 QFLEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eecCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 99999988889999999755 5555554
No 64
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.20 E-value=3e-06 Score=61.92 Aligned_cols=96 Identities=17% Similarity=0.267 Sum_probs=70.4
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEE-Eccccccc-C
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVI-VSDALDYL-S 79 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVi-vSDaLdyL-s 79 (171)
.+||++|.|++.....|.+. ..+..|||+++- .-..++.....--+..+|+ ..+|. ..+||+|+ ..+++.|+ +
T Consensus 42 ~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~--~~~~a~~~~~~~~~~~~d~-~~~~~-~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 42 SSLLDVACGTGTHLEHFTKE-FGDTAGLELSED--MLTHARKRLPDATLHQGDM-RDFRL-GRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp CEEEEETCTTSHHHHHHHHH-HSEEEEEESCHH--HHHHHHHHCTTCEEEECCT-TTCCC-SSCEEEEEECTTGGGGCCS
T ss_pred CeEEEecccCCHHHHHHHHh-CCcEEEEeCCHH--HHHHHHHhCCCCEEEECCH-HHccc-CCCCcEEEEcCchHhhcCC
Confidence 36999999999998888865 447888887642 2223333333345667888 55677 78999999 56799999 5
Q ss_pred hhhhhchhhhhhhhcc-CceEEEe
Q 030792 80 PKYLNKTLPDLARVAS-DGVLIFA 102 (171)
Q Consensus 80 prylNkTlPeLaRvs~-dgiVif~ 102 (171)
|..+.+.|-++.|+-+ +|.++++
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 6888999999998865 5666665
No 65
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.20 E-value=8.4e-07 Score=70.57 Aligned_cols=93 Identities=19% Similarity=0.218 Sum_probs=67.8
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhc-ceeeeeecCCCCCCCCcccEEEEcccccccChh
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 81 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG-~VRvadikfpLPYR~KSFslVivSDaLdyLspr 81 (171)
+||+||-||+.....|. +...+..||+|++-- . ..|+. +.+ -+.++|. -.+|+...|||+|+++.++.|+.+
T Consensus 42 ~vLDvGcGtG~~~~~l~-~~~~~v~gvD~s~~m-l-~~a~~--~~~v~~~~~~~-e~~~~~~~sfD~v~~~~~~h~~~~- 114 (257)
T 4hg2_A 42 DALDCGCGSGQASLGLA-EFFERVHAVDPGEAQ-I-RQALR--HPRVTYAVAPA-EDTGLPPASVDVAIAAQAMHWFDL- 114 (257)
T ss_dssp EEEEESCTTTTTHHHHH-TTCSEEEEEESCHHH-H-HTCCC--CTTEEEEECCT-TCCCCCSSCEEEEEECSCCTTCCH-
T ss_pred CEEEEcCCCCHHHHHHH-HhCCEEEEEeCcHHh-h-hhhhh--cCCceeehhhh-hhhcccCCcccEEEEeeehhHhhH-
Confidence 69999999987766665 667899999998621 0 11111 112 2456776 578999999999999999999875
Q ss_pred hhhchhhhhhhhcc-CceEEEecC
Q 030792 82 YLNKTLPDLARVAS-DGVLIFAGY 104 (171)
Q Consensus 82 ylNkTlPeLaRvs~-dgiVif~g~ 104 (171)
.+.+.|+.||-+ .|++++.++
T Consensus 115 --~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 115 --DRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp --HHHHHHHHHHEEEEEEEEEEEE
T ss_pred --HHHHHHHHHHcCCCCEEEEEEC
Confidence 478999999854 566666654
No 66
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.20 E-value=2.4e-06 Score=63.76 Aligned_cols=124 Identities=19% Similarity=0.123 Sum_probs=86.4
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-----------------hcceeeeeecCCCCCCC-C
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-----------------KGIVRVADIKFPLPYRA-K 64 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-----------------kG~VRvadikfpLPYR~-K 64 (171)
+||++|-||......|.+. +.+..||+.++-- =..++.-.+ .--+.++|+ +.+|+.. .
T Consensus 25 ~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~--l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~-~~l~~~~~~ 100 (203)
T 1pjz_A 25 RVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAA--VERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF-FALTARDIG 100 (203)
T ss_dssp EEEETTTCCSHHHHHHHHH-CCEEEEEEECHHH--HHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC-SSSTHHHHH
T ss_pred EEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHH--HHHHHHHccCCcccccccccccccCCccEEEECcc-ccCCcccCC
Confidence 6999999999998888754 6789999987632 222333221 113567898 7899875 8
Q ss_pred cccEEEEcccccccChhhhhchhhhhhhhccCc-e--EEEecCCCcchhhhhhhhhcCCCccccchhHHHHHHHHhccc
Q 030792 65 SFPLVIVSDALDYLSPKYLNKTLPDLARVASDG-V--LIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 65 SFslVivSDaLdyLsprylNkTlPeLaRvs~dg-i--Vif~g~pgq~~ak~~elskfgr~ak~RsssWW~r~F~q~~le 140 (171)
+||+|+...++.|+.+....+.+.++.|+-+.| . ++...++ +. ...|.| -..+...+.+.|.+ |++
T Consensus 101 ~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~-~~-------~~~~~~-~~~~~~el~~~~~~-gf~ 169 (203)
T 1pjz_A 101 HCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYD-QA-------LLEGPP-FSVPQTWLHRVMSG-NWE 169 (203)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSC-SS-------SSSSCC-CCCCHHHHHHTSCS-SEE
T ss_pred CEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecC-cc-------ccCCCC-CCCCHHHHHHHhcC-CcE
Confidence 999999999999999888888999999987665 3 3333344 21 112333 23466778888876 653
No 67
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.18 E-value=1.7e-06 Score=65.93 Aligned_cols=103 Identities=20% Similarity=0.163 Sum_probs=73.3
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccccc--chhHHHHH-----HhHhcceeeeeecCCCC---CCCCcccEEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIE--DADARCKS-----LVHKGIVRVADIKFPLP---YRAKSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~--d~d~~Cks-----Lv~kG~VRvadikfpLP---YR~KSFslViv 71 (171)
.+||++|.||+.....|.+. +.+..||++++.- -+..++.. -...-.+..+|+ ..+| +...+||+|++
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~fD~V~~ 136 (293)
T 3thr_A 59 HRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANW-LTLDKDVPAGDGFDAVIC 136 (293)
T ss_dssp CEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG-GGHHHHSCCTTCEEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecCh-hhCccccccCCCeEEEEE
Confidence 37999999999998888855 5689999887532 12222211 112223566777 6677 88899999999
Q ss_pred c-ccccccCh-----hhhhchhhhhhhhccCceEEEecCCC
Q 030792 72 S-DALDYLSP-----KYLNKTLPDLARVASDGVLIFAGYPG 106 (171)
Q Consensus 72 S-DaLdyLsp-----rylNkTlPeLaRvs~dgiVif~g~pg 106 (171)
+ +++.|+.. +.+.+.|-++.|+-+.|=++++..|.
T Consensus 137 ~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 137 LGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp CTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9 99999998 77899999999987655444444443
No 68
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.18 E-value=3.5e-06 Score=58.96 Aligned_cols=97 Identities=12% Similarity=0.082 Sum_probs=65.0
Q ss_pred ccceeecCCchhHhHhhhhcc-ccccccccccc--ccchhHHHHHHhHh-cceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHK-GIVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd--~~d~d~~CksLv~k-G~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|.|++.+...|.+.- +.+..|||+.+ ++-+..+++.+--. .++..+|..-++|....+||+|+.+..+.+
T Consensus 27 ~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~~~ 106 (178)
T 3hm2_A 27 ETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTA 106 (178)
T ss_dssp EEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-TTC
T ss_pred CeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcccH
Confidence 379999999998888877653 67899999876 33333333332111 234446665566665589999999999887
Q ss_pred cChhhhhchhhhhhhh-ccCceEEEecC
Q 030792 78 LSPKYLNKTLPDLARV-ASDGVLIFAGY 104 (171)
Q Consensus 78 LsprylNkTlPeLaRv-s~dgiVif~g~ 104 (171)
.+.+.++.|+ ..+|.+++...
T Consensus 107 ------~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 107 ------PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp ------TTHHHHHHHTCCTTCEEEEEEC
T ss_pred ------HHHHHHHHHhcCCCCEEEEEee
Confidence 4566677774 55677777664
No 69
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.16 E-value=1.1e-05 Score=63.30 Aligned_cols=137 Identities=12% Similarity=0.130 Sum_probs=87.4
Q ss_pred cceeecCCchhHhHhhhhcc-cccccccccccc-cchhHHHHHHhHhcce--eeeeecCCCCCCCCcccEEEEccccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI-EDADARCKSLVHKGIV--RVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~-~d~d~~CksLv~kG~V--RvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
+||+||.|++.....|++.- +.+..|+++-++ +.+..++...--.+.| ..+|+--++| .+||+|+.+++|.+.
T Consensus 170 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~D~v~~~~vl~~~ 246 (334)
T 2ip2_A 170 SFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVP---SNGDIYLLSRIIGDL 246 (334)
T ss_dssp EEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCC---SSCSEEEEESCGGGC
T ss_pred EEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCC---CCCCEEEEchhccCC
Confidence 79999999999998888653 457778876222 2233333221111223 4567644555 689999999999999
Q ss_pred Chhhhhchhhhhhhhcc-CceEEEec--CCCc--c-hhhhhhhhhcC-CCccccchhHHHHHHHHhccccc
Q 030792 79 SPKYLNKTLPDLARVAS-DGVLIFAG--YPGQ--Q-RAKVAELSKFG-RPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 79 sprylNkTlPeLaRvs~-dgiVif~g--~pgq--~-~ak~~elskfg-r~ak~RsssWW~r~F~q~~leeN 142 (171)
++....+.|-++.|+-+ +|.+++.- .|.. . .....++.-.. ...+.|+..-|.+.+.++|++.-
T Consensus 247 ~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 317 (334)
T 2ip2_A 247 DEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVE 317 (334)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCcee
Confidence 99988899999988754 56666553 2321 1 11111221110 01356788899999999998743
No 70
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.16 E-value=4.4e-06 Score=68.48 Aligned_cols=136 Identities=20% Similarity=0.181 Sum_probs=87.5
Q ss_pred cceeecCCchhHhHhhhhc--cccccccccccc--ccchhHHHHHHhHh--c-------ceeeeeecCCC------CCCC
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHK--G-------IVRVADIKFPL------PYRA 63 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd--~~d~d~~CksLv~k--G-------~VRvadikfpL------PYR~ 63 (171)
+||++|.||+.....|.+. .+.+..||++++ ++-+..+++.+-.+ | -+.++|+ ..+ |+..
T Consensus 86 ~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~-~~l~~~~~~~~~~ 164 (383)
T 4fsd_A 86 TVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFI-ENLATAEPEGVPD 164 (383)
T ss_dssp EEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCT-TCGGGCBSCCCCT
T ss_pred EEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccH-HHhhhcccCCCCC
Confidence 6999999999988888876 466899999865 23344444433221 3 2456777 444 8889
Q ss_pred CcccEEEEcccccccChhhhhchhhhhhhhcc-CceEEEec-CCCcc-hhhhhh-hhhcCC-CccccchhHHHHHHHHhc
Q 030792 64 KSFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG-YPGQQ-RAKVAE-LSKFGR-PAKMRSSSWWIRYFVQTS 138 (171)
Q Consensus 64 KSFslVivSDaLdyLsprylNkTlPeLaRvs~-dgiVif~g-~pgq~-~ak~~e-lskfgr-~ak~RsssWW~r~F~q~~ 138 (171)
.+||+|++..+|.|+.. ..+.|.++.|+-+ +|.++++. .+.+. ...... ..-+|. .....+..-|.+.+.++|
T Consensus 165 ~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 242 (383)
T 4fsd_A 165 SSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAG 242 (383)
T ss_dssp TCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTT
T ss_pred CCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCC
Confidence 99999999999999854 5688999999866 45666543 22211 001111 001111 122345577888999998
Q ss_pred ccc
Q 030792 139 LEE 141 (171)
Q Consensus 139 lee 141 (171)
++.
T Consensus 243 F~~ 245 (383)
T 4fsd_A 243 FRD 245 (383)
T ss_dssp CCC
T ss_pred Cce
Confidence 863
No 71
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.15 E-value=4.6e-06 Score=65.62 Aligned_cols=135 Identities=12% Similarity=0.112 Sum_probs=71.7
Q ss_pred ccceeecCCchhHhHhhhhccccccccccc-cc--ccchhHHH-----HHHhH----hcceeeeeecC-----CCC-C-C
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEP-YD--IEDADARC-----KSLVH----KGIVRVADIKF-----PLP-Y-R 62 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEP-yd--~~d~d~~C-----ksLv~----kG~VRvadikf-----pLP-Y-R 62 (171)
.+||++|-||+.+--.|.+....+..||+. .. ++.+..|+ +..-- .+.|++..... .++ + .
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTG 160 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHS
T ss_pred CeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhcc
Confidence 369999999988766666654458999988 32 33344454 21100 02344321111 111 0 3
Q ss_pred CCcccEEEEcccccccChhhhhchhhhhhhhcc------CceEEEecCCCc------chhhhhhhhhcC--CCccccchh
Q 030792 63 AKSFPLVIVSDALDYLSPKYLNKTLPDLARVAS------DGVLIFAGYPGQ------QRAKVAELSKFG--RPAKMRSSS 128 (171)
Q Consensus 63 ~KSFslVivSDaLdyLsprylNkTlPeLaRvs~------dgiVif~g~pgq------~~ak~~elskfg--r~ak~Rsss 128 (171)
..+||+||++|++-+ +..+.+.+.++.|+-+ +|+++++-.|.. ...-...+.+.| +..++....
T Consensus 161 ~~~fD~Ii~~dvl~~--~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~~~~~ 238 (281)
T 3bzb_A 161 LQRFQVVLLADLLSF--HQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEPWLSPL 238 (281)
T ss_dssp CSSBSEEEEESCCSC--GGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEEEECCC
T ss_pred CCCCCEEEEeCcccC--hHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEEecccc
Confidence 578999999999977 5567788888888766 786554433322 222233455666 444553444
Q ss_pred HHHHHHHHhc
Q 030792 129 WWIRYFVQTS 138 (171)
Q Consensus 129 WW~r~F~q~~ 138 (171)
-|...|.++.
T Consensus 239 ~~~~~f~~~~ 248 (281)
T 3bzb_A 239 QMDPMFPDDP 248 (281)
T ss_dssp ----------
T ss_pred ccccccccCC
Confidence 4567776653
No 72
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.15 E-value=6.4e-06 Score=63.74 Aligned_cols=99 Identities=12% Similarity=0.101 Sum_probs=69.0
Q ss_pred ccceeecCCchhHhHhhhhcc--cccccccccccccchhHHHHHHhH----hcceeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYDIEDADARCKSLVH----KGIVRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee--~teAWGVEPyd~~d~d~~CksLv~----kG~VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.||+.....|.+.- +.+..||++++.- -..++.... +=-+.++|+ ..+|+ +.+||+|++..+|
T Consensus 24 ~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~--~~~a~~~~~~~~~~v~~~~~d~-~~~~~-~~~fD~v~~~~~l 99 (284)
T 3gu3_A 24 VHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETL--LAEARELFRLLPYDSEFLEGDA-TEIEL-NDKYDIAICHAFL 99 (284)
T ss_dssp CEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHH--HHHHHHHHHSSSSEEEEEESCT-TTCCC-SSCEEEEEEESCG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHH--HHHHHHHHHhcCCceEEEEcch-hhcCc-CCCeeEEEECChh
Confidence 379999999999988888652 4788999886532 222333322 223567888 46888 5799999999999
Q ss_pred cccChhhhhchhhhhhhhccCceEEEecCCC
Q 030792 76 DYLSPKYLNKTLPDLARVASDGVLIFAGYPG 106 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~dgiVif~g~pg 106 (171)
.|+... .+.|.++.|+-+.|=.+++.-|.
T Consensus 100 ~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 100 LHMTTP--ETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGCSSH--HHHHHHHHHTEEEEEEEEEEECC
T ss_pred hcCCCH--HHHHHHHHHHcCCCCEEEEEecc
Confidence 999643 57888888876654444433333
No 73
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.14 E-value=4.5e-06 Score=66.39 Aligned_cols=132 Identities=20% Similarity=0.187 Sum_probs=85.1
Q ss_pred ccceeecCCchhHhHhhhhcc-ccccccccc-ccccchhHHHHHHhHhc---ce--eeeeecCCCCCCCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEP-YDIEDADARCKSLVHKG---IV--RVADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEP-yd~~d~d~~CksLv~kG---~V--RvadikfpLPYR~KSFslVivSDa 74 (171)
.+||+||.|++.+...|++.- +.+..|++. .-++.+..+++ +.| .| ..+|+--++|. .||+|+.+++
T Consensus 184 ~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~---~~~~~~~v~~~~~d~~~~~~~---~~D~v~~~~v 257 (374)
T 1qzz_A 184 RHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFA---DAGLADRVTVAEGDFFKPLPV---TADVVLLSFV 257 (374)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHH---HTTCTTTEEEEECCTTSCCSC---CEEEEEEESC
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHH---hcCCCCceEEEeCCCCCcCCC---CCCEEEEecc
Confidence 479999999999999888654 457777774 22222333322 223 23 45676446664 4999999999
Q ss_pred ccccChhhhhchhhhhhhhcc-CceEEEecC----CCcch---hhhhhh---hhcCCCccccchhHHHHHHHHhcccc
Q 030792 75 LDYLSPKYLNKTLPDLARVAS-DGVLIFAGY----PGQQR---AKVAEL---SKFGRPAKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRvs~-dgiVif~g~----pgq~~---ak~~el---skfgr~ak~RsssWW~r~F~q~~lee 141 (171)
|.|+++....+.|-++.|+-+ +|.++++-. |.... ....++ ..+| .+.++..-|.+.|.++|++.
T Consensus 258 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~aGf~~ 333 (374)
T 1qzz_A 258 LLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMG--GRVRTRDEVVDLAGSAGLAL 333 (374)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHS--CCCCCHHHHHHHHHTTTEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCC--CcCCCHHHHHHHHHHCCCce
Confidence 999998887888999998754 565555433 43211 111111 1122 35688889999999999864
No 74
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.14 E-value=4.2e-06 Score=80.96 Aligned_cols=104 Identities=11% Similarity=0.104 Sum_probs=81.0
Q ss_pred ccceeecCCchhHhHhhhhccc--ccccccccccc--cchhHHHHHHhH---hc----ceeeeeecCCCCCCCCcccEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE--TEAWGVEPYDI--EDADARCKSLVH---KG----IVRVADIKFPLPYRAKSFPLVI 70 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~--teAWGVEPyd~--~d~d~~CksLv~---kG----~VRvadikfpLPYR~KSFslVi 70 (171)
.+||++|-|++.....|.+... .+..||++++- +-+..+.+.... .| .+.++|+ ..+|++..+||+|+
T Consensus 723 ~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa-~dLp~~d~sFDlVV 801 (950)
T 3htx_A 723 STLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI-LEFDSRLHDVDIGT 801 (950)
T ss_dssp SEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT-TSCCTTSCSCCEEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch-HhCCcccCCeeEEE
Confidence 3799999999999999886653 78999998763 223233332211 13 3667888 67999999999999
Q ss_pred EcccccccChhhhhchhhhhhhhccCceEEEecCCCc
Q 030792 71 VSDALDYLSPKYLNKTLPDLARVASDGVLIFAGYPGQ 107 (171)
Q Consensus 71 vSDaLdyLsprylNkTlPeLaRvs~dgiVif~g~pgq 107 (171)
+.++|+|+.+..+-+.+.++.|+-+.| ++++..|..
T Consensus 802 ~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 802 CLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred EeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 999999999999999999999999999 666666654
No 75
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.13 E-value=8.9e-06 Score=64.55 Aligned_cols=135 Identities=18% Similarity=0.157 Sum_probs=88.0
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccc-cccccchhHHHHHHhH--hcceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVE-PYDIEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVE-Pyd~~d~d~~CksLv~--kG~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||+||.|++.+...|++.. +.+..|++ |.-++.+..+++..-- +=-+..+|+.-++|- .||+|+.+++|.+
T Consensus 185 ~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~D~v~~~~vl~~ 261 (360)
T 1tw3_A 185 RHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPR---KADAIILSFVLLN 261 (360)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSS---CEEEEEEESCGGG
T ss_pred cEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCC---CccEEEEcccccC
Confidence 379999999999998888654 45677777 4334434444332211 112445777445663 4999999999999
Q ss_pred cChhhhhchhhhhhhhcc-CceEEEecC---CCcc---hhhhhhh---hhcCCCccccchhHHHHHHHHhcccc
Q 030792 78 LSPKYLNKTLPDLARVAS-DGVLIFAGY---PGQQ---RAKVAEL---SKFGRPAKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 78 LsprylNkTlPeLaRvs~-dgiVif~g~---pgq~---~ak~~el---skfgr~ak~RsssWW~r~F~q~~lee 141 (171)
+++....+.|.++.|+-+ +|.++++-. |... -....++ ..+| .+.|+..-|.+.|.++|++.
T Consensus 262 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t~~e~~~ll~~aGf~~ 333 (360)
T 1tw3_A 262 WPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLG--GALRTREKWDGLAASAGLVV 333 (360)
T ss_dssp SCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHS--CCCCBHHHHHHHHHHTTEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcC--CcCCCHHHHHHHHHHCCCeE
Confidence 998888889999998754 565555432 3221 1111122 1223 35688889999999998864
No 76
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.13 E-value=4.4e-06 Score=65.31 Aligned_cols=100 Identities=17% Similarity=0.138 Sum_probs=71.8
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHh------------cceeeeeecCCCC----CC--CC
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK------------GIVRVADIKFPLP----YR--AK 64 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~k------------G~VRvadikfpLP----YR--~K 64 (171)
+||++|.|++.....|++....+..||++.+- .-..|+..... --+.++|+ ..+| +. ..
T Consensus 37 ~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~--~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 37 TVLDLGCGKGGDLLKWKKGRINKLVCTDIADV--SVKQCQQRYEDMKNRRDSEYIFSAEFITADS-SKELLIDKFRDPQM 113 (313)
T ss_dssp EEEEETCTTTTTHHHHHHTTCSEEEEEESCHH--HHHHHHHHHHHHHSSSCC-CCCEEEEEECCT-TTSCSTTTCSSTTC
T ss_pred EEEEECCCCcHHHHHHHhcCCCEEEEEeCCHH--HHHHHHHHHHHhhhcccccccceEEEEEecc-cccchhhhcccCCC
Confidence 69999999999999998766778889987652 12233333221 23567888 3443 54 44
Q ss_pred cccEEEEccccccc--Chhhhhchhhhhhhhcc-CceEEEecCCC
Q 030792 65 SFPLVIVSDALDYL--SPKYLNKTLPDLARVAS-DGVLIFAGYPG 106 (171)
Q Consensus 65 SFslVivSDaLdyL--sprylNkTlPeLaRvs~-dgiVif~g~pg 106 (171)
+||+|+++.+|.|+ ++..+.+.|-++.|+-+ +|++|++ .|+
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~-~~~ 157 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT-TPN 157 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE-EEC
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe-cCC
Confidence 99999999999998 77888899999999765 5565554 444
No 77
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.11 E-value=7.9e-06 Score=66.37 Aligned_cols=147 Identities=12% Similarity=0.087 Sum_probs=90.9
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcce--eeeeecCCCC-CCCCcccEEEEccccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIV--RVADIKFPLP-YRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~V--RvadikfpLP-YR~KSFslVivSDaLdyL 78 (171)
.+||++|.||+.+...|.+ .+.+..|||+++- .-..++...+...+ ++.|+..+++ --..+||+|+++.+|.|+
T Consensus 47 ~~VLDlGcGtG~~a~~La~-~g~~V~gvD~S~~--ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~ 123 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALE-RGASVTVFDFSQR--MCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLINRF 123 (261)
T ss_dssp CEEEEECTTCHHHHHHHHH-TTCEEEEEESCHH--HHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGGGS
T ss_pred CEEEEEeCcchHHHHHHHh-cCCEEEEEECCHH--HHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhHhC
Confidence 3799999999998777774 5678999988752 11223333332222 2333333222 125789999999999999
Q ss_pred ChhhhhchhhhhhhhccCceEEEecCCCcc-hh--hhhhhhhcCCC----------cc-ccchhHHHHHHHHhccccchH
Q 030792 79 SPKYLNKTLPDLARVASDGVLIFAGYPGQQ-RA--KVAELSKFGRP----------AK-MRSSSWWIRYFVQTSLEENEP 144 (171)
Q Consensus 79 sprylNkTlPeLaRvs~dgiVif~g~pgq~-~a--k~~elskfgr~----------ak-~RsssWW~r~F~q~~leeNea 144 (171)
.+..+.+.+.++.|+-..|+++++--+|.- +. -+.+...-|+- .. .....||.++-.-.|+.--.+
T Consensus 124 ~~~~~~~~l~~l~~lLPGG~l~lS~~~g~~~~d~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~p~g~~~~~~ 203 (261)
T 3iv6_A 124 TTEEARRACLGMLSLVGSGTVRASVKLGFYDIDLKLIEYGEQSGTLAKFFDPSDKTFHFREAGDVLDRALVPHGLIDKPT 203 (261)
T ss_dssp CHHHHHHHHHHHHHHHTTSEEEEEEEBSCCHHHHHHHHHHHTTTCHHHHEETTTTEEEGGGTTHHHHHHCCCCTTCCHHH
T ss_pred CHHHHHHHHHHHHHhCcCcEEEEEeccCcccccHHHHHHHHhcCCeeeeecCcccceehhhhhhHHHhccCCCCcccHHH
Confidence 999999999999998888888887544422 11 11121111110 01 334567776666666655556
Q ss_pred HHHHHHH
Q 030792 145 AVKKFEQ 151 (171)
Q Consensus 145 ~~kkfeq 151 (171)
+++.+..
T Consensus 204 ~~~~~~~ 210 (261)
T 3iv6_A 204 LLEWYRR 210 (261)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6555444
No 78
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.10 E-value=4.4e-07 Score=73.84 Aligned_cols=129 Identities=12% Similarity=0.126 Sum_probs=86.3
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeee-----eecCCCCCCCCcccEEEEcccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVA-----DIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRva-----dikfpLPYR~KSFslVivSDaLdy 77 (171)
+||++|-|++.....|.+ .+.+..|||+++-- -..|+. +|+--.. +.-..+|+...+||+|+++++|+|
T Consensus 110 ~VLDiGcG~G~~~~~l~~-~g~~v~gvD~s~~~--~~~a~~---~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h 183 (416)
T 4e2x_A 110 FIVEIGCNDGIMLRTIQE-AGVRHLGFEPSSGV--AAKARE---KGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCH 183 (416)
T ss_dssp EEEEETCTTTTTHHHHHH-TTCEEEEECCCHHH--HHHHHT---TTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGG
T ss_pred EEEEecCCCCHHHHHHHH-cCCcEEEECCCHHH--HHHHHH---cCCCcceeeechhhHhhcccCCCCEEEEEECChHHh
Confidence 799999999998888774 56789999997521 222332 2332111 112346777899999999999999
Q ss_pred cChhhhhchhhhhhhhccCceEEEecCCCcchhhhhhhhhc----CCCccccchhHHHHHHHHhcccc
Q 030792 78 LSPKYLNKTLPDLARVASDGVLIFAGYPGQQRAKVAELSKF----GRPAKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 78 LsprylNkTlPeLaRvs~dgiVif~g~pgq~~ak~~elskf----gr~ak~RsssWW~r~F~q~~lee 141 (171)
+. ..++.|-++.|+-+.|=++++..|.... ..+...| .......+...|.+.|.++|++.
T Consensus 184 ~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~--~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~ 247 (416)
T 4e2x_A 184 IP--YVQSVLEGVDALLAPDGVFVFEDPYLGD--IVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFEL 247 (416)
T ss_dssp CT--THHHHHHHHHHHEEEEEEEEEEEECHHH--HHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEE
T ss_pred cC--CHHHHHHHHHHHcCCCeEEEEEeCChHH--hhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEE
Confidence 96 6889999999987765444444554321 1111112 33445567788999999998753
No 79
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.09 E-value=2e-05 Score=62.39 Aligned_cols=139 Identities=11% Similarity=0.192 Sum_probs=91.2
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhH-hc---ce--eeeeecCCCCCCCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH-KG---IV--RVADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~-kG---~V--RvadikfpLPYR~KSFslVivSDa 74 (171)
.+||+||.|++.....|++.- +....|++.-+ .-..++..+. .| .| ..+|+.-+.|+-+++||+|+.+++
T Consensus 181 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~---~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 181 RTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPT---TRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEECGG---GHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHH---HHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 479999999999999998653 45677776522 3333333332 23 23 456663332224577999999999
Q ss_pred ccccChhhhhchhhhhhhhcc-CceEEEec--CCCcch----hhhhhhhhc--CCCccccchhHHHHHHHHhccccch
Q 030792 75 LDYLSPKYLNKTLPDLARVAS-DGVLIFAG--YPGQQR----AKVAELSKF--GRPAKMRSSSWWIRYFVQTSLEENE 143 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRvs~-dgiVif~g--~pgq~~----ak~~elskf--gr~ak~RsssWW~r~F~q~~leeNe 143 (171)
|.|+++....+.|.++.|+-+ +|.+++.- .|.... ....++.-+ -...+.|+...|.+.|.++|++.-+
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 258 LHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceee
Confidence 999999999999999998755 56555543 333211 122222221 1124578999999999999997654
No 80
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.09 E-value=1.1e-05 Score=60.36 Aligned_cols=88 Identities=14% Similarity=0.049 Sum_probs=63.8
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCC-CCcccEEEEcccccccCh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYR-AKSFPLVIVSDALDYLSP 80 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR-~KSFslVivSDaLdyLsp 80 (171)
.+||++|.|++.....|.+. +.+..||++++- .-..|+.....--+..+|+.-++|+. ..+||+|+.++
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~------- 119 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPE--LLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR------- 119 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGG-SSEEEEEESCHH--HHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES-------
T ss_pred CeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHH--HHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC-------
Confidence 36999999999988888765 678999988753 22233333333456778987789998 89999999872
Q ss_pred hhhhchhhhhhhhcc-CceEE
Q 030792 81 KYLNKTLPDLARVAS-DGVLI 100 (171)
Q Consensus 81 rylNkTlPeLaRvs~-dgiVi 100 (171)
...+.|.++.|+-+ +|.++
T Consensus 120 -~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 -GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp -CCSGGGGGHHHHEEEEEEEE
T ss_pred -CHHHHHHHHHHHcCCCcEEE
Confidence 45577888888765 45555
No 81
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.06 E-value=5.8e-06 Score=61.46 Aligned_cols=98 Identities=8% Similarity=-0.041 Sum_probs=69.3
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhc--ceeeeeecCCCCCCC-----CcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG--IVRVADIKFPLPYRA-----KSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG--~VRvadikfpLPYR~-----KSFslVivSDa 74 (171)
.+||++|.||+.....|.+.. .+..||++++. +-..|+...... -+.++|+ ..+|... .+||+|+.+.+
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~-~~v~gvD~s~~--~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFF-PRVIGLDVSKS--ALEIAAKENTAANISYRLLDG-LVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHS-SCEEEEESCHH--HHHHHHHHSCCTTEEEEECCT-TCHHHHHHHHHHHCSCEEEEESS
T ss_pred CeEEEEcCCCCHHHHHHHHhC-CCEEEEECCHH--HHHHHHHhCcccCceEEECcc-cccccccccccccCccEEEEcch
Confidence 379999999999988888554 48899988652 333444444322 3455666 3333221 34999999999
Q ss_pred ccccChhhhhchhhhhhhhccC-ceEEEec
Q 030792 75 LDYLSPKYLNKTLPDLARVASD-GVLIFAG 103 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRvs~d-giVif~g 103 (171)
+.|+++....+.|.++.|+-+. |.++++-
T Consensus 134 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 134 FHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp STTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 9999999999999999998664 6555444
No 82
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.05 E-value=6e-06 Score=63.63 Aligned_cols=134 Identities=13% Similarity=0.157 Sum_probs=86.6
Q ss_pred ccceeecCCchhHhHhhhhc-ccccccccccccc--cchhHHHHH-------------H-hHhc----------------
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDI--EDADARCKS-------------L-VHKG---------------- 48 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e~teAWGVEPyd~--~d~d~~Cks-------------L-v~kG---------------- 48 (171)
.+||++|-||+. .+.++.. ...+..||++++- +-+..+++. + ...|
T Consensus 73 ~~vLDiGcG~G~-~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 151 (289)
T 2g72_A 73 RTLIDIGSGPTV-YQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARV 151 (289)
T ss_dssp SEEEEETCTTCC-GGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHE
T ss_pred CeEEEECCCcCh-HHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhh
Confidence 369999999988 5555543 4668899998652 112222110 0 0122
Q ss_pred -ceeeeeecCCCCCC-----CCcccEEEEcccccccChh--hhhchhhhhhhhcc-CceEEEecCCCcchhhhhhhhhcC
Q 030792 49 -IVRVADIKFPLPYR-----AKSFPLVIVSDALDYLSPK--YLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFG 119 (171)
Q Consensus 49 -~VRvadikfpLPYR-----~KSFslVivSDaLdyLspr--ylNkTlPeLaRvs~-dgiVif~g~pgq~~ak~~elskfg 119 (171)
-+..+|+.-++|+. ..+||+|+++.+|.|+.+. .+.+.|.++.|+-+ .|.+++++.-... ....|
T Consensus 152 ~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~------~~~~~ 225 (289)
T 2g72_A 152 KRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEES------WYLAG 225 (289)
T ss_dssp EEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCC------EEEET
T ss_pred ceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcc------eEEcC
Confidence 13456886657754 4569999999999998876 78899999999865 5677776521111 00011
Q ss_pred C---CccccchhHHHHHHHHhccccc
Q 030792 120 R---PAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 120 r---~ak~RsssWW~r~F~q~~leeN 142 (171)
. +....+...|.+.|.++|++.-
T Consensus 226 ~~~~~~~~~~~~~l~~~l~~aGf~~~ 251 (289)
T 2g72_A 226 EARLTVVPVSEEEVREALVRSGYKVR 251 (289)
T ss_dssp TEEEECCCCCHHHHHHHHHHTTEEEE
T ss_pred CeeeeeccCCHHHHHHHHHHcCCeEE
Confidence 1 2345578889999999998643
No 83
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.04 E-value=1.6e-05 Score=63.09 Aligned_cols=136 Identities=16% Similarity=0.188 Sum_probs=89.4
Q ss_pred ccceeecCCc---hhHhHhhhhc-ccccccccccccccchhHHHHHHhH-hcc--eeeeeecCC------------CCCC
Q 030792 2 HKVLHVGPDT---CSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVH-KGI--VRVADIKFP------------LPYR 62 (171)
Q Consensus 2 ~kVLHvGP~t---C~vVs~llke-e~teAWGVEPyd~~d~d~~CksLv~-kG~--VRvadikfp------------LPYR 62 (171)
.+||++|-|+ ..+...+++. .+.+..||+.+.. .-..++.++. .+. +..+|+.-+ +|+
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~--~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~- 155 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPM--VLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDF- 155 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHH--HHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCT-
T ss_pred CEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChH--HHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCC-
Confidence 4799999999 8765544432 3568889887632 2334444442 233 356777321 343
Q ss_pred CCcccEEEEcccccccChhhhhchhhhhhhh-ccCceEEEecCCCc---chhhhhh-hhhcCCCccccchhHHHHHHHHh
Q 030792 63 AKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQ---QRAKVAE-LSKFGRPAKMRSSSWWIRYFVQT 137 (171)
Q Consensus 63 ~KSFslVivSDaLdyLsprylNkTlPeLaRv-s~dgiVif~g~pgq---~~ak~~e-lskfgr~ak~RsssWW~r~F~q~ 137 (171)
.+|++|+.+.+|-|+++....+.|.++.|+ ...|.++++-.... ...++.+ ....|.|..+|+..-|.++| .
T Consensus 156 -~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ei~~~l--~ 232 (274)
T 2qe6_A 156 -SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARITRENLGEGWARTPEEIERQF--G 232 (274)
T ss_dssp -TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHHHHSCCCCBCHHHHHHTT--T
T ss_pred -CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHhcCCCCccCCHHHHHHHh--C
Confidence 389999999999999988888999999995 45566665543221 1112222 33446688899999999999 4
Q ss_pred ccccch
Q 030792 138 SLEENE 143 (171)
Q Consensus 138 ~leeNe 143 (171)
|++.-+
T Consensus 233 G~~l~~ 238 (274)
T 2qe6_A 233 DFELVE 238 (274)
T ss_dssp TCEECT
T ss_pred CCeEcc
Confidence 776444
No 84
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.03 E-value=4e-05 Score=56.58 Aligned_cols=114 Identities=15% Similarity=0.214 Sum_probs=69.8
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccc--cchhHHHHHHhHhcc----eeeeeecCCCC--CCCCcccEEEEc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI--EDADARCKSLVHKGI----VRVADIKFPLP--YRAKSFPLVIVS 72 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~--~d~d~~CksLv~kG~----VRvadikfpLP--YR~KSFslVivS 72 (171)
.+||++|.|++.+...|.+.. +....|||+++- +.+..+++ +.|+ +..+|+. .+| +...+||+|++.
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~---~~~~~~v~~~~~d~~-~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVL---EVGVPNIKLLWVDGS-DLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH---HHCCSSEEEEECCSS-CGGGTSCTTCCSEEEEE
T ss_pred CeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHH---HcCCCCEEEEeCCHH-HHHhhcCCCCCCEEEEE
Confidence 369999999999988888664 568999998642 22333433 2343 4567773 466 778899999876
Q ss_pred ccccccChhh------hhchhhhhhhh-ccCceEEEec-CCCcchhhhhhhhhcC
Q 030792 73 DALDYLSPKY------LNKTLPDLARV-ASDGVLIFAG-YPGQQRAKVAELSKFG 119 (171)
Q Consensus 73 DaLdyLspry------lNkTlPeLaRv-s~dgiVif~g-~pgq~~ak~~elskfg 119 (171)
-...+...++ ....+.++.|+ ..+|++++.. .+.+...-...+.+.|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g 173 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYG 173 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCC
Confidence 4333322222 23466777774 5577777765 3344433334444444
No 85
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.01 E-value=6.2e-06 Score=56.01 Aligned_cols=97 Identities=9% Similarity=0.064 Sum_probs=67.7
Q ss_pred cceeecCCchhHhHhhhhc--ccccccccccccccchhHHHHHHhHhcceeeeeecCCCC--------CCCCcccEEEEc
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLP--------YRAKSFPLVIVS 72 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLP--------YR~KSFslVivS 72 (171)
+||++|.|++.....|.+. .+.+..|||+.++.+. ..--+..+|+ ..+| +...+||+|++.
T Consensus 25 ~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~--------~~~~~~~~d~-~~~~~~~~~~~~~~~~~~D~i~~~ 95 (180)
T 1ej0_A 25 TVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPI--------VGVDFLQGDF-RDELVMKALLERVGDSKVQVVMSD 95 (180)
T ss_dssp EEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCC--------TTEEEEESCT-TSHHHHHHHHHHHTTCCEEEEEEC
T ss_pred eEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccccc--------CcEEEEEccc-ccchhhhhhhccCCCCceeEEEEC
Confidence 6999999999988888876 2478999999885433 2233456777 4445 667899999998
Q ss_pred ccccccChhh---------hhchhhhhhhhc-cCceEEEecCCCcc
Q 030792 73 DALDYLSPKY---------LNKTLPDLARVA-SDGVLIFAGYPGQQ 108 (171)
Q Consensus 73 DaLdyLspry---------lNkTlPeLaRvs-~dgiVif~g~pgq~ 108 (171)
..+.+..-.. ..+.+.++.|+- .+|.++++......
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 96 MAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred CCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 7777654332 246777777765 45777776654443
No 86
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.01 E-value=8e-06 Score=60.72 Aligned_cols=97 Identities=20% Similarity=0.243 Sum_probs=67.8
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEc-cccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALDYL 78 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivS-DaLdyL 78 (171)
.+||++|.|++.....|.+. +.+..|||+++- +-+..+++..-..--+..+|+ ..+|.. .+||+|+.. ..+.|+
T Consensus 43 ~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~-~~~~~~-~~fD~v~~~~~~~~~~ 119 (252)
T 1wzn_A 43 RRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDV-LEIAFK-NEFDAVTMFFSTIMYF 119 (252)
T ss_dssp CEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCG-GGCCCC-SCEEEEEECSSGGGGS
T ss_pred CEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECCh-hhcccC-CCccEEEEcCCchhcC
Confidence 37999999999998888854 678999988642 223333322111123556777 445654 689999986 677888
Q ss_pred Chhhhhchhhhhhhhcc-CceEEE
Q 030792 79 SPKYLNKTLPDLARVAS-DGVLIF 101 (171)
Q Consensus 79 sprylNkTlPeLaRvs~-dgiVif 101 (171)
++..+.+.|.++.|+-+ +|++|+
T Consensus 120 ~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 120 DEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEE
Confidence 88899999999999765 555554
No 87
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.98 E-value=1.5e-05 Score=57.96 Aligned_cols=98 Identities=16% Similarity=0.154 Sum_probs=64.1
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhHh-cceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHK-GIVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~k-G~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
.+||++|.|++.....|.+....+..|||..+- +-+..+++..--. --+..+|+ . ++-..+||+|++...+++
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~--~~~~~~fD~i~~~~~~~~- 137 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSL-L--ADVDGKFDLIVANILAEI- 137 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESST-T--TTCCSCEEEEEEESCHHH-
T ss_pred CEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccc-c--ccCCCCceEEEECCcHHH-
Confidence 369999999998888877655568899988652 2233333322111 23455666 2 234689999999876655
Q ss_pred Chhhhhchhhhhhhh-ccCceEEEecCCCc
Q 030792 79 SPKYLNKTLPDLARV-ASDGVLIFAGYPGQ 107 (171)
Q Consensus 79 sprylNkTlPeLaRv-s~dgiVif~g~pgq 107 (171)
+.+.+.++.|+ ..+|.+++++....
T Consensus 138 ----~~~~l~~~~~~L~~gG~l~~~~~~~~ 163 (205)
T 3grz_A 138 ----LLDLIPQLDSHLNEDGQVIFSGIDYL 163 (205)
T ss_dssp ----HHHHGGGSGGGEEEEEEEEEEEEEGG
T ss_pred ----HHHHHHHHHHhcCCCCEEEEEecCcc
Confidence 46778888886 45677777654433
No 88
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=97.94 E-value=8.9e-05 Score=60.13 Aligned_cols=135 Identities=20% Similarity=0.201 Sum_probs=90.2
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhH-hc---c--eeeeeecC---CCCCCCCcccEEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH-KG---I--VRVADIKF---PLPYRAKSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~-kG---~--VRvadikf---pLPYR~KSFslViv 71 (171)
.+||+||-|++.....|++.- +.+..|++. .+.-..++..+. .| . +..+|+-- |+| .+||+|+.
T Consensus 181 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p---~~~D~v~~ 254 (363)
T 3dp7_A 181 KRLLDIGGNTGKWATQCVQYNKEVEVTIVDL---PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP---TGFDAVWM 254 (363)
T ss_dssp SEEEEESCTTCHHHHHHHHHSTTCEEEEEEC---HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC---CCCSEEEE
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC---HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC---CCcCEEEE
Confidence 479999999999999998653 456777764 233334444332 22 2 44577744 345 79999999
Q ss_pred cccccccChhhhhchhhhhhhh-ccCceEEEec--CCCcchhhh----hhhh-----hcCCCccccchhHHHHHHHHhcc
Q 030792 72 SDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG--YPGQQRAKV----AELS-----KFGRPAKMRSSSWWIRYFVQTSL 139 (171)
Q Consensus 72 SDaLdyLsprylNkTlPeLaRv-s~dgiVif~g--~pgq~~ak~----~els-----kfgr~ak~RsssWW~r~F~q~~l 139 (171)
+.+|.++++...-+.|.++.|+ ..+|.+++.- .|.+..... ...+ -.+...+.|+..=|.+.|.++|+
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf 334 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGL 334 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTE
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCC
Confidence 9999999999888899999986 4567666643 333221110 0010 11334567888999999999998
Q ss_pred ccc
Q 030792 140 EEN 142 (171)
Q Consensus 140 eeN 142 (171)
+.-
T Consensus 335 ~~v 337 (363)
T 3dp7_A 335 EVE 337 (363)
T ss_dssp EES
T ss_pred eEE
Confidence 754
No 89
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=97.93 E-value=4.9e-05 Score=60.05 Aligned_cols=135 Identities=19% Similarity=0.140 Sum_probs=86.5
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHh-Hhc---cee--eeeecCCCCCCCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKG---IVR--VADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv-~kG---~VR--vadikfpLPYR~KSFslVivSDa 74 (171)
.+||+||-||+.....|++.- +....|++. ...-..++.-+ +.| .|+ .+|+--|+|- +||+|+.+++
T Consensus 171 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~---~~D~v~~~~v 244 (332)
T 3i53_A 171 GHVVDVGGGSGGLLSALLTAHEDLSGTVLDL---QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA---GAGGYVLSAV 244 (332)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC---SCSEEEEESC
T ss_pred CEEEEeCCChhHHHHHHHHHCCCCeEEEecC---HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC---CCcEEEEehh
Confidence 479999999999998888643 345666643 33333333322 233 344 5666445554 8999999999
Q ss_pred ccccChhhhhchhhhhhhhc-cCceEEEec--CCCcchhhhhhhhhc-CCCccccchhHHHHHHHHhccccc
Q 030792 75 LDYLSPKYLNKTLPDLARVA-SDGVLIFAG--YPGQQRAKVAELSKF-GRPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRvs-~dgiVif~g--~pgq~~ak~~elskf-gr~ak~RsssWW~r~F~q~~leeN 142 (171)
|.|.+....-+.|-++.|+- .+|.++++- .|........++.-+ .-..+.|+..-|.+.|.++|++.-
T Consensus 245 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 316 (332)
T 3i53_A 245 LHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVR 316 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEE
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEE
Confidence 99999998899999999874 456665543 232211112222110 122456888889999999998753
No 90
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.92 E-value=9.8e-06 Score=62.44 Aligned_cols=133 Identities=12% Similarity=0.105 Sum_probs=81.1
Q ss_pred ccceeecCCchhHhHhhh-hcccccccccccccc--cchhHH-----------------H---------HHH---hHhcc
Q 030792 2 HKVLHVGPDTCSVVSTLL-KEEETEAWGVEPYDI--EDADAR-----------------C---------KSL---VHKGI 49 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~ll-kee~teAWGVEPyd~--~d~d~~-----------------C---------ksL---v~kG~ 49 (171)
.+||++|-|+. +-+.++ +..-.+.-|++.++- +-+..+ | ... ++..+
T Consensus 57 ~~vLDiGCG~G-~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i 135 (263)
T 2a14_A 57 DTLIDIGSGPT-IYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAV 135 (263)
T ss_dssp EEEEESSCTTC-CGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHE
T ss_pred ceEEEeCCCcc-HHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhh
Confidence 36999999995 444444 333356888877641 111111 1 000 12222
Q ss_pred --eeeeeecCCCCCC---CCcccEEEEcccccccCh--hhhhchhhhhhhhc-cCceEEEecCCCcchhhhhhhhhcCC-
Q 030792 50 --VRVADIKFPLPYR---AKSFPLVIVSDALDYLSP--KYLNKTLPDLARVA-SDGVLIFAGYPGQQRAKVAELSKFGR- 120 (171)
Q Consensus 50 --VRvadikfpLPYR---~KSFslVivSDaLdyLsp--rylNkTlPeLaRvs-~dgiVif~g~pgq~~ak~~elskfgr- 120 (171)
+.++|+.-+.|+. ..+||+|+.+-+|+|+.| ..+-+.|.++.|+= ..|.+|+++.-++..- ..|.
T Consensus 136 ~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~------~~g~~ 209 (263)
T 2a14_A 136 KRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSY------MVGKR 209 (263)
T ss_dssp EEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEE------EETTE
T ss_pred heEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccc------eeCCe
Confidence 6788997656653 569999999999999864 45667899999965 4677788763222100 0121
Q ss_pred -Ccc-ccchhHHHHHHHHhcccc
Q 030792 121 -PAK-MRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 121 -~ak-~RsssWW~r~F~q~~lee 141 (171)
... .-+...|.+.+.++|++.
T Consensus 210 ~~~~~~~~~~~l~~~l~~aGF~i 232 (263)
T 2a14_A 210 EFSCVALEKGEVEQAVLDAGFDI 232 (263)
T ss_dssp EEECCCCCHHHHHHHHHHTTEEE
T ss_pred EeeccccCHHHHHHHHHHCCCEE
Confidence 111 126678999999999754
No 91
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.91 E-value=2.5e-05 Score=60.60 Aligned_cols=134 Identities=16% Similarity=0.155 Sum_probs=78.4
Q ss_pred cceeecCCchhHh----Hhhhhcc-cc--cccccccccccchhHHHHHHhHh--c--ceee----eeecCCC------CC
Q 030792 3 KVLHVGPDTCSVV----STLLKEE-ET--EAWGVEPYDIEDADARCKSLVHK--G--IVRV----ADIKFPL------PY 61 (171)
Q Consensus 3 kVLHvGP~tC~vV----s~llkee-~t--eAWGVEPyd~~d~d~~CksLv~k--G--~VRv----adikfpL------PY 61 (171)
+||+||.||+.+- +.|+... +. +..||||+.-- -..++..+.+ | .|++ +|+. ++ |+
T Consensus 55 ~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~m--l~~a~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~ 131 (292)
T 2aot_A 55 KILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQ--IAKYKELVAKTSNLENVKFAWHKETSS-EYQSRMLEKK 131 (292)
T ss_dssp EEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHH--HHHHHHHHHTCSSCTTEEEEEECSCHH-HHHHHHHTTT
T ss_pred eEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHH--HHHHHHHHHhccCCCcceEEEEecchh-hhhhhhcccc
Confidence 6999999999753 3444221 22 23889987521 1223333332 3 2322 2331 23 36
Q ss_pred CCCcccEEEEcccccccChhhhhchhhhhhhh-ccCceEEEec-CCCcc-hhhhhhh-hhcCC--CccccchhHHHHHHH
Q 030792 62 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG-YPGQQ-RAKVAEL-SKFGR--PAKMRSSSWWIRYFV 135 (171)
Q Consensus 62 R~KSFslVivSDaLdyLsprylNkTlPeLaRv-s~dgiVif~g-~pgq~-~ak~~el-skfgr--~ak~RsssWW~r~F~ 135 (171)
...+||+|+++.+|.|+. .+.++|.++.|+ ..+|.++++- .+... ..-..+. .+++. .....+..=|.+.+.
T Consensus 132 ~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLD 209 (292)
T ss_dssp CCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHH
T ss_pred CCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHH
Confidence 688999999999999996 357899999998 5566666653 22111 1111111 12222 234456667889999
Q ss_pred Hhcccc
Q 030792 136 QTSLEE 141 (171)
Q Consensus 136 q~~lee 141 (171)
++|++.
T Consensus 210 ~aGf~~ 215 (292)
T 2aot_A 210 NLGLKY 215 (292)
T ss_dssp HHTCCE
T ss_pred HCCCce
Confidence 999753
No 92
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.90 E-value=0.0002 Score=57.29 Aligned_cols=134 Identities=12% Similarity=0.122 Sum_probs=86.9
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHh-Hhcc---e--eeeeecCCCCCCCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKGI---V--RVADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv-~kG~---V--RvadikfpLPYR~KSFslVivSDa 74 (171)
.+||+||.|++.....|++.- +.+..|+++ ..+-..++..+ +.|+ | ..+|+ +.+|+. .+|+|+.+.+
T Consensus 192 ~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~--~~D~v~~~~v 265 (359)
T 1x19_A 192 KKMIDVGGGIGDISAAMLKHFPELDSTILNL---PGAIDLVNENAAEKGVADRMRGIAVDI-YKESYP--EADAVLFCRI 265 (359)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTCEEEEEEC---GGGHHHHHHHHHHTTCTTTEEEEECCT-TTSCCC--CCSEEEEESC
T ss_pred CEEEEECCcccHHHHHHHHHCCCCeEEEEec---HHHHHHHHHHHHhcCCCCCEEEEeCcc-ccCCCC--CCCEEEEech
Confidence 479999999999999888653 457788876 22233333332 2232 3 45777 444654 3499999999
Q ss_pred ccccChhhhhchhhhhhhhcc-CceEEEec--CCCcchhhh----hhhhhc--CCC-ccccchhHHHHHHHHhcccc
Q 030792 75 LDYLSPKYLNKTLPDLARVAS-DGVLIFAG--YPGQQRAKV----AELSKF--GRP-AKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRvs~-dgiVif~g--~pgq~~ak~----~elskf--gr~-ak~RsssWW~r~F~q~~lee 141 (171)
|.++++....+.|-++.|+-+ +|.++++- .|.....-. .-+..+ |+. ..+|+..-|.+.|.++|++.
T Consensus 266 lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~ 342 (359)
T 1x19_A 266 LYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKD 342 (359)
T ss_dssp GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEE
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCce
Confidence 999999999999999999855 56665544 232210000 011111 322 23488899999999999874
No 93
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.89 E-value=2.4e-05 Score=56.84 Aligned_cols=98 Identities=9% Similarity=-0.025 Sum_probs=62.0
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccChh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 81 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLspr 81 (171)
.+||++|-|++.+...|.+....+..|||..+- +-..++.-.+.--+..+|+ +.+| .+||+||+...+.++...
T Consensus 53 ~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~--~~~~a~~~~~~~~~~~~d~-~~~~---~~~D~v~~~~p~~~~~~~ 126 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYLLGAESVTAFDIDPD--AIETAKRNCGGVNFMVADV-SEIS---GKYDTWIMNPPFGSVVKH 126 (200)
T ss_dssp SEEEEETCTTCHHHHHHHHTTBSEEEEEESCHH--HHHHHHHHCTTSEEEECCG-GGCC---CCEEEEEECCCC------
T ss_pred CEEEEEeCCccHHHHHHHHcCCCEEEEEECCHH--HHHHHHHhcCCCEEEECcH-HHCC---CCeeEEEECCCchhccCc
Confidence 369999999999888887664456899987542 2223333322345677888 4566 689999998888887654
Q ss_pred hhhchhhhhhhhccCceEEEecCCCc
Q 030792 82 YLNKTLPDLARVASDGVLIFAGYPGQ 107 (171)
Q Consensus 82 ylNkTlPeLaRvs~dgiVif~g~pgq 107 (171)
...+.+.++.|+. |+++.+-.|+.
T Consensus 127 ~~~~~l~~~~~~~--g~~~~~~~~~~ 150 (200)
T 1ne2_A 127 SDRAFIDKAFETS--MWIYSIGNAKA 150 (200)
T ss_dssp -CHHHHHHHHHHE--EEEEEEEEGGG
T ss_pred hhHHHHHHHHHhc--CcEEEEEcCch
Confidence 4446778888887 55554444544
No 94
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.88 E-value=3.5e-05 Score=61.75 Aligned_cols=132 Identities=11% Similarity=0.143 Sum_probs=86.8
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhHhc-ceeeeeecCCCCCCCCcccEEEEcccccccC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDYLS 79 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~kG-~VRvadikfpLPYR~KSFslVivSDaLdyLs 79 (171)
.+||+||.|++.....|++.- +.+..|+++-++- ..++.+ .+ -+..+|+--++| +||+|+.+++|.|++
T Consensus 190 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~---~~a~~~--~~v~~~~~d~~~~~p----~~D~v~~~~~lh~~~ 260 (352)
T 1fp2_A 190 ESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVV---ENLSGS--NNLTYVGGDMFTSIP----NADAVLLKYILHNWT 260 (352)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHH---TTCCCB--TTEEEEECCTTTCCC----CCSEEEEESCGGGSC
T ss_pred ceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHH---hhcccC--CCcEEEeccccCCCC----CccEEEeehhhccCC
Confidence 479999999999999998653 4566777652221 112211 22 234577744666 399999999999999
Q ss_pred hhhhhchhhhhhhhcc----CceEEEec--CCCcc-------hhhhhhhhhcCCCccccchhHHHHHHHHhccccc
Q 030792 80 PKYLNKTLPDLARVAS----DGVLIFAG--YPGQQ-------RAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 80 prylNkTlPeLaRvs~----dgiVif~g--~pgq~-------~ak~~elskfgr~ak~RsssWW~r~F~q~~leeN 142 (171)
....-+.|-++.|+-+ +|.++++- .|... .....++.-+....+.|+..-|.+.|.++|++.-
T Consensus 261 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 336 (352)
T 1fp2_A 261 DKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHY 336 (352)
T ss_dssp HHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCee
Confidence 8888899999999865 68776654 23221 1112222111111556888999999999998743
No 95
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.86 E-value=7.3e-05 Score=52.07 Aligned_cols=102 Identities=13% Similarity=0.076 Sum_probs=67.3
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHh---cceeeeeecCCCCCCCCcccEEEEccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK---GIVRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~k---G~VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
.+||++|.|++.....|.+. +.+..|||+.+ ++.+..++...--. --+..+|+.-++| ..+||+|++...+.
T Consensus 54 ~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~~~ 130 (194)
T 1dus_A 54 DDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITNPPIR 130 (194)
T ss_dssp CEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEECCCST
T ss_pred CeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEECCCcc
Confidence 37999999999998888876 88899998764 22233333321111 2345567654444 77999999876554
Q ss_pred ccChhhhhchhhhhhhhcc-CceEEEecCCCc
Q 030792 77 YLSPKYLNKTLPDLARVAS-DGVLIFAGYPGQ 107 (171)
Q Consensus 77 yLsprylNkTlPeLaRvs~-dgiVif~g~pgq 107 (171)
+ ....+.+.+.++.|+-+ +|.++++....+
T Consensus 131 ~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 131 A-GKEVLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp T-CHHHHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred c-chhHHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 3 35667788888888655 566666654443
No 96
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.86 E-value=2.7e-05 Score=62.46 Aligned_cols=136 Identities=16% Similarity=0.197 Sum_probs=87.8
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhHhc--ceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~kG--~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
.+||+||-|++.....|++.- +....|+++.++.. ..+.+..-..+ -+..+|+--++| +||+|+.+++|.++
T Consensus 186 ~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~-~~~~~~~~~~~~v~~~~~d~~~~~p----~~D~v~~~~vlh~~ 260 (348)
T 3lst_A 186 GTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA-RHRLDAPDVAGRWKVVEGDFLREVP----HADVHVLKRILHNW 260 (348)
T ss_dssp EEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT-TCCCCCGGGTTSEEEEECCTTTCCC----CCSEEEEESCGGGS
T ss_pred ceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh-cccccccCCCCCeEEEecCCCCCCC----CCcEEEEehhccCC
Confidence 379999999999999998643 44566666543322 11111000112 234677755777 89999999999999
Q ss_pred Chhhhhchhhhhhhhcc-CceEEEec--CCCcc---hhhhhhhhhc-CCCccccchhHHHHHHHHhccccc
Q 030792 79 SPKYLNKTLPDLARVAS-DGVLIFAG--YPGQQ---RAKVAELSKF-GRPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 79 sprylNkTlPeLaRvs~-dgiVif~g--~pgq~---~ak~~elskf-gr~ak~RsssWW~r~F~q~~leeN 142 (171)
++...-+.|-++.|+-+ +|.+++.- .|... .....++.-+ ....+.|+..-|.+.|.++|++.-
T Consensus 261 ~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 331 (348)
T 3lst_A 261 GDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLD 331 (348)
T ss_dssp CHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceE
Confidence 99988899999999865 56655543 23221 1112222111 123467889999999999998754
No 97
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.84 E-value=3.1e-05 Score=55.21 Aligned_cols=101 Identities=14% Similarity=0.166 Sum_probs=61.6
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHhcc----eeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI----VRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~kG~----VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.||+.....|.+. +.+..|||.++ ++-+..+++. .|+ +..+|...-.++-..+||+|+.+ +
T Consensus 24 ~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~---~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~--~ 97 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSD---LGIENTELILDGHENLDHYVREPIRAAIFN--L 97 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHH---HTCCCEEEEESCGGGGGGTCCSCEEEEEEE--E
T ss_pred CEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHH---cCCCcEEEEeCcHHHHHhhccCCcCEEEEe--C
Confidence 36999999999888888766 88999999875 2334444443 233 23345432222557899999765 2
Q ss_pred cccCh---------hhhhchhhhhhhh-ccCceEEEecCCCcc
Q 030792 76 DYLSP---------KYLNKTLPDLARV-ASDGVLIFAGYPGQQ 108 (171)
Q Consensus 76 dyLsp---------rylNkTlPeLaRv-s~dgiVif~g~pgq~ 108 (171)
.|+.+ ...-+.+.++.|+ ...|.++++.++|..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 140 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHD 140 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC----
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCC
Confidence 44432 4444567778775 557888888887653
No 98
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.74 E-value=2.2e-05 Score=61.71 Aligned_cols=162 Identities=12% Similarity=0.217 Sum_probs=89.6
Q ss_pred ccceeecCCchhHhHhhhhc-cccccccccccc--ccchhHHHHHHhH--------------------------------
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVH-------------------------------- 46 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e~teAWGVEPyd--~~d~d~~CksLv~-------------------------------- 46 (171)
.+||+||.|++.+...|.+. ...+..||+..+ ++.+..+.+....
T Consensus 48 ~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 127 (292)
T 3g07_A 48 RDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFP 127 (292)
T ss_dssp SEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-------------------------------------
T ss_pred CcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccccc
Confidence 47999999999988888765 367889998865 2223333222210
Q ss_pred ---------------------------hcceeeeeecCC----CCCCCCcccEEEEccccccc----Chhhhhchhhhhh
Q 030792 47 ---------------------------KGIVRVADIKFP----LPYRAKSFPLVIVSDALDYL----SPKYLNKTLPDLA 91 (171)
Q Consensus 47 ---------------------------kG~VRvadikfp----LPYR~KSFslVivSDaLdyL----sprylNkTlPeLa 91 (171)
.=-++.+|+.-+ +|+...+||+|++..++.|+ .+..+-+.+-++.
T Consensus 128 ~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~ 207 (292)
T 3g07_A 128 ASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIY 207 (292)
T ss_dssp --------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHH
Confidence 111344555322 24678999999999999999 7778888999999
Q ss_pred hhc-cCceEEEecCCC--cchhh-h-hhhhhcCCCccccchhHHHHHHHH--hccccchHHHHHHHHHHhhccCCCCcee
Q 030792 92 RVA-SDGVLIFAGYPG--QQRAK-V-AELSKFGRPAKMRSSSWWIRYFVQ--TSLEENEPAVKKFEQAASKKSYKPNCQV 164 (171)
Q Consensus 92 Rvs-~dgiVif~g~pg--q~~ak-~-~elskfgr~ak~RsssWW~r~F~q--~~leeNea~~kkfeqa~~k~sy~p~cqi 164 (171)
|+- .+|++|+...|- +.+.+ + .++-..-+.+++++ .=+..++.+ .|.+.-|... -+ ..+...|.-.-++
T Consensus 208 ~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p-~~~~~~L~~~~~GF~~~~~~~-~~--~~~~~g~~r~i~~ 283 (292)
T 3g07_A 208 RHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKP-EQFSSYLTSPDVGFSSYELVA-TP--HNTSKGFQRPVYL 283 (292)
T ss_dssp HHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCG-GGHHHHHTSTTTCCCEEEEC--------------CCCEE
T ss_pred HHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcH-HHHHHHHHhcCCCceEEEEec-cC--CCCCCCccceEEE
Confidence 875 467777765442 21111 1 01111112233443 334556666 6774333221 11 1123456666666
Q ss_pred eec
Q 030792 165 FHL 167 (171)
Q Consensus 165 fhl 167 (171)
|+-
T Consensus 284 ~~k 286 (292)
T 3g07_A 284 FHK 286 (292)
T ss_dssp EEC
T ss_pred EEc
Confidence 654
No 99
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=97.73 E-value=2.2e-05 Score=61.85 Aligned_cols=97 Identities=14% Similarity=0.058 Sum_probs=72.2
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH----------------------hcceeeeeecCCCC
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH----------------------KGIVRVADIKFPLP 60 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~----------------------kG~VRvadikfpLP 60 (171)
+||++|-|+......|.+ .+-+..||+.++-- =..++.... .--+.++|+ +.||
T Consensus 71 ~vLD~GCG~G~~~~~La~-~G~~V~gvD~S~~~--i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~-~~l~ 146 (252)
T 2gb4_A 71 RVFFPLCGKAIEMKWFAD-RGHTVVGVEISEIG--IREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI-FDLP 146 (252)
T ss_dssp EEEETTCTTCTHHHHHHH-TTCEEEEECSCHHH--HHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT-TTGG
T ss_pred eEEEeCCCCcHHHHHHHH-CCCeEEEEECCHHH--HHHHHHhcccccccccccccccccccccCCCceEEEECcc-ccCC
Confidence 699999999998887774 46789999988643 222332221 113567898 8888
Q ss_pred CCC-CcccEEEEcccccccChhhhhchhhhhhhhcc-CceEEEec
Q 030792 61 YRA-KSFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 103 (171)
Q Consensus 61 YR~-KSFslVivSDaLdyLsprylNkTlPeLaRvs~-dgiVif~g 103 (171)
+.. .+||+|+...+|.+|.+....+.+.++.|+-+ .|+++++.
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 874 89999999999999998888888999999665 55654444
No 100
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.70 E-value=5.8e-05 Score=54.54 Aligned_cols=101 Identities=12% Similarity=0.082 Sum_probs=67.6
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHh-HhcceeeeeecCCCC-CCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLP-YRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv-~kG~VRvadikfpLP-YR~KSFslVivSDaLdy 77 (171)
.+||++|.||+.+...+++....+..|||..+ ++-+..+++..- .+--+..+|+.-.++ +...+||+|++.....+
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~ 125 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNV 125 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTTS
T ss_pred CEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCCCc
Confidence 36999999999988878876666899998764 333444443321 111256677633222 34689999987655332
Q ss_pred cChhhhhchhhhhhh---hccCceEEEec
Q 030792 78 LSPKYLNKTLPDLAR---VASDGVLIFAG 103 (171)
Q Consensus 78 LsprylNkTlPeLaR---vs~dgiVif~g 103 (171)
....+.+.+.++.| +..+|++++.-
T Consensus 126 -~~~~~~~~l~~~~~~~~L~pgG~l~~~~ 153 (189)
T 3p9n_A 126 -DSADVDAILAALGTNGWTREGTVAVVER 153 (189)
T ss_dssp -CHHHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred -chhhHHHHHHHHHhcCccCCCeEEEEEe
Confidence 34778889999998 67788877754
No 101
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.68 E-value=5.7e-05 Score=57.03 Aligned_cols=89 Identities=22% Similarity=0.232 Sum_probs=62.0
Q ss_pred cceeecCCchhHhHhhhhc-ccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccChh
Q 030792 3 KVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 81 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke-e~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLspr 81 (171)
+||++|.|++.....|.+. .+.+..|||+++- .-..++.....-.+.++|+ ..+|+...+||+|+++++.
T Consensus 88 ~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~--~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~~------ 158 (269)
T 1p91_A 88 AVLDIGCGEGYYTHAFADALPEITTFGLDVSKV--AIKAAAKRYPQVTFCVASS-HRLPFSDTSMDAIIRIYAP------ 158 (269)
T ss_dssp EEEEETCTTSTTHHHHHHTCTTSEEEEEESCHH--HHHHHHHHCTTSEEEECCT-TSCSBCTTCEEEEEEESCC------
T ss_pred EEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHH--HHHHHHHhCCCcEEEEcch-hhCCCCCCceeEEEEeCCh------
Confidence 6999999998888777765 2678999988643 2223333333334677887 5788888999999987763
Q ss_pred hhhchhhhhhhhcc-CceEEEec
Q 030792 82 YLNKTLPDLARVAS-DGVLIFAG 103 (171)
Q Consensus 82 ylNkTlPeLaRvs~-dgiVif~g 103 (171)
..+.++.|+-+ +|.++++.
T Consensus 159 ---~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 159 ---CKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp ---CCHHHHHHHEEEEEEEEEEE
T ss_pred ---hhHHHHHHhcCCCcEEEEEE
Confidence 35778888766 45555543
No 102
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=97.64 E-value=0.00044 Score=56.21 Aligned_cols=135 Identities=13% Similarity=0.147 Sum_probs=87.0
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHh-Hhc---ce--eeeeecCCCCCCCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKG---IV--RVADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv-~kG---~V--RvadikfpLPYR~KSFslVivSDa 74 (171)
.+||+||-|++.....|++.- +.+..|++. .+.-..++..+ +.| .| ..+|+--|+| . +||+|+.+++
T Consensus 204 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p--~-~~D~v~~~~v 277 (369)
T 3gwz_A 204 ATAVDIGGGRGSLMAAVLDAFPGLRGTLLER---PPVAEEARELLTGRGLADRCEILPGDFFETIP--D-GADVYLIKHV 277 (369)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCC--S-SCSEEEEESC
T ss_pred cEEEEeCCCccHHHHHHHHHCCCCeEEEEcC---HHHHHHHHHhhhhcCcCCceEEeccCCCCCCC--C-CceEEEhhhh
Confidence 479999999999998888653 345566654 23333333332 333 24 4566643444 3 8999999999
Q ss_pred ccccChhhhhchhhhhhhhcc-CceEEEec--CCCcch--hhhhhhhhc-CCCccccchhHHHHHHHHhccccc
Q 030792 75 LDYLSPKYLNKTLPDLARVAS-DGVLIFAG--YPGQQR--AKVAELSKF-GRPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRvs~-dgiVif~g--~pgq~~--ak~~elskf-gr~ak~RsssWW~r~F~q~~leeN 142 (171)
|.|.++...-+.|-++.|+-+ +|.+++.- .|.... ....++.-+ ....+.|+...|.+.|.++|++.-
T Consensus 278 lh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 351 (369)
T 3gwz_A 278 LHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVE 351 (369)
T ss_dssp GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEE
T ss_pred hccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEE
Confidence 999999888889999988755 56555533 333211 112222111 012357889999999999998753
No 103
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.64 E-value=8.4e-05 Score=53.92 Aligned_cols=92 Identities=14% Similarity=0.124 Sum_probs=62.0
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccChh-
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK- 81 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLspr- 81 (171)
+||++|.||+.+...|.+.. +..|||..+-- ++. ..+--+.++|+.- |+...+||+|++.-.+-..+++
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~-~~~-----~~~~~~~~~d~~~--~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRN--TVVSTDLNIRA-LES-----HRGGNLVRADLLC--SINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTS--EEEEEESCHHH-HHT-----CSSSCEEECSTTT--TBCGGGCSEEEECCCCBTTCCCT
T ss_pred eEEEeccCccHHHHHHHhcC--cEEEEECCHHH-Hhc-----ccCCeEEECChhh--hcccCCCCEEEECCCCccCCccc
Confidence 79999999999888888655 89999876432 111 2334567788854 5556899999987555443332
Q ss_pred ------hhhchhhhhhhhccCceEEEecC
Q 030792 82 ------YLNKTLPDLARVASDGVLIFAGY 104 (171)
Q Consensus 82 ------ylNkTlPeLaRvs~dgiVif~g~ 104 (171)
..-..+.++.|...+|.++++..
T Consensus 96 ~~~~~~~~~~~~~~~~~~lpgG~l~~~~~ 124 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAVTVGMLYLLVI 124 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHCCSSEEEEEEE
T ss_pred cccCCcchHHHHHHHHhhCCCCEEEEEEe
Confidence 22345556666668888887653
No 104
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.62 E-value=6.8e-05 Score=55.20 Aligned_cols=92 Identities=15% Similarity=0.101 Sum_probs=60.1
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-hc--ceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KG--IVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-kG--~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
.+||++|.|++.....|.+. ..+..|||+.+- .-..++.... .| -+..+|+.-++| ...+||+||++.++.++
T Consensus 72 ~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~--~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 72 QKVLEIGTGIGYYTALIAEI-VDKVVSVEINEK--MYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAPTL 147 (231)
T ss_dssp CEEEEECCTTSHHHHHHHHH-SSEEEEEESCHH--HHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBSSC
T ss_pred CEEEEEcCCCCHHHHHHHHH-cCEEEEEeCCHH--HHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHHHH
Confidence 37999999998887777754 478899987642 2223333332 12 345667754454 46789999999999988
Q ss_pred Chhhhhchhhhhhhh-ccCceEEEecCC
Q 030792 79 SPKYLNKTLPDLARV-ASDGVLIFAGYP 105 (171)
Q Consensus 79 sprylNkTlPeLaRv-s~dgiVif~g~p 105 (171)
.. ++.|+ ..+|+++++-.+
T Consensus 148 ~~--------~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 148 LC--------KPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp CH--------HHHHTEEEEEEEEEEECS
T ss_pred HH--------HHHHHcCCCcEEEEEEcC
Confidence 64 45554 445666655433
No 105
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.60 E-value=0.00013 Score=52.99 Aligned_cols=90 Identities=17% Similarity=0.122 Sum_probs=59.3
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHh-Hhc----ceeeeeecCCCCCCCCcccEEEEccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV-HKG----IVRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv-~kG----~VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
.+||++|.|++.....|.+. ..+..|||+++- .-..++... +.| -+..+|+.- .+....+||+||++..+.
T Consensus 79 ~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~--~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 79 SRVLEIGTGSGYQTAILAHL-VQHVCSVERIKG--LQWQARRRLKNLDLHNVSTRHGDGWQ-GWQARAPFDAIIVTAAPP 154 (210)
T ss_dssp CEEEEECCTTSHHHHHHHHH-SSEEEEEESCHH--HHHHHHHHHHHTTCCSEEEEESCGGG-CCGGGCCEEEEEESSBCS
T ss_pred CEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHH--HHHHHHHHHHHcCCCceEEEECCccc-CCccCCCccEEEEccchh
Confidence 36999999999888877765 788999998752 222233322 224 245577743 333468999999999998
Q ss_pred ccChhhhhchhhhhhhhc-cCceEEEec
Q 030792 77 YLSPKYLNKTLPDLARVA-SDGVLIFAG 103 (171)
Q Consensus 77 yLsprylNkTlPeLaRvs-~dgiVif~g 103 (171)
++.+ ++.|+- .+|.++++-
T Consensus 155 ~~~~--------~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 155 EIPT--------ALMTQLDEGGILVLPV 174 (210)
T ss_dssp SCCT--------HHHHTEEEEEEEEEEE
T ss_pred hhhH--------HHHHhcccCcEEEEEE
Confidence 8875 344543 455554443
No 106
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.58 E-value=7.6e-05 Score=51.91 Aligned_cols=96 Identities=14% Similarity=0.106 Sum_probs=60.9
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhH--hcceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~--kG~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|.|++.....|.+.. .+..|+|+.+ ++-+..+++..-- .-.+..+|+.-++|.. .+||+||++..+++
T Consensus 35 ~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~~~ 112 (192)
T 1l3i_A 35 DVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGSGGE 112 (192)
T ss_dssp CEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCCTTC
T ss_pred CEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCchHH
Confidence 379999999988887777655 7888988754 2223333332210 1124456764445542 48999999887654
Q ss_pred cChhhhhchhhhhhhhc-cCceEEEecC
Q 030792 78 LSPKYLNKTLPDLARVA-SDGVLIFAGY 104 (171)
Q Consensus 78 LsprylNkTlPeLaRvs-~dgiVif~g~ 104 (171)
+...+.++.|+- .+|.+++...
T Consensus 113 -----~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 113 -----LQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp -----HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred -----HHHHHHHHHHhcCCCcEEEEEec
Confidence 366677777754 4567666554
No 107
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.57 E-value=0.0001 Score=60.11 Aligned_cols=95 Identities=18% Similarity=0.178 Sum_probs=65.5
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-hc-----ceeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KG-----IVRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-kG-----~VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.|++.....|.+....+..|||+.++- ..++..++ .| -+..+|+ ..+|+...+||+||+....
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l---~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIGIECSSIS---DYAVKIVKANKLDHVVTIIKGKV-EEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHH---HHHHHHHHHTTCTTTEEEEESCT-TTCCCSSSCEEEEEECCCB
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEEECcHHHH---HHHHHHHHHcCCCCcEEEEECcH-HHccCCCCceEEEEEcccc
Confidence 3699999999998888887766699999999633 23333333 33 3456777 4556668899999976544
Q ss_pred ccc-Chhhhhchhhhhhhhc-cCceEE
Q 030792 76 DYL-SPKYLNKTLPDLARVA-SDGVLI 100 (171)
Q Consensus 76 dyL-sprylNkTlPeLaRvs-~dgiVi 100 (171)
.++ ....+...+-++.|+- .+|++|
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEc
Confidence 444 3456777777877754 456665
No 108
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.57 E-value=0.00011 Score=56.99 Aligned_cols=94 Identities=19% Similarity=0.256 Sum_probs=61.0
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhHhcc---eeeeeecCCCCCCCCcccEEEEccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHKGI---VRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~kG~---VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
.+||++|.|++.+...+.+.. .+..|||+.+- +.+..+++ +.|+ +..+|+.-++ ...+||+|++.-..
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g-~~v~gvDi~~~~v~~a~~n~~---~~~~~v~~~~~d~~~~~--~~~~fD~Vv~n~~~- 194 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLG-GKALGVDIDPMVLPQAEANAK---RNGVRPRFLEGSLEAAL--PFGPFDLLVANLYA- 194 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTT-CEEEEEESCGGGHHHHHHHHH---HTTCCCEEEESCHHHHG--GGCCEEEEEEECCH-
T ss_pred CEEEEecCCCcHHHHHHHHhC-CeEEEEECCHHHHHHHHHHHH---HcCCcEEEEECChhhcC--cCCCCCEEEECCcH-
Confidence 379999999987777766654 48899987653 22333333 3343 3445664333 35789999975433
Q ss_pred ccChhhhhchhhhhhhh-ccCceEEEecCCC
Q 030792 77 YLSPKYLNKTLPDLARV-ASDGVLIFAGYPG 106 (171)
Q Consensus 77 yLsprylNkTlPeLaRv-s~dgiVif~g~pg 106 (171)
..+...++++.|+ ..+|.++++|...
T Consensus 195 ----~~~~~~l~~~~~~LkpgG~lils~~~~ 221 (254)
T 2nxc_A 195 ----ELHAALAPRYREALVPGGRALLTGILK 221 (254)
T ss_dssp ----HHHHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred ----HHHHHHHHHHHHHcCCCCEEEEEeecc
Confidence 3356788888886 4578888887443
No 109
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.55 E-value=8.4e-05 Score=54.13 Aligned_cols=93 Identities=16% Similarity=0.120 Sum_probs=60.0
Q ss_pred ccceeecCCchhHhHhhhhccc--ccccccccccccchhHHHHHHh-Hhc----ceeeeeecCCCCCCCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE--TEAWGVEPYDIEDADARCKSLV-HKG----IVRVADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~--teAWGVEPyd~~d~d~~CksLv-~kG----~VRvadikfpLPYR~KSFslVivSDa 74 (171)
.+||++|.|++.....|.+..+ .+..|||+.+- .-..|+... +.| -+..+|+..++| ...+||+||++..
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~--~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~ 155 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPE--LAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTTAA 155 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHH--HHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEESSB
T ss_pred CEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHH--HHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEECCc
Confidence 3799999999988888886654 78899987642 222233322 223 244567644444 3678999999999
Q ss_pred ccccChhhhhchhhhhhhhc-cCceEEEecCC
Q 030792 75 LDYLSPKYLNKTLPDLARVA-SDGVLIFAGYP 105 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRvs-~dgiVif~g~p 105 (171)
+.++.. ++.|+- .+|.++++-.+
T Consensus 156 ~~~~~~--------~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 156 GPKIPE--------PLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp BSSCCH--------HHHHTEEEEEEEEEEESS
T ss_pred hHHHHH--------HHHHHcCCCcEEEEEECC
Confidence 998763 455544 45665555433
No 110
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.55 E-value=0.00019 Score=51.57 Aligned_cols=105 Identities=12% Similarity=0.118 Sum_probs=64.7
Q ss_pred cceeecCCchhHhHhhhhc--ccccccccccccc--cchhHHHHHH--hHhcceeeeeecCCCCCCCCcccEEEEcccc-
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDI--EDADARCKSL--VHKGIVRVADIKFPLPYRAKSFPLVIVSDAL- 75 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd~--~d~d~~CksL--v~kG~VRvadikfpLPYR~KSFslVivSDaL- 75 (171)
+||++|.|++.+...|.+. ...+..|||..+- +-+..+++.. -.+=-+..+|+.-..++-..+||+|++.-.+
T Consensus 25 ~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~~ 104 (197)
T 3eey_A 25 TVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGYL 104 (197)
T ss_dssp EEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEESBC
T ss_pred EEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCCcc
Confidence 7999999999988888876 3468899988652 2233333221 0112245677632222666899999865433
Q ss_pred ------cccChhhhhchhhhhhhh-ccCceEEEecCCCc
Q 030792 76 ------DYLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQ 107 (171)
Q Consensus 76 ------dyLsprylNkTlPeLaRv-s~dgiVif~g~pgq 107 (171)
-.-.++..-+.+.++.|+ ..+|.++++.+++.
T Consensus 105 ~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~ 143 (197)
T 3eey_A 105 PSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGG 143 (197)
T ss_dssp TTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBT
T ss_pred cCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCC
Confidence 011233334577788775 45678888876663
No 111
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.54 E-value=9.7e-05 Score=55.29 Aligned_cols=101 Identities=18% Similarity=0.160 Sum_probs=66.1
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHh-c---ceeeeeecCCC--CCCCCcccEEEE-ccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G---IVRVADIKFPL--PYRAKSFPLVIV-SDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~k-G---~VRvadikfpL--PYR~KSFslViv-SDa 74 (171)
.+||++|.||+.....|.+....+.+|||+++- .-..++...+. | .+..+|+ ..+ |+...+||+|++ +..
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~--~l~~a~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPIDEHWIIECNDG--VFQRLRDWAPRQTHKVIPLKGLW-EDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCEEEEEEEECCHH--HHHHHHHHGGGCSSEEEEEESCH-HHHGGGSCTTCEEEEEECCCC
T ss_pred CeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHH--HHHHHHHHHHhcCCCeEEEecCH-HHhhcccCCCceEEEEECCcc
Confidence 369999999999988887655668999998753 22333333322 2 2345565 334 788899999998 555
Q ss_pred c--cccChhhhhchhhhhhhhcc-CceEEEecCC
Q 030792 75 L--DYLSPKYLNKTLPDLARVAS-DGVLIFAGYP 105 (171)
Q Consensus 75 L--dyLsprylNkTlPeLaRvs~-dgiVif~g~p 105 (171)
+ .........+.+.++.|+-+ +|+++|.-+.
T Consensus 139 ~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred cchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 4 22223344466889998865 6677666543
No 112
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.52 E-value=9.2e-05 Score=55.32 Aligned_cols=95 Identities=17% Similarity=0.175 Sum_probs=64.6
Q ss_pred cceeecCCchhHhHhhhhc--ccccccccccccc--cchhHHHHHHhHhcceeeeeecCC--CCCCCCcccEEEEccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFP--LPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd~--~d~d~~CksLv~kG~VRvadikfp--LPYR~KSFslVivSDaLd 76 (171)
+||++|.||+.....|.+. ......|||+.+- +++-.+++.. ..=-+..+|+.-+ +|....+||+|++ |..
T Consensus 80 ~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~-~~~- 156 (233)
T 2ipx_A 80 KVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFA-DVA- 156 (233)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEE-CCC-
T ss_pred EEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEE-cCC-
Confidence 6999999999999888876 3478999998753 4455555543 1122456777543 5666789999996 443
Q ss_pred ccChhhhhchhhhhhhhcc-CceEEEe
Q 030792 77 YLSPKYLNKTLPDLARVAS-DGVLIFA 102 (171)
Q Consensus 77 yLsprylNkTlPeLaRvs~-dgiVif~ 102 (171)
.|......+.++.|+-+ +|++++.
T Consensus 157 --~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 157 --QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp --CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 56555556777777654 5666663
No 113
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.48 E-value=0.00011 Score=58.92 Aligned_cols=129 Identities=16% Similarity=0.122 Sum_probs=83.6
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhHhc-ceeeeeecCCCCCCCCcccEEEEcccccccC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDYLS 79 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~kG-~VRvadikfpLPYR~KSFslVivSDaLdyLs 79 (171)
.+|||||.|++.....|++.- +....|+++.++-+ .++.+ .+ -+..+|+--|+| +||+|+.+.+|.+++
T Consensus 195 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~---~a~~~--~~v~~~~~d~~~~~~----~~D~v~~~~vlh~~~ 265 (358)
T 1zg3_A 195 ESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVG---NLTGN--ENLNFVGGDMFKSIP----SADAVLLKWVLHDWN 265 (358)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHS---SCCCC--SSEEEEECCTTTCCC----CCSEEEEESCGGGSC
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHh---hcccC--CCcEEEeCccCCCCC----CceEEEEcccccCCC
Confidence 479999999999999998653 34556665532221 11111 23 134567744555 499999999999999
Q ss_pred hhhhhchhhhhhhhcc----CceEEEec--CCCcc-------hhhhhhhh---hcCCCccccchhHHHHHHHHhcccc
Q 030792 80 PKYLNKTLPDLARVAS----DGVLIFAG--YPGQQ-------RAKVAELS---KFGRPAKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 80 prylNkTlPeLaRvs~----dgiVif~g--~pgq~-------~ak~~els---kfgr~ak~RsssWW~r~F~q~~lee 141 (171)
....-+.|-++.|+-+ +|.++++- .|... .....++. -+| .+.|+..-|.+.|.++|++.
T Consensus 266 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~--g~~~t~~e~~~ll~~aGf~~ 341 (358)
T 1zg3_A 266 DEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFL--GKERTKQEWEKLIYDAGFSS 341 (358)
T ss_dssp HHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHS--CCCEEHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCC--CCCCCHHHHHHHHHHcCCCe
Confidence 8887899999999865 57666543 23221 11112221 122 25789999999999999864
No 114
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.46 E-value=0.00047 Score=50.11 Aligned_cols=98 Identities=14% Similarity=0.089 Sum_probs=62.3
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccc--cchhHHHHHHh-HhcceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI--EDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~--~d~d~~CksLv-~kG~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|.|++.+...|.+.. ..+..|||+.+- +-+..+++..- ..=-+..+|+.-.+|.- .+||+|+....+.
T Consensus 42 ~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~D~i~~~~~~~- 119 (204)
T 3e05_A 42 LVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL-PDPDRVFIGGSGG- 119 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS-CCCSEEEESCCTT-
T ss_pred CEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC-CCCCEEEECCCCc-
Confidence 379999999988887777654 478899987653 22333333221 11124456764344432 6799999887664
Q ss_pred cChhhhhchhhhhhhh-ccCceEEEecCC
Q 030792 78 LSPKYLNKTLPDLARV-ASDGVLIFAGYP 105 (171)
Q Consensus 78 LsprylNkTlPeLaRv-s~dgiVif~g~p 105 (171)
.+.+.+.++.|+ ..+|.+++....
T Consensus 120 ----~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 120 ----MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp ----CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred ----CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 455777788775 556777776543
No 115
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.44 E-value=0.00036 Score=56.76 Aligned_cols=95 Identities=14% Similarity=0.139 Sum_probs=66.0
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHh-cc-----eeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-GI-----VRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~k-G~-----VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.||+.+...+.+....+..|||+.++ + ..++..+++ |+ +..+|+ ..+|.. .+||+||+...+
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~--~-~~a~~~~~~~~l~~~v~~~~~d~-~~~~~~-~~~D~Ivs~~~~ 126 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGARKIYAVEASTM--A-QHAEVLVKSNNLTDRIVVIPGKV-EEVSLP-EQVDIIISEPMG 126 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTH--H-HHHHHHHHHTTCTTTEEEEESCT-TTCCCS-SCEEEEEECCCB
T ss_pred CEEEEcCCCccHHHHHHHhCCCCEEEEECCHHH--H-HHHHHHHHHcCCCCcEEEEEcch-hhCCCC-CceeEEEEeCch
Confidence 369999999999988888766679999999863 3 345555443 43 345666 233332 579999998888
Q ss_pred cccChhhhhchhhhhhhh-ccCceEEE
Q 030792 76 DYLSPKYLNKTLPDLARV-ASDGVLIF 101 (171)
Q Consensus 76 dyLsprylNkTlPeLaRv-s~dgiVif 101 (171)
.++..+.+-.++-++.|+ ..+|++++
T Consensus 127 ~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 127 YMLFNERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp TTBTTTSHHHHHHHGGGGEEEEEEEES
T ss_pred hcCChHHHHHHHHHHHhhcCCCeEEEE
Confidence 888776666666666665 45666663
No 116
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.43 E-value=0.00011 Score=54.58 Aligned_cols=104 Identities=13% Similarity=0.053 Sum_probs=69.4
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHh-HhcceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv-~kG~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
.+||++|-||+.+--.+++....+..|||..+ ++-+..+++..- ..--+..+|+.-.+|....+||+||+.-. |-
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p--~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP--FR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS--SS
T ss_pred CeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC--CC
Confidence 36999999999988877766656889998764 233444443221 11135567875557777789999987544 22
Q ss_pred Chhhhhchhhhhhh---hccCceEEEecCCCcc
Q 030792 79 SPKYLNKTLPDLAR---VASDGVLIFAGYPGQQ 108 (171)
Q Consensus 79 sprylNkTlPeLaR---vs~dgiVif~g~pgq~ 108 (171)
.......+.++.+ +..+|++++...+.+.
T Consensus 134 -~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 134 -RGLLEETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp -TTTHHHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred -CCcHHHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 3455677788877 7888988887765443
No 117
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.42 E-value=0.00028 Score=52.94 Aligned_cols=89 Identities=20% Similarity=0.265 Sum_probs=57.5
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhHhcc----eeeeeecCCCCCCCC-cccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHKGI----VRVADIKFPLPYRAK-SFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~kG~----VRvadikfpLPYR~K-SFslVivSDa 74 (171)
.+||++|.|++.....|.+..+.+..|||+.+- +.+..+++ +.|+ +..+|+..++| .. .||+||++..
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~---~~~~~~v~~~~~d~~~~~~--~~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLE---RAGVKNVHVILGDGSKGFP--PKAPYDVIIVTAG 167 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHH---HTTCCSEEEEESCGGGCCG--GGCCEEEEEECSB
T ss_pred CEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHH---HcCCCCcEEEECCcccCCC--CCCCccEEEECCc
Confidence 379999999998888887654478899987642 22333332 2342 45677644444 44 4999999999
Q ss_pred ccccChhhhhchhhhhhhh-ccCceEEEec
Q 030792 75 LDYLSPKYLNKTLPDLARV-ASDGVLIFAG 103 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRv-s~dgiVif~g 103 (171)
+.++.+ ++.|+ ..+|+++++-
T Consensus 168 ~~~~~~--------~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 168 APKIPE--------PLIEQLKIGGKLIIPV 189 (235)
T ss_dssp BSSCCH--------HHHHTEEEEEEEEEEE
T ss_pred HHHHHH--------HHHHhcCCCcEEEEEE
Confidence 988764 44444 4456555443
No 118
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.42 E-value=0.00015 Score=58.64 Aligned_cols=131 Identities=11% Similarity=0.132 Sum_probs=83.1
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhHhc-ceeeeeecCCCCCCCCcccEEEEcccccccC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDYLS 79 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~kG-~VRvadikfpLPYR~KSFslVivSDaLdyLs 79 (171)
.+||+||.|++.....|++.- +....|++.-++- ..++.+ .+ -+..+|+.-|+| . ||+|+.+++|.+++
T Consensus 211 ~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~---~~a~~~--~~v~~~~~d~~~~~~--~--~D~v~~~~~lh~~~ 281 (372)
T 1fp1_D 211 STLVDVGGGSGRNLELIISKYPLIKGINFDLPQVI---ENAPPL--SGIEHVGGDMFASVP--Q--GDAMILKAVCHNWS 281 (372)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHH---TTCCCC--TTEEEEECCTTTCCC--C--EEEEEEESSGGGSC
T ss_pred CEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHH---Hhhhhc--CCCEEEeCCcccCCC--C--CCEEEEecccccCC
Confidence 479999999999999988654 3445555641111 111111 22 234567744555 2 99999999999999
Q ss_pred hhhhhchhhhhhhhcc-CceEEEec--CCCcch-------hhhhhhhhc-CCCccccchhHHHHHHHHhcccc
Q 030792 80 PKYLNKTLPDLARVAS-DGVLIFAG--YPGQQR-------AKVAELSKF-GRPAKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 80 prylNkTlPeLaRvs~-dgiVif~g--~pgq~~-------ak~~elskf-gr~ak~RsssWW~r~F~q~~lee 141 (171)
....-+.|-++.|+-+ +|.++++- .|.... ....++.-+ ....+.|+..-|.+.|.++|++.
T Consensus 282 d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 354 (372)
T 1fp1_D 282 DEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSK 354 (372)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCce
Confidence 9888899999999855 56666552 333221 122222111 01135678888999999999864
No 119
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.41 E-value=0.00039 Score=49.47 Aligned_cols=81 Identities=21% Similarity=0.297 Sum_probs=58.0
Q ss_pred cceeeeeecCCCCC---CCCcccEEEEcccccccChhhhhchhhhhhhhcc-CceEEEecCCCcchhhhhhhhhcCCCcc
Q 030792 48 GIVRVADIKFPLPY---RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAK 123 (171)
Q Consensus 48 G~VRvadikfpLPY---R~KSFslVivSDaLdyLsprylNkTlPeLaRvs~-dgiVif~g~pgq~~ak~~elskfgr~ak 123 (171)
--+.++|+. .+|+ ...+||+|+++.+|.|+.+ .+.+.|.++.|+-+ +|.+++. .|... ..+.+.-
T Consensus 44 ~~~~~~d~~-~~~~~~~~~~~fD~V~~~~~l~~~~~-~~~~~l~~~~r~LkpgG~l~~~-~~~~~--------~~~~~~~ 112 (176)
T 2ld4_A 44 GRVSVENIK-QLLQSAHKESSFDIILSGLVPGSTTL-HSAEILAEIARILRPGGCLFLK-EPVET--------AVDNNSK 112 (176)
T ss_dssp SEEEEEEGG-GGGGGCCCSSCEEEEEECCSTTCCCC-CCHHHHHHHHHHEEEEEEEEEE-EEEES--------SSCSSSS
T ss_pred cEEEEechh-cCccccCCCCCEeEEEECChhhhccc-CHHHHHHHHHHHCCCCEEEEEE-ccccc--------ccccccc
Confidence 356788884 5666 7899999999999999933 35789999999865 5666663 23111 1122344
Q ss_pred ccchhHHHHHHHHhcc
Q 030792 124 MRSSSWWIRYFVQTSL 139 (171)
Q Consensus 124 ~RsssWW~r~F~q~~l 139 (171)
.++..-|.+.+.++|+
T Consensus 113 ~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 113 VKTASKLCSALTLSGL 128 (176)
T ss_dssp SCCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHCCC
Confidence 5677889999999998
No 120
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.41 E-value=0.0001 Score=55.39 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=62.1
Q ss_pred cceeecCCchhHhHhhhhc-ccccccccccccc--cchhHHHHHHhHhcceeeeeecCC---CCCCCCcccEEEEccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFP---LPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke-e~teAWGVEPyd~--~d~d~~CksLv~kG~VRvadikfp---LPYR~KSFslVivSDaLd 76 (171)
+||++|.||+.+...|.+. ...+..|||..+- +.+..+++.. ..=.+..+|+.-| +|.. .+||+|+ .|
T Consensus 77 ~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~-~~--- 150 (230)
T 1fbn_A 77 KILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKVDVIY-ED--- 150 (230)
T ss_dssp EEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEE-EC---
T ss_pred EEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccEEEEE-Ee---
Confidence 6999999999998888866 3478999998763 4444454433 1112345777543 4554 7899999 23
Q ss_pred ccChhhhhchhhhhhhh-ccCceEEEe
Q 030792 77 YLSPKYLNKTLPDLARV-ASDGVLIFA 102 (171)
Q Consensus 77 yLsprylNkTlPeLaRv-s~dgiVif~ 102 (171)
.-.|......+.++.|+ ..+|.++++
T Consensus 151 ~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 151 VAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 34455556668888865 456676665
No 121
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.40 E-value=0.00023 Score=52.14 Aligned_cols=98 Identities=16% Similarity=0.114 Sum_probs=58.8
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccc--cchhHHHHH-HhHhc----ceeeeeecCCCCCCCCcccEEEEcc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI--EDADARCKS-LVHKG----IVRVADIKFPLPYRAKSFPLVIVSD 73 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~--~d~d~~Cks-Lv~kG----~VRvadikfpLPYR~KSFslVivSD 73 (171)
.+||++|-|++.....|.+.. +.+..|||+++- +.+-+..+. .-+.| .+.++|+ ..+|+...+ |.|++.=
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~-~~l~~~~~~-d~v~~~~ 106 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATA-ERLPPLSGV-GELHVLM 106 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCS-TTCCSCCCE-EEEEEES
T ss_pred CEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecch-hhCCCCCCC-CEEEEEc
Confidence 369999999999998888654 688999998763 211111211 11234 3567888 558887666 7665211
Q ss_pred cccccChhhh---hchhhhhhhhccC-ceEEE
Q 030792 74 ALDYLSPKYL---NKTLPDLARVASD-GVLIF 101 (171)
Q Consensus 74 aLdyLspryl---NkTlPeLaRvs~d-giVif 101 (171)
....+...++ .+.|.++.|+-+. |.+++
T Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 138 (218)
T 3mq2_A 107 PWGSLLRGVLGSSPEMLRGMAAVCRPGASFLV 138 (218)
T ss_dssp CCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEE
T ss_pred cchhhhhhhhccHHHHHHHHHHHcCCCcEEEE
Confidence 0000000111 6778889887654 55554
No 122
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=97.36 E-value=0.0002 Score=57.79 Aligned_cols=102 Identities=14% Similarity=0.154 Sum_probs=68.9
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhHhc-------ceeeeeec-------CCCCCCCCc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHKG-------IVRVADIK-------FPLPYRAKS 65 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~kG-------~VRvadik-------fpLPYR~KS 65 (171)
.+||++|-||+....++++....+..||++++- +.|...+...-... -.+++|+. .+-|+...+
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~ 129 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGK 129 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSC
T ss_pred CeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCC
Confidence 369999999998888888777778999998863 33333333321000 13466661 122455679
Q ss_pred ccEEEEccccccc-ChhhhhchhhhhhhhccC-ceEEEec
Q 030792 66 FPLVIVSDALDYL-SPKYLNKTLPDLARVASD-GVLIFAG 103 (171)
Q Consensus 66 FslVivSDaLdyL-sprylNkTlPeLaRvs~d-giVif~g 103 (171)
||+|+...+|-|+ .+....+.|-+++|+-+. |++|++-
T Consensus 130 FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 130 FNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp EEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 9999999999886 445568999999997665 5555443
No 123
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.35 E-value=0.00022 Score=52.96 Aligned_cols=102 Identities=10% Similarity=0.051 Sum_probs=66.9
Q ss_pred cceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHh---HhcceeeeeecCCCCC-CCCc-ccEEEEcccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV---HKGIVRVADIKFPLPY-RAKS-FPLVIVSDAL 75 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv---~kG~VRvadikfpLPY-R~KS-FslVivSDaL 75 (171)
+||++|-||+.+...+++....+..|||.++ ++-+..+++..- ..--+..+|+.-.+|. ...+ ||+|+....
T Consensus 56 ~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~- 134 (201)
T 2ift_A 56 ECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPP- 134 (201)
T ss_dssp EEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCC-
T ss_pred eEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCC-
Confidence 6999999999988777766656899999874 333444444321 1123455776433443 3678 999987555
Q ss_pred cccChhhhhchhhhhhh---hccCceEEEecCCCc
Q 030792 76 DYLSPKYLNKTLPDLAR---VASDGVLIFAGYPGQ 107 (171)
Q Consensus 76 dyLsprylNkTlPeLaR---vs~dgiVif~g~pgq 107 (171)
|- .......+.++.+ +..+|+++++..+..
T Consensus 135 -~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 135 -FH-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp -SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred -CC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 22 3455677788854 677888888776654
No 124
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.33 E-value=9e-05 Score=52.62 Aligned_cols=109 Identities=14% Similarity=0.054 Sum_probs=55.5
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccc--cchhHHHHHHhHhcceeeeeecCCCCCCC-----CcccEEEE--
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFPLPYRA-----KSFPLVIV-- 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~--~d~d~~CksLv~kG~VRvadikfpLPYR~-----KSFslViv-- 71 (171)
.+||++|.||+.+...|.+.. +.+..|||..+- +-+..++...-.+-.+.++|+.- |... .+||+|++
T Consensus 32 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~fD~i~~np 109 (215)
T 4dzr_A 32 TRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE--WLIERAERGRPWHAIVSNP 109 (215)
T ss_dssp EEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH--HHHHHHHTTCCBSEEEECC
T ss_pred CEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh--hhhhhhhccCcccEEEECC
Confidence 379999999999988888664 458899987653 33444443321122355677744 4444 89999998
Q ss_pred ----cccccccChhhh------------------hchhhhhhhh-ccCceEEEecCCCcchhhh
Q 030792 72 ----SDALDYLSPKYL------------------NKTLPDLARV-ASDGVLIFAGYPGQQRAKV 112 (171)
Q Consensus 72 ----SDaLdyLspryl------------------NkTlPeLaRv-s~dgiVif~g~pgq~~ak~ 112 (171)
++.+.++.+... .+.+.++.|+ ..+|++++...|-.+...+
T Consensus 110 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 173 (215)
T 4dzr_A 110 PYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEV 173 (215)
T ss_dssp CCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHH
T ss_pred CCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHH
Confidence 344445544332 4556667665 4566645555554443333
No 125
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.31 E-value=8.7e-05 Score=57.98 Aligned_cols=127 Identities=15% Similarity=0.116 Sum_probs=70.1
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhHhcceee-----eeecCCCCCCCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHKGIVRV-----ADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~kG~VRv-----adikfpLPYR~KSFslVivSDa 74 (171)
.+|||+|.||+.....|++....+..||++++- +-+-++.......+...+ +|+..+ ++...+||+|+.+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~D~v~~~-- 115 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQG-RPSFTSIDVSFIS-- 115 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSC-CCSEEEECCSSSC--
T ss_pred CEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcC-CCCEEEEEEEhhh--
Confidence 379999999999998998775469999998752 211221111100011111 333222 2345567766554
Q ss_pred ccccChhhhhchhhhhhhhcc-CceEEEecCCCcchhhhhhhhhcCCC----ccccchhHHHHHHHHhccc
Q 030792 75 LDYLSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRP----AKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRvs~-dgiVif~g~pgq~~ak~~elskfgr~----ak~RsssWW~r~F~q~~le 140 (171)
+.+.|+++.|+-+ +|.+++.-.|..+ +--..+.|.|.. ....+..-|.+++.++|++
T Consensus 116 --------l~~~l~~i~rvLkpgG~lv~~~~p~~e-~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~ 177 (232)
T 3opn_A 116 --------LDLILPPLYEILEKNGEVAALIKPQFE-AGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFS 177 (232)
T ss_dssp --------GGGTHHHHHHHSCTTCEEEEEECHHHH-SCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEE
T ss_pred --------HHHHHHHHHHhccCCCEEEEEECcccc-cCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCE
Confidence 3789999999865 5666665433322 222344444431 1112444566777777764
No 126
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.30 E-value=0.00023 Score=57.50 Aligned_cols=99 Identities=17% Similarity=0.150 Sum_probs=69.0
Q ss_pred ccceeecCCchhHhHhhhhccc-cccccccccc--ccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccc-
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY- 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~-teAWGVEPyd--~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdy- 77 (171)
.+||++|.|++.+...|.+... .+..|||.+. ++-+..++...--...+..+|+ ++.+ ..+||+|+....+.+
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~-~~~~--~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNV-FSEV--KGRFDMIISNPPFHDG 274 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECST-TTTC--CSCEEEEEECCCCCSS
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccc-cccc--cCCeeEEEECCCcccC
Confidence 3799999999999888886643 4888998765 3334444443222234567777 4444 789999999988766
Q ss_pred --cChhhhhchhhhhhhhc-cCceEEEec
Q 030792 78 --LSPKYLNKTLPDLARVA-SDGVLIFAG 103 (171)
Q Consensus 78 --LsprylNkTlPeLaRvs-~dgiVif~g 103 (171)
.......+.+-++.|+- .+|.++++.
T Consensus 275 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 34556677888888864 567777765
No 127
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.30 E-value=9.9e-05 Score=52.22 Aligned_cols=102 Identities=11% Similarity=0.048 Sum_probs=64.2
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHh--HhcceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv--~kG~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|.|++.....|.+....+..|||+.+ ++.+..+++..- .+--+..+|+.-.+|.-..+||+|++.....
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~- 111 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYA- 111 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSH-
T ss_pred CeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCC-
Confidence 37999999999998888877557899999865 222333333221 1123556777544666567899998764431
Q ss_pred cChhhhhchhhhhh--h-hccCceEEEecCCC
Q 030792 78 LSPKYLNKTLPDLA--R-VASDGVLIFAGYPG 106 (171)
Q Consensus 78 LsprylNkTlPeLa--R-vs~dgiVif~g~pg 106 (171)
.......+..+. | +..+|++++.-.+.
T Consensus 112 --~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 112 --KETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp --HHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred --cchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 233445555564 4 46677777765443
No 128
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.29 E-value=0.00034 Score=58.88 Aligned_cols=102 Identities=15% Similarity=0.123 Sum_probs=71.8
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccc---
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY--- 77 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdy--- 77 (171)
+||++|-|++.+...|.+. +.+..|||..+. +.+..+++..--..-+..+|+ +.++....+||+||+...+.+
T Consensus 236 ~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~-~~~~~~~~~fD~Ii~npp~~~~~~ 313 (381)
T 3dmg_A 236 QVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDV-DEALTEEARFDIIVTNPPFHVGGA 313 (381)
T ss_dssp EEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECST-TTTSCTTCCEEEEEECCCCCTTCS
T ss_pred EEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcch-hhccccCCCeEEEEECCchhhccc
Confidence 7999999999998888865 678999987643 334444443222245677888 556666789999998877766
Q ss_pred cChhhhhchhhhhhhh-ccCceEEEecCCC
Q 030792 78 LSPKYLNKTLPDLARV-ASDGVLIFAGYPG 106 (171)
Q Consensus 78 LsprylNkTlPeLaRv-s~dgiVif~g~pg 106 (171)
.....+...+.++.|+ ..+|+++++..+.
T Consensus 314 ~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 314 VILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp SCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred ccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 4456666777777775 5677777776553
No 129
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.28 E-value=0.00084 Score=54.82 Aligned_cols=133 Identities=14% Similarity=0.087 Sum_probs=86.1
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccCh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 80 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLsp 80 (171)
.+||+||-||+.....|++.- +...-|++.-++.+ .++.. ..=-+..+|+--|+| .. |+|+.+.+|.++++
T Consensus 205 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~---~a~~~-~~v~~~~~d~~~~~p---~~-D~v~~~~vlh~~~~ 276 (368)
T 3reo_A 205 TTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQ---DAPAF-SGVEHLGGDMFDGVP---KG-DAIFIKWICHDWSD 276 (368)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHT---TCCCC-TTEEEEECCTTTCCC---CC-SEEEEESCGGGBCH
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHH---hhhhc-CCCEEEecCCCCCCC---CC-CEEEEechhhcCCH
Confidence 479999999999999998653 34556665422211 11110 111234578754666 23 99999999999999
Q ss_pred hhhhchhhhhhhhcc-CceEEEec--CCCcch-------hhhhhhhhcC--CCccccchhHHHHHHHHhccccc
Q 030792 81 KYLNKTLPDLARVAS-DGVLIFAG--YPGQQR-------AKVAELSKFG--RPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 81 rylNkTlPeLaRvs~-dgiVif~g--~pgq~~-------ak~~elskfg--r~ak~RsssWW~r~F~q~~leeN 142 (171)
...-+.|-++.|+-+ +|.+++.- .|.... ....++.-+. ...+.|+..-|.+.|.++|++.-
T Consensus 277 ~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v 350 (368)
T 3reo_A 277 EHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGF 350 (368)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeee
Confidence 988899999998754 56565543 333211 1223333222 24567889999999999998753
No 130
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.25 E-value=0.00089 Score=48.42 Aligned_cols=87 Identities=15% Similarity=0.016 Sum_probs=54.8
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-hc---ceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KG---IVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-kG---~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|.|++.+...|.+....+..|||..+- +-..++.-.+ .| -+..+|+ ..+| .+||+||+.-....
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~--~~~~a~~~~~~~~~~~~~~~~d~-~~~~---~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAKEVICVEVDKE--AVDVLIENLGEFKGKFKVFIGDV-SEFN---SRVDIVIMNPPFGS 124 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEEESCHH--HHHHHHHHTGGGTTSEEEEESCG-GGCC---CCCSEEEECCCCSS
T ss_pred CEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHH--HHHHHHHHHHHcCCCEEEEECch-HHcC---CCCCEEEEcCCCcc
Confidence 369999999999888888665557899987642 2222332222 23 3556777 3455 48999997655444
Q ss_pred cChhhhhchhhhhhhhc
Q 030792 78 LSPKYLNKTLPDLARVA 94 (171)
Q Consensus 78 LsprylNkTlPeLaRvs 94 (171)
.+..-..+.+.++.|+.
T Consensus 125 ~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 125 QRKHADRPFLLKAFEIS 141 (207)
T ss_dssp SSTTTTHHHHHHHHHHC
T ss_pred ccCCchHHHHHHHHHhc
Confidence 44333334566677776
No 131
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.23 E-value=0.00081 Score=54.23 Aligned_cols=95 Identities=18% Similarity=0.165 Sum_probs=60.9
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-hcc-----eeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI-----VRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-kG~-----VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.||+.+...+.+....+..|||+.++- ..++..++ .|+ +..+|+ ..+|....+||+||+.-..
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~---~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSII---EMAKELVELNGFSDKITLLRGKL-EDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHH---HHHHHHHHHTTCTTTEEEEESCT-TTSCCSSSCEEEEEECCCB
T ss_pred CEEEEecCccHHHHHHHHHCCCCEEEEEChHHHH---HHHHHHHHHcCCCCCEEEEECch-hhccCCCCcccEEEEeCch
Confidence 3699999999988777776655689999998542 23444443 332 445676 4456556899999875443
Q ss_pred cccC-hhhhhchhhhhhhhc-cCceEE
Q 030792 76 DYLS-PKYLNKTLPDLARVA-SDGVLI 100 (171)
Q Consensus 76 dyLs-prylNkTlPeLaRvs-~dgiVi 100 (171)
.++. ...+...+-++.|+- .+|++|
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 3332 233455666666654 456665
No 132
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.22 E-value=0.00087 Score=54.62 Aligned_cols=95 Identities=16% Similarity=0.148 Sum_probs=63.2
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-hc-----ceeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KG-----IVRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-kG-----~VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.||+.+...+.+....+..|||+.++- ..|+..++ .| -+..+|+ ..+|+...+||+||+....
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~---~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEIL---YQAMDIIRLNKLEDTITLIKGKI-EEVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHH---HHHHHHHHHTTCTTTEEEEESCT-TTSCCSCSCEEEEEECCCB
T ss_pred CEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHH---HHHHHHHHHcCCCCcEEEEEeeH-HHhcCCCCcEEEEEEcCch
Confidence 3699999999988877776655689999998642 33444433 23 2456777 4567777899999976532
Q ss_pred ccc-Chhhhhchhhhhhhhcc-CceEE
Q 030792 76 DYL-SPKYLNKTLPDLARVAS-DGVLI 100 (171)
Q Consensus 76 dyL-sprylNkTlPeLaRvs~-dgiVi 100 (171)
-++ ....+...|-++.|+-+ +|++|
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 222 23345667777777654 56665
No 133
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.20 E-value=0.00077 Score=48.57 Aligned_cols=106 Identities=14% Similarity=0.077 Sum_probs=63.8
Q ss_pred ccceeecCCchhHhHhhhhc-cccccccccccc--ccchhHHHHHHhHhc-ceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e~teAWGVEPyd--~~d~d~~CksLv~kG-~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|.|++.+...|.+. .+.+..|||+.+ ++-+..+++.+--.. -+..+|+. .+| ...+||+|++ +.++
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~-~~~~~D~i~~-~~~~- 142 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVE-EFP-SEPPFDGVIS-RAFA- 142 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTT-TSC-CCSCEEEEEC-SCSS-
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchh-hCC-ccCCcCEEEE-eccC-
Confidence 36999999999998888865 367899999765 222333333221111 23456663 333 3578999985 4332
Q ss_pred cChhhhhchhhhhhhh-ccCceEEEecCCCcchhhhhhhh
Q 030792 78 LSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQRAKVAELS 116 (171)
Q Consensus 78 LsprylNkTlPeLaRv-s~dgiVif~g~pgq~~ak~~els 116 (171)
.+.+.+.++.|+ ..+|.+++.-.+.|. ..+.++.
T Consensus 143 ----~~~~~l~~~~~~L~~gG~l~~~~~~~~~-~~~~~~~ 177 (207)
T 1jsx_A 143 ----SLNDMVSWCHHLPGEQGRFYALKGQMPE-DEIALLP 177 (207)
T ss_dssp ----SHHHHHHHHTTSEEEEEEEEEEESSCCH-HHHHTSC
T ss_pred ----CHHHHHHHHHHhcCCCcEEEEEeCCCch-HHHHHHh
Confidence 235667777765 456676666444443 4555553
No 134
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.19 E-value=0.00018 Score=56.98 Aligned_cols=101 Identities=21% Similarity=0.237 Sum_probs=60.4
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHh--c-------------ceeeeeecCCCCCCCCcc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK--G-------------IVRVADIKFPLPYRAKSF 66 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~k--G-------------~VRvadikfpLPYR~KSF 66 (171)
.+||++|.|++.+...+++....+..|||..+.- -..|+.-.+. | -+.++|..--++- ..+|
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~--i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 77 KRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDV--IMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHH--HHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHH--HHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 4799999999999999998745678888876422 2233322211 2 2445665322333 6789
Q ss_pred cEEEEcccccccCh-hhh--hchhhhhhhh-ccCceEEEe-cCCC
Q 030792 67 PLVIVSDALDYLSP-KYL--NKTLPDLARV-ASDGVLIFA-GYPG 106 (171)
Q Consensus 67 slVivSDaLdyLsp-ryl--NkTlPeLaRv-s~dgiVif~-g~pg 106 (171)
|+||+ |..+...| ..| ...+.++.|+ ..+|++++. +.|-
T Consensus 154 D~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~ 197 (281)
T 1mjf_A 154 DVIIA-DSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVY 197 (281)
T ss_dssp EEEEE-ECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred eEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 99986 77665433 222 3445565555 557777764 5553
No 135
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.19 E-value=0.00044 Score=53.51 Aligned_cols=96 Identities=17% Similarity=0.084 Sum_probs=60.7
Q ss_pred ccceeecCCchhHhHhhhhc--cccccccccccc--ccchhHHHHHH--hHhcceeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSL--VHKGIVRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke--e~teAWGVEPyd--~~d~d~~CksL--v~kG~VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.|++.....|.+. .+.+..|||+.+ ++.+..+++.. ...=-+..+|+.- |....+||+||+ |.-
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~--~~~~~~fD~Vi~-~~~ 188 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD--FISDQMYDAVIA-DIP 188 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT--CCCSCCEEEEEE-CCS
T ss_pred CEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc--cCcCCCccEEEE-cCc
Confidence 37999999999988888865 367889998765 22233333221 0111244567644 445679999997 321
Q ss_pred cccChhhhhchhhhhhhh-ccCceEEEecCCC
Q 030792 76 DYLSPKYLNKTLPDLARV-ASDGVLIFAGYPG 106 (171)
Q Consensus 76 dyLsprylNkTlPeLaRv-s~dgiVif~g~pg 106 (171)
...+.|.++.|+ ..+|+++++..+.
T Consensus 189 ------~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 189 ------DPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp ------CGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred ------CHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 235778888884 5567777766443
No 136
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.16 E-value=0.00054 Score=51.95 Aligned_cols=93 Identities=19% Similarity=0.206 Sum_probs=59.9
Q ss_pred cceeecCCchhHhHhhhhc--cccccccccccc--ccchhHHHHHH----hHhcceeeeeecCCCCCCCCcccEEEEccc
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSL----VHKGIVRVADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd--~~d~d~~CksL----v~kG~VRvadikfpLPYR~KSFslVivSDa 74 (171)
+||++|.|++.....|++. ......|||..+ ++.+..+++.. ...-.+..+|+ ..+|+...+||+||. |.
T Consensus 102 ~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~-~~~~~~~~~~D~v~~-~~ 179 (280)
T 1i9g_A 102 RVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL-ADSELPDGSVDRAVL-DM 179 (280)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG-GGCCCCTTCEEEEEE-ES
T ss_pred EEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch-HhcCCCCCceeEEEE-CC
Confidence 6999999999998888864 367889998754 23333343332 11123455777 445666789999997 32
Q ss_pred ccccChhhhhchhhhhhhhcc-CceEEEec
Q 030792 75 LDYLSPKYLNKTLPDLARVAS-DGVLIFAG 103 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRvs~-dgiVif~g 103 (171)
. .....+.++.|+-+ +|.+++..
T Consensus 180 ~------~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 180 L------APWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp S------CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred c------CHHHHHHHHHHhCCCCCEEEEEe
Confidence 2 23367888888644 55555544
No 137
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.15 E-value=0.00039 Score=51.61 Aligned_cols=95 Identities=14% Similarity=0.060 Sum_probs=63.3
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHh--HhcceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv--~kG~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|.|++.....|.+. +.+..|||..+- +-+..+++..- .+--+..+|+ ..+| ...+||+|++...+.+
T Consensus 80 ~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~-~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDF-LLLA-SFLKADVVFLSPPWGG 156 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH-HHHG-GGCCCSEEEECCCCSS
T ss_pred CEEEECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECCh-HHhc-ccCCCCEEEECCCcCC
Confidence 36999999999998888865 588999998752 33344443321 1223567887 3444 5679999998877766
Q ss_pred cChhhhhchhhhhhhh-ccCceEEE
Q 030792 78 LSPKYLNKTLPDLARV-ASDGVLIF 101 (171)
Q Consensus 78 LsprylNkTlPeLaRv-s~dgiVif 101 (171)
+ .+....+.++.|+ ..+|++|+
T Consensus 157 ~--~~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 157 P--DYATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp G--GGGGSSSBCTTTSCSSCHHHHH
T ss_pred c--chhhhHHHHHHhhcCCcceeHH
Confidence 4 4455678888876 44555443
No 138
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.14 E-value=0.00083 Score=55.45 Aligned_cols=95 Identities=16% Similarity=0.250 Sum_probs=63.3
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHh-c-----ceeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G-----IVRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~k-G-----~VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.||+.....|.+....+..|||++++- ..|+..+++ | -+..+|+ ..+++. .+||+||+ +.+
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~---~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~-~~~D~Iv~-~~~ 138 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGARKVYAVEATKMA---DHARALVKANNLDHIVEVIEGSV-EDISLP-EKVDVIIS-EWM 138 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTH---HHHHHHHHHTTCTTTEEEEESCG-GGCCCS-SCEEEEEE-CCC
T ss_pred CEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHH---HHHHHHHHHcCCCCeEEEEECch-hhcCcC-CcceEEEE-cCh
Confidence 4799999999988888887655699999998443 344554443 2 3456777 444443 88999987 554
Q ss_pred cc-cCh-hhhhchhhhhhhh-ccCceEEEe
Q 030792 76 DY-LSP-KYLNKTLPDLARV-ASDGVLIFA 102 (171)
Q Consensus 76 dy-Lsp-rylNkTlPeLaRv-s~dgiVif~ 102 (171)
.| +.+ ..+...+.++.|+ ..+|++|+.
T Consensus 139 ~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 139 GYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp BTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 44 433 4567777777664 455666554
No 139
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.13 E-value=0.00066 Score=55.13 Aligned_cols=99 Identities=15% Similarity=0.193 Sum_probs=57.6
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhH----------hcceeeeeecCCCCCCCCcccEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH----------KGIVRVADIKFPLPYRAKSFPLVI 70 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~----------kG~VRvadikfpLPYR~KSFslVi 70 (171)
++||++|.|++++...|++.. ..+..|||..+. +-..|+.-.. +=-+.++|..-.++....+||+||
T Consensus 85 ~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~--vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 85 KHVLIIGGGDGAMLREVTRHKNVESITMVEIDAG--VVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTT--HHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHH--HHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 479999999999999999864 456788887653 2223333221 224667887555666678999988
Q ss_pred EcccccccChh-hh--hchhhhhhhh-ccCceEEEec
Q 030792 71 VSDALDYLSPK-YL--NKTLPDLARV-ASDGVLIFAG 103 (171)
Q Consensus 71 vSDaLdyLspr-yl--NkTlPeLaRv-s~dgiVif~g 103 (171)
+ |.-|...|. .| ...+-++.|+ ..+|++++..
T Consensus 163 ~-D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 163 S-DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp E-CC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred E-CCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 7 665544332 11 3344455554 5677766643
No 140
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.11 E-value=0.0018 Score=48.41 Aligned_cols=94 Identities=13% Similarity=-0.011 Sum_probs=60.8
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhHh--cceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~k--G~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
+||++|.|++.+...|.+. +.+.+|||+.+- +-+..+++.+=-. =-+..+|+.-.+|.. .+||+|+....+
T Consensus 58 ~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~~--- 132 (204)
T 3njr_A 58 LLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPEAVFIGGGG--- 132 (204)
T ss_dssp EEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCSEEEECSCC---
T ss_pred EEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCCEEEECCcc---
Confidence 6999999998887777766 888999998652 2233343332111 124556774434443 579999977654
Q ss_pred Chhhhhchhhhhhhh-ccCceEEEecCC
Q 030792 79 SPKYLNKTLPDLARV-ASDGVLIFAGYP 105 (171)
Q Consensus 79 sprylNkTlPeLaRv-s~dgiVif~g~p 105 (171)
. .. .+.++.|+ ...|.+++....
T Consensus 133 ~---~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 133 S---QA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp C---HH-HHHHHHHHSCTTCEEEEEECS
T ss_pred c---HH-HHHHHHHhcCCCcEEEEEecC
Confidence 2 22 67777775 567788777643
No 141
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.09 E-value=0.0011 Score=49.52 Aligned_cols=93 Identities=14% Similarity=0.091 Sum_probs=60.3
Q ss_pred ccceeecCCchhHhHhhhhc-c-ccccccccccc--ccchhHHHHHHhHhc--ceeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e-~teAWGVEPyd--~~d~d~~CksLv~kG--~VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.|++.....|.+. . ..+..|+|..+ ++.+..+++..--.+ -+..+|+.- ++...+||+|+. |
T Consensus 95 ~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~~D~v~~-~-- 169 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE--GIEEENVDHVIL-D-- 169 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG--CCCCCSEEEEEE-C--
T ss_pred CEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh--ccCCCCcCEEEE-C--
Confidence 36999999999988888865 2 67889998864 233444444332122 345567753 355778999986 3
Q ss_pred cccChhhhhchhhhhhhhc-cCceEEEec
Q 030792 76 DYLSPKYLNKTLPDLARVA-SDGVLIFAG 103 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs-~dgiVif~g 103 (171)
+......+.++.|+- .+|.+++..
T Consensus 170 ----~~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 170 ----LPQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp ----SSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ----CCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 223356788888864 456666554
No 142
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.08 E-value=0.0019 Score=49.86 Aligned_cols=99 Identities=15% Similarity=0.253 Sum_probs=61.8
Q ss_pred ccceeecCCchhHhHhhhhc-cccccccccccc--ccchhHHHHHHh-HhcceeeeeecCCCCCCCCcccEEEEc-----
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVS----- 72 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e~teAWGVEPyd--~~d~d~~CksLv-~kG~VRvadikfpLPYR~KSFslVivS----- 72 (171)
.+||++|.|++.+...|.++ .+.+..|||.++ ++-+..+++.+- ..--+..+|+.-++| ..+||+|++.
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npPy~~ 188 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPPYID 188 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCCCBC
T ss_pred CEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCCCCC
Confidence 36999999999998888855 356899998765 233444544331 112244567754444 6789999985
Q ss_pred --------ccccccCh----------hhhhchhhhhhhhc-cCceEEEe
Q 030792 73 --------DALDYLSP----------KYLNKTLPDLARVA-SDGVLIFA 102 (171)
Q Consensus 73 --------DaLdyLsp----------rylNkTlPeLaRvs-~dgiVif~ 102 (171)
++++|-.. ..+.+.+.++.|+- .+|++++.
T Consensus 189 ~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 189 EQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp TTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 34444321 23455666666654 56676665
No 143
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.06 E-value=0.0011 Score=47.55 Aligned_cols=97 Identities=13% Similarity=0.151 Sum_probs=61.3
Q ss_pred ccceeecCCchhHhHhhhhcc---cccccccccccccchhHHHHHHhHhcceeeeeecCCCC------------------
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE---ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLP------------------ 60 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee---~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLP------------------ 60 (171)
.+|||+|.|++.+...|.+.- +.+..|||++++... ..=.+..+|+ ..++
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~--------~~v~~~~~d~-~~~~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPI--------PNVYFIQGEI-GKDNMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCC--------TTCEEEECCT-TTTSSCCC-----------CHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCC--------CCceEEEccc-cchhhhhhccccccccccchhh
Confidence 369999999999888887653 478999999986421 1112445677 3333
Q ss_pred -------CCCCcccEEEEcccccccChhh---------hhchhhhhhhh-ccCceEEEecCCCc
Q 030792 61 -------YRAKSFPLVIVSDALDYLSPKY---------LNKTLPDLARV-ASDGVLIFAGYPGQ 107 (171)
Q Consensus 61 -------YR~KSFslVivSDaLdyLspry---------lNkTlPeLaRv-s~dgiVif~g~pgq 107 (171)
+...+||+|++.-++.+..... +.+.+.++.|+ ...|.+++.-+.+.
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 158 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS 158 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC
Confidence 4567999999754555432111 12356677776 55677776554443
No 144
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.05 E-value=0.00019 Score=49.51 Aligned_cols=102 Identities=15% Similarity=0.059 Sum_probs=62.5
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhHhcceeeeeecCCCCCC---CCcccEEEEccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFPLPYR---AKSFPLVIVSDALD 76 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~kG~VRvadikfpLPYR---~KSFslVivSDaLd 76 (171)
.+||++|.|++.....|.+.. ....|||..+- +-+..+++..--+--+..+|+.-.+|.- ..+||+|++.....
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~ 121 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEG-WEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA 121 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTT-CEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT
T ss_pred CeEEEeCCCcCHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCCc
Confidence 369999999999988888654 44899987642 2233333321002345567764434432 23899999876543
Q ss_pred ccChhhhhchhhhhh--h-hccCceEEEecCCCcc
Q 030792 77 YLSPKYLNKTLPDLA--R-VASDGVLIFAGYPGQQ 108 (171)
Q Consensus 77 yLsprylNkTlPeLa--R-vs~dgiVif~g~pgq~ 108 (171)
......+..+. | +..+|+++++..+.+.
T Consensus 122 ----~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 122 ----MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp ----SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred ----hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 33445666665 5 4567887777655443
No 145
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.04 E-value=0.0037 Score=46.01 Aligned_cols=92 Identities=14% Similarity=0.116 Sum_probs=57.2
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHh-Hhcc-----eeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV-HKGI-----VRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv-~kG~-----VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.|++.+...|++. ..+..|+|+.+- .-..++... +.|+ +..+|+.-++ ....+||+||..
T Consensus 93 ~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~--~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~--- 165 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEE--FYKTAQKNLKKFNLGKNVKFFNVDFKDAE-VPEGIFHAAFVD--- 165 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHH-SSEEEEECSCHH--HHHHHHHHHHHTTCCTTEEEECSCTTTSC-CCTTCBSEEEEC---
T ss_pred CEEEEeCCCccHHHHHHHHh-CCEEEEEecCHH--HHHHHHHHHHHcCCCCcEEEEEcChhhcc-cCCCcccEEEEC---
Confidence 36999999998888888876 788899987642 122233222 2232 3446664332 245789999962
Q ss_pred cccChhhhhchhhhhhhhc-cCceEEEecC
Q 030792 76 DYLSPKYLNKTLPDLARVA-SDGVLIFAGY 104 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs-~dgiVif~g~ 104 (171)
+......+.++.|+- .+|.+++...
T Consensus 166 ----~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 166 ----VREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp ----SSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred ----CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 223456677777754 4566655553
No 146
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.03 E-value=0.00063 Score=51.63 Aligned_cols=93 Identities=16% Similarity=0.120 Sum_probs=59.3
Q ss_pred cceeecCCchhHhHhhhhcc-cccccccccccc--cchhHHHHHHhHhcc-eeeeeecCC---CCCCCCcccEEEEcccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI--EDADARCKSLVHKGI-VRVADIKFP---LPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~--~d~d~~CksLv~kG~-VRvadikfp---LPYR~KSFslVivSDaL 75 (171)
+||++|-||+.....|.+.- ..+..|||+++- +.+-..++.. .++ ..++|+..+ +|.. .+||+|++. +
T Consensus 60 ~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~-~- 134 (210)
T 1nt2_A 60 RVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIV-EKVDLIYQD-I- 134 (210)
T ss_dssp EEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTC-CCEEEEEEC-C-
T ss_pred EEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccc-cceeEEEEe-c-
Confidence 69999999999877766542 468999998863 2233344432 222 235777655 4554 789999864 3
Q ss_pred cccChhhhhchhhhhhhhcc-CceEEEe
Q 030792 76 DYLSPKYLNKTLPDLARVAS-DGVLIFA 102 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~-dgiVif~ 102 (171)
..|......+.++.|+-+ .|.++++
T Consensus 135 --~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 --AQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp --CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --cChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 234444445788888755 4666655
No 147
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.03 E-value=0.00049 Score=50.66 Aligned_cols=96 Identities=15% Similarity=0.066 Sum_probs=59.5
Q ss_pred ccceeecCCchhHhHhhhhccc------cccccccccc--ccchhHHHHHHh------HhcceeeeeecCCCC---CCCC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE------TEAWGVEPYD--IEDADARCKSLV------HKGIVRVADIKFPLP---YRAK 64 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~------teAWGVEPyd--~~d~d~~CksLv------~kG~VRvadikfpLP---YR~K 64 (171)
.+||++|.|++.....|.+.-+ .+..|||+++ ++-+..+++..- ..-.+..+|+.-.+| ....
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 161 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELG 161 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCC
Confidence 3799999999888777775433 5899999865 232333333321 112245567743321 4567
Q ss_pred cccEEEEcccccccChhhhhchhhhhhhh-ccCceEEEecCC
Q 030792 65 SFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAGYP 105 (171)
Q Consensus 65 SFslVivSDaLdyLsprylNkTlPeLaRv-s~dgiVif~g~p 105 (171)
+||+|++...+.++ +.++.|+ ..+|+++++-.|
T Consensus 162 ~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 162 LFDAIHVGASASEL--------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEEE
T ss_pred CcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEcc
Confidence 89999999988764 3445554 456666655433
No 148
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=96.97 E-value=0.0017 Score=48.74 Aligned_cols=115 Identities=14% Similarity=0.208 Sum_probs=66.9
Q ss_pred cceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhHhcc----eeeeeecCCCC--CCCCcccEEEEcccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGI----VRVADIKFPLP--YRAKSFPLVIVSDAL 75 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~kG~----VRvadikfpLP--YR~KSFslVivSDaL 75 (171)
.||++|.|++.+...|.+.. +....|||.++-- ++.-.+.+-+.|+ +..+|+. .+| +...+||.|++.-..
T Consensus 41 ~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~-l~~a~~~~~~~~~~nv~~~~~d~~-~l~~~~~~~~~d~v~~~~~~ 118 (213)
T 2fca_A 41 IHIEVGTGKGQFISGMAKQNPDINYIGIELFKSV-IVTAVQKVKDSEAQNVKLLNIDAD-TLTDVFEPGEVKRVYLNFSD 118 (213)
T ss_dssp EEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHH-HHHHHHHHHHSCCSSEEEECCCGG-GHHHHCCTTSCCEEEEESCC
T ss_pred eEEEEecCCCHHHHHHHHHCCCCCEEEEEechHH-HHHHHHHHHHcCCCCEEEEeCCHH-HHHhhcCcCCcCEEEEECCC
Confidence 69999999999988887653 6788999987532 2221222223343 3446763 354 567889998764221
Q ss_pred cccChhh------hhchhhhhhhh-ccCceEEEec-CCCcchhhhhhhhhcC
Q 030792 76 DYLSPKY------LNKTLPDLARV-ASDGVLIFAG-YPGQQRAKVAELSKFG 119 (171)
Q Consensus 76 dyLspry------lNkTlPeLaRv-s~dgiVif~g-~pgq~~ak~~elskfg 119 (171)
.+...+. ....|.++.|+ ...|.+++.. .+.+...-...+.+.|
T Consensus 119 p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g 170 (213)
T 2fca_A 119 PWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYG 170 (213)
T ss_dssp CCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred CCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 2221111 13456777775 5677777765 4444433344454443
No 149
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=96.97 E-value=0.0013 Score=48.76 Aligned_cols=94 Identities=14% Similarity=0.093 Sum_probs=58.8
Q ss_pred ccceeecCCchhHhHhhhhc-c-ccccccccccc--ccchhHHHHHH-h-HhcceeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSL-V-HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e-~teAWGVEPyd--~~d~d~~CksL-v-~kG~VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|.|++.....|.+. . ..+..|+|+.+ ++-+..+++.. = ..=.+..+|+ ..+|+...+||+||. |
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~-~~~~~~~~~~D~v~~-~-- 173 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKL-EEAELEEAAYDGVAL-D-- 173 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCG-GGCCCCTTCEEEEEE-E--
T ss_pred CEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECch-hhcCCCCCCcCEEEE-C--
Confidence 37999999999888888865 2 57888988654 22233333221 0 1112455677 345677789999997 2
Q ss_pred cccChhhhhchhhhhhhhcc-CceEEEec
Q 030792 76 DYLSPKYLNKTLPDLARVAS-DGVLIFAG 103 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~-dgiVif~g 103 (171)
+......|.++.|+-+ +|.+++..
T Consensus 174 ----~~~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 174 ----LMEPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp ----SSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ----CcCHHHHHHHHHHhCCCCCEEEEEe
Confidence 2233467888888655 45555544
No 150
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=96.96 E-value=0.00053 Score=50.63 Aligned_cols=95 Identities=15% Similarity=0.135 Sum_probs=60.0
Q ss_pred cceeecCCchhHhHhhhhc--ccccccccccccc--cchhHHHHHHhHhcceeeeeecCCCCC--CCCcccEEEEccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFPLPY--RAKSFPLVIVSDALD 76 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd~--~d~d~~CksLv~kG~VRvadikfpLPY--R~KSFslVivSDaLd 76 (171)
+||++|.|++.....|.+. ......|||+.+- +.+..+++.. ..=.+..+|+.-+.++ -..+||+|+. |..
T Consensus 76 ~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~-~~~- 152 (227)
T 1g8a_A 76 SVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALVPKVDVIFE-DVA- 152 (227)
T ss_dssp EEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEEE-CCC-
T ss_pred EEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcccCCceEEEE-CCC-
Confidence 6999999999888888765 2468899987652 2344444433 1223456777543222 2358999994 443
Q ss_pred ccChhhhhchhhhhhhhcc-CceEEEe
Q 030792 77 YLSPKYLNKTLPDLARVAS-DGVLIFA 102 (171)
Q Consensus 77 yLsprylNkTlPeLaRvs~-dgiVif~ 102 (171)
.|......+.++.|+-+ +|.++++
T Consensus 153 --~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 153 --QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp --STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 45554455888887654 5666665
No 151
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.95 E-value=0.00052 Score=48.20 Aligned_cols=101 Identities=11% Similarity=0.083 Sum_probs=61.6
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHh--HhcceeeeeecCC---CCCCCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFP---LPYRAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv--~kG~VRvadikfp---LPYR~KSFslVivSDa 74 (171)
.+||++|-|++.+...+++....+..|||..+ ++.+..+++..- .+--+..+|+.-. +|....+||+|++...
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~ 125 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPP 125 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCC
Confidence 37999999999998888876557899999764 233444443321 1223556776432 2334689999987654
Q ss_pred ccccChhhhhchhhhh--hh-hccCceEEEecCC
Q 030792 75 LDYLSPKYLNKTLPDL--AR-VASDGVLIFAGYP 105 (171)
Q Consensus 75 LdyLsprylNkTlPeL--aR-vs~dgiVif~g~p 105 (171)
.. .....+.+-.+ .| +..+|++++....
T Consensus 126 ~~---~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 126 YA---KQEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp GG---GCCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CC---chhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 22 22334444454 44 4567777765533
No 152
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=96.93 E-value=0.003 Score=51.60 Aligned_cols=133 Identities=8% Similarity=0.057 Sum_probs=85.1
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccCh
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 80 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLsp 80 (171)
.+||+||-||+.....|++.- +...-|++.-++- ..++.. .+=-+..+|+--|+| . . |+|+.+.+|.++++
T Consensus 203 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~---~~a~~~-~~v~~~~~D~~~~~p--~-~-D~v~~~~vlh~~~d 274 (364)
T 3p9c_A 203 GTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVI---SEAPQF-PGVTHVGGDMFKEVP--S-G-DTILMKWILHDWSD 274 (364)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHH---TTCCCC-TTEEEEECCTTTCCC--C-C-SEEEEESCGGGSCH
T ss_pred CEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHH---Hhhhhc-CCeEEEeCCcCCCCC--C-C-CEEEehHHhccCCH
Confidence 479999999999999998653 3344555442221 111111 111234577744666 2 3 99999999999999
Q ss_pred hhhhchhhhhhhhc-cCceEEEec--CCCcch-------hhhhhhhhc--CCCccccchhHHHHHHHHhccccc
Q 030792 81 KYLNKTLPDLARVA-SDGVLIFAG--YPGQQR-------AKVAELSKF--GRPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 81 rylNkTlPeLaRvs-~dgiVif~g--~pgq~~-------ak~~elskf--gr~ak~RsssWW~r~F~q~~leeN 142 (171)
+..-+.|-++.|+- .+|.+++.- .|.... ....++.-. .-..+.|+...|.+.|.++|++.-
T Consensus 275 ~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v 348 (364)
T 3p9c_A 275 QHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGV 348 (364)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceE
Confidence 99999999999975 466665543 333211 112233222 134567899999999999998753
No 153
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=96.89 E-value=0.001 Score=51.36 Aligned_cols=94 Identities=9% Similarity=0.051 Sum_probs=62.3
Q ss_pred ccceeecCCchhHhHhhhhc-----ccccccccccccc--cchhHHHHHHhHhcceeeeeecCC--CCCCC-CcccEEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-----EETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFP--LPYRA-KSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-----e~teAWGVEPyd~--~d~d~~CksLv~kG~VRvadikfp--LPYR~-KSFslViv 71 (171)
.+||++|.||+.....|.+. .+.+..|||.++- +-+. .+-.+=.+.++|+.-. ||+-. .+||+|++
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDMENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGCTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccCCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 47999999999988877764 3688999998763 2222 2211223566888543 56544 37999887
Q ss_pred cccccccChhhhhchhhhhhh--hccCceEEEecC
Q 030792 72 SDALDYLSPKYLNKTLPDLAR--VASDGVLIFAGY 104 (171)
Q Consensus 72 SDaLdyLsprylNkTlPeLaR--vs~dgiVif~g~ 104 (171)
..+ +. ..-+.|.++.| +...|++++.-.
T Consensus 159 d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 159 DNA--HA---NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp ESS--CS---SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCc--hH---hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 544 32 33457778875 677888888643
No 154
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=96.88 E-value=0.0027 Score=48.51 Aligned_cols=107 Identities=14% Similarity=0.058 Sum_probs=62.6
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHh--cceeeeeecCCCC-CCCCcccEEEEcccc-
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLP-YRAKSFPLVIVSDAL- 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~k--G~VRvadikfpLP-YR~KSFslVivSDaL- 75 (171)
.+||++|.||+.+-..|.+....+..|||..+ ++-+..+++..--. --+..+|+.-..+ +...+||+||+.--.
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~ 130 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYF 130 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC-
T ss_pred CEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCCC
Confidence 37999999999887777766555889998764 23344444332111 2345678744333 457899999984211
Q ss_pred -----cccC------------hhhhhchhhhhhhh-ccCceEEEecCCCcc
Q 030792 76 -----DYLS------------PKYLNKTLPDLARV-ASDGVLIFAGYPGQQ 108 (171)
Q Consensus 76 -----dyLs------------prylNkTlPeLaRv-s~dgiVif~g~pgq~ 108 (171)
...+ ..-+...+.++.|+ ...|.++++-.|.+.
T Consensus 131 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 181 (259)
T 3lpm_A 131 ATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERL 181 (259)
T ss_dssp ----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTH
T ss_pred CCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHH
Confidence 1111 12344556666665 456777776544443
No 155
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=96.88 E-value=0.0017 Score=53.96 Aligned_cols=126 Identities=17% Similarity=0.219 Sum_probs=75.4
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc-ccchhHHHHHHhHhccee---eeeecC----CCCCCCCcccEEEEcc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD-IEDADARCKSLVHKGIVR---VADIKF----PLPYRAKSFPLVIVSD 73 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd-~~d~d~~CksLv~kG~VR---vadikf----pLPYR~KSFslVivSD 73 (171)
..|||+|-||+..-..|++....+..||+... |-+. ++-+...|. ..++.. .|| ..+||+|++ |
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~-----a~r~~~rv~~~~~~ni~~l~~~~l~--~~~fD~v~~-d 158 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVW-----KLRQDDRVRSMEQYNFRYAEPVDFT--EGLPSFASI-D 158 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCH-----HHHTCTTEEEECSCCGGGCCGGGCT--TCCCSEEEE-C
T ss_pred cEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHH-----HHHhCcccceecccCceecchhhCC--CCCCCEEEE-E
Confidence 36999999999999999877667899999864 2221 111111221 123311 133 246999875 5
Q ss_pred cccccChhhhhchhhhhhhhccC-ceEEEecCCCcchhhhhhhhhcCC---Cc-cccchhHHHHHHHHhccc
Q 030792 74 ALDYLSPKYLNKTLPDLARVASD-GVLIFAGYPGQQRAKVAELSKFGR---PA-KMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 74 aLdyLsprylNkTlPeLaRvs~d-giVif~g~pgq~~ak~~elskfgr---~a-k~RsssWW~r~F~q~~le 140 (171)
+. ++ .|.+.|||+.|+-+. |.++++=-|-.+ +.-.++.|.|- |. ..++...|.+++.++|++
T Consensus 159 ~s-f~---sl~~vL~e~~rvLkpGG~lv~lvkPqfe-~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~ 225 (291)
T 3hp7_A 159 VS-FI---SLNLILPALAKILVDGGQVVALVKPQFE-AGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFS 225 (291)
T ss_dssp CS-SS---CGGGTHHHHHHHSCTTCEEEEEECGGGT-SCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEE
T ss_pred ee-Hh---hHHHHHHHHHHHcCcCCEEEEEECcccc-cChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCE
Confidence 43 23 468999999998765 455554334333 33335555554 11 123556678888888764
No 156
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=96.86 E-value=0.002 Score=54.32 Aligned_cols=106 Identities=14% Similarity=0.230 Sum_probs=73.8
Q ss_pred cceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHhcc----eeeeeecCC---CCCCCCcccEEEEcc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI----VRVADIKFP---LPYRAKSFPLVIVSD 73 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~kG~----VRvadikfp---LPYR~KSFslVivSD 73 (171)
+|||+|-|++.+--.|.+. ..+..|||.++ ++.+..|++. .|+ +..+|+.-. +|+...+||+|++ |
T Consensus 289 ~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~---~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~-d 363 (433)
T 1uwv_A 289 RVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARL---NGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL-D 363 (433)
T ss_dssp EEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHH---TTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE-C
T ss_pred EEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHH---cCCCceEEEECCHHHHhhhhhhhcCCCCEEEE-C
Confidence 6999999999988888755 78899999875 4445555543 343 556777443 4577789999885 3
Q ss_pred cccccChhh-hhchhhhhhhhccCceEEEecCCCcchhhhhhhhhc
Q 030792 74 ALDYLSPKY-LNKTLPDLARVASDGVLIFAGYPGQQRAKVAELSKF 118 (171)
Q Consensus 74 aLdyLspry-lNkTlPeLaRvs~dgiVif~g~pgq~~ak~~elskf 118 (171)
.|+- +...+..|.+...++||.++-.|.....-++.|.+.
T Consensus 364 -----PPr~g~~~~~~~l~~~~p~~ivyvsc~p~tlard~~~l~~~ 404 (433)
T 1uwv_A 364 -----PARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKA 404 (433)
T ss_dssp -----CCTTCCHHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHT
T ss_pred -----CCCccHHHHHHHHHhcCCCeEEEEECChHHHHhhHHHHHHC
Confidence 2332 455677778888899988888888764444444433
No 157
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=96.84 E-value=0.0017 Score=48.98 Aligned_cols=94 Identities=11% Similarity=0.042 Sum_probs=58.8
Q ss_pred ccceeecCCchhHhHhhhh-ccccccccccccc--ccchhHHHHHHhHhc-ceeeeeecCCCCCC---CCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLK-EEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYR---AKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llk-ee~teAWGVEPyd--~~d~d~~CksLv~kG-~VRvadikfpLPYR---~KSFslVivSDa 74 (171)
.+||++|.||+.+--.|.+ ..+.+..|||+.+ ++-+..+++.+=-.. -+..+|+ ..+|.. ..+||+|++...
T Consensus 72 ~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~fD~V~~~~~ 150 (240)
T 1xdz_A 72 NTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRA-ETFGQRKDVRESYDIVTARAV 150 (240)
T ss_dssp CEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCH-HHHTTCTTTTTCEEEEEEECC
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccH-HHhcccccccCCccEEEEecc
Confidence 3699999999876666654 3467889999875 233555555431111 1445666 345543 579999997553
Q ss_pred ccccChhhhhchhhhhhhh-ccCceEEEe
Q 030792 75 LDYLSPKYLNKTLPDLARV-ASDGVLIFA 102 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRv-s~dgiVif~ 102 (171)
..+...+.++.|+ ..+|++++.
T Consensus 151 ------~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 151 ------ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp ------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred ------CCHHHHHHHHHHhcCCCCEEEEE
Confidence 2245667777665 456676665
No 158
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=96.84 E-value=0.0044 Score=50.80 Aligned_cols=96 Identities=11% Similarity=0.070 Sum_probs=61.4
Q ss_pred ccceeecCCchhHhHhhhhccc-cccccccccc--ccchhHHHHHHhHhcc----eeeeeecCCCCC-CCCcccEEEEcc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYD--IEDADARCKSLVHKGI----VRVADIKFPLPY-RAKSFPLVIVSD 73 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~-teAWGVEPyd--~~d~d~~CksLv~kG~----VRvadikfpLPY-R~KSFslVivSD 73 (171)
.+||++| |++.+...|.+... .+..|||..+ ++-+..+++. .|+ +..+|+.-+||. -..+||+||+.-
T Consensus 174 ~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~---~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 174 KDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANE---IGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp CEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHH---HTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH---cCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 3799999 99988777765543 6899998643 3335555543 353 556888656885 456899999753
Q ss_pred cccccChhhhhchhhhhhhhccC-c-eEEEecC
Q 030792 74 ALDYLSPKYLNKTLPDLARVASD-G-VLIFAGY 104 (171)
Q Consensus 74 aLdyLsprylNkTlPeLaRvs~d-g-iVif~g~ 104 (171)
..- +.-+.+.+.+..|+-+. | +++|+-.
T Consensus 250 p~~---~~~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 250 PET---LEAIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp CSS---HHHHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred CCc---hHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 211 11245667777787765 7 4344433
No 159
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=96.83 E-value=0.0011 Score=53.88 Aligned_cols=102 Identities=21% Similarity=0.231 Sum_probs=60.3
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhH---hcc------eeeeeecCCCCCCCCcccEEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH---KGI------VRVADIKFPLPYRAKSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~---kG~------VRvadikfpLPYR~KSFslViv 71 (171)
++||++|.|++.+...|++.. ..+.-|||..+- +-..|+.-.. .|+ +.++|..--||....+||+||+
T Consensus 97 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~--~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 97 RKVLIIGGGDGGVLREVVKHPSVESVVQCEIDED--VIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp CEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHH--HHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHcCCCCEEEEEECCHH--HHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 479999999999999999763 467788886542 2223333322 232 4567763335555789999987
Q ss_pred cccccccChh---hhhchhhhhhhh-ccCceEEEec-CCC
Q 030792 72 SDALDYLSPK---YLNKTLPDLARV-ASDGVLIFAG-YPG 106 (171)
Q Consensus 72 SDaLdyLspr---ylNkTlPeLaRv-s~dgiVif~g-~pg 106 (171)
|+-+...|. +....+.++.|+ ..+|++++.. .|-
T Consensus 175 -d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 213 (304)
T 2o07_A 175 -DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQW 213 (304)
T ss_dssp -ECC-----------CHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred -CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcc
Confidence 776655432 223345555555 5677777654 443
No 160
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.83 E-value=0.0015 Score=48.50 Aligned_cols=93 Identities=18% Similarity=0.168 Sum_probs=58.8
Q ss_pred cceeecCCchhHhHhhhhccc-------ccccccccccc--cchhHHHHHHh------HhcceeeeeecCCCCCCCCccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEE-------TEAWGVEPYDI--EDADARCKSLV------HKGIVRVADIKFPLPYRAKSFP 67 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~-------teAWGVEPyd~--~d~d~~CksLv------~kG~VRvadikfpLPYR~KSFs 67 (171)
+||++|.|++.....|.+.-+ .+..|||+.+- +-+..+.+.+- ..=.+..+|+.-++|- ..+||
T Consensus 87 ~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD 165 (227)
T 1r18_A 87 RILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-NAPYN 165 (227)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-GCSEE
T ss_pred EEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-CCCcc
Confidence 799999999888877776433 48899997652 33333333321 1123456777554442 26899
Q ss_pred EEEEcccccccChhhhhchhhhhhhh-ccCceEEEecC
Q 030792 68 LVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAGY 104 (171)
Q Consensus 68 lVivSDaLdyLsprylNkTlPeLaRv-s~dgiVif~g~ 104 (171)
+|+++.++.++. .++.|+ ..+|.++++=.
T Consensus 166 ~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 166 AIHVGAAAPDTP--------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp EEEECSCBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred EEEECCchHHHH--------HHHHHHhcCCCEEEEEEe
Confidence 999999988765 344443 44666655443
No 161
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=96.79 E-value=0.0012 Score=54.00 Aligned_cols=102 Identities=19% Similarity=0.163 Sum_probs=63.0
Q ss_pred ccceeecCCchhHhHhhhhc-ccccccccccccccchhHHHHHHhHh---cc------eeeeeecCCCCCCCCcccEEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVHK---GI------VRVADIKFPLPYRAKSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e~teAWGVEPyd~~d~d~~CksLv~k---G~------VRvadikfpLPYR~KSFslViv 71 (171)
.+||++|.|++.+...+++. ...+.-|||..+- +-..|+.-..+ |+ +.++|..-.++....+||+||+
T Consensus 118 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~--~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 118 KNVLVVGGGDGGIIRELCKYKSVENIDICEIDET--VIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp CEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHH--HHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHH--HHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 47999999999999999976 3567888876642 22334433322 22 4566764334444678999886
Q ss_pred cccccccChh-hh--hchhhhhhhh-ccCceEEEec-CCC
Q 030792 72 SDALDYLSPK-YL--NKTLPDLARV-ASDGVLIFAG-YPG 106 (171)
Q Consensus 72 SDaLdyLspr-yl--NkTlPeLaRv-s~dgiVif~g-~pg 106 (171)
|..|...|. .+ ...+.++.|+ ..+|++++.. .|-
T Consensus 196 -d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 234 (321)
T 2pt6_A 196 -DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLW 234 (321)
T ss_dssp -ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTT
T ss_pred -CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 665554432 22 3455566655 5677777743 443
No 162
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.74 E-value=0.0016 Score=52.20 Aligned_cols=101 Identities=18% Similarity=0.191 Sum_probs=59.2
Q ss_pred ccceeecCCchhHhHhhhhc-ccccccccccccccchhHHHHHHhH---hc------ceeeeeecCCCCCCCCcccEEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVH---KG------IVRVADIKFPLPYRAKSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e~teAWGVEPyd~~d~d~~CksLv~---kG------~VRvadikfpLPYR~KSFslViv 71 (171)
.+||++|.|++.+...+++. ...+..|||..+. +-..|+.-.. .| -+.++|..-.++....+||+||+
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~--~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGL--VIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHH--HHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHH--HHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 37999999999999999976 3567888886542 1222332221 12 24566764345555788999985
Q ss_pred cccccc-cChh---hhhchhhhhhhh-ccCceEEEec-CC
Q 030792 72 SDALDY-LSPK---YLNKTLPDLARV-ASDGVLIFAG-YP 105 (171)
Q Consensus 72 SDaLdy-Lspr---ylNkTlPeLaRv-s~dgiVif~g-~p 105 (171)
|+.+. +.|. |....+.++.|+ ..+|++++.. .|
T Consensus 170 -d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 208 (296)
T 1inl_A 170 -DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDP 208 (296)
T ss_dssp -EC----------CCSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred -cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 66554 3221 223445555554 5677777753 44
No 163
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.74 E-value=0.0019 Score=51.30 Aligned_cols=108 Identities=19% Similarity=0.111 Sum_probs=60.0
Q ss_pred ccceeecCCchhHhHhhhhccc--cccccccccc--ccchhHHHHHHh------------HhcceeeeeecCCC-CCCCC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE--TEAWGVEPYD--IEDADARCKSLV------------HKGIVRVADIKFPL-PYRAK 64 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~--teAWGVEPyd--~~d~d~~CksLv------------~kG~VRvadikfpL-PYR~K 64 (171)
.+||++|.|++.....|.+.-+ .+..|||..+ ++-+..++..+- ..=-+..+|+.-.+ |+...
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~ 186 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSL 186 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC------
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCC
Confidence 3699999999988888886522 7899998765 333444444321 11234567774333 56677
Q ss_pred cccEEEEcccccccChhhhhchhhhhhhhccC-ceEEEe-cCCCcchhhhhhhh
Q 030792 65 SFPLVIVSDALDYLSPKYLNKTLPDLARVASD-GVLIFA-GYPGQQRAKVAELS 116 (171)
Q Consensus 65 SFslVivSDaLdyLsprylNkTlPeLaRvs~d-giVif~-g~pgq~~ak~~els 116 (171)
+||+||. |.. .|. ..++++.|+-+. |.+++. +...|...-+..|.
T Consensus 187 ~fD~V~~-~~~---~~~---~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~ 233 (336)
T 2b25_A 187 TFDAVAL-DML---NPH---VTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIR 233 (336)
T ss_dssp -EEEEEE-CSS---STT---TTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHH
T ss_pred CeeEEEE-CCC---CHH---HHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHH
Confidence 8999986 433 332 267888887554 444433 34444433344343
No 164
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=96.73 E-value=0.0012 Score=54.29 Aligned_cols=102 Identities=21% Similarity=0.187 Sum_probs=60.0
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhHh---c------ceeeeeecCCCCCCCCcccEEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHK---G------IVRVADIKFPLPYRAKSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~k---G------~VRvadikfpLPYR~KSFslViv 71 (171)
++||++|.|++.+...|++.. ..+..+||..+. +-..|+.-..+ | -+.++|..-.|+....+||+||+
T Consensus 110 ~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~--~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 110 KRVLIIGGGDGGILREVLKHESVEKVTMCEIDEM--VIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp CEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHH--HHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHH--HHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 479999999999999999763 467778876542 23344443322 2 24567764335555688999886
Q ss_pred cccccccChh-hh--hchhhhhhhh-ccCceEEEe-cCCC
Q 030792 72 SDALDYLSPK-YL--NKTLPDLARV-ASDGVLIFA-GYPG 106 (171)
Q Consensus 72 SDaLdyLspr-yl--NkTlPeLaRv-s~dgiVif~-g~pg 106 (171)
|+.+.+.|. .| ...+.++.|+ ..+|++++. |.|-
T Consensus 188 -d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 188 -DSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp -CCC-------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred -cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcc
Confidence 777766542 22 4555666655 456777664 3443
No 165
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=96.71 E-value=0.0032 Score=47.58 Aligned_cols=103 Identities=13% Similarity=0.078 Sum_probs=64.3
Q ss_pred cceeecCCchhHhHhhhhc---cccccccccccc--ccchhHHHHHH---------------------------------
Q 030792 3 KVLHVGPDTCSVVSTLLKE---EETEAWGVEPYD--IEDADARCKSL--------------------------------- 44 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke---e~teAWGVEPyd--~~d~d~~CksL--------------------------------- 44 (171)
+||++|-||+.+...|.+. .+.+..|||..+ ++-+..++...
T Consensus 54 ~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (250)
T 1o9g_A 54 TLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAARR 133 (250)
T ss_dssp EEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhhhh
Confidence 6999999999988887754 356889988653 23333333322
Q ss_pred hHhcc----------eeeeeecCCCCC----CCCcccEEEEcccccccCh-------hhhhchhhhhhhh-ccCceEEEe
Q 030792 45 VHKGI----------VRVADIKFPLPY----RAKSFPLVIVSDALDYLSP-------KYLNKTLPDLARV-ASDGVLIFA 102 (171)
Q Consensus 45 v~kG~----------VRvadikfpLPY----R~KSFslVivSDaLdyLsp-------rylNkTlPeLaRv-s~dgiVif~ 102 (171)
++.++ +..+|+.-++|. ...+||+||..-.+-+... ..+.+.+.++.|+ ..+|+++++
T Consensus 134 v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 134 LRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVT 213 (250)
T ss_dssp HHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred hhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEe
Confidence 11111 667888554432 3458999987544333322 4445667777774 567888887
Q ss_pred cCC
Q 030792 103 GYP 105 (171)
Q Consensus 103 g~p 105 (171)
+..
T Consensus 214 ~~~ 216 (250)
T 1o9g_A 214 DRS 216 (250)
T ss_dssp ESS
T ss_pred Ccc
Confidence 654
No 166
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=96.68 E-value=0.0022 Score=47.63 Aligned_cols=100 Identities=11% Similarity=0.019 Sum_probs=60.7
Q ss_pred ccceeecCCchhHhHhhhhc--cccccccccccc--ccchhHHHHHHhHhc--ceeeeeecCCCCCCC-----CcccEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRA-----KSFPLVI 70 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke--e~teAWGVEPyd--~~d~d~~CksLv~kG--~VRvadikfpLPYR~-----KSFslVi 70 (171)
.+||++|.|++.....|.+. .+.+..|||+.+ ++-+..+++..--.. -+.++|..-.+|.-. .+||+|+
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~ 139 (221)
T 3u81_A 60 SLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVF 139 (221)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEE
Confidence 47999999999988888763 467899999865 333444444332112 245667633355433 6999998
Q ss_pred EcccccccChhhhhchhhhhhhhccCceEEEec
Q 030792 71 VSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 103 (171)
Q Consensus 71 vSDaLdyLsprylNkTlPeLaRvs~dgiVif~g 103 (171)
+.-...+..+ ++ +.+-++..+..+|++++..
T Consensus 140 ~d~~~~~~~~-~~-~~~~~~~~LkpgG~lv~~~ 170 (221)
T 3u81_A 140 LDHWKDRYLP-DT-LLLEKCGLLRKGTVLLADN 170 (221)
T ss_dssp ECSCGGGHHH-HH-HHHHHTTCCCTTCEEEESC
T ss_pred EcCCcccchH-HH-HHHHhccccCCCeEEEEeC
Confidence 7554443321 11 2333343466788888764
No 167
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.68 E-value=0.0026 Score=46.70 Aligned_cols=95 Identities=16% Similarity=0.173 Sum_probs=59.6
Q ss_pred ccceeecCCchhHhHhhhhccc--cccccccccc--ccchhHHHHHH------hHhcceeeeeecCCCCCCCCcccEEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE--TEAWGVEPYD--IEDADARCKSL------VHKGIVRVADIKFPLPYRAKSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~--teAWGVEPyd--~~d~d~~CksL------v~kG~VRvadikfpLPYR~KSFslViv 71 (171)
.+||++|.|++.....|.+.-+ .+..|||+++ ++-+..+++.. ...-.+..+|+. ..+....+||+|++
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~i~~ 157 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR-MGYAEEAPYDAIHV 157 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG-GCCGGGCCEEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcc-cCcccCCCcCEEEE
Confidence 3799999999988887775432 5889998765 23344444432 111234567774 33444668999999
Q ss_pred cccccccChhhhhchhhhhhhh-ccCceEEEecCC
Q 030792 72 SDALDYLSPKYLNKTLPDLARV-ASDGVLIFAGYP 105 (171)
Q Consensus 72 SDaLdyLsprylNkTlPeLaRv-s~dgiVif~g~p 105 (171)
...+..+. .++.|+ ..+|+++++-.+
T Consensus 158 ~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 158 GAAAPVVP--------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CSBBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred CCchHHHH--------HHHHHhcCCCcEEEEEEec
Confidence 98886553 345554 456776665444
No 168
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.66 E-value=0.0045 Score=45.37 Aligned_cols=71 Identities=11% Similarity=-0.020 Sum_probs=45.3
Q ss_pred ccceeecCC-chhHhHhhhhcccccccccccccc--cchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEc
Q 030792 2 HKVLHVGPD-TCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS 72 (171)
Q Consensus 2 ~kVLHvGP~-tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivS 72 (171)
.+||++|.| ++.+...|.+..+.+..|||..+- +-+..+++..--.--+..+|+....|+...+||+|++.
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEEC
Confidence 379999999 777666666443788899987653 22333333221112356677644456667999999964
No 169
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.66 E-value=0.0035 Score=47.52 Aligned_cols=118 Identities=16% Similarity=0.132 Sum_probs=69.6
Q ss_pred cceeecCCchhHhHhhhhcc-cccccccccccc--cchhHHHHHHhHh-----cc----eeeeeecCCCC--CCCCcccE
Q 030792 3 KVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI--EDADARCKSLVHK-----GI----VRVADIKFPLP--YRAKSFPL 68 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~--~d~d~~CksLv~k-----G~----VRvadikfpLP--YR~KSFsl 68 (171)
+||++|-|++.....|.+.. +....|||.++- +-+..+++.+-+. |+ +..+|+.-.|| +...+||.
T Consensus 52 ~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d~ 131 (246)
T 2vdv_E 52 TIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLSK 131 (246)
T ss_dssp EEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEEE
T ss_pred EEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccCE
Confidence 69999999999998888665 458999998753 3455555554211 32 55688854577 77889999
Q ss_pred EEEcccccccChhh-----h-hchhhhhhhhcc-CceEEEe-cCCCcchhhhhhhhhcCC
Q 030792 69 VIVSDALDYLSPKY-----L-NKTLPDLARVAS-DGVLIFA-GYPGQQRAKVAELSKFGR 120 (171)
Q Consensus 69 VivSDaLdyLspry-----l-NkTlPeLaRvs~-dgiVif~-g~pgq~~ak~~elskfgr 120 (171)
|++.+.-.+...+. + -..+.++.|+-+ +|+++++ ............+...|+
T Consensus 132 v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 132 MFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp EEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred EEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 98543111110000 0 134556666554 5666664 344433344445555554
No 170
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.65 E-value=0.0031 Score=52.69 Aligned_cols=98 Identities=11% Similarity=0.122 Sum_probs=65.3
Q ss_pred ccceeecCCchhHhHhhhhcc-ccccccccccccc--chhHHHHHHhHhc-----ce--eeeeecCCCCCCCCcccEEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIE--DADARCKSLVHKG-----IV--RVADIKFPLPYRAKSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~--d~d~~CksLv~kG-----~V--RvadikfpLPYR~KSFslViv 71 (171)
.+||++|-|++.+-..|.+.. +.+..|||..+.- -+..+++ ..| .| ..+|+-- +....+||+||+
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~---~ngl~~~~~v~~~~~D~~~--~~~~~~fD~Ii~ 298 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE---TNMPEALDRCEFMINNALS--GVEPFRFNAVLC 298 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH---HHCGGGGGGEEEEECSTTT--TCCTTCEEEEEE
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHH---HcCCCcCceEEEEechhhc--cCCCCCeeEEEE
Confidence 379999999999988888765 6789999987532 2333333 333 24 6678754 445679999998
Q ss_pred cccccc---cChhhhhchhhhhhh-hccCceEEEecC
Q 030792 72 SDALDY---LSPKYLNKTLPDLAR-VASDGVLIFAGY 104 (171)
Q Consensus 72 SDaLdy---LsprylNkTlPeLaR-vs~dgiVif~g~ 104 (171)
...+.+ +......+.+.++.| +..+|++++++.
T Consensus 299 nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 299 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp CCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 766532 223333356778877 477888888763
No 171
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.65 E-value=0.004 Score=47.88 Aligned_cols=92 Identities=11% Similarity=0.148 Sum_probs=56.8
Q ss_pred cceeecCCchhHhHhhhhc-c-ccccccccccc--ccchhHHHHHHh--HhcceeeeeecCCCCCCCCcccEEEEccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke-e-~teAWGVEPyd--~~d~d~~CksLv--~kG~VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
+||++|.|++.+...|++. . .....|+|..+ ++-+..+.+..- ..=-+..+|+.-. +...+||+||. |
T Consensus 115 ~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~V~~-~--- 188 (277)
T 1o54_A 115 RIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG--FDEKDVDALFL-D--- 188 (277)
T ss_dssp EEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC--CSCCSEEEEEE-C---
T ss_pred EEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc--ccCCccCEEEE-C---
Confidence 6999999998888888765 2 57889988754 222333333221 1112455676433 44568999986 3
Q ss_pred ccChhhhhchhhhhhhhcc-CceEEEec
Q 030792 77 YLSPKYLNKTLPDLARVAS-DGVLIFAG 103 (171)
Q Consensus 77 yLsprylNkTlPeLaRvs~-dgiVif~g 103 (171)
+.+....+.++.|+-+ +|.+++..
T Consensus 189 ---~~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 189 ---VPDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp ---CSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred ---CcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 2344577788887654 55555544
No 172
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=96.63 E-value=0.0024 Score=55.78 Aligned_cols=98 Identities=18% Similarity=0.198 Sum_probs=63.4
Q ss_pred ccceeecCCchhHhHhhhhccc-ccccccccccc--cch-------hHHHHHHhH-hcceee--ee-ecCCCCC--CCCc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYDI--EDA-------DARCKSLVH-KGIVRV--AD-IKFPLPY--RAKS 65 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~-teAWGVEPyd~--~d~-------d~~CksLv~-kG~VRv--ad-ikfpLPY--R~KS 65 (171)
.+||++|-|++.+...|.+.-+ .+.+|||..+- +-+ ..+|+.+-- -+.|++ +| ..-+.|+ ...+
T Consensus 244 ~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~~ 323 (433)
T 1u2z_A 244 DTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQ 323 (433)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGG
T ss_pred CEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccccCC
Confidence 3699999999999998887543 47999998763 222 344443210 023443 33 3222233 2478
Q ss_pred ccEEEEcccccccChhhhhchhhhhhhhccCc-eEEEe
Q 030792 66 FPLVIVSDALDYLSPKYLNKTLPDLARVASDG-VLIFA 102 (171)
Q Consensus 66 FslVivSDaLdyLsprylNkTlPeLaRvs~dg-iVif~ 102 (171)
||+|++++++ + ...++..|.++.|+-+.| .+++.
T Consensus 324 FDvIvvn~~l-~--~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 324 CDVILVNNFL-F--DEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp CSEEEECCTT-C--CHHHHHHHHHHHTTCCTTCEEEES
T ss_pred CCEEEEeCcc-c--cccHHHHHHHHHHhCCCCeEEEEe
Confidence 9999998877 2 356788899999998755 44444
No 173
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=96.53 E-value=0.0029 Score=48.38 Aligned_cols=100 Identities=17% Similarity=0.139 Sum_probs=63.0
Q ss_pred cceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhHhcc--e--eeeeecCCCC--CCCCcccEEEEc--c
Q 030792 3 KVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGI--V--RVADIKFPLP--YRAKSFPLVIVS--D 73 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~kG~--V--RvadikfpLP--YR~KSFslVivS--D 73 (171)
.||++|-|++.+...|.+.. +....|||++.-- ++.-.+..-+.|+ | ..+|+.-.|| +...|||.|++. |
T Consensus 37 ~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~-l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~ 115 (218)
T 3dxy_A 37 VTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPG-VGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPD 115 (218)
T ss_dssp EEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHH-HHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESCC
T ss_pred eEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHH-HHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCCC
Confidence 69999999999988887653 5679999998532 2222222233443 3 3466543344 668899999876 3
Q ss_pred cccccChhhhh------chhhhhhh-hccCceEEEecCC
Q 030792 74 ALDYLSPKYLN------KTLPDLAR-VASDGVLIFAGYP 105 (171)
Q Consensus 74 aLdyLsprylN------kTlPeLaR-vs~dgiVif~g~p 105 (171)
- |...+... ..+.+++| +...|+++++..+
T Consensus 116 p--~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 116 P--WHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp C--CCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred C--ccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 3 22222222 26778888 5667877776643
No 174
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=96.48 E-value=0.0064 Score=49.38 Aligned_cols=51 Identities=16% Similarity=0.333 Sum_probs=40.3
Q ss_pred eeecCCCCCC-CCcccEEEEcccccccChhhhhchhhhhhhhccCceEEEecC
Q 030792 53 ADIKFPLPYR-AKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGY 104 (171)
Q Consensus 53 adikfpLPYR-~KSFslVivSDaLdyLsprylNkTlPeLaRvs~dgiVif~g~ 104 (171)
+|+ +..||. ..+||+|+..++|-|+.|.-..+.+.++.++=+.|=++|.|.
T Consensus 201 ~dl-~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 201 VNL-LEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp CCT-TCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred ccc-CCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 455 334554 468999999999999999999999999999876666666663
No 175
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.47 E-value=0.004 Score=54.05 Aligned_cols=94 Identities=14% Similarity=0.154 Sum_probs=60.5
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-hcc-----eeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI-----VRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-kG~-----VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||++|-|++.+...|.+....+..|||+.++ + ..++..++ .|+ +..+|+ +.+|+. .+||+|++.-.+
T Consensus 160 ~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~--l-~~A~~~~~~~gl~~~v~~~~~d~-~~~~~~-~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAGARKIYAVEASTM--A-QHAEVLVKSNNLTDRIVVIPGKV-EEVSLP-EQVDIIISEPMG 234 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTTCSEEEEEECHHH--H-HHHHHHHHHTTCTTTEEEEESCT-TTCCCS-SCEEEEECCCCH
T ss_pred CEEEEecCcccHHHHHHHHcCCCEEEEEEcHHH--H-HHHHHHHHHcCCCCcEEEEECch-hhCccC-CCeEEEEEeCch
Confidence 369999999999887777655568999998863 2 23333332 233 345666 334443 579999875555
Q ss_pred cccChhhhhchhhhhhhhc-cCceEE
Q 030792 76 DYLSPKYLNKTLPDLARVA-SDGVLI 100 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs-~dgiVi 100 (171)
.++..+.+-.++-++.|+- .+|+++
T Consensus 235 ~~~~~e~~~~~l~~~~~~LkpgG~li 260 (480)
T 3b3j_A 235 YMLFNERMLESYLHAKKYLKPSGNMF 260 (480)
T ss_dssp HHHTCHHHHHHHHHGGGGEEEEEEEE
T ss_pred HhcCcHHHHHHHHHHHHhcCCCCEEE
Confidence 6676555555665666654 455555
No 176
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=96.47 E-value=0.0049 Score=47.06 Aligned_cols=99 Identities=17% Similarity=0.154 Sum_probs=63.6
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcc----eeeeee-cCCCCCCCCcccEEEEcccc-
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGI----VRVADI-KFPLPYRAKSFPLVIVSDAL- 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~----VRvadi-kfpLPYR~KSFslVivSDaL- 75 (171)
.+||+||.|++.....|++....+.+|||+.+ +.-..++...++.- +..+|. ....+.-..+||.|+. |+.
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~--~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~-D~~~ 138 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPIDEHWIIECND--GVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY-DTYP 138 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCEEEEEEEECCH--HHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE-CCCC
T ss_pred CeEEEECCCccHHHHHHHHhCCcEEEEEeCCH--HHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEE-eeee
Confidence 37999999999998888877778899999984 33445555444322 223332 1244667889999864 332
Q ss_pred cc---cChhhhhchhhhhhhhcc-CceEEEec
Q 030792 76 DY---LSPKYLNKTLPDLARVAS-DGVLIFAG 103 (171)
Q Consensus 76 dy---LsprylNkTlPeLaRvs~-dgiVif~g 103 (171)
.. ..-.+..+.+.|+.||=+ .|+.+|..
T Consensus 139 ~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 11 112345678889999765 56666653
No 177
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.44 E-value=0.0055 Score=43.54 Aligned_cols=99 Identities=14% Similarity=0.159 Sum_probs=59.4
Q ss_pred ccceeecCCchhHhHhhhhccc----------ccccccccccccchhHHHHHHhHhccee-eeeecCCC-------CCCC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE----------TEAWGVEPYDIEDADARCKSLVHKGIVR-VADIKFPL-------PYRA 63 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~----------teAWGVEPyd~~d~d~~CksLv~kG~VR-vadikfpL-------PYR~ 63 (171)
.+||++|-|++.+...|.+.-+ .+..|||++++...+ .=.+. .+|+.-.- ++..
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLE--------GATFLCPADVTDPRTSQRILEVLPG 95 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCT--------TCEEECSCCTTSHHHHHHHHHHSGG
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCC--------CCeEEEeccCCCHHHHHHHHHhcCC
Confidence 3699999999888777776633 679999999854211 11123 45653211 1234
Q ss_pred CcccEEEEccccccc-----Chh----hhhchhhhhhhh-ccCceEEEecCCCcc
Q 030792 64 KSFPLVIVSDALDYL-----SPK----YLNKTLPDLARV-ASDGVLIFAGYPGQQ 108 (171)
Q Consensus 64 KSFslVivSDaLdyL-----spr----ylNkTlPeLaRv-s~dgiVif~g~pgq~ 108 (171)
.+||+|++.-++++. .+. .+.+.+.++.|+ ..+|.+++.-+.+..
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 689999975433331 111 113567777776 456777777655543
No 178
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=96.42 E-value=0.0015 Score=52.80 Aligned_cols=98 Identities=20% Similarity=0.245 Sum_probs=62.4
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhH---hc-------ceeeeeecCCCCCCCCcccEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH---KG-------IVRVADIKFPLPYRAKSFPLVI 70 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~---kG-------~VRvadikfpLPYR~KSFslVi 70 (171)
.+||++|-|++.+...|++.. ..+.-|||..+. +-..|+.-.. .| -+.++|+.--++....+||+||
T Consensus 79 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~--~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 79 KRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGE--LVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHH--HHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHH--HHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 479999999999999999763 567888887642 2233443322 22 3556777443555578999998
Q ss_pred Eccccccc---Ch-hhh--hchhhhhhhh-ccCceEEEe
Q 030792 71 VSDALDYL---SP-KYL--NKTLPDLARV-ASDGVLIFA 102 (171)
Q Consensus 71 vSDaLdyL---sp-ryl--NkTlPeLaRv-s~dgiVif~ 102 (171)
+ |..++. .| ..| ...+.++.|+ ..+|++++.
T Consensus 157 ~-d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 157 I-DLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp E-ECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred E-CCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 7 666655 32 121 3445556654 557777665
No 179
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.40 E-value=0.0099 Score=47.36 Aligned_cols=67 Identities=13% Similarity=0.242 Sum_probs=45.7
Q ss_pred cceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHhc--ceeeeeecCCCCCCCCcc---cEEEEc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRAKSF---PLVIVS 72 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~kG--~VRvadikfpLPYR~KSF---slVivS 72 (171)
+||++|.|++.+.-.|.++.+.+..|||.++ ++-+..|++.+--.+ -+..+|+--++| .+| |+|++.
T Consensus 126 ~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~---~~f~~~D~Ivsn 199 (284)
T 1nv8_A 126 TVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK---EKFASIEMILSN 199 (284)
T ss_dssp EEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG---GGTTTCCEEEEC
T ss_pred EEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc---cccCCCCEEEEc
Confidence 6999999999998888876567889998764 333555555431111 244577755554 579 998873
No 180
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=96.31 E-value=0.009 Score=49.24 Aligned_cols=100 Identities=18% Similarity=0.173 Sum_probs=62.7
Q ss_pred ccceeecCCchhHhHhhhhccc-ccccccccccc--cchhHHHHHHhHhcc-----eeeeeecCCCCCCCCcccEEEEcc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYDI--EDADARCKSLVHKGI-----VRVADIKFPLPYRAKSFPLVIVSD 73 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~-teAWGVEPyd~--~d~d~~CksLv~kG~-----VRvadikfpLPYR~KSFslVivSD 73 (171)
.+|||+|-||+.+.-.+.+... ....|+|..+- +-+..| +-+.|+ +.++|+ +.+|....+||+||+.-
T Consensus 219 ~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n---~~~~gl~~~i~~~~~D~-~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 219 GSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMN---ALAAGVLDKIKFIQGDA-TQLSQYVDSVDFAISNL 294 (373)
T ss_dssp CCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHH---HHHTTCGGGCEEEECCG-GGGGGTCSCEEEEEEEC
T ss_pred CEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH---HHHcCCCCceEEEECCh-hhCCcccCCcCEEEECC
Confidence 3699999999999888775433 27788876542 223333 333453 567888 66787788999998831
Q ss_pred ccc------ccChhhhhchhhhhhhhccCceEEEecCC
Q 030792 74 ALD------YLSPKYLNKTLPDLARVASDGVLIFAGYP 105 (171)
Q Consensus 74 aLd------yLsprylNkTlPeLaRvs~dgiVif~g~p 105 (171)
-.. ...+.-..+.+.++.|+-..+++++++.|
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~~~~ 332 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVLEKRGVFITTEK 332 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHEEEEEEEEESCH
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHcCCeEEEEECCH
Confidence 100 00111125566788887666667776643
No 181
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=96.27 E-value=0.0037 Score=50.14 Aligned_cols=98 Identities=22% Similarity=0.290 Sum_probs=57.5
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHh---H------hcceeeeeecCCCCC--CCCcccEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV---H------KGIVRVADIKFPLPY--RAKSFPLV 69 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv---~------kG~VRvadikfpLPY--R~KSFslV 69 (171)
.+||++|-|++.+...|++.. ..+..|||..+. +-..|+.-. . +=-+.++|+. .++. ...+||+|
T Consensus 97 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~--~i~~a~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 97 ERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGE--VMEQSKQHFPQISRSLADPRATVRVGDGL-AFVRQTPDNTYDVV 173 (304)
T ss_dssp CEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHH--HHHHHHHHCHHHHGGGGCTTEEEEESCHH-HHHHSSCTTCEEEE
T ss_pred CeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHH--HHHHHHHHhHHhhcccCCCcEEEEECcHH-HHHHhccCCceeEE
Confidence 379999999999999999763 457888887642 222333322 1 1135567763 3333 36899999
Q ss_pred EEcccccccCh-hhh--hchhhhhhhh-ccCceEEEec
Q 030792 70 IVSDALDYLSP-KYL--NKTLPDLARV-ASDGVLIFAG 103 (171)
Q Consensus 70 ivSDaLdyLsp-ryl--NkTlPeLaRv-s~dgiVif~g 103 (171)
|+ |..++..| ..| ...+-++.|+ ..+|++++.+
T Consensus 174 i~-d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 174 II-DTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EE-ECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EE-CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 87 66665543 112 3445566665 4567776654
No 182
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=96.26 E-value=0.0031 Score=50.03 Aligned_cols=99 Identities=19% Similarity=0.256 Sum_probs=60.6
Q ss_pred ccceeecCCchhHhHhhhhc-ccccccccccccccchhHHHHHHhH---------hcceeeeeecCCCCCCCCcccEEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVH---------KGIVRVADIKFPLPYRAKSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e~teAWGVEPyd~~d~d~~CksLv~---------kG~VRvadikfpLPYR~KSFslViv 71 (171)
++||++|.|++.+...+++. ...+.-+||..+. +-..|+.-.. +=-+.++|..--|+-...+||+||+
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~--~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 77 EHVLVVGGGDGGVIREILKHPSVKKATLVDIDGK--VIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp CEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHH--HHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CEEEEECCchHHHHHHHHhCCCCceEEEEECCHH--HHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 47999999999999999976 3467788876542 2223333221 1135567764335545689999987
Q ss_pred cccccccChh-h--hhchhhhhhh-hccCceEEEec
Q 030792 72 SDALDYLSPK-Y--LNKTLPDLAR-VASDGVLIFAG 103 (171)
Q Consensus 72 SDaLdyLspr-y--lNkTlPeLaR-vs~dgiVif~g 103 (171)
|..+...|. . -...+.++.| +..+|++++..
T Consensus 155 -d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 155 -DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp -SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred -CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 777654321 1 1233445444 45677777753
No 183
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=96.23 E-value=0.0054 Score=47.49 Aligned_cols=113 Identities=13% Similarity=0.135 Sum_probs=70.8
Q ss_pred cceeecCCchhHhHhhhhcc-cccccccccccc--cchhHHHHHHhH---hc----ceeeeeecCCCC--CCCCcccEEE
Q 030792 3 KVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI--EDADARCKSLVH---KG----IVRVADIKFPLP--YRAKSFPLVI 70 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~--~d~d~~CksLv~---kG----~VRvadikfpLP--YR~KSFslVi 70 (171)
.||+||.|++.....|.+.- +....|||+++- +-+..+++.|-+ .| .+..+|+.-.|| +...+||.|+
T Consensus 49 ~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~ 128 (235)
T 3ckk_A 49 EFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMF 128 (235)
T ss_dssp EEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEEE
T ss_pred eEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEEE
Confidence 58999999999998888653 578899999852 335555555422 23 244678754577 7788999997
Q ss_pred EcccccccChhhh----------hchhhhhhhhcc-CceEEEec-CCCcchhhhhhhhhcC
Q 030792 71 VSDALDYLSPKYL----------NKTLPDLARVAS-DGVLIFAG-YPGQQRAKVAELSKFG 119 (171)
Q Consensus 71 vSDaLdyLspryl----------NkTlPeLaRvs~-dgiVif~g-~pgq~~ak~~elskfg 119 (171)
.. |-.|-.- ...|-+++|+-+ .|+++|+. .+.+...-...+.+.|
T Consensus 129 ~~----~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 129 FL----FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp EE----SCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred Ee----CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 53 2222211 245677777754 56666643 5555544455555544
No 184
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=96.18 E-value=0.0045 Score=55.46 Aligned_cols=97 Identities=15% Similarity=0.239 Sum_probs=66.8
Q ss_pred cceeecCCchhHhHhhhhcccc-ccccccccc-ccc-hhHHH---HHHh-Hhcc------eeeeeecCCCCCCC--Cccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEET-EAWGVEPYD-IED-ADARC---KSLV-HKGI------VRVADIKFPLPYRA--KSFP 67 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~t-eAWGVEPyd-~~d-~d~~C---ksLv-~kG~------VRvadikfpLPYR~--KSFs 67 (171)
+|||+|-|++.++-.+.++-+. .++|||..+ +-+ +..+. +... ..|+ +..+|+ +.+|+.. .+||
T Consensus 176 ~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~-~~lp~~d~~~~aD 254 (438)
T 3uwp_A 176 LFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF-LSEEWRERIANTS 254 (438)
T ss_dssp EEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCT-TSHHHHHHHHTCS
T ss_pred EEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcc-cCCccccccCCcc
Confidence 6999999999999988766554 499999985 222 33322 1111 1243 456898 6788875 5899
Q ss_pred EEEEcccccccChhhhhchhhhhhhhccCceEEEec
Q 030792 68 LVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 103 (171)
Q Consensus 68 lVivSDaLdyLsprylNkTlPeLaRvs~dgiVif~g 103 (171)
+|++...+ .. ..++..|-|+.|+-..|=.|.+.
T Consensus 255 VVf~Nn~~--F~-pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 255 VIFVNNFA--FG-PEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp EEEECCTT--CC-HHHHHHHHHHHTTSCTTCEEEES
T ss_pred EEEEcccc--cC-chHHHHHHHHHHcCCCCcEEEEe
Confidence 99987664 33 46888999999987766554444
No 185
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.15 E-value=0.0071 Score=45.62 Aligned_cols=95 Identities=11% Similarity=0.136 Sum_probs=59.5
Q ss_pred ccceeecCCchhHhHhhhhc-cccccccccccc--ccchhHHHHHHhH--hcceeeeeecCCCC-CCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLP-YRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e~teAWGVEPyd--~~d~d~~CksLv~--kG~VRvadikfpLP-YR~KSFslVivSDaL 75 (171)
.+||++|.|++.....|.+. .+.+..|||..+ ++-+..+++..-- +=-+.++|+.-.+| .-..+||+|++.-.
T Consensus 73 ~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~- 151 (232)
T 3ntv_A 73 KNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA- 151 (232)
T ss_dssp CEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT-
T ss_pred CEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc-
Confidence 47999999999998888863 367889998765 2333333332211 11356688865567 66789999985422
Q ss_pred cccChhhhhchhhhhhhh-ccCceEEE
Q 030792 76 DYLSPKYLNKTLPDLARV-ASDGVLIF 101 (171)
Q Consensus 76 dyLsprylNkTlPeLaRv-s~dgiVif 101 (171)
+......+.++.|+ ...|++++
T Consensus 152 ----~~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 152 ----KAQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp ----SSSHHHHHHHHGGGEEEEEEEEE
T ss_pred ----HHHHHHHHHHHHHhcCCCeEEEE
Confidence 22223345555554 55677766
No 186
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=96.15 E-value=0.005 Score=48.94 Aligned_cols=99 Identities=18% Similarity=0.166 Sum_probs=61.7
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhHh-------c--ceeeeeecCCCCCCCCcccEEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHK-------G--IVRVADIKFPLPYRAKSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~k-------G--~VRvadikfpLPYR~KSFslViv 71 (171)
.+||++|.|++++...+++.. ..+.-|||..+. +-..|+.-... . -+.++|..-.++-...+||+||+
T Consensus 80 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~--~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 80 KNVLVVGGGDGGIIRELCKYKSVENIDICEIDET--VIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp CEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHH--HHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHH--HHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 479999999999999999764 456777776542 22334443321 1 35567764334444788999987
Q ss_pred cccccccChh-hh--hchhhhhhhh-ccCceEEEec
Q 030792 72 SDALDYLSPK-YL--NKTLPDLARV-ASDGVLIFAG 103 (171)
Q Consensus 72 SDaLdyLspr-yl--NkTlPeLaRv-s~dgiVif~g 103 (171)
|..+...|. .| ...+-++.|+ ..+|++++..
T Consensus 158 -d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 158 -DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp -ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred -cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 665555442 22 3445555554 5677777664
No 187
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=96.15 E-value=0.0061 Score=45.23 Aligned_cols=94 Identities=11% Similarity=0.089 Sum_probs=57.6
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHh-Hhc-----ceeeeeecCCCCCC--CCcccEEEEc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKG-----IVRVADIKFPLPYR--AKSFPLVIVS 72 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv-~kG-----~VRvadikfpLPYR--~KSFslVivS 72 (171)
.+||++|.|++.....|.+.- +.+..|||+.+- .-..++..+ +.| .+..+|+.-.+|.- ..+||+||+.
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~--~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPEATIVSIERDER--RYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHH--HHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHH--HHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 379999999998887777553 578899987642 122233322 223 23456765445654 5789999986
Q ss_pred ccccccChhhhhchhhhhhhh-ccCceEEEe
Q 030792 73 DALDYLSPKYLNKTLPDLARV-ASDGVLIFA 102 (171)
Q Consensus 73 DaLdyLsprylNkTlPeLaRv-s~dgiVif~ 102 (171)
...+ ...+.+.++.|+ ..+|++++.
T Consensus 134 ~~~~-----~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 134 AAKG-----QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp GGGS-----CHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCHH-----HHHHHHHHHHHHcCCCeEEEEE
Confidence 5543 223344445554 456777775
No 188
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.15 E-value=0.011 Score=49.85 Aligned_cols=96 Identities=15% Similarity=0.251 Sum_probs=62.5
Q ss_pred ccceeecCCchhHhHhhhhc-ccccccccccccccchhHHHHHHhHh-cc----eeeeeecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVHK-GI----VRVADIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e~teAWGVEPyd~~d~d~~CksLv~k-G~----VRvadikfpLPYR~KSFslVivSDaL 75 (171)
.+||+||-|+.+.-+.++.. -+...-|||..+- .-..++..+++ |+ +..+|. ..+| ..+||+|+++-.
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~--~l~~Ar~~~~~~gl~~v~~v~gDa-~~l~--d~~FDvV~~~a~- 197 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPD--IAELSRKVIEGLGVDGVNVITGDE-TVID--GLEFDVLMVAAL- 197 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHH--HHHHHHHHHHHHTCCSEEEEESCG-GGGG--GCCCSEEEECTT-
T ss_pred CEEEEECCCccHHHHHHHHHccCCEEEEEECCHH--HHHHHHHHHHhcCCCCeEEEECch-hhCC--CCCcCEEEECCC-
Confidence 47999999987655444432 4678888887642 22334444433 54 345677 4577 689999997543
Q ss_pred cccChhhhhchhhhhhhhc-cCceEEEecCCCc
Q 030792 76 DYLSPKYLNKTLPDLARVA-SDGVLIFAGYPGQ 107 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs-~dgiVif~g~pgq 107 (171)
. ....+.+.++.|+- ..|++++...+|.
T Consensus 198 ---~-~d~~~~l~el~r~LkPGG~Lvv~~~~~~ 226 (298)
T 3fpf_A 198 ---A-EPKRRVFRNIHRYVDTETRIIYRTYTGM 226 (298)
T ss_dssp ---C-SCHHHHHHHHHHHCCTTCEEEEEECCGG
T ss_pred ---c-cCHHHHHHHHHHHcCCCcEEEEEcCcch
Confidence 2 33457899999975 5677777766664
No 189
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=96.14 E-value=0.0075 Score=44.07 Aligned_cols=92 Identities=14% Similarity=0.111 Sum_probs=56.3
Q ss_pred ccceeecCCchhHhHhhhhcc--cccccccccccc--cchhHHHHHHhHhcc-----eeeeeecCCCCCCCCcccEEEEc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYDI--EDADARCKSLVHKGI-----VRVADIKFPLPYRAKSFPLVIVS 72 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee--~teAWGVEPyd~--~d~d~~CksLv~kG~-----VRvadikfpLPYR~KSFslVivS 72 (171)
.+||++|.|++.....|.+.- +.+..|||+++- +-+..+++ +.|+ +..+|..-.+|.-.. ||+|++.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~---~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLH---DNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH---HHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH---HCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 479999999999888887542 678899998642 22333333 2332 445676444565556 9999864
Q ss_pred ccccccChhhhhchhhhhhhh-ccCceEEEe
Q 030792 73 DALDYLSPKYLNKTLPDLARV-ASDGVLIFA 102 (171)
Q Consensus 73 DaLdyLsprylNkTlPeLaRv-s~dgiVif~ 102 (171)
+ ........+.++.|+ ..+|++++.
T Consensus 134 -~----~~~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 134 -C----DVFNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp -T----TTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred -C----ChhhhHHHHHHHHHhcCCCeEEEEE
Confidence 2 122233445555554 456777764
No 190
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.06 E-value=0.0043 Score=48.10 Aligned_cols=95 Identities=16% Similarity=0.134 Sum_probs=56.3
Q ss_pred ccceeecCCchhHhHhhhhc--ccccccccccccccchhHHHHHHh-Hhcc-----eeeeeecCCCCCC------CCccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLV-HKGI-----VRVADIKFPLPYR------AKSFP 67 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke--e~teAWGVEPyd~~d~d~~CksLv-~kG~-----VRvadikfpLPYR------~KSFs 67 (171)
++||++|.|++.....|.+. ++.+..|||.++- .-..++..+ +.|+ +.++|..--+|.- ..+||
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~--~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAIPEDGKILAMDINKE--NYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCH--HHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHH--HHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 47999999999988777754 2678999998752 222233322 2343 4556664334422 57899
Q ss_pred EEEEcccccccChhhhhchhhhhhh-hccCceEEEec
Q 030792 68 LVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAG 103 (171)
Q Consensus 68 lVivSDaLdyLsprylNkTlPeLaR-vs~dgiVif~g 103 (171)
+|++ |+-.--.+.|+ .++.| +...|++++..
T Consensus 159 ~V~~-d~~~~~~~~~l----~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 159 FIFV-DADKDNYLNYH----KRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEEE-CSCSTTHHHHH----HHHHHHBCTTCCEEEEC
T ss_pred EEEE-cCchHHHHHHH----HHHHHhCCCCeEEEEec
Confidence 9986 33211123344 44444 45677877743
No 191
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=96.05 E-value=0.011 Score=45.21 Aligned_cols=97 Identities=14% Similarity=0.064 Sum_probs=58.0
Q ss_pred ccceeecCCchhHhHhhhhcc--ccccccccccc--ccchhHHHHHHhHhc--ceeeeeecCCCCCCC--CcccEEEEcc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRA--KSFPLVIVSD 73 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee--~teAWGVEPyd--~~d~d~~CksLv~kG--~VRvadikfpLPYR~--KSFslVivSD 73 (171)
.+||++|.|++.....|.+.- +.+..|||..+ ++-+..+++..--.. -+.++|..-.+|.-. .+||+|++ |
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~-d 143 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI-D 143 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE-C
T ss_pred CEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE-C
Confidence 479999999999888887542 67889998764 233334433221111 245677644455544 38999987 4
Q ss_pred cccccChhhhhchhhhhhhh-ccCceEEEec
Q 030792 74 ALDYLSPKYLNKTLPDLARV-ASDGVLIFAG 103 (171)
Q Consensus 74 aLdyLsprylNkTlPeLaRv-s~dgiVif~g 103 (171)
+- ....-..+.++.|+ ...|++++..
T Consensus 144 ~~----~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 144 AD----KPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp SC----GGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred Cc----hHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 32 22222345555554 4567777654
No 192
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=95.99 E-value=0.011 Score=49.02 Aligned_cols=101 Identities=21% Similarity=0.185 Sum_probs=61.6
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhHh---cc------eeeeeecCCCC-CCCCcccEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHK---GI------VRVADIKFPLP-YRAKSFPLVI 70 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~k---G~------VRvadikfpLP-YR~KSFslVi 70 (171)
++||++|.|++.+...|++.. ..+..|||..+. +-..|+.-..+ |+ +.++|..-.++ ....+||+||
T Consensus 122 ~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~--~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 122 KKVLVIGGGDGGVLREVARHASIEQIDMCEIDKM--VVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHH--HHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CEEEEECCCccHHHHHHHHcCCCCEEEEEECCHH--HHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 479999999999999999764 467888887653 22334333321 32 45677632233 3357899988
Q ss_pred EcccccccChhh---hhchhhhhhhh-ccCceEEEe-cCC
Q 030792 71 VSDALDYLSPKY---LNKTLPDLARV-ASDGVLIFA-GYP 105 (171)
Q Consensus 71 vSDaLdyLspry---lNkTlPeLaRv-s~dgiVif~-g~p 105 (171)
+ |..+...+.. ....+.++.|+ ..+|++++. +.|
T Consensus 200 ~-d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 238 (334)
T 1xj5_A 200 V-DSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESL 238 (334)
T ss_dssp E-CCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred E-CCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 6 6554333211 23445566655 567788775 444
No 193
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=95.97 E-value=0.0083 Score=47.85 Aligned_cols=93 Identities=22% Similarity=0.315 Sum_probs=56.6
Q ss_pred cceeecCCchhHhHhhhhc--ccccccccccccc--cchhHHHHHHhHhcc-eeeeeecCCCCCC--CCcccEEEEcccc
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDI--EDADARCKSLVHKGI-VRVADIKFPLPYR--AKSFPLVIVSDAL 75 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd~--~d~d~~CksLv~kG~-VRvadikfpLPYR--~KSFslVivSDaL 75 (171)
+||++|.||++..+.|.+. .++...|||.++- +++-..++. +.++ ..++|+..|.+|. ..+||+|++ |+-
T Consensus 79 ~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~--r~nv~~i~~Da~~~~~~~~~~~~~D~I~~-d~a 155 (232)
T 3id6_C 79 KVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR--RPNIFPLLADARFPQSYKSVVENVDVLYV-DIA 155 (232)
T ss_dssp EEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH--CTTEEEEECCTTCGGGTTTTCCCEEEEEE-CCC
T ss_pred EEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh--cCCeEEEEcccccchhhhccccceEEEEe-cCC
Confidence 6999999999988776643 4668999998763 223233332 1232 4568887776665 468999875 433
Q ss_pred cccChhhhhchhhhhhh--hccCceEEEe
Q 030792 76 DYLSPKYLNKTLPDLAR--VASDGVLIFA 102 (171)
Q Consensus 76 dyLsprylNkTlPeLaR--vs~dgiVif~ 102 (171)
. |.+. +.|.+.++ +...|.++++
T Consensus 156 ~---~~~~-~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 156 Q---PDQT-DIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp C---TTHH-HHHHHHHHHHEEEEEEEEEE
T ss_pred C---hhHH-HHHHHHHHHhCCCCeEEEEE
Confidence 2 3322 22333344 5566776665
No 194
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=95.86 E-value=0.018 Score=45.74 Aligned_cols=94 Identities=17% Similarity=0.146 Sum_probs=59.1
Q ss_pred ccceeecCCchhHhHhhhhccc--ccccccccccccchhHHHHHHh-Hhcc----eeeeeecCCCCCCCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE--TEAWGVEPYDIEDADARCKSLV-HKGI----VRVADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~--teAWGVEPyd~~d~d~~CksLv-~kG~----VRvadikfpLPYR~KSFslVivSDa 74 (171)
.+||++|.|++.....|.+... .+..|||+.+- .-..++..+ +.|+ +..+|+.-.+| ...+||+|++...
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~--~~~~a~~~~~~~g~~~v~~~~~d~~~~~~-~~~~fD~Iv~~~~ 153 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRK--ICEIAKRNVERLGIENVIFVCGDGYYGVP-EFSPYDVIFVTVG 153 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHH--HHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEECSB
T ss_pred CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHH--HHHHHHHHHHHcCCCCeEEEECChhhccc-cCCCeEEEEEcCC
Confidence 3799999999888777765432 34899987642 122233332 2232 45677743333 5678999999999
Q ss_pred ccccChhhhhchhhhhhh-hccCceEEEecCCC
Q 030792 75 LDYLSPKYLNKTLPDLAR-VASDGVLIFAGYPG 106 (171)
Q Consensus 75 LdyLsprylNkTlPeLaR-vs~dgiVif~g~pg 106 (171)
++++.. ++.| +..+|++++.-.|.
T Consensus 154 ~~~~~~--------~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 154 VDEVPE--------TWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp BSCCCH--------HHHHHEEEEEEEEEEBCBG
T ss_pred HHHHHH--------HHHHhcCCCcEEEEEECCC
Confidence 998862 3333 34567766654443
No 195
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=95.73 E-value=0.019 Score=45.11 Aligned_cols=94 Identities=7% Similarity=0.023 Sum_probs=60.9
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHhc-c-eeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-I-VRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~kG-~-VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|-||+..--.+.+....+..|||..+ ++.+..|++..--.+ + +..+|+ +.++. ..+||+||+.
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~-~~~~~-~~~fD~Vi~~----- 199 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN-RDFPG-ENIADRILMG----- 199 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT-TTCCC-CSCEEEEEEC-----
T ss_pred CEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCH-HHhcc-cCCccEEEEC-----
Confidence 36999999999988888766555799998765 444555554321112 2 567888 44444 7899999873
Q ss_pred cChhhhhchhhhhhhhccC-ceEEEec
Q 030792 78 LSPKYLNKTLPDLARVASD-GVLIFAG 103 (171)
Q Consensus 78 LsprylNkTlPeLaRvs~d-giVif~g 103 (171)
.|....+.+.++.|+-+. |++++..
T Consensus 200 -~p~~~~~~l~~~~~~LkpgG~l~~~~ 225 (278)
T 2frn_A 200 -YVVRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp -CCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred -CchhHHHHHHHHHHHCCCCeEEEEEE
Confidence 223335567777776654 5555544
No 196
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=95.68 E-value=0.013 Score=43.96 Aligned_cols=94 Identities=11% Similarity=0.156 Sum_probs=56.1
Q ss_pred ccceeecCCchhHhHhhhhcc--cccccccccccccchhHHHHHHhH-hcc-----eeeeeecCCCCC------------
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYDIEDADARCKSLVH-KGI-----VRVADIKFPLPY------------ 61 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee--~teAWGVEPyd~~d~d~~CksLv~-kG~-----VRvadikfpLPY------------ 61 (171)
.+||++|.|++.....|.+.- +.+..|||+.+- .-..++...+ .|+ +..+|+.-.+|.
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~--~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEE--WTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHH--HHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHH--HHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 479999999999888887653 578999987652 2223333332 232 345665333331
Q ss_pred --C-C-CcccEEEEcccccccChhhhhchhhhhhhhc-cCceEEEe
Q 030792 62 --R-A-KSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFA 102 (171)
Q Consensus 62 --R-~-KSFslVivSDaLdyLsprylNkTlPeLaRvs-~dgiVif~ 102 (171)
- . .+||+||+.-..+ .+...+.++.|+- .+|++++.
T Consensus 140 ~f~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~ 180 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDADKE-----NYPNYYPLILKLLKPGGLLIAD 180 (239)
T ss_dssp TTCCSTTCEEEEEECSCGG-----GHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCCCCCcCEEEEeCCHH-----HHHHHHHHHHHHcCCCeEEEEE
Confidence 1 2 7899998764322 2234455555554 46666664
No 197
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=95.61 E-value=0.005 Score=47.02 Aligned_cols=95 Identities=17% Similarity=0.152 Sum_probs=55.4
Q ss_pred ccceeecCCchhHhHhhhhc--ccccccccccccccchhHHHHHHh-Hhcc-----eeeeeecCCCCC------CCCccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLV-HKGI-----VRVADIKFPLPY------RAKSFP 67 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke--e~teAWGVEPyd~~d~d~~CksLv-~kG~-----VRvadikfpLPY------R~KSFs 67 (171)
++||++|.|++.....|.+. ++.+..|||.++- .-..++..+ +.|+ ++++|..--+|- ...+||
T Consensus 72 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~--~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDRE--AYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHH--HHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHH--HHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 47999999999988888764 2678899987642 222333332 2343 345565322332 157899
Q ss_pred EEEEcccccccChhhhhchhhhhhhhccCceEEEe
Q 030792 68 LVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFA 102 (171)
Q Consensus 68 lVivSDaLdyLsprylNkTlPeLaRvs~dgiVif~ 102 (171)
+|++ |+-.-..+.|++..++ .+...|++++.
T Consensus 150 ~I~~-d~~~~~~~~~l~~~~~---~L~pGG~lv~d 180 (237)
T 3c3y_A 150 FGFV-DADKPNYIKYHERLMK---LVKVGGIVAYD 180 (237)
T ss_dssp EEEE-CSCGGGHHHHHHHHHH---HEEEEEEEEEE
T ss_pred EEEE-CCchHHHHHHHHHHHH---hcCCCeEEEEe
Confidence 9986 4322222344444332 24566777764
No 198
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=95.56 E-value=0.011 Score=48.78 Aligned_cols=80 Identities=15% Similarity=0.094 Sum_probs=50.2
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc--cchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 79 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~--~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLs 79 (171)
.+||+||||++.+-..|++. ..+..|||..+- +-+..++.. ...=-+..+|+ ..+|+...+||.|| ++.-=+++
T Consensus 52 ~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~-~~~v~vi~gD~-l~~~~~~~~fD~Iv-~NlPy~is 127 (295)
T 3gru_A 52 DVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKEL-YNNIEIIWGDA-LKVDLNKLDFNKVV-ANLPYQIS 127 (295)
T ss_dssp CEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHH-CSSEEEEESCT-TTSCGGGSCCSEEE-EECCGGGH
T ss_pred CEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhcc-CCCeEEEECch-hhCCcccCCccEEE-EeCccccc
Confidence 36999999999998888854 778899987642 223333331 11113566887 55667677899877 44433444
Q ss_pred hhhhhc
Q 030792 80 PKYLNK 85 (171)
Q Consensus 80 prylNk 85 (171)
..-|-+
T Consensus 128 ~pil~~ 133 (295)
T 3gru_A 128 SPITFK 133 (295)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 443333
No 199
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=95.54 E-value=0.022 Score=45.70 Aligned_cols=70 Identities=20% Similarity=0.276 Sum_probs=42.2
Q ss_pred cceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHhcc----eeeeeecCCCCCCCCcccEEEEccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI----VRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~kG~----VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
+||++|+|++.....|.+. +.+..|||..+ ++.+..+++ +.|+ +..+|+ ..+|+. +||+|++ |.--
T Consensus 45 ~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~---~~~~~~v~~~~~D~-~~~~~~--~~D~Vv~-n~py 116 (299)
T 2h1r_A 45 IVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCL---YEGYNNLEVYEGDA-IKTVFP--KFDVCTA-NIPY 116 (299)
T ss_dssp EEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHH---HTTCCCEEC----C-CSSCCC--CCSEEEE-ECCG
T ss_pred EEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHH---HcCCCceEEEECch-hhCCcc--cCCEEEE-cCCc
Confidence 6999999999998888854 67899999764 222333332 2232 445676 344543 8998875 5443
Q ss_pred ccCh
Q 030792 77 YLSP 80 (171)
Q Consensus 77 yLsp 80 (171)
+.+.
T Consensus 117 ~~~~ 120 (299)
T 2h1r_A 117 KISS 120 (299)
T ss_dssp GGHH
T ss_pred cccc
Confidence 4433
No 200
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=95.45 E-value=0.018 Score=44.65 Aligned_cols=71 Identities=15% Similarity=0.070 Sum_probs=45.1
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccc--cchhHHHHHHhHhc-----ceeeeeecCCC------CCCCCccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI--EDADARCKSLVHKG-----IVRVADIKFPL------PYRAKSFP 67 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~--~d~d~~CksLv~kG-----~VRvadikfpL------PYR~KSFs 67 (171)
.+||++|.||+.+.-.|.+.. +.+..|||..+- +-+..+++.+-..| -+..+|+.-.+ ++...+||
T Consensus 38 ~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD 117 (260)
T 2ozv_A 38 CRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHFH 117 (260)
T ss_dssp EEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEE
T ss_pred CEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCcC
Confidence 369999999998877776553 468889987642 22333332210022 35567885442 36678999
Q ss_pred EEEEc
Q 030792 68 LVIVS 72 (171)
Q Consensus 68 lVivS 72 (171)
+||+.
T Consensus 118 ~Vv~n 122 (260)
T 2ozv_A 118 HVIMN 122 (260)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99875
No 201
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=95.40 E-value=0.021 Score=44.79 Aligned_cols=97 Identities=14% Similarity=0.013 Sum_probs=63.5
Q ss_pred ccceeecCCchhHhHhhhhc-cccccccccccc--ccchhHHHHHHh-HhcceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e~teAWGVEPyd--~~d~d~~CksLv-~kG~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
.+||++|.|++.+--.|.+. ...+..|||..+ ++.+..|++..- ..=.+..+|+.-. |. ..+||+||+.-
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-~~~~D~Vi~d~---- 194 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-KDVADRVIMGY---- 194 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC-TTCEEEEEECC----
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc-cCCceEEEECC----
Confidence 36999999999988877765 356899998764 444555554321 1113566787433 65 67899997643
Q ss_pred cChhhhhchhhhhhhh-ccCceEEEecCCC
Q 030792 78 LSPKYLNKTLPDLARV-ASDGVLIFAGYPG 106 (171)
Q Consensus 78 LsprylNkTlPeLaRv-s~dgiVif~g~pg 106 (171)
|+.+.+.+.++.|+ ..+|+++++..+.
T Consensus 195 --p~~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 195 --VHKTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp --CSSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred --cccHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 33555666665554 5678888777665
No 202
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=95.39 E-value=0.031 Score=45.00 Aligned_cols=101 Identities=10% Similarity=0.108 Sum_probs=59.5
Q ss_pred ccceeecCCchhHhHhhhhc--cccccccccccc--ccchhHHHHHHhHhc-ceeeeeecCCCCCCCCcccEEEE-----
Q 030792 2 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIV----- 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke--e~teAWGVEPyd--~~d~d~~CksLv~kG-~VRvadikfpLPYR~KSFslViv----- 71 (171)
.+|||+|-|+++.-..|.+. ...+..|+|.++ ++.+..+++.+=-.. .+..+|+ ..+|.-..+||+|++
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~-~~~~~~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS-LHIGELNVEFDKILLDAPCT 198 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG-GGGGGGCCCEEEEEEECCTT
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh-hhcccccccCCEEEEeCCCC
Confidence 37999999999988888754 346788988765 333444444321111 2445676 334434568999987
Q ss_pred --------cccccccChhhhh-------chhhhhhhhc-cCceEEEec
Q 030792 72 --------SDALDYLSPKYLN-------KTLPDLARVA-SDGVLIFAG 103 (171)
Q Consensus 72 --------SDaLdyLsprylN-------kTlPeLaRvs-~dgiVif~g 103 (171)
.|+....+++.+. +.|.++.|+- ..|.++++.
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST 246 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 1222334444432 5566677754 567777743
No 203
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=95.39 E-value=0.013 Score=47.16 Aligned_cols=98 Identities=13% Similarity=0.067 Sum_probs=59.6
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHh--Hh--cc-ee--eeeecCCCCCCCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV--HK--GI-VR--VADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv--~k--G~-VR--vadikfpLPYR~KSFslVivSDa 74 (171)
.+|||+|-||++.-..|.+. .+..||+.++|... ..-+.+. .. ++ +. .+|+ +.|| ..+||+|++ |.
T Consensus 84 ~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~m~~~-a~~~~~~~~~~~~~v~~~~~~~D~-~~l~--~~~fD~Vvs-d~ 156 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQ--PNVREVKAYTLGTS-GHEKPRLVETFGWNLITFKSKVDV-TKME--PFQADTVLC-DI 156 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTS--TTEEEEEEECCCCT-TSCCCCCCCCTTGGGEEEECSCCG-GGCC--CCCCSEEEE-CC
T ss_pred CEEEEeccCCCHHHHHHHHc--CCEEEEECchhhhh-hhhchhhhhhcCCCeEEEeccCcH-hhCC--CCCcCEEEE-CC
Confidence 36999999999987777755 78999999987211 0000000 00 22 23 6788 5677 789999976 54
Q ss_pred ccccChhhh------hchhhhhhhh-ccCc--eEEEecC-CCc
Q 030792 75 LDYLSPKYL------NKTLPDLARV-ASDG--VLIFAGY-PGQ 107 (171)
Q Consensus 75 LdyLspryl------NkTlPeLaRv-s~dg--iVif~g~-pgq 107 (171)
. +.++.+. -+.|+++.|+ ...| .+++.-+ |..
T Consensus 157 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~ 198 (276)
T 2wa2_A 157 G-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYS 198 (276)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCS
T ss_pred C-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCc
Confidence 4 4443211 1368888885 5677 5555333 443
No 204
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.34 E-value=0.013 Score=42.83 Aligned_cols=96 Identities=13% Similarity=0.075 Sum_probs=57.4
Q ss_pred ccceeecCCchhHhHhhhhc--cccccccccccc--ccchhHHHHHHhHhc--ceeeeeecCCCCCCC-----CcccEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRA-----KSFPLVI 70 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke--e~teAWGVEPyd--~~d~d~~CksLv~kG--~VRvadikfpLPYR~-----KSFslVi 70 (171)
.+||++|.|++.....|.+. .+.+..|||..+ ++-+..+++..=-.. -+.++|..-.+|.-. .+||+|+
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~ 145 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIY 145 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEE
Confidence 47999999999988888754 267889998765 222333333221111 245567643444322 7999998
Q ss_pred EcccccccChhhhhchhhhhhhh-ccCceEEEe
Q 030792 71 VSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 102 (171)
Q Consensus 71 vSDaLdyLsprylNkTlPeLaRv-s~dgiVif~ 102 (171)
+ |.- .......+.++.|+ ...|++++.
T Consensus 146 ~-~~~----~~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 146 I-DAD----KANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp E-CSC----GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred E-CCC----HHHHHHHHHHHHHhcCCCcEEEEe
Confidence 4 331 33334456666665 456677663
No 205
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=95.29 E-value=0.011 Score=45.17 Aligned_cols=95 Identities=17% Similarity=0.147 Sum_probs=54.2
Q ss_pred cceeecCCchhHhHhhhhc--ccccccccccccc--cchhHHHHHHhHh-cce--eeeeecCCCCC-CCCcccEEEEccc
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDI--EDADARCKSLVHK-GIV--RVADIKFPLPY-RAKSFPLVIVSDA 74 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd~--~d~d~~CksLv~k-G~V--RvadikfpLPY-R~KSFslVivSDa 74 (171)
+||++|.|++..-..|.+. .+.+..|||..+- +-+..+++..--. ..| ..+|..-.+|. ...+||+|++ |+
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~-d~ 137 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG-QV 137 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE-CC
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE-cC
Confidence 7999999999888777753 3678899998753 2233333321111 223 34554333432 2689999986 33
Q ss_pred ccccChhhhhchhhhhhhh-ccCceEEEe
Q 030792 75 LDYLSPKYLNKTLPDLARV-ASDGVLIFA 102 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRv-s~dgiVif~ 102 (171)
- .......+.++.|+ ...|++++.
T Consensus 138 ~----~~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 138 S----PMDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp C----TTTHHHHHHHHHHHEEEEEEEEET
T ss_pred c----HHHHHHHHHHHHHHcCCCcEEEEe
Confidence 2 11112234455554 456777763
No 206
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=95.27 E-value=0.02 Score=45.61 Aligned_cols=95 Identities=18% Similarity=0.029 Sum_probs=56.4
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccccc-c-hhHHH----HHHhH-hcceeeeeecCCCCCCCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIE-D-ADARC----KSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~-d-~d~~C----ksLv~-kG~VRvadikfpLPYR~KSFslVivSDa 74 (171)
++||++|.|++++...+++. +.+..+||..+.- + +..+. ..+-. +=-+.++|. +..+ .+||+||+ |+
T Consensus 74 ~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~-~~~~---~~fD~Ii~-d~ 147 (262)
T 2cmg_A 74 KEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLL-DLDI---KKYDLIFC-LQ 147 (262)
T ss_dssp CEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGG-GSCC---CCEEEEEE-SS
T ss_pred CEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechH-HHHH---hhCCEEEE-CC
Confidence 47999999999999999988 4778888876421 1 11111 11110 112445676 2333 78999986 44
Q ss_pred ccccChhhhhchhhhhhhh-ccCceEEEe-cCCCcc
Q 030792 75 LDYLSPKYLNKTLPDLARV-ASDGVLIFA-GYPGQQ 108 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRv-s~dgiVif~-g~pgq~ 108 (171)
-| |.. .+.++.|+ ..+|++++. |.|...
T Consensus 148 ~d---p~~---~~~~~~~~L~pgG~lv~~~~~~~~~ 177 (262)
T 2cmg_A 148 EP---DIH---RIDGLKRMLKEDGVFISVAKHPLLE 177 (262)
T ss_dssp CC---CHH---HHHHHHTTEEEEEEEEEEEECTTTC
T ss_pred CC---hHH---HHHHHHHhcCCCcEEEEEcCCcccC
Confidence 32 332 45565554 556776664 566543
No 207
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=95.26 E-value=0.022 Score=41.71 Aligned_cols=94 Identities=12% Similarity=0.081 Sum_probs=56.0
Q ss_pred ccceeecCCchhHhHhhhhcc--ccccccccccc--ccchhHHHHHHhHhcc-----eeeeeecCCCCC---C-CCcccE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVADIKFPLPY---R-AKSFPL 68 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee--~teAWGVEPyd--~~d~d~~CksLv~kG~-----VRvadikfpLPY---R-~KSFsl 68 (171)
.+||++|.|++.....|.+.- +.+..|||..+ ++-+..+++ +.|+ +..+|..-.+|- . ..+||+
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~---~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIE---RANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHH---HTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred CEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH---HcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 479999999999988887552 56889998765 232333333 2343 445666333332 1 167999
Q ss_pred EEEcccccccChhhhhchhhhhhhh-ccCceEEEec
Q 030792 69 VIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG 103 (171)
Q Consensus 69 VivSDaLdyLsprylNkTlPeLaRv-s~dgiVif~g 103 (171)
|++.-. .......+.++.|+ ...|++++..
T Consensus 137 v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 137 IFIDAD-----KQNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp EEECSC-----GGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred EEEcCC-----cHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 986432 22223445555554 4567776654
No 208
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=95.24 E-value=0.032 Score=45.30 Aligned_cols=90 Identities=18% Similarity=0.179 Sum_probs=62.3
Q ss_pred cceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHh--HhcceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv--~kG~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
+||++|-||+.+--. .+ ...+.+|||... ++.+..|++..- .+-.+..+|+ +.++ .+||+||+ |
T Consensus 198 ~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~-~~~~---~~fD~Vi~-d----- 265 (336)
T 2yx1_A 198 VVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDV-REVD---VKGNRVIM-N----- 265 (336)
T ss_dssp EEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCG-GGCC---CCEEEEEE-C-----
T ss_pred EEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCh-HHhc---CCCcEEEE-C-----
Confidence 699999999998777 65 678899999654 455666655431 1123456787 3444 88999986 4
Q ss_pred Chhhhhchhhhhhhhc-cCceEEEecC
Q 030792 79 SPKYLNKTLPDLARVA-SDGVLIFAGY 104 (171)
Q Consensus 79 sprylNkTlPeLaRvs-~dgiVif~g~ 104 (171)
.|.+....+.++.|+- .+|++++.+.
T Consensus 266 pP~~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 266 LPKFAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp CTTTGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred CcHhHHHHHHHHHHHcCCCCEEEEEEe
Confidence 3666777888888764 6677777664
No 209
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=95.21 E-value=0.02 Score=45.53 Aligned_cols=62 Identities=29% Similarity=0.287 Sum_probs=40.4
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH------hcceeeeeec-CCCCCCCCcccEEEE
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH------KGIVRVADIK-FPLPYRAKSFPLVIV 71 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~------kG~VRvadik-fpLPYR~KSFslViv 71 (171)
+||++|||++.....|++. +.+..|||+.+- .-..++.... +--+..+|+- +++| +||+|++
T Consensus 31 ~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~--~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~----~fD~vv~ 99 (285)
T 1zq9_A 31 VVLEVGPGTGNMTVKLLEK-AKKVVACELDPR--LVAELHKRVQGTPVASKLQVLVGDVLKTDLP----FFDTCVA 99 (285)
T ss_dssp EEEEECCTTSTTHHHHHHH-SSEEEEEESCHH--HHHHHHHHHTTSTTGGGEEEEESCTTTSCCC----CCSEEEE
T ss_pred EEEEEcCcccHHHHHHHhh-CCEEEEEECCHH--HHHHHHHHHHhcCCCCceEEEEcceecccch----hhcEEEE
Confidence 6999999999998888854 668999987641 1122232221 1234567772 3444 7998776
No 210
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=95.10 E-value=0.011 Score=45.78 Aligned_cols=77 Identities=10% Similarity=0.076 Sum_probs=46.1
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH---hcceeeeeecCCCCCCCCcccEEEEcccccccC
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH---KGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 79 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~---kG~VRvadikfpLPYR~KSFslVivSDaLdyLs 79 (171)
+||++|||++.+-..|++. ..+..|||..+- .-..++...+ +--+..+|+ ..+|+.. .++++|+||.-=+++
T Consensus 33 ~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~--~~~~a~~~~~~~~~v~~~~~D~-~~~~~~~-~~~~~vv~nlPy~~~ 107 (244)
T 1qam_A 33 NIFEIGSGKGHFTLELVQR-CNFVTAIEIDHK--LCKTTENKLVDHDNFQVLNKDI-LQFKFPK-NQSYKIFGNIPYNIS 107 (244)
T ss_dssp EEEEECCTTSHHHHHHHHH-SSEEEEECSCHH--HHHHHHHHTTTCCSEEEECCCG-GGCCCCS-SCCCEEEEECCGGGH
T ss_pred EEEEEeCCchHHHHHHHHc-CCeEEEEECCHH--HHHHHHHhhccCCCeEEEEChH-HhCCccc-CCCeEEEEeCCcccC
Confidence 6999999999998888854 578899987641 1122222221 223566787 4555543 223467777554444
Q ss_pred hhhhh
Q 030792 80 PKYLN 84 (171)
Q Consensus 80 prylN 84 (171)
..-+.
T Consensus 108 ~~~l~ 112 (244)
T 1qam_A 108 TDIIR 112 (244)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 43333
No 211
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=94.92 E-value=0.025 Score=47.28 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=86.8
Q ss_pred ccceeecCCc--hhHhHhhhhc--ccccccccccccccchhHHHHHHhHh---c--ceeeeeecCC---C--CCCCCccc
Q 030792 2 HKVLHVGPDT--CSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLVHK---G--IVRVADIKFP---L--PYRAKSFP 67 (171)
Q Consensus 2 ~kVLHvGP~t--C~vVs~llke--e~teAWGVEPyd~~d~d~~CksLv~k---G--~VRvadikfp---L--PYR~KSFs 67 (171)
+.||++|-|+ -+-+..+++. .+...-||+.+.. .-..++.++.. + -+..+|+.-+ | |-...+||
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~--mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPI--VLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHH--HHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChH--HHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 5799999886 4344444433 3567778776654 23456666643 2 2567888443 1 21135566
Q ss_pred -----EEEEcccccccChhh-hhchhhhhhhhcc-CceEEEe-cCCC----cchhhhhhhhhcCCCccccchhHHHHHHH
Q 030792 68 -----LVIVSDALDYLSPKY-LNKTLPDLARVAS-DGVLIFA-GYPG----QQRAKVAELSKFGRPAKMRSSSWWIRYFV 135 (171)
Q Consensus 68 -----lVivSDaLdyLspry-lNkTlPeLaRvs~-dgiVif~-g~pg----q~~ak~~elskfgr~ak~RsssWW~r~F~ 135 (171)
.|+..-+|-||.+.. ...+|.+|.++-+ .|.++++ ..+. ..++-......-|-|..+|+..=..+||.
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~rs~~ei~~~f~ 237 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEEFFE 237 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCCCCHHHHHHTTT
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCccCCHHHHHHHhC
Confidence 577778899998876 5789999998766 4555544 2222 22222334456788999999999999995
Q ss_pred Hhccc
Q 030792 136 QTSLE 140 (171)
Q Consensus 136 q~~le 140 (171)
|+|
T Consensus 238 --Gle 240 (277)
T 3giw_A 238 --GLE 240 (277)
T ss_dssp --TSE
T ss_pred --CCc
Confidence 877
No 212
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=94.79 E-value=0.061 Score=45.93 Aligned_cols=101 Identities=21% Similarity=0.258 Sum_probs=68.1
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHhcc---eeeeeecCCCCCCCCcccEEEEccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI---VRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~kG~---VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
.+||++|-|++.+-..|.+ ...+..|||..+ ++.+..|++. .|+ +..+|+. .++-. +||+||+ |
T Consensus 292 ~~VLDlgcG~G~~sl~la~-~~~~V~gvD~s~~ai~~A~~n~~~---ngl~v~~~~~d~~-~~~~~--~fD~Vv~-d--- 360 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAK-RGFNVKGFDSNEFAIEMARRNVEI---NNVDAEFEVASDR-EVSVK--GFDTVIV-D--- 360 (425)
T ss_dssp SEEEEETCTTTHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHH---HTCCEEEEECCTT-TCCCT--TCSEEEE-C---
T ss_pred CEEEEeeccchHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHH---cCCcEEEEECChH-HcCcc--CCCEEEE-c---
Confidence 3699999999998887775 467899999764 4556556543 343 5667874 33322 8999987 3
Q ss_pred ccChh--hhhchhhhhhhhccCceEEEecCCCcchhhhhhh
Q 030792 77 YLSPK--YLNKTLPDLARVASDGVLIFAGYPGQQRAKVAEL 115 (171)
Q Consensus 77 yLspr--ylNkTlPeLaRvs~dgiVif~g~pgq~~ak~~el 115 (171)
.|+ +-...+..|.++..+|+|+++..|...-.-++.|
T Consensus 361 --PPr~g~~~~~~~~l~~l~p~givyvsc~p~tlarDl~~l 399 (425)
T 2jjq_A 361 --PPRAGLHPRLVKRLNREKPGVIVYVSCNPETFARDVKML 399 (425)
T ss_dssp --CCTTCSCHHHHHHHHHHCCSEEEEEESCHHHHHHHHHHS
T ss_pred --CCccchHHHHHHHHHhcCCCcEEEEECChHHHHhHHhhC
Confidence 232 1224677778888999999998887653333333
No 213
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=94.72 E-value=0.038 Score=43.66 Aligned_cols=80 Identities=16% Similarity=0.168 Sum_probs=51.2
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHh---c--ceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK---G--IVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~k---G--~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
+||++|||++.+-..|++....+..|||..+ .+-...++ + -+..+|+ ..+|+.....+++|+++.--+
T Consensus 34 ~VLDiG~G~G~lt~~L~~~~~~~v~avEid~------~~~~~~~~~~~~~v~~i~~D~-~~~~~~~~~~~~~vv~NlPy~ 106 (249)
T 3ftd_A 34 TVVEVGGGTGNLTKVLLQHPLKKLYVIELDR------EMVENLKSIGDERLEVINEDA-SKFPFCSLGKELKVVGNLPYN 106 (249)
T ss_dssp EEEEEESCHHHHHHHHTTSCCSEEEEECCCH------HHHHHHTTSCCTTEEEECSCT-TTCCGGGSCSSEEEEEECCTT
T ss_pred EEEEEcCchHHHHHHHHHcCCCeEEEEECCH------HHHHHHHhccCCCeEEEEcch-hhCChhHccCCcEEEEECchh
Confidence 6999999999999999866457888888643 11112211 2 3556777 455554432256888887766
Q ss_pred cChhhhhchhhh
Q 030792 78 LSPKYLNKTLPD 89 (171)
Q Consensus 78 LsprylNkTlPe 89 (171)
++..-+-+.|-.
T Consensus 107 i~~~il~~ll~~ 118 (249)
T 3ftd_A 107 VASLIIENTVYN 118 (249)
T ss_dssp THHHHHHHHHHT
T ss_pred ccHHHHHHHHhc
Confidence 666666555543
No 214
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=94.70 E-value=0.37 Score=39.10 Aligned_cols=136 Identities=10% Similarity=0.109 Sum_probs=88.2
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhc---cee--eeeecCCCCCCCCcccEEEEccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG---IVR--VADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG---~VR--vadikfpLPYR~KSFslVivSDaLd 76 (171)
.+|||||-|++.....|++.-.. .-|+ -+|+..+-...+..+..+ .|+ .+|+ |..| .+.+|+|+.+.+|-
T Consensus 181 ~~v~DvGgG~G~~~~~l~~~~p~-~~~~-~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~-~~~~--~~~~D~~~~~~vlh 255 (353)
T 4a6d_A 181 PLMCDLGGGAGALAKECMSLYPG-CKIT-VFDIPEVVWTAKQHFSFQEEEQIDFQEGDF-FKDP--LPEADLYILARVLH 255 (353)
T ss_dssp SEEEEETCTTSHHHHHHHHHCSS-CEEE-EEECHHHHHHHHHHSCC--CCSEEEEESCT-TTSC--CCCCSEEEEESSGG
T ss_pred CeEEeeCCCCCHHHHHHHHhCCC-ceeE-eccCHHHHHHHHHhhhhcccCceeeecCcc-ccCC--CCCceEEEeeeecc
Confidence 47999999999999999865432 2232 455555545555544432 343 4676 4444 34689999999999
Q ss_pred ccChhhhhchhhhhhhhcc-CceEEEec--CCCcc----hhhhhhhhhc-CCCccccchhHHHHHHHHhccccc
Q 030792 77 YLSPKYLNKTLPDLARVAS-DGVLIFAG--YPGQQ----RAKVAELSKF-GRPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 77 yLsprylNkTlPeLaRvs~-dgiVif~g--~pgq~----~ak~~elskf-gr~ak~RsssWW~r~F~q~~leeN 142 (171)
+.+..+.-+.|-.+.|+-+ +|.|+..- .|... .+..-+|.=+ .-..|.|+..=|.+.|.++|++.-
T Consensus 256 ~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v 329 (353)
T 4a6d_A 256 DWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDF 329 (353)
T ss_dssp GSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEE
T ss_pred cCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceE
Confidence 9999998888998888654 56555543 33221 1222232211 113578999999999999998753
No 215
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=94.64 E-value=0.089 Score=42.10 Aligned_cols=69 Identities=17% Similarity=0.202 Sum_probs=46.7
Q ss_pred cceeecCCchhHhHhhhhcc-ccccccccccc--ccchhHHHHHHhHhcc-----eeeeeecCCCCCCCCcccEEEEccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee-~teAWGVEPyd--~~d~d~~CksLv~kG~-----VRvadikfpLPYR~KSFslVivSDa 74 (171)
+|||||.||+.+--.|.+.. ...++|||-.+ ++.+..|.+ +.|+ ++.+|.--++|-. ..||+|+++.+
T Consensus 18 ~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~---~~gl~~~i~~~~~d~l~~l~~~-~~~D~IviaG~ 93 (225)
T 3kr9_A 18 ILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVE---AHGLKEKIQVRLANGLAAFEET-DQVSVITIAGM 93 (225)
T ss_dssp EEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHH---HTTCTTTEEEEECSGGGGCCGG-GCCCEEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH---HcCCCceEEEEECchhhhcccC-cCCCEEEEcCC
Confidence 69999999999987777765 55788877653 333444444 3343 6778884466542 26999987665
Q ss_pred c
Q 030792 75 L 75 (171)
Q Consensus 75 L 75 (171)
-
T Consensus 94 G 94 (225)
T 3kr9_A 94 G 94 (225)
T ss_dssp C
T ss_pred C
Confidence 3
No 216
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=94.64 E-value=0.032 Score=44.61 Aligned_cols=98 Identities=18% Similarity=0.184 Sum_probs=59.4
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHh--Hh--cce-e--eeeecCCCCCCCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV--HK--GIV-R--VADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv--~k--G~V-R--vadikfpLPYR~KSFslVivSDa 74 (171)
.+|||+|-||++....|.+. .+..||+.++|-.. ..-+... .. ++. . .+|+ +.|| ..+||+|++ |.
T Consensus 76 ~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~m~~~-a~~~~~~~~~~~~~v~~~~~~~D~-~~l~--~~~fD~V~s-d~ 148 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASR--PHVMDVRAYTLGVG-GHEVPRITESYGWNIVKFKSRVDI-HTLP--VERTDVIMC-DV 148 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTS--TTEEEEEEECCCCS-SCCCCCCCCBTTGGGEEEECSCCT-TTSC--CCCCSEEEE-CC
T ss_pred CEEEEeCcCCCHHHHHHHHc--CcEEEEECchhhhh-hhhhhhhhhccCCCeEEEecccCH-hHCC--CCCCcEEEE-eC
Confidence 36999999999987767655 78999999987211 0000000 00 222 3 6788 5677 789999976 54
Q ss_pred ccccChhhh------hchhhhhhhh-ccCc--eEEEecC-CCc
Q 030792 75 LDYLSPKYL------NKTLPDLARV-ASDG--VLIFAGY-PGQ 107 (171)
Q Consensus 75 LdyLspryl------NkTlPeLaRv-s~dg--iVif~g~-pgq 107 (171)
. ++++.+. -+.|+++.|+ ...| .+++.-+ |..
T Consensus 149 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~ 190 (265)
T 2oxt_A 149 G-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYS 190 (265)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTS
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCC
Confidence 4 4443221 1278888775 4567 5655433 443
No 217
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=94.61 E-value=0.076 Score=43.25 Aligned_cols=68 Identities=15% Similarity=0.234 Sum_probs=44.0
Q ss_pred cceeecCCchhHhHhhhhcc-ccccccccccc--ccchhHHHHHHhHhc-----ceeeeeecCCCCCCCCcccEEEEccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKG-----IVRVADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee-~teAWGVEPyd--~~d~d~~CksLv~kG-----~VRvadikfpLPYR~KSFslVivSDa 74 (171)
+|||||.|++.+--.|.+.. ...++|||-.+ ++.+..|.+ +.| -++.+|.--++ .-..+||+|+++-+
T Consensus 24 ~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~---~~gl~~~I~v~~gD~l~~~-~~~~~~D~Iviagm 99 (244)
T 3gnl_A 24 RIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVR---SSGLTEQIDVRKGNGLAVI-EKKDAIDTIVIAGM 99 (244)
T ss_dssp EEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHH---HTTCTTTEEEEECSGGGGC-CGGGCCCEEEEEEE
T ss_pred EEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH---HcCCCceEEEEecchhhcc-CccccccEEEEeCC
Confidence 69999999999988887765 45678876553 333444433 334 36778873333 22336999986643
No 218
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=94.59 E-value=0.028 Score=45.68 Aligned_cols=83 Identities=14% Similarity=0.161 Sum_probs=54.2
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhc--ceeeeeecCCCCCCCCcccEEEEcccccccCh
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 80 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG--~VRvadikfpLPYR~KSFslVivSDaLdyLsp 80 (171)
+||+||||++.+-..|++. +.+..|||..+- .-..++.-...+ -+..+|+ ..+++.......+|+|+.-=|++.
T Consensus 49 ~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~--~~~~l~~~~~~~~v~vi~~D~-l~~~~~~~~~~~~iv~NlPy~iss 124 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEA-GAEVTAIEKDLR--LRPVLEETLSGLPVRLVFQDA-LLYPWEEVPQGSLLVANLPYHIAT 124 (271)
T ss_dssp CEEEECCTTSHHHHHHHHT-TCCEEEEESCGG--GHHHHHHHTTTSSEEEEESCG-GGSCGGGSCTTEEEEEEECSSCCH
T ss_pred eEEEEeCchHHHHHHHHHc-CCEEEEEECCHH--HHHHHHHhcCCCCEEEEECCh-hhCChhhccCccEEEecCcccccH
Confidence 5999999999999888855 578899986532 112222222222 3556787 445554332235688888888888
Q ss_pred hhhhchhhh
Q 030792 81 KYLNKTLPD 89 (171)
Q Consensus 81 rylNkTlPe 89 (171)
.-+-+-|..
T Consensus 125 ~il~~ll~~ 133 (271)
T 3fut_A 125 PLVTRLLKT 133 (271)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcC
Confidence 777777765
No 219
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=94.47 E-value=0.024 Score=43.78 Aligned_cols=101 Identities=12% Similarity=0.174 Sum_probs=61.8
Q ss_pred ccceeecCCchhHhHhhhhc--cccccccccccc--ccchhHHHHHHhHhc--ceeeeeecCCCCCC-----CCcccEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYR-----AKSFPLVI 70 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke--e~teAWGVEPyd--~~d~d~~CksLv~kG--~VRvadikfpLPYR-----~KSFslVi 70 (171)
++||++|.|++.....|.+. .+.+..|||..+ ++-+..+++..=-.. -+.++|..-.+|.- ..+||+|+
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~ 141 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIF 141 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEE
Confidence 47999999999988877753 467899998765 455666665432222 24567764445542 57999998
Q ss_pred EcccccccChhhhhchhhhhhhh-ccCceEEEe--cCCCc
Q 030792 71 VSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA--GYPGQ 107 (171)
Q Consensus 71 vSDaLdyLsprylNkTlPeLaRv-s~dgiVif~--g~pgq 107 (171)
+.-. .+.| -..+.++.|+ ...|++++- -++|.
T Consensus 142 ~d~~----~~~~-~~~l~~~~~~LkpGG~lv~d~~~~~g~ 176 (242)
T 3r3h_A 142 IDAD----KTNY-LNYYELALKLVTPKGLIAIDNIFWDGK 176 (242)
T ss_dssp EESC----GGGH-HHHHHHHHHHEEEEEEEEEECSSSSSC
T ss_pred EcCC----hHHh-HHHHHHHHHhcCCCeEEEEECCccCCc
Confidence 6422 1222 2245555554 456777763 24443
No 220
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=94.30 E-value=0.054 Score=45.32 Aligned_cols=101 Identities=13% Similarity=0.196 Sum_probs=59.4
Q ss_pred ccceeecCCchhHhHhhhhccc-cccccccccc--ccchhHHHHHHhHhcceeeeeecCCCC--CCCCcccEEEE-----
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLP--YRAKSFPLVIV----- 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~-teAWGVEPyd--~~d~d~~CksLv~kG~VRvadikfpLP--YR~KSFslViv----- 71 (171)
.+||++|.|+++....|.+... .+..|+|.+. ++.+..+++.+=-.-.+..+|.. .+| +...+||+|++
T Consensus 248 ~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~-~~~~~~~~~~fD~Vl~D~Pcs 326 (429)
T 1sqg_A 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR-YPSQWCGEQQFDRILLDAPCS 326 (429)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTT-CTHHHHTTCCEEEEEEECCCC
T ss_pred CeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchh-hchhhcccCCCCEEEEeCCCC
Confidence 3799999999998888876543 6788888765 34444444432111235566763 333 45578999996
Q ss_pred -cccccc-------cChhhh-------hchhhhhhhh-ccCceEEEec
Q 030792 72 -SDALDY-------LSPKYL-------NKTLPDLARV-ASDGVLIFAG 103 (171)
Q Consensus 72 -SDaLdy-------Lspryl-------NkTlPeLaRv-s~dgiVif~g 103 (171)
+.++.. .+|+.+ .+.|.+..++ ...|.++++.
T Consensus 327 g~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 327 ATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp CGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 222222 233333 2445556664 4567777754
No 221
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=94.22 E-value=0.012 Score=44.94 Aligned_cols=66 Identities=17% Similarity=0.263 Sum_probs=43.8
Q ss_pred cceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHhcceeeeeecCCCCCCC-CcccEEEEcc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRA-KSFPLVIVSD 73 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~kG~VRvadikfpLPYR~-KSFslVivSD 73 (171)
+||++|+|++.+...|.+. +.+..|||..+ ++-+..+++ ...+--+..+|+ ..+|+.. .+| +|+||
T Consensus 32 ~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~-~~~~~~~~~~f--~vv~n 100 (245)
T 1yub_A 32 TVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDI-LQFQFPNKQRY--KIVGN 100 (245)
T ss_dssp EEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCC-TTTTCCCSSEE--EEEEE
T ss_pred EEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhc-cCCceEEEECCh-hhcCcccCCCc--EEEEe
Confidence 6999999999998888855 58899999764 333444443 112223556887 5666653 678 45555
No 222
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=94.21 E-value=0.13 Score=43.45 Aligned_cols=97 Identities=16% Similarity=0.254 Sum_probs=58.1
Q ss_pred cceeecCCchhHhHhhhhc--cccccccccccc--ccchhHHHHHHhHhcc----eeeeeecCCCC--CCCCcccEEEE-
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI----VRVADIKFPLP--YRAKSFPLVIV- 71 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd--~~d~d~~CksLv~kG~----VRvadikfpLP--YR~KSFslViv- 71 (171)
+||++|.|+++.-..|.+. ......|+|.++ ++.+..+++ +.|+ +..+|.. .+| +...+||+|++
T Consensus 262 ~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~---~~g~~~v~~~~~D~~-~~~~~~~~~~fD~Vl~D 337 (450)
T 2yxl_A 262 TVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVK---RMGIKIVKPLVKDAR-KAPEIIGEEVADKVLLD 337 (450)
T ss_dssp EEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHH---HTTCCSEEEECSCTT-CCSSSSCSSCEEEEEEE
T ss_pred EEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHH---HcCCCcEEEEEcChh-hcchhhccCCCCEEEEc
Confidence 6999999999888877753 236788888765 333334433 3354 3446663 334 55578999995
Q ss_pred -----ccccc-------ccChhhh-------hchhhhhhhh-ccCceEEEec
Q 030792 72 -----SDALD-------YLSPKYL-------NKTLPDLARV-ASDGVLIFAG 103 (171)
Q Consensus 72 -----SDaLd-------yLspryl-------NkTlPeLaRv-s~dgiVif~g 103 (171)
+.++. ..+|+.+ -+.|-++.|+ ...|.++++.
T Consensus 338 ~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 338 APCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp CCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 22222 2344333 3446666665 4457777654
No 223
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=94.12 E-value=0.057 Score=42.08 Aligned_cols=96 Identities=16% Similarity=0.021 Sum_probs=56.0
Q ss_pred ccceeecCCchhHhHhhhhc-ccccccccccccc--cchhHHHHHHhHhc-ceeeeeecCCCCCC---CCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDI--EDADARCKSLVHKG-IVRVADIKFPLPYR---AKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e~teAWGVEPyd~--~d~d~~CksLv~kG-~VRvadikfpLPYR---~KSFslVivSDa 74 (171)
.+|||||.||+.+--.|.+. .+.+..|||+.+- +-+..+++.+=-.. -+..+|+ ..+|.. ..+||+|++..+
T Consensus 82 ~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~-~~~~~~~~~~~~fD~I~s~a~ 160 (249)
T 3g89_A 82 LRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRA-EVLAREAGHREAYARAVARAV 160 (249)
T ss_dssp CEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCH-HHHTTSTTTTTCEEEEEEESS
T ss_pred CEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcH-HHhhcccccCCCceEEEECCc
Confidence 36999999999775555544 4678899998763 33555555542122 1334565 334432 368999987533
Q ss_pred ccccChhhhhchhhhhhhhc-cCceEEE-ecC
Q 030792 75 LDYLSPKYLNKTLPDLARVA-SDGVLIF-AGY 104 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRvs-~dgiVif-~g~ 104 (171)
-+ +...+.++.|+- .+|.+++ .|.
T Consensus 161 ~~------~~~ll~~~~~~LkpgG~l~~~~g~ 186 (249)
T 3g89_A 161 AP------LCVLSELLLPFLEVGGAAVAMKGP 186 (249)
T ss_dssp CC------HHHHHHHHGGGEEEEEEEEEEECS
T ss_pred CC------HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 21 344555555543 5665544 553
No 224
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=94.01 E-value=0.066 Score=44.13 Aligned_cols=88 Identities=16% Similarity=0.164 Sum_probs=51.6
Q ss_pred cceeecC------Cchh-HhHhhhhcccccccccccccccchhHHHHHHhHhcce-eeeeecCCCCCCCCcccEEEEccc
Q 030792 3 KVLHVGP------DTCS-VVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIV-RVADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 3 kVLHvGP------~tC~-vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~V-RvadikfpLPYR~KSFslVivSDa 74 (171)
+|||+|- |+++ +.++++ ..+....||+..+. +..=.+ ..+|+ +.+|+. .+||+|++ |.
T Consensus 66 ~VLDLGcGsg~~~GpGs~~~a~~~-~~~~~V~gvDis~~----------v~~v~~~i~gD~-~~~~~~-~~fD~Vvs-n~ 131 (290)
T 2xyq_A 66 RVIHFGAGSDKGVAPGTAVLRQWL-PTGTLLVDSDLNDF----------VSDADSTLIGDC-ATVHTA-NKWDLIIS-DM 131 (290)
T ss_dssp EEEEESCCCTTSBCHHHHHHHHHS-CTTCEEEEEESSCC----------BCSSSEEEESCG-GGCCCS-SCEEEEEE-CC
T ss_pred EEEEeCCCCCCCCCcHHHHHHHHc-CCCCEEEEEECCCC----------CCCCEEEEECcc-ccCCcc-CcccEEEE-cC
Confidence 6999999 3344 333333 23567899988876 121124 56888 455554 68999985 43
Q ss_pred c---------cccChh-hhhchhhhhhhhc-cCceEEEecC
Q 030792 75 L---------DYLSPK-YLNKTLPDLARVA-SDGVLIFAGY 104 (171)
Q Consensus 75 L---------dyLspr-ylNkTlPeLaRvs-~dgiVif~g~ 104 (171)
. |+.... .+...+.+..|+- ..|.+++.-+
T Consensus 132 ~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 132 YDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp CCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 2 222211 2235677777765 4567776443
No 225
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=93.94 E-value=0.075 Score=40.11 Aligned_cols=94 Identities=14% Similarity=0.154 Sum_probs=54.1
Q ss_pred ccceeecCCchhHhHhhhhcc--cccccccccccccchhHHHHHHh-Hhcc-----eeeeeecC---CCCCCC--CcccE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYDIEDADARCKSLV-HKGI-----VRVADIKF---PLPYRA--KSFPL 68 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee--~teAWGVEPyd~~d~d~~CksLv-~kG~-----VRvadikf---pLPYR~--KSFsl 68 (171)
.+||++|.|++.....|.+.- +.+..|||+.+- .-..++... +.|+ +.++|..- .+|... .+||+
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~--~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPN--ATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHH--HHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHH--HHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 479999999999888887642 568899987652 122233322 2232 34566421 233333 78999
Q ss_pred EEEcccccccChhhhhchhhhhhhh-ccCceEEEe
Q 030792 69 VIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 102 (171)
Q Consensus 69 VivSDaLdyLsprylNkTlPeLaRv-s~dgiVif~ 102 (171)
|++. +- .......+.++.|+ ...|++++.
T Consensus 152 V~~d-~~----~~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 152 IFID-AD----KRNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp EEEC-SC----GGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEC-CC----HHHHHHHHHHHHHHcCCCeEEEEe
Confidence 9853 32 12223345555554 456677664
No 226
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=93.84 E-value=0.06 Score=45.24 Aligned_cols=100 Identities=11% Similarity=0.115 Sum_probs=60.1
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccc--cccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 79 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPy--d~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLs 79 (171)
.+|||+|-|+.-.--.+. .....+|++-. -|+=+..++..+=-...++++|. ...|.-. +||+|++.+++.+|.
T Consensus 107 ~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~-~~~~~~~-~~DvvLllk~lh~LE 182 (253)
T 3frh_A 107 RRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDV-LCAPPAE-AGDLALIFKLLPLLE 182 (253)
T ss_dssp SEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCT-TTSCCCC-BCSEEEEESCHHHHH
T ss_pred CeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeec-ccCCCCC-CcchHHHHHHHHHhh
Confidence 479999999876655544 55555554221 12222333222222344688898 4445444 899999998888875
Q ss_pred hhhhhchhhhhhhhccCceEEEecCCCc
Q 030792 80 PKYLNKTLPDLARVASDGVLIFAGYPGQ 107 (171)
Q Consensus 80 prylNkTlPeLaRvs~dgiVif~g~pgq 107 (171)
..+=-.-+-=|.|+.+.+|||. +|.+
T Consensus 183 ~q~~~~~~~ll~aL~~~~vvVs--fPtk 208 (253)
T 3frh_A 183 REQAGSAMALLQSLNTPRMAVS--FPTR 208 (253)
T ss_dssp HHSTTHHHHHHHHCBCSEEEEE--EECC
T ss_pred hhchhhHHHHHHHhcCCCEEEE--cChH
Confidence 5443333344568899987764 5633
No 227
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=93.79 E-value=0.12 Score=38.68 Aligned_cols=70 Identities=11% Similarity=0.025 Sum_probs=43.0
Q ss_pred cceeecCCchhHhHhhhhcc-ccccccccccc--ccchhHHHHHHhHhc--ceeeeeecC----CCCCC-CCcccEEEEc
Q 030792 3 KVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKF----PLPYR-AKSFPLVIVS 72 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee-~teAWGVEPyd--~~d~d~~CksLv~kG--~VRvadikf----pLPYR-~KSFslVivS 72 (171)
+||++|.||+.+...|.+.. +.+..|||..+ ++-+..+++..--.+ -+..+|+.- ++|-. ..+||+|++.
T Consensus 68 ~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~n 147 (254)
T 2h00_A 68 RGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCN 147 (254)
T ss_dssp EEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEEC
T ss_pred EEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEEC
Confidence 69999999998887777543 57889998754 333444444321111 234556431 34332 2689999875
No 228
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=93.78 E-value=0.027 Score=44.99 Aligned_cols=82 Identities=16% Similarity=0.143 Sum_probs=50.7
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH---hcceeeeeecCCCCCCC----CcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH---KGIVRVADIKFPLPYRA----KSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~---kG~VRvadikfpLPYR~----KSFslVivSDa 74 (171)
.+||++|||++.+-..|++. ..+..|||..+- .-..++.... +=-+..+|+ ..+|+.. ++|+ |+++.
T Consensus 31 ~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~--~~~~~~~~~~~~~~v~~i~~D~-~~~~~~~~~~~~~~~--vv~Nl 104 (255)
T 3tqs_A 31 DTLVEIGPGRGALTDYLLTE-CDNLALVEIDRD--LVAFLQKKYNQQKNITIYQNDA-LQFDFSSVKTDKPLR--VVGNL 104 (255)
T ss_dssp CEEEEECCTTTTTHHHHTTT-SSEEEEEECCHH--HHHHHHHHHTTCTTEEEEESCT-TTCCGGGSCCSSCEE--EEEEC
T ss_pred CEEEEEcccccHHHHHHHHh-CCEEEEEECCHH--HHHHHHHHHhhCCCcEEEEcch-HhCCHHHhccCCCeE--EEecC
Confidence 36999999999998888854 578899886531 1122222222 123556787 5555543 4566 77876
Q ss_pred ccccChhhhhchhhh
Q 030792 75 LDYLSPKYLNKTLPD 89 (171)
Q Consensus 75 LdyLsprylNkTlPe 89 (171)
==|++..-|-+.|..
T Consensus 105 PY~is~~il~~ll~~ 119 (255)
T 3tqs_A 105 PYNISTPLLFHLFSQ 119 (255)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHhC
Confidence 656665555555543
No 229
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=93.76 E-value=0.1 Score=44.66 Aligned_cols=126 Identities=12% Similarity=-0.011 Sum_probs=78.8
Q ss_pred ccceeecCCchhHhHhhhhc-ccccccccccc--cccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPY--DIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e~teAWGVEPy--d~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
.+|||+|-|+.-+--.+..+ .....||++-. -++=+..++..+=-.+.+++.|.--+.| +-.||+|++.+++.+|
T Consensus 134 ~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p--~~~~DvaL~lkti~~L 211 (281)
T 3lcv_B 134 NTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRL--DEPADVTLLLKTLPCL 211 (281)
T ss_dssp SEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCC--CSCCSEEEETTCHHHH
T ss_pred ceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCC--CCCcchHHHHHHHHHh
Confidence 47999999998777666666 56677776432 2233445554443346688888755544 6679999999999999
Q ss_pred ChhhhhchhhhhhhhccCceEEEecCCCcchhhhhhhhhcCCCccc--cchhHHHHHHHHhcc
Q 030792 79 SPKYLNKTLPDLARVASDGVLIFAGYPGQQRAKVAELSKFGRPAKM--RSSSWWIRYFVQTSL 139 (171)
Q Consensus 79 sprylNkTlPeLaRvs~dgiVif~g~pgq~~ak~~elskfgr~ak~--RsssWW~r~F~q~~l 139 (171)
....=-.-+-=+.++.+.||||..-. +- =-||..-| .-+.||.+.....|.
T Consensus 212 e~q~kg~g~~ll~aL~~~~vvVSfp~--ks--------l~Grs~gm~~~Y~~~~e~~~~~~g~ 264 (281)
T 3lcv_B 212 ETQQRGSGWEVIDIVNSPNIVVTFPT--KS--------LGQRSKGMFQNYSQSFESQARERSC 264 (281)
T ss_dssp HHHSTTHHHHHHHHSSCSEEEEEEEC--C---------------CHHHHHHHHHHHHHHHHTC
T ss_pred hhhhhHHHHHHHHHhCCCCEEEeccc--hh--------hcCCCcchhhHHHHHHHHHHHhcCC
Confidence 77643333434567888988776433 11 12333333 346788887766554
No 230
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=93.34 E-value=0.19 Score=40.46 Aligned_cols=98 Identities=18% Similarity=0.114 Sum_probs=54.6
Q ss_pred cceeecCCchhHhHhhhhcc-ccccccccccc--ccchhHHHHHHhH--hcceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee-~teAWGVEPyd--~~d~d~~CksLv~--kG~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
+|||||.|++.+--.|.+.. ...++++|-.+ ++.+..|.+..=- +=-++.+|.--++ .-...||+|+++-+.-.
T Consensus 24 ~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~-~~~~~~D~IviaGmGg~ 102 (230)
T 3lec_A 24 RLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAF-EEADNIDTITICGMGGR 102 (230)
T ss_dssp EEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC-CGGGCCCEEEEEEECHH
T ss_pred EEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcc-ccccccCEEEEeCCchH
Confidence 69999999999888887765 45677776553 3334444433211 1135678873333 32337999987655433
Q ss_pred cChhhhhchhhhhhhhccCceEEEecC
Q 030792 78 LSPKYLNKTLPDLARVASDGVLIFAGY 104 (171)
Q Consensus 78 LsprylNkTlPeLaRvs~dgiVif~g~ 104 (171)
+--+-|.... .++...+.+|..+.
T Consensus 103 lI~~IL~~~~---~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 103 LIADILNNDI---DKLQHVKTLVLQPN 126 (230)
T ss_dssp HHHHHHHHTG---GGGTTCCEEEEEES
T ss_pred HHHHHHHHHH---HHhCcCCEEEEECC
Confidence 2222222221 12334555555554
No 231
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=93.28 E-value=0.21 Score=38.17 Aligned_cols=135 Identities=17% Similarity=0.224 Sum_probs=65.4
Q ss_pred ccceeecCCchhHhHhhhh-ccccccccccccccc--c-hhHHHHHHhHhcc----eeeeeecCCCCCC-CCcccEEEEc
Q 030792 2 HKVLHVGPDTCSVVSTLLK-EEETEAWGVEPYDIE--D-ADARCKSLVHKGI----VRVADIKFPLPYR-AKSFPLVIVS 72 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llk-ee~teAWGVEPyd~~--d-~d~~CksLv~kG~----VRvadikfpLPYR-~KSFslVivS 72 (171)
.+|||+|-|++.....|.+ ..+.+..||++++-. + +..-.+...+.|+ .+.+|+ ..||.. ...|+.|.+.
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~-~~l~~~~~d~v~~i~~~ 104 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAA-ESLPFELKNIADSISIL 104 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBT-TBCCGGGTTCEEEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCH-HHhhhhccCeEEEEEEe
Confidence 3699999999999888874 456678999998322 1 1111112223343 355676 455632 1444444432
Q ss_pred ccccccCh---hhhhchhhhhhhhcc-CceEEEecCCCcchhhhhhhhhcCCCccccchhH-----HHHHHHHhccc
Q 030792 73 DALDYLSP---KYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSW-----WIRYFVQTSLE 140 (171)
Q Consensus 73 DaLdyLsp---rylNkTlPeLaRvs~-dgiVif~g~pgq~~ak~~elskfgr~ak~RsssW-----W~r~F~q~~le 140 (171)
=....+.. ...-..|.++.|+-+ +|.++++---+..+.. .++...+.| ..+..| +.+.+.++|++
T Consensus 105 ~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~el~~~l~~aGf~ 178 (225)
T 3p2e_A 105 FPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEE-AEIKKRGLP--LLSKAYFLSEQYKAELSNSGFR 178 (225)
T ss_dssp SCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC-----------------CCHHHHHSHHHHHHHHHHTCE
T ss_pred CCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchh-chhhhcCCC--CCChhhcchHHHHHHHHHcCCC
Confidence 11111100 001246778888755 4666552211111111 111112222 223455 77788888886
No 232
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=93.14 E-value=0.046 Score=47.61 Aligned_cols=116 Identities=17% Similarity=0.154 Sum_probs=70.1
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHh-Hhcc----eeeeeecCCC--CCCCCcccEEEEcccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV-HKGI----VRVADIKFPL--PYRAKSFPLVIVSDAL 75 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv-~kG~----VRvadikfpL--PYR~KSFslVivSDaL 75 (171)
+|||||=|++..-..|- ..+-+.-||++.+-- =..|+..- +.|. .|++|+ -.| ++.+.+||+|+...+|
T Consensus 69 ~vLDvGCG~G~~~~~la-~~ga~V~giD~~~~~--i~~a~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 69 NVLDLGCAQGFFSLSLA-SKGATIVGIDFQQEN--INVCRALAEENPDFAAEFRVGRI-EEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp EEEEETCTTSHHHHHHH-HTTCEEEEEESCHHH--HHHHHHHHHTSTTSEEEEEECCH-HHHHHHCCTTSCSEEEEESCH
T ss_pred eEEEECCCCcHHHHHHH-hCCCEEEEECCCHHH--HHHHHHHHHhcCCCceEEEECCH-HHHhhhccCCCccEEEECcch
Confidence 79999999987555555 668899999987632 23344433 3453 345555 233 5678899999999999
Q ss_pred cccChh----hhhchhhhhhhhccCceEEEec--CCCcch-hhhhhhhhcCCCc
Q 030792 76 DYLSPK----YLNKTLPDLARVASDGVLIFAG--YPGQQR-AKVAELSKFGRPA 122 (171)
Q Consensus 76 dyLspr----ylNkTlPeLaRvs~dgiVif~g--~pgq~~-ak~~elskfgr~a 122 (171)
+|+..- .+-+.+..|.|-..-.+..++| |+-.-- .--++-.||-+|.
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e~~~~~~p~~~~~~~~~i~~~ 198 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVILELAVKEEPFYWGVSQPDDPRELIEQC 198 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTTSSSGGGGGSCSSGGGGTTTS
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeEEeccccccccccCCCCccHHHhcCHH
Confidence 999632 2223444455554445555554 332111 1124556666664
No 233
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=93.10 E-value=0.22 Score=40.02 Aligned_cols=95 Identities=11% Similarity=0.027 Sum_probs=58.4
Q ss_pred ccceeecCCchhHhHhhhhcc--ccccccccccc--ccchhHHHHHHhHhc----ceeeeeecCCCCCCCCcccEEEEc-
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKG----IVRVADIKFPLPYRAKSFPLVIVS- 72 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee--~teAWGVEPyd--~~d~d~~CksLv~kG----~VRvadikfpLPYR~KSFslVivS- 72 (171)
..|||+|-|++.+...+.... +....|+|... ++-+..| +-+.| -+.++|+ ..+|....+||+||+-
T Consensus 205 ~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n---~~~~g~~~i~~~~~D~-~~~~~~~~~~D~Ii~np 280 (354)
T 3tma_A 205 MRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREA---ALASGLSWIRFLRADA-RHLPRFFPEVDRILANP 280 (354)
T ss_dssp CCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHH---HHHTTCTTCEEEECCG-GGGGGTCCCCSEEEECC
T ss_pred CEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHH---HHHcCCCceEEEeCCh-hhCccccCCCCEEEECC
Confidence 369999999999988877543 47888988754 2323333 33445 3567888 5667667789998861
Q ss_pred -------ccccccChhhhhchhhhhhhhcc-CceEEEe
Q 030792 73 -------DALDYLSPKYLNKTLPDLARVAS-DGVLIFA 102 (171)
Q Consensus 73 -------DaLdyLsprylNkTlPeLaRvs~-dgiVif~ 102 (171)
+..+. .......+-++.|+-+ .|.++++
T Consensus 281 Pyg~r~~~~~~~--~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 281 PHGLRLGRKEGL--FHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp CSCC----CHHH--HHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred CCcCccCCcccH--HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 11110 1112456667788763 4554443
No 234
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=93.04 E-value=0.11 Score=37.97 Aligned_cols=95 Identities=17% Similarity=0.116 Sum_probs=53.9
Q ss_pred ccceeecCCchhHhHhhhhc--ccccccccccccccchhHHHHHHh-Hhcc-----eeeeeecCCCC-CC----CCcccE
Q 030792 2 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLV-HKGI-----VRVADIKFPLP-YR----AKSFPL 68 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke--e~teAWGVEPyd~~d~d~~CksLv-~kG~-----VRvadikfpLP-YR----~KSFsl 68 (171)
.+||++|.|++.....|.+. .+.+..|||+.+- .-..++..+ +.|+ +..+|+.-.+| .. ..+||+
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~--~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADGRVVTCEVDAQ--PPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSH--HHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHH--HHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 47999999999888888764 2678899987652 222333333 2232 34456522222 11 168999
Q ss_pred EEEcccccccChhhhhchhhhhhhh-ccCceEEEec
Q 030792 69 VIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG 103 (171)
Q Consensus 69 VivSDaLdyLsprylNkTlPeLaRv-s~dgiVif~g 103 (171)
|+. |+- .......+.++.|+ ..+|++++..
T Consensus 149 v~~-d~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 149 AVV-DAD----KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEE-CSC----STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEE-CCC----HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 987 332 11222345555554 4566776643
No 235
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=92.98 E-value=0.033 Score=49.52 Aligned_cols=91 Identities=14% Similarity=0.141 Sum_probs=61.8
Q ss_pred ccceeecCC------chhHhHhhhhc--ccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCC------CCccc
Q 030792 2 HKVLHVGPD------TCSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYR------AKSFP 67 (171)
Q Consensus 2 ~kVLHvGP~------tC~vVs~llke--e~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR------~KSFs 67 (171)
.+||++|-| |.+.-..|+++ .+.+..||+.++.- . ..-.+=-+.++|+ ..+|+- ..+||
T Consensus 218 ~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m-~-----~~~~rI~fv~GDa-~dlpf~~~l~~~d~sFD 290 (419)
T 3sso_A 218 VRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS-H-----VDELRIRTIQGDQ-NDAEFLDRIARRYGPFD 290 (419)
T ss_dssp CEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG-G-----GCBTTEEEEECCT-TCHHHHHHHHHHHCCEE
T ss_pred CEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH-h-----hcCCCcEEEEecc-cccchhhhhhcccCCcc
Confidence 379999999 66766677765 46789999987753 1 1111223567888 677776 68999
Q ss_pred EEEEcccccccChhhhhchhhhhhhhccC-ceEEEe
Q 030792 68 LVIVSDALDYLSPKYLNKTLPDLARVASD-GVLIFA 102 (171)
Q Consensus 68 lVivSDaLdyLsprylNkTlPeLaRvs~d-giVif~ 102 (171)
+|| ||..-+ ....-++|.++.|+-+. |++|+.
T Consensus 291 lVi-sdgsH~--~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 291 IVI-DDGSHI--NAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp EEE-ECSCCC--HHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEE-ECCccc--chhHHHHHHHHHHhcCCCeEEEEE
Confidence 997 566533 23456789999987654 566664
No 236
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=92.42 E-value=0.084 Score=39.42 Aligned_cols=33 Identities=12% Similarity=0.214 Sum_probs=28.1
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIE 35 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~ 35 (171)
.+|||+|.|+++.-..|.+. +....||+..++.
T Consensus 27 ~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~ 59 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME 59 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC
T ss_pred CEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc
Confidence 37999999999988777755 8899999998874
No 237
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=92.27 E-value=0.12 Score=47.06 Aligned_cols=118 Identities=18% Similarity=0.139 Sum_probs=67.8
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHh-H--hcceeeeeecCCCCCCCCcccEEEEccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-H--KGIVRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv-~--kG~VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
.+||++|-|||+.--.+++....+..|||.++ ++-+..|++..= . +--+..+|+--.||....+||+||+ |.=-
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~-DPP~ 619 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFI-DPPT 619 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEE-CCCS
T ss_pred CcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEE-CCcc
Confidence 47999999999987777766556688888765 333445544321 0 1124567874447776789999885 2211
Q ss_pred ccC----------hhhhhchhhhhhh-hccCceEEEecCCCcchhhhhhhhhcCC
Q 030792 77 YLS----------PKYLNKTLPDLAR-VASDGVLIFAGYPGQQRAKVAELSKFGR 120 (171)
Q Consensus 77 yLs----------prylNkTlPeLaR-vs~dgiVif~g~pgq~~ak~~elskfgr 120 (171)
+-. -+..-+.+.+..| +..+|+++++..+.+.......+.++|.
T Consensus 620 f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~ 674 (703)
T 3v97_A 620 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGL 674 (703)
T ss_dssp BC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTE
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCC
Confidence 000 0111122333334 4567888877766554444455555553
No 238
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=92.23 E-value=0.087 Score=46.26 Aligned_cols=97 Identities=16% Similarity=0.173 Sum_probs=61.2
Q ss_pred cceeecCCchhHhHhhhhc--cccccccccccc--ccchhHHHHHHhHhcc---eeeeeecCCCCCCCCcccEEEE----
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI---VRVADIKFPLPYRAKSFPLVIV---- 71 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd--~~d~d~~CksLv~kG~---VRvadikfpLPYR~KSFslViv---- 71 (171)
+|||+|-|+++.-..|.+. ......|+|.++ ++-+..|++ +.|+ +..+|..-..++-..+||+|++
T Consensus 104 ~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~---r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~Pc 180 (464)
T 3m6w_A 104 RVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVE---RWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPC 180 (464)
T ss_dssp EEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHH---HHCCCCEEECSCHHHHHHHHCSCEEEEEEECCC
T ss_pred EEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH---HcCCeEEEEECCHHHhhhhccccCCEEEECCCc
Confidence 6999999999887777654 335788887664 333444443 3453 4456653222244678999996
Q ss_pred ---------cccccccChhhh-------hchhhhhhhh-ccCceEEEe
Q 030792 72 ---------SDALDYLSPKYL-------NKTLPDLARV-ASDGVLIFA 102 (171)
Q Consensus 72 ---------SDaLdyLspryl-------NkTlPeLaRv-s~dgiVif~ 102 (171)
.|+....+|+.+ -+.|.+..|+ ...|+++++
T Consensus 181 Sg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~Lvys 228 (464)
T 3m6w_A 181 SGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYS 228 (464)
T ss_dssp CCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 566666777666 3455566655 446787774
No 239
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=91.90 E-value=0.086 Score=42.95 Aligned_cols=118 Identities=14% Similarity=0.152 Sum_probs=70.4
Q ss_pred ccceeecCCchhHhHhhhhcc-ccccccccccc--ccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd--~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
.+||++|-|+..+--.+..+. ..+.|+++-.+ ++=+..++..+=-.+-||++|.--.. -+.+||+|++-++|-+|
T Consensus 51 ~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~--~~~~~DvVLa~k~LHlL 128 (200)
T 3fzg_A 51 SSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDV--YKGTYDVVFLLKMLPVL 128 (200)
T ss_dssp SEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHH--TTSEEEEEEEETCHHHH
T ss_pred CeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccC--CCCCcChhhHhhHHHhh
Confidence 379999999998877776442 44666654322 22233333322222368888885443 35679999999999999
Q ss_pred Chhhhhchhhhhh-hhccCceEEEecCCCcchhhhhhhhhcCCCccc--cchhHHHHH
Q 030792 79 SPKYLNKTLPDLA-RVASDGVLIFAGYPGQQRAKVAELSKFGRPAKM--RSSSWWIRY 133 (171)
Q Consensus 79 sprylNkTlPeLa-Rvs~dgiVif~g~pgq~~ak~~elskfgr~ak~--RsssWW~r~ 133 (171)
++.-.++=++. ++-..|+ |+++|.++ | -||..-| +-+.||.++
T Consensus 129 --~~~~~al~~v~~~L~pggv--fISfptks------l--~Gr~~gm~~~Y~~~~~~~ 174 (200)
T 3fzg_A 129 --KQQDVNILDFLQLFHTQNF--VISFPIKS------L--SGKEKGMEENYQLWFESF 174 (200)
T ss_dssp --HHTTCCHHHHHHTCEEEEE--EEEEECCC------C--C--CTTCCCCHHHHHHHH
T ss_pred --hhhHHHHHHHHHHhCCCCE--EEEeChHH------h--cCCCcchhhhHHHHHHHh
Confidence 66666665554 4555655 45677443 1 2343333 345666654
No 240
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=91.86 E-value=0.22 Score=42.56 Aligned_cols=92 Identities=24% Similarity=0.370 Sum_probs=51.5
Q ss_pred ccceeecCCchhHhHhhhhcc-cccccccccccccchhHHHHHHhHh-c---ceee--eee-cCCCCCCCCcccEEEEcc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHK-G---IVRV--ADI-KFPLPYRAKSFPLVIVSD 73 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee-~teAWGVEPyd~~d~d~~CksLv~k-G---~VRv--adi-kfpLPYR~KSFslVivSD 73 (171)
+.||+||-||+ +.|-+...- -....|||.++|- ..++..+++ | .|.+ +|+ .+.|| ..||+| +|+
T Consensus 85 k~VLDvG~GtG-iLs~~Aa~aGA~~V~ave~s~~~---~~a~~~~~~n~~~~~i~~i~~~~~~~~lp---e~~Dvi-vsE 156 (376)
T 4hc4_A 85 KTVLDVGAGTG-ILSIFCAQAGARRVYAVEASAIW---QQAREVVRFNGLEDRVHVLPGPVETVELP---EQVDAI-VSE 156 (376)
T ss_dssp CEEEEETCTTS-HHHHHHHHTTCSEEEEEECSTTH---HHHHHHHHHTTCTTTEEEEESCTTTCCCS---SCEEEE-ECC
T ss_pred CEEEEeCCCcc-HHHHHHHHhCCCEEEEEeChHHH---HHHHHHHHHcCCCceEEEEeeeeeeecCC---ccccEE-Eee
Confidence 36999999996 566655444 4679999998753 345555553 3 2443 333 23455 569965 566
Q ss_pred cccccChh--hhhchhhhhhh-hccCceEEE
Q 030792 74 ALDYLSPK--YLNKTLPDLAR-VASDGVLIF 101 (171)
Q Consensus 74 aLdyLspr--ylNkTlPeLaR-vs~dgiVif 101 (171)
.++|.... .|...+-...| +..+|++|.
T Consensus 157 ~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 157 WMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccccccchhhhHHHHHHhhCCCCceECC
Confidence 66654321 23322222233 345566653
No 241
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=91.54 E-value=0.23 Score=40.86 Aligned_cols=106 Identities=14% Similarity=0.136 Sum_probs=62.4
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHh--H-hcceeeeeecCCCCC---CCCcccEEEEcc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--H-KGIVRVADIKFPLPY---RAKSFPLVIVSD 73 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv--~-kG~VRvadikfpLPY---R~KSFslVivSD 73 (171)
.+||++|-||++.--.+.+....+..|||..+ ++.+..|++..= . +--+..+|+.-.+|. +..+||+||+ |
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~-d 300 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM-D 300 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE-C
T ss_pred CeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE-C
Confidence 47999999999988888865556899999764 455666665321 1 112456777433332 2468999886 3
Q ss_pred ccccc-Ch-------hhhhchhhhhhh-hccCceEEEecCCCcc
Q 030792 74 ALDYL-SP-------KYLNKTLPDLAR-VASDGVLIFAGYPGQQ 108 (171)
Q Consensus 74 aLdyL-sp-------rylNkTlPeLaR-vs~dgiVif~g~pgq~ 108 (171)
.=-+- ++ +.+.+.+.+..+ +..+|+++++..++..
T Consensus 301 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 344 (396)
T 3c0k_A 301 PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLM 344 (396)
T ss_dssp CSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 10000 00 122233333343 4567788888777543
No 242
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=91.48 E-value=0.18 Score=41.94 Aligned_cols=106 Identities=13% Similarity=0.112 Sum_probs=61.5
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhH---hcceeeeeecCCCCC---CCCcccEEEEcc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH---KGIVRVADIKFPLPY---RAKSFPLVIVSD 73 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~---kG~VRvadikfpLPY---R~KSFslVivSD 73 (171)
.+||++|-||+.+--.+.+....+..|||.++ ++.+..|++..-- .--+..+|+.-.||. +..+||+||+ |
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~-D 292 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII-D 292 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE-C
T ss_pred CeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE-C
Confidence 36999999999988888765556889998665 4556666654311 112556777433443 2458999886 2
Q ss_pred cccc-cChhhhhch---hhhh-----hhhccCceEEEecCCCcc
Q 030792 74 ALDY-LSPKYLNKT---LPDL-----ARVASDGVLIFAGYPGQQ 108 (171)
Q Consensus 74 aLdy-LsprylNkT---lPeL-----aRvs~dgiVif~g~pgq~ 108 (171)
-=-+ .+...+... +.+| ..+..+|+++++..+...
T Consensus 293 PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~ 336 (385)
T 2b78_A 293 PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM 336 (385)
T ss_dssp CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 1000 000111111 2222 345678888888876653
No 243
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=90.66 E-value=0.13 Score=40.95 Aligned_cols=101 Identities=10% Similarity=-0.061 Sum_probs=60.3
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc---------ccchhHHHHHHhHhc--ceeeeeecCCCC-CCC--Cccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD---------IEDADARCKSLVHKG--IVRVADIKFPLP-YRA--KSFP 67 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd---------~~d~d~~CksLv~kG--~VRvadikfpLP-YR~--KSFs 67 (171)
.+|||+|-|++..--.|.+ .+.+..|||..+ ++.+..|++..=-.. -+..+|..--|| +.. .+||
T Consensus 85 ~~VLDlgcG~G~~a~~lA~-~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~fD 163 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLAS-LGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKPD 163 (258)
T ss_dssp CCEEETTCTTCHHHHHHHH-TTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCCS
T ss_pred CeEEEeeCccCHHHHHHHH-hCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCcc
Confidence 3699999999987666665 467899999988 333444443221112 245577644455 333 6899
Q ss_pred EEEEcccccccC-------------h-----hhhhchhhhhhhhccCceEEEec
Q 030792 68 LVIVSDALDYLS-------------P-----KYLNKTLPDLARVASDGVLIFAG 103 (171)
Q Consensus 68 lVivSDaLdyLs-------------p-----rylNkTlPeLaRvs~dgiVif~g 103 (171)
+|++.-...+-. + ......+.+..|++...+||-..
T Consensus 164 ~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~~~vvvk~p 217 (258)
T 2r6z_A 164 IVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKKRVVVKRP 217 (258)
T ss_dssp EEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCSSEEEEEEE
T ss_pred EEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcCcEEEEEcC
Confidence 998743322211 0 12334455777888888887644
No 244
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=90.47 E-value=0.26 Score=42.88 Aligned_cols=97 Identities=18% Similarity=0.221 Sum_probs=59.7
Q ss_pred cceeecCCchhHhHhhhhc--cccccccccccc--ccchhHHHHHHhHhcc----eeeeeecCCCCC-CCCcccEEEE--
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI----VRVADIKFPLPY-RAKSFPLVIV-- 71 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd--~~d~d~~CksLv~kG~----VRvadikfpLPY-R~KSFslViv-- 71 (171)
+|||+|-|+++.-..|.+. ......|+|.++ ++-+..|++. .|+ +..+|.. .+|. -..+||.|++
T Consensus 120 ~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r---~g~~nv~~~~~D~~-~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 120 RVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISR---CGISNVALTHFDGR-VFGAAVPEMFDAILLDA 195 (479)
T ss_dssp EEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHH---HTCCSEEEECCCST-THHHHSTTCEEEEEEEC
T ss_pred EEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH---cCCCcEEEEeCCHH-HhhhhccccCCEEEECC
Confidence 6999999999887777754 346788888765 3334444443 354 4456763 3332 3568999997
Q ss_pred -----------cccccccChhhhh-------chhhhhhhhc-cCceEEEec
Q 030792 72 -----------SDALDYLSPKYLN-------KTLPDLARVA-SDGVLIFAG 103 (171)
Q Consensus 72 -----------SDaLdyLsprylN-------kTlPeLaRvs-~dgiVif~g 103 (171)
.|+..+.+|+.+. +.|-+..|+- ..|.++++.
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 2455556666543 3355555543 457777653
No 245
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=90.15 E-value=0.22 Score=40.87 Aligned_cols=68 Identities=15% Similarity=-0.020 Sum_probs=44.6
Q ss_pred cceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHh---cceeeeeecCCCCC---CCCcccEEEE
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK---GIVRVADIKFPLPY---RAKSFPLVIV 71 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~k---G~VRvadikfpLPY---R~KSFslViv 71 (171)
+||++|-||+..--.+.+. +.+..|||.++ ++-+..|++..=-. -.+..+|+.-.++. +..+||+||+
T Consensus 156 ~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 156 KVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp EEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred cEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 7999999999988888765 44899998764 33355555433111 23556777333332 2578999987
No 246
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=90.09 E-value=0.2 Score=41.14 Aligned_cols=103 Identities=16% Similarity=0.093 Sum_probs=60.6
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHh-cceeeeeecCCCCC---CCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK-GIVRVADIKFPLPY---RAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~k-G~VRvadikfpLPY---R~KSFslVivSDaL 75 (171)
.+||++|-||+++--.+.+. ..+..|||..+ ++.+..|++..=-. --+..+|+.-.+|. ...+||+||+ |.-
T Consensus 211 ~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~-dpP 288 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL-DPP 288 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE-CCC
T ss_pred CeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE-CCC
Confidence 36999999999998888866 78899999764 44455555432101 12455676333332 2578999985 321
Q ss_pred cccC-h-------hhhhchhhhhhhh-ccCceEEEecCCC
Q 030792 76 DYLS-P-------KYLNKTLPDLARV-ASDGVLIFAGYPG 106 (171)
Q Consensus 76 dyLs-p-------rylNkTlPeLaRv-s~dgiVif~g~pg 106 (171)
-+-. + +...+.+.+..|+ ..+|+++++..+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 289 AFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 1111 1 1223344444444 4567888877654
No 247
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=89.42 E-value=0.36 Score=39.04 Aligned_cols=85 Identities=13% Similarity=0.116 Sum_probs=50.2
Q ss_pred ccceeecCCchhHhHhhhhcccc---cccccccccccchhHHHHHH-hHhcceeeeeecCCCCCCCCc-----ccEEEEc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEET---EAWGVEPYDIEDADARCKSL-VHKGIVRVADIKFPLPYRAKS-----FPLVIVS 72 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~t---eAWGVEPyd~~d~d~~CksL-v~kG~VRvadikfpLPYR~KS-----FslVivS 72 (171)
.+||+|||||+.+-..|++.... +..|||..+- .-..++.. ..+=-+..+|+ ..+|+..-. -.+.|++
T Consensus 44 ~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~--~l~~a~~~~~~~v~~i~~D~-~~~~~~~~~~~~~~~~~~vv~ 120 (279)
T 3uzu_A 44 ERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRD--LIGRLEQRFGELLELHAGDA-LTFDFGSIARPGDEPSLRIIG 120 (279)
T ss_dssp CEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHH--HHHHHHHHHGGGEEEEESCG-GGCCGGGGSCSSSSCCEEEEE
T ss_pred CEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHH--HHHHHHHhcCCCcEEEECCh-hcCChhHhcccccCCceEEEE
Confidence 36999999999999988865432 2888886531 11111111 11123556787 455554321 2467888
Q ss_pred ccccccChhhhhchhhh
Q 030792 73 DALDYLSPKYLNKTLPD 89 (171)
Q Consensus 73 DaLdyLsprylNkTlPe 89 (171)
+.==|++..-|-+.|-.
T Consensus 121 NlPY~iss~il~~ll~~ 137 (279)
T 3uzu_A 121 NLPYNISSPLLFHLMSF 137 (279)
T ss_dssp ECCHHHHHHHHHHHGGG
T ss_pred ccCccccHHHHHHHHhc
Confidence 87666666666555543
No 248
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=89.39 E-value=0.39 Score=39.34 Aligned_cols=104 Identities=15% Similarity=0.127 Sum_probs=60.0
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhH--hcceeeeeecCCCCC---CCCcccEEEEccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPY---RAKSFPLVIVSDA 74 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~--kG~VRvadikfpLPY---R~KSFslVivSDa 74 (171)
.+||++|-||+..--.|.+....+..|||..+ ++.+..|++..-- .--+..+|+.-.+|. ...+||+||+ |.
T Consensus 219 ~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~-dp 297 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL-DP 297 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE-CC
T ss_pred CeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE-CC
Confidence 37999999999988888866456899999764 4455555543211 112455676333332 3568999986 32
Q ss_pred cccc-Ch-------hhhhchhhhhhhh-ccCceEEEecCCC
Q 030792 75 LDYL-SP-------KYLNKTLPDLARV-ASDGVLIFAGYPG 106 (171)
Q Consensus 75 LdyL-sp-------rylNkTlPeLaRv-s~dgiVif~g~pg 106 (171)
--+- ++ +...+.+.+..|+ ...|+++++...+
T Consensus 298 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 298 PAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 1110 11 2223344444444 4567777776543
No 249
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=88.89 E-value=0.39 Score=38.51 Aligned_cols=72 Identities=18% Similarity=0.144 Sum_probs=46.2
Q ss_pred cceeecCCchhHhHhhhhccc------ccccccccccccchhHHHHH-HhHhc---ceeeeeecCCCCCCCCcccEEEEc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEE------TEAWGVEPYDIEDADARCKS-LVHKG---IVRVADIKFPLPYRAKSFPLVIVS 72 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~------teAWGVEPyd~~d~d~~Cks-Lv~kG---~VRvadikfpLPYR~KSFslVivS 72 (171)
+||+.|.||++....+.+.-. .+.+|+|..+.- -..|+. +...| -+..+|.-.++ ...+||+||+.
T Consensus 133 ~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~--~~~a~~n~~~~g~~~~i~~~D~l~~~--~~~~fD~Ii~N 208 (344)
T 2f8l_A 133 SILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLL--ISLALVGADLQRQKMTLLHQDGLANL--LVDPVDVVISD 208 (344)
T ss_dssp EEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHH--HHHHHHHHHHHTCCCEEEESCTTSCC--CCCCEEEEEEE
T ss_pred EEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHH--HHHHHHHHHhCCCCceEEECCCCCcc--ccCCccEEEEC
Confidence 699999999999887775532 678999876532 233332 22334 35666753333 36789999876
Q ss_pred cccccc
Q 030792 73 DALDYL 78 (171)
Q Consensus 73 DaLdyL 78 (171)
--.-|+
T Consensus 209 PPfg~~ 214 (344)
T 2f8l_A 209 LPVGYY 214 (344)
T ss_dssp CCCSEE
T ss_pred CCCCCc
Confidence 554444
No 250
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=88.68 E-value=0.18 Score=42.53 Aligned_cols=96 Identities=19% Similarity=0.171 Sum_probs=58.8
Q ss_pred ccceeecCCchhHhHhhhhc-cccccccccccc--ccchhHHHHHHhH------------hcc----eeeeeecCCCCCC
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVH------------KGI----VRVADIKFPLPYR 62 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e~teAWGVEPyd--~~d~d~~CksLv~------------kG~----VRvadikfpLPYR 62 (171)
.+|||+|-||+.+--.+.++ ...+.++||..+ ++-+..|++..-. .|+ +..+|..-.++..
T Consensus 49 ~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~~ 128 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAER 128 (378)
T ss_dssp SEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHS
T ss_pred CEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHhc
Confidence 36999999998887777766 445688887653 4556677776510 032 3446664433333
Q ss_pred CCcccEEEEcccccccC-hhhhhchhhhhhhhccCceEEEec
Q 030792 63 AKSFPLVIVSDALDYLS-PKYLNKTLPDLARVASDGVLIFAG 103 (171)
Q Consensus 63 ~KSFslVivSDaLdyLs-prylNkTlPeLaRvs~dgiVif~g 103 (171)
..+||+|+ .|. |-+ ..+|+..+. .+...|+++++.
T Consensus 129 ~~~fD~I~-lDP--~~~~~~~l~~a~~---~lk~gG~l~vt~ 164 (378)
T 2dul_A 129 HRYFHFID-LDP--FGSPMEFLDTALR---SAKRRGILGVTA 164 (378)
T ss_dssp TTCEEEEE-ECC--SSCCHHHHHHHHH---HEEEEEEEEEEE
T ss_pred cCCCCEEE-eCC--CCCHHHHHHHHHH---hcCCCCEEEEEe
Confidence 46899988 465 333 345544432 245678887775
No 251
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=88.49 E-value=0.46 Score=39.94 Aligned_cols=98 Identities=15% Similarity=0.234 Sum_probs=58.4
Q ss_pred cceeecCCchhHhHhhhh-cccccccccccccccchhHHHHHHhH-----hcceeeeeecCCC-CCCCCcccEEEEcccc
Q 030792 3 KVLHVGPDTCSVVSTLLK-EEETEAWGVEPYDIEDADARCKSLVH-----KGIVRVADIKFPL-PYRAKSFPLVIVSDAL 75 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llk-ee~teAWGVEPyd~~d~d~~CksLv~-----kG~VRvadikfpL-PYR~KSFslVivSDaL 75 (171)
+||++|-|++++...|++ -.+.+.-+||..+. +-.-|+.-.. +--|.++|..--+ .+...+||+||+ |+.
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~--vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~-D~~ 168 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDAE--LARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIR-DVF 168 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCHH--HHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEE-CCS
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCHH--HHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEE-CCC
Confidence 799999999999999998 34567777776542 2334444332 2235667863222 345689999885 554
Q ss_pred cccC-hhhh--hchhhhhhh-hccCceEEEec
Q 030792 76 DYLS-PKYL--NKTLPDLAR-VASDGVLIFAG 103 (171)
Q Consensus 76 dyLs-pryl--NkTlPeLaR-vs~dgiVif~g 103 (171)
+... |..| -..+-++.| +..+|++++..
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 4322 2222 223344444 45677766544
No 252
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=87.58 E-value=0.25 Score=41.81 Aligned_cols=69 Identities=16% Similarity=0.042 Sum_probs=46.6
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslViv 71 (171)
.+||++|-||++.--.+.+... +..|||.++ ++-+..|++..--...+..+|+.-.++.-...||+||+
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~ 286 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLL 286 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEE
T ss_pred CeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEE
Confidence 3799999999998888886544 488988765 44455565543222347789985445443344999875
No 253
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=86.58 E-value=0.49 Score=37.88 Aligned_cols=61 Identities=15% Similarity=0.043 Sum_probs=42.1
Q ss_pred cceeecCCchhHhHhhhhc--ccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEE
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIV 71 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslViv 71 (171)
+||++|-||+.+...+.+. ......|||..+.-- ..| ..--+..+|+.- .+ ...+||+||.
T Consensus 42 ~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~--~~a----~~~~~~~~D~~~-~~-~~~~fD~Ii~ 104 (421)
T 2ih2_A 42 RVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKAL--DLP----PWAEGILADFLL-WE-PGEAFDLILG 104 (421)
T ss_dssp EEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTC--CCC----TTEEEEESCGGG-CC-CSSCEEEEEE
T ss_pred EEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHH--HhC----CCCcEEeCChhh-cC-ccCCCCEEEE
Confidence 7999999999998888865 457889998754321 111 234566788743 32 2468999998
No 254
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=85.81 E-value=0.33 Score=42.42 Aligned_cols=97 Identities=15% Similarity=0.150 Sum_probs=57.2
Q ss_pred cceeecCCchhHhHhhhhc--cccccccccccc--ccchhHHHHHHhHhcc----eeeeeecCCCCCCCCcccEEEE---
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI----VRVADIKFPLPYRAKSFPLVIV--- 71 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd--~~d~d~~CksLv~kG~----VRvadikfpLPYR~KSFslViv--- 71 (171)
+|||+|-++++.-..|.+. ......++|... ++.+..|++. .|+ +..+|..-..++-..+||+|++
T Consensus 108 ~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r---~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaP 184 (456)
T 3m4x_A 108 KVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIER---WGVSNAIVTNHAPAELVPHFSGFFDRIVVDAP 184 (456)
T ss_dssp EEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHH---HTCSSEEEECCCHHHHHHHHTTCEEEEEEECC
T ss_pred EEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH---cCCCceEEEeCCHHHhhhhccccCCEEEECCC
Confidence 6999999998877666643 345778887764 3444555543 353 3345653222234678999986
Q ss_pred ----------cccccccChhhhh-------chhhhhhhh-ccCceEEEe
Q 030792 72 ----------SDALDYLSPKYLN-------KTLPDLARV-ASDGVLIFA 102 (171)
Q Consensus 72 ----------SDaLdyLsprylN-------kTlPeLaRv-s~dgiVif~ 102 (171)
.|+..+.++..+. +.|.+..|+ ...|.++++
T Consensus 185 CSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYs 233 (456)
T 3m4x_A 185 CSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYS 233 (456)
T ss_dssp CCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 2333445555543 334555554 456777773
No 255
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=85.18 E-value=0.35 Score=41.91 Aligned_cols=99 Identities=22% Similarity=0.221 Sum_probs=55.5
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhH-------------hcceeeeeecCCCCC---CCCc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-------------KGIVRVADIKFPLPY---RAKS 65 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~-------------kG~VRvadikfpLPY---R~KS 65 (171)
++||++|-|+|++...+++....+.-.||..+. +-.-|+.-.. +=-|.++|.---|.- ...+
T Consensus 190 krVL~IGgG~G~~arellk~~~~~Vt~VEID~~--vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 190 KDVLILGGGDGGILCEIVKLKPKMVTMVEIDQM--VIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp CEEEEEECTTCHHHHHHHTTCCSEEEEEESCHH--HHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CEEEEEECChhHHHHHHHHCCCCEEEEEECCHH--HHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 589999999999999999876555666654432 2233333321 123456676332321 2578
Q ss_pred ccEEEEccccc-c--cCh------hhhhchhhhh-hhhccCceEEEec
Q 030792 66 FPLVIVSDALD-Y--LSP------KYLNKTLPDL-ARVASDGVLIFAG 103 (171)
Q Consensus 66 FslVivSDaLd-y--Lsp------rylNkTlPeL-aRvs~dgiVif~g 103 (171)
||+||+ |.-| - ..| +++...+..+ .++..+|+++.-+
T Consensus 268 fDvII~-D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 268 FDYVIN-DLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp EEEEEE-ECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceEEEE-CCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 998886 6544 1 123 2222222222 3466788776544
No 256
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=85.08 E-value=0.71 Score=37.49 Aligned_cols=97 Identities=10% Similarity=0.008 Sum_probs=52.5
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccch---hH-HHHHHhHhc-ceeee-eecCCCCCCCCcccEEEEcccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDA---DA-RCKSLVHKG-IVRVA-DIKFPLPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~---d~-~CksLv~kG-~VRva-dikfpLPYR~KSFslVivSDaL 75 (171)
.+|||+|-|+++.-..|.+. .+..||+.|.+... +. ..+.+-..+ .+..+ |+ +.+| ..+||+|++ |+.
T Consensus 84 ~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~-~~l~--~~~fD~V~s-d~~ 157 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDV-FFIP--PERCDTLLC-DIG 157 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCT-TTSC--CCCCSEEEE-CCC
T ss_pred CEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEecccc-ccCC--cCCCCEEEE-CCc
Confidence 47999999999987666654 57889887422111 00 000000011 12334 66 5566 468999876 543
Q ss_pred cc---cChhhh--hchhhhhhhhcc-CceEEEecC
Q 030792 76 DY---LSPKYL--NKTLPDLARVAS-DGVLIFAGY 104 (171)
Q Consensus 76 dy---Lspryl--NkTlPeLaRvs~-dgiVif~g~ 104 (171)
-. -.+... -+.|.+..|+-+ .|.+++.-+
T Consensus 158 ~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 158 ESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred cccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 21 111111 147888877654 556665433
No 257
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=84.62 E-value=1 Score=36.02 Aligned_cols=96 Identities=17% Similarity=0.202 Sum_probs=60.5
Q ss_pred cceeecCCchhHhHhhhhc-------c------ccccccccccccc------------chhHHHHHHhHh----------
Q 030792 3 KVLHVGPDTCSVVSTLLKE-------E------ETEAWGVEPYDIE------------DADARCKSLVHK---------- 47 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke-------e------~teAWGVEPyd~~------------d~d~~CksLv~k---------- 47 (171)
+||.+|-||..-...+++. . ...-.+||+|.+. +...-.+.|++.
T Consensus 63 ~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~~r 142 (257)
T 2qy6_A 63 VVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHR 142 (257)
T ss_dssp EEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEEEE
T ss_pred EEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccchhh
Confidence 6999999998866555432 1 2477999999853 222345666553
Q ss_pred -----cc----eeeeeecCCCCCCCC----cccEEEEcccccccChh-----hhhchhhhhhhhccCceEEEe
Q 030792 48 -----GI----VRVADIKFPLPYRAK----SFPLVIVSDALDYLSPK-----YLNKTLPDLARVASDGVLIFA 102 (171)
Q Consensus 48 -----G~----VRvadikfpLPYR~K----SFslVivSDaLdyLspr-----ylNkTlPeLaRvs~dgiVif~ 102 (171)
|. +.++|..--||--+. .||+|+. |+ .+|+ |-...+.+++|+.+.|=++.|
T Consensus 143 ~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~ifl-D~---fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 143 LLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFL-DG---FAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEE-CS---SCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred eeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEE-CC---CCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 22 345666545665544 7999986 54 3343 233567788998887665554
No 258
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=83.84 E-value=0.43 Score=37.16 Aligned_cols=66 Identities=12% Similarity=0.141 Sum_probs=42.2
Q ss_pred ccceeecCCchhHhHhhhhc--cccccccccccc--ccchhHHHHHHhHhcc----eeeeeecCCCCC----CCCcccEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI----VRVADIKFPLPY----RAKSFPLV 69 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke--e~teAWGVEPyd--~~d~d~~CksLv~kG~----VRvadikfpLPY----R~KSFslV 69 (171)
.+|||+|-|+++.-..|.+. ...+..|+|.+. ++.+..+++. .|+ +..+|+. .+|. ...+||+|
T Consensus 85 ~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~---~g~~~v~~~~~D~~-~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 85 DFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINR---MGVLNTIIINADMR-KYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHH---TTCCSEEEEESCHH-HHHHHHHHTTCCEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHH---hCCCcEEEEeCChH-hcchhhhhccccCCEE
Confidence 36999999999988777753 337889998764 3334444433 343 3446663 2332 25689998
Q ss_pred EE
Q 030792 70 IV 71 (171)
Q Consensus 70 iv 71 (171)
++
T Consensus 161 l~ 162 (274)
T 3ajd_A 161 LL 162 (274)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 259
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=82.09 E-value=0.24 Score=39.39 Aligned_cols=82 Identities=11% Similarity=0.058 Sum_probs=46.5
Q ss_pred cceeecCCchhHhHhhhhccccc--ccccccccc--cchhHHHHHHhHhcceeeeeecCCCCCCCC----cccEEEEccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETE--AWGVEPYDI--EDADARCKSLVHKGIVRVADIKFPLPYRAK----SFPLVIVSDA 74 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~te--AWGVEPyd~--~d~d~~CksLv~kG~VRvadikfpLPYR~K----SFslVivSDa 74 (171)
+||+|||||+.+-. |. . ..+ ..|||..+- +-+..++... .+=-+..+|+ ..+|+... .++.+|+|+.
T Consensus 24 ~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~~-~~v~~i~~D~-~~~~~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 24 AMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFLG-PKLTIYQQDA-MTFNFGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp CEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTTG-GGEEEECSCG-GGCCHHHHHHHHTSCEEEEEEC
T ss_pred EEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhccC-CceEEEECch-hhCCHHHhhcccCCceEEEECC
Confidence 69999999999888 43 3 455 778776531 1111122111 1123456777 44444322 2457888887
Q ss_pred ccccChhhhhchhhh
Q 030792 75 LDYLSPKYLNKTLPD 89 (171)
Q Consensus 75 LdyLsprylNkTlPe 89 (171)
-=|++..-+-+.|.+
T Consensus 99 PY~i~~~il~~ll~~ 113 (252)
T 1qyr_A 99 PYNISTPLMFHLFSY 113 (252)
T ss_dssp CTTTHHHHHHHHHTT
T ss_pred CCCccHHHHHHHHhc
Confidence 666666555555543
No 260
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=81.89 E-value=1.5 Score=36.83 Aligned_cols=66 Identities=14% Similarity=0.126 Sum_probs=43.7
Q ss_pred cceeecCCchhHhHhhhhc--------------ccccccccccccccchhHHH-HHHhHhcc------eeeeeecCCCCC
Q 030792 3 KVLHVGPDTCSVVSTLLKE--------------EETEAWGVEPYDIEDADARC-KSLVHKGI------VRVADIKFPLPY 61 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--------------e~teAWGVEPyd~~d~d~~C-ksLv~kG~------VRvadikfpLPY 61 (171)
+|||.|-||++....+.+. .....+|+|..+- +-+-| +.|...|+ ++.+|. +..|.
T Consensus 174 ~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~--~~~lA~~nl~l~g~~~~~~~i~~gD~-l~~~~ 250 (445)
T 2okc_A 174 TVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPL--VVTLASMNLYLHGIGTDRSPIVCEDS-LEKEP 250 (445)
T ss_dssp CEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHH--HHHHHHHHHHHTTCCSSCCSEEECCT-TTSCC
T ss_pred EEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHH--HHHHHHHHHHHhCCCcCCCCEeeCCC-CCCcc
Confidence 7999999999988776643 3467889987652 22333 34555554 677776 44444
Q ss_pred CCCcccEEEEc
Q 030792 62 RAKSFPLVIVS 72 (171)
Q Consensus 62 R~KSFslVivS 72 (171)
. .+||+||+-
T Consensus 251 ~-~~fD~Iv~N 260 (445)
T 2okc_A 251 S-TLVDVILAN 260 (445)
T ss_dssp S-SCEEEEEEC
T ss_pred c-CCcCEEEEC
Confidence 3 389998863
No 261
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=81.80 E-value=2 Score=34.36 Aligned_cols=89 Identities=17% Similarity=0.251 Sum_probs=59.0
Q ss_pred cceeecCCchhHhHhhhhc--cccccccccccc--ccchhHHHHHHhHhcceee-eeecCC--CCCCCCcccEEEEcccc
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGIVRV-ADIKFP--LPYRAKSFPLVIVSDAL 75 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd--~~d~d~~CksLv~kG~VRv-adikfp--LPYR~KSFslVivSDaL 75 (171)
+||++|-|++..++.|-+- .++...|||..+ ++++..+++. +.++..| +|...| .|.-..+||+|+.
T Consensus 80 ~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~--~~ni~~V~~d~~~p~~~~~~~~~vDvVf~---- 153 (233)
T 4df3_A 80 RILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD--RRNIFPILGDARFPEKYRHLVEGVDGLYA---- 153 (233)
T ss_dssp EEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT--CTTEEEEESCTTCGGGGTTTCCCEEEEEE----
T ss_pred EEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh--hcCeeEEEEeccCccccccccceEEEEEE----
Confidence 7999999999999988763 567789998764 3344444332 2345444 444443 3556678888773
Q ss_pred cccChhhhhchhhhhhhhccCc
Q 030792 76 DYLSPKYLNKTLPDLARVASDG 97 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~dg 97 (171)
|.--|.+.-..+.+..|+-+.|
T Consensus 154 d~~~~~~~~~~l~~~~r~LKpG 175 (233)
T 4df3_A 154 DVAQPEQAAIVVRNARFFLRDG 175 (233)
T ss_dssp CCCCTTHHHHHHHHHHHHEEEE
T ss_pred eccCChhHHHHHHHHHHhccCC
Confidence 4455666667888888876554
No 262
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=81.30 E-value=5.3 Score=31.51 Aligned_cols=91 Identities=20% Similarity=0.127 Sum_probs=46.2
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcc-------eeeeeecCC--------------CC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGI-------VRVADIKFP--------------LP 60 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~-------VRvadikfp--------------LP 60 (171)
++||.+|.|-.++.-..+ .+++..-||-.+ +-++.-=+.+-+.|. ++.+|+.-. +|
T Consensus 32 ~~VLEiGtGySTl~lA~~--~~g~VvtvE~d~-~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~ 108 (202)
T 3cvo_A 32 EVILEYGSGGSTVVAAEL--PGKHVTSVESDR-AWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYP 108 (202)
T ss_dssp SEEEEESCSHHHHHHHTS--TTCEEEEEESCH-HHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTT
T ss_pred CEEEEECchHHHHHHHHc--CCCEEEEEeCCH-HHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHH
Confidence 579999986433332221 156677777543 212222223445564 556774211 22
Q ss_pred --------CC-CCcccEEEEcccccccChhhhhchhhhhhhh-ccCceEEEe
Q 030792 61 --------YR-AKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 102 (171)
Q Consensus 61 --------YR-~KSFslVivSDaLdyLsprylNkTlPeLaRv-s~dgiVif~ 102 (171)
+. ..+||+|++ |+ + .-|..++...+. ...|+||+=
T Consensus 109 ~~~~~i~~~~~~~~fDlIfI-Dg-~-----k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 109 DYPLAVWRTEGFRHPDVVLV-DG-R-----FRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp HHHHGGGGCTTCCCCSEEEE-CS-S-----SHHHHHHHHHHHCSSCEEEEET
T ss_pred HHhhhhhccccCCCCCEEEE-eC-C-----CchhHHHHHHHhcCCCeEEEEe
Confidence 21 368999987 55 1 113445554344 455555553
No 263
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=78.33 E-value=2.9 Score=33.72 Aligned_cols=102 Identities=13% Similarity=-0.009 Sum_probs=60.5
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccc-----cchhHHHHH-------HhHhcceeeeeecCCCCCCCCcccEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDI-----EDADARCKS-------LVHKGIVRVADIKFPLPYRAKSFPLV 69 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~-----~d~d~~Cks-------Lv~kG~VRvadikfpLPYR~KSFslV 69 (171)
.+|||+|-|++..---|... +.++.|||.... .+.-..++. +..+=-+..+|..--|++-..+||+|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV 168 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVV 168 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEE
T ss_pred CEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEE
Confidence 36999999998876666644 568999999872 111111221 21333356677755577655689998
Q ss_pred EEcccc-------------ccc---C--hhhhhchhhhhhhhccCceEEEecC
Q 030792 70 IVSDAL-------------DYL---S--PKYLNKTLPDLARVASDGVLIFAGY 104 (171)
Q Consensus 70 ivSDaL-------------dyL---s--prylNkTlPeLaRvs~dgiVif~g~ 104 (171)
+.-=.. +-| . ..-....+.++.|++.+.|||-...
T Consensus 169 ~lDP~y~~~~~saavkk~~~~lr~l~~~~~~~~~ll~~a~~~a~~rvvVK~p~ 221 (258)
T 2oyr_A 169 YLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVKRPD 221 (258)
T ss_dssp EECCCCCCCCC-----HHHHHHHHHSCCCTTGGGGHHHHHHHCSSEEEEEEET
T ss_pred EEcCCCCCcccchHHHHHHHHHHHhhcCCccHHHHHHHHHHhcCCeEEEEeCC
Confidence 751111 111 0 0113445667788888888887654
No 264
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=77.58 E-value=1.7 Score=35.53 Aligned_cols=40 Identities=10% Similarity=0.020 Sum_probs=30.3
Q ss_pred cceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHH
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKS 43 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~Cks 43 (171)
+|||+|-|++.+--.|. ....+..|||..+ ++++..|++.
T Consensus 216 ~vLDl~cG~G~~~l~la-~~~~~V~gvd~~~~ai~~a~~n~~~ 257 (369)
T 3bt7_A 216 DLLELYCGNGNFSLALA-RNFDRVLATEIAKPSVAAAQYNIAA 257 (369)
T ss_dssp EEEEESCTTSHHHHHHG-GGSSEEEEECCCHHHHHHHHHHHHH
T ss_pred EEEEccCCCCHHHHHHH-hcCCEEEEEECCHHHHHHHHHHHHH
Confidence 69999999988877665 4667899999775 5666666653
No 265
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=77.56 E-value=1.6 Score=37.35 Aligned_cols=116 Identities=16% Similarity=0.098 Sum_probs=66.0
Q ss_pred ccceeecCCchhHhHhhhhc-cc-cccccccccc--ccchhHHHHHHh--Hh-cceeeeeecCCCC-CCCCcccEEEEcc
Q 030792 2 HKVLHVGPDTCSVVSTLLKE-EE-TEAWGVEPYD--IEDADARCKSLV--HK-GIVRVADIKFPLP-YRAKSFPLVIVSD 73 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llke-e~-teAWGVEPyd--~~d~d~~CksLv--~k-G~VRvadikfpLP-YR~KSFslVivSD 73 (171)
.+|||++-||+.+-=.++++ .+ .++++||..+ ++.+..|++..= .+ -.+..+|..--|+ ....+||+|+ .|
T Consensus 54 ~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~-lD 132 (392)
T 3axs_A 54 VKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD-LD 132 (392)
T ss_dssp EEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE-EC
T ss_pred CEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE-EC
Confidence 36999999998776666654 23 6789988654 344555655331 11 2344567644344 4456899987 46
Q ss_pred cccccChhhhhchhhhhhh-hccCceEEEecC-----CCcchhhhhhhhhcCCCc-ccc
Q 030792 74 ALDYLSPKYLNKTLPDLAR-VASDGVLIFAGY-----PGQQRAKVAELSKFGRPA-KMR 125 (171)
Q Consensus 74 aLdyLsprylNkTlPeLaR-vs~dgiVif~g~-----pgq~~ak~~elskfgr~a-k~R 125 (171)
. |-+++. .+....+ +...|+++.+-- .|. --...+.|+|--. +++
T Consensus 133 P--~g~~~~---~l~~a~~~Lk~gGll~~t~t~~~~l~g~--~~~~~~rkYg~~p~r~~ 184 (392)
T 3axs_A 133 P--FGTPVP---FIESVALSMKRGGILSLTATDTAPLSGT--YPKTCMRRYMARPLRNE 184 (392)
T ss_dssp C--SSCCHH---HHHHHHHHEEEEEEEEEEECCHHHHTTS--SHHHHHHHHSSBCCCST
T ss_pred C--CcCHHH---HHHHHHHHhCCCCEEEEEecchhhhccc--cHHHHHHHhCCcccccc
Confidence 6 433322 2333334 567787777651 121 2245667777543 344
No 266
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=75.70 E-value=3.6 Score=34.43 Aligned_cols=103 Identities=16% Similarity=0.225 Sum_probs=60.6
Q ss_pred ccceeecCCchhHhHhhhhccc-ccccccccccccchhHHHHHHh---Hhc-------ceeeeeecCCCCCCCCcccEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYDIEDADARCKSLV---HKG-------IVRVADIKFPLPYRAKSFPLVI 70 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~-teAWGVEPyd~~d~d~~CksLv---~kG-------~VRvadikfpLPYR~KSFslVi 70 (171)
++||-+|=|.|++++.+++-.. .+.-.||.-+. +=.-|+.-. ..| -|.++|----|--..++||+||
T Consensus 85 k~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~--Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 85 KHVLIIGGGDGAMLREVTRHKNVESITMVEIDAG--VVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHH--HHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CeEEEECCCchHHHHHHHHcCCcceEEEEcCCHH--HHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 5899999999999999998643 33334433221 233455433 122 3566776555555678899776
Q ss_pred EcccccccCh-------hhhhchhhhhhhhccCceEEE-ecCCCcchh
Q 030792 71 VSDALDYLSP-------KYLNKTLPDLARVASDGVLIF-AGYPGQQRA 110 (171)
Q Consensus 71 vSDaLdyLsp-------rylNkTlPeLaRvs~dgiVif-~g~pgq~~a 110 (171)
+ |.-|-..| ++.... -.+++.+||++. +|.|-.+..
T Consensus 163 ~-D~~dp~~~~~~L~t~eFy~~~---~~~L~p~Gv~v~q~~sp~~~~~ 206 (294)
T 3o4f_A 163 S-DCTDPIGPGESLFTSAFYEGC---KRCLNPGGIFVAQNGVCFLQQE 206 (294)
T ss_dssp E-SCCCCCCTTCCSSCCHHHHHH---HHTEEEEEEEEEEEEESSSCCH
T ss_pred E-eCCCcCCCchhhcCHHHHHHH---HHHhCCCCEEEEecCCcccChH
Confidence 4 76664333 222111 145677888764 456655433
No 267
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=75.03 E-value=2.8 Score=34.24 Aligned_cols=93 Identities=6% Similarity=0.013 Sum_probs=54.5
Q ss_pred cceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHhcceee--eeecCCCCCCCCcccEEEEccccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRV--ADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~kG~VRv--adikfpLPYR~KSFslVivSDaLdyL 78 (171)
.|||+|-|++..-=.+.+....+.+++|... ++-+..|++..=-.+.|++ +|. +.++- ...||.||.-.- +-
T Consensus 128 ~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~-~~~~~-~~~~D~Vi~~~p--~~ 203 (278)
T 3k6r_A 128 LVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN-RDFPG-ENIADRILMGYV--VR 203 (278)
T ss_dssp EEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT-TTCCC-CSCEEEEEECCC--SS
T ss_pred EEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcH-HHhcc-ccCCCEEEECCC--Cc
Confidence 6999999998876666666667788888653 3445555554322344554 665 44443 467999885321 22
Q ss_pred Chhhhhchhhhhhhhcc-CceEEEec
Q 030792 79 SPKYLNKTLPDLARVAS-DGVLIFAG 103 (171)
Q Consensus 79 sprylNkTlPeLaRvs~-dgiVif~g 103 (171)
+.+ .||+..++.+ .|++.+-+
T Consensus 204 ~~~----~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 204 THE----FIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp GGG----GHHHHHHHEEEEEEEEEEE
T ss_pred HHH----HHHHHHHHcCCCCEEEEEe
Confidence 233 4444445444 45555433
No 268
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=71.16 E-value=1.4 Score=38.32 Aligned_cols=69 Identities=17% Similarity=0.100 Sum_probs=45.3
Q ss_pred ccceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHH---hHhcceeeeeecCCCCC-CCCcccEEEE
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSL---VHKGIVRVADIKFPLPY-RAKSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksL---v~kG~VRvadikfpLPY-R~KSFslViv 71 (171)
.+|||+|-|++..-..|. ..+.+..|||... ++-+..|++.+ +.+--+..+|+.-.||. ...+||+|++
T Consensus 95 ~~VLDLgcG~G~~al~LA-~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 95 TKVVDLTGGLGIDFIALM-SKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp CEEEESSCSSSHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CEEEEeCCCchHHHHHHH-hcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 369999999877655444 5567899998765 34456666644 22223667888544554 3468999985
No 269
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=70.85 E-value=16 Score=25.04 Aligned_cols=85 Identities=13% Similarity=0.112 Sum_probs=51.1
Q ss_pred EEEEcccccccChhhhhchhhhhhhhccCceEEEecC-CCcchhhhhh---hhhcCCCccccchhHHHHHHHHhccccch
Q 030792 68 LVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGY-PGQQRAKVAE---LSKFGRPAKMRSSSWWIRYFVQTSLEENE 143 (171)
Q Consensus 68 lVivSDaLdyLsprylNkTlPeLaRvs~dgiVif~g~-pgq~~ak~~e---lskfgr~ak~RsssWW~r~F~q~~leeNe 143 (171)
.||+=|=+|++++.-+|.-+.-|-+.....++|+++. +.+-...+.. .-.|..+-.--...|+.+++.+.|+.-++
T Consensus 128 ~vlviDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~t~~~~~~~~~l~~r~~~i~l~~l~~~e~~~~l~~~~~~~~~~~~~ 207 (250)
T 1njg_A 128 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEP 207 (250)
T ss_dssp EEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHTTCCBCH
T ss_pred eEEEEECcccccHHHHHHHHHHHhcCCCceEEEEEeCChHhCCHHHHHHhhhccCCCCCHHHHHHHHHHHHHhcCCCCCH
Confidence 5777788999999988887777766666777888774 3322111110 01122222222345777777777877777
Q ss_pred HHHHHHHHH
Q 030792 144 PAVKKFEQA 152 (171)
Q Consensus 144 a~~kkfeqa 152 (171)
++...+-+.
T Consensus 208 ~~~~~l~~~ 216 (250)
T 1njg_A 208 RALQLLARA 216 (250)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666655443
No 270
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=68.11 E-value=7.6 Score=31.94 Aligned_cols=98 Identities=14% Similarity=0.275 Sum_probs=59.4
Q ss_pred cceeecCCchh---HhHhhhhc---ccccccccccccc------c-------------------chhHHHHHHhHhcc--
Q 030792 3 KVLHVGPDTCS---VVSTLLKE---EETEAWGVEPYDI------E-------------------DADARCKSLVHKGI-- 49 (171)
Q Consensus 3 kVLHvGP~tC~---vVs~llke---e~teAWGVEPyd~------~-------------------d~d~~CksLv~kG~-- 49 (171)
.||.+|..++. ..+.++++ .+...||++.++- + ..+..-+.+-+.|+
T Consensus 109 ~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl~~ 188 (282)
T 2wk1_A 109 DLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDLLD 188 (282)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTCCS
T ss_pred cEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCCCc
Confidence 68899987765 34445543 3677888886531 0 11112234444554
Q ss_pred ----eeeeeecCCCCCC-CCcccEEEEccccccc-ChhhhhchhhhhhhhccCceEEEecC
Q 030792 50 ----VRVADIKFPLPYR-AKSFPLVIVSDALDYL-SPKYLNKTLPDLARVASDGVLIFAGY 104 (171)
Q Consensus 50 ----VRvadikfpLPYR-~KSFslVivSDaLdyL-sprylNkTlPeLaRvs~dgiVif~g~ 104 (171)
+..+|..--||=- ..+||+|+. |+=-|- ...||+..+| |++..|||||=-+
T Consensus 189 ~~I~li~Gda~etL~~~~~~~~d~vfI-DaD~y~~~~~~Le~~~p---~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 189 EQVRFLPGWFKDTLPTAPIDTLAVLRM-DGDLYESTWDTLTNLYP---KVSVGGYVIVDDY 245 (282)
T ss_dssp TTEEEEESCHHHHSTTCCCCCEEEEEE-CCCSHHHHHHHHHHHGG---GEEEEEEEEESSC
T ss_pred CceEEEEeCHHHHHhhCCCCCEEEEEE-cCCccccHHHHHHHHHh---hcCCCEEEEEcCC
Confidence 4555554445532 468999886 552343 2577888777 6888999999764
No 271
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=67.90 E-value=3.2 Score=32.82 Aligned_cols=77 Identities=16% Similarity=0.218 Sum_probs=52.2
Q ss_pred cceeecCCchhHhHhhhhc-ccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCC--CcccEEEEcccccccC
Q 030792 3 KVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRA--KSFPLVIVSDALDYLS 79 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke-e~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~--KSFslVivSDaLdyLs 79 (171)
+||.||-|+..-|+..|++ .+-+.-+++-.+-. ++ +..+|| |. |-+. +.||||- +.=.
T Consensus 38 rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~A-v~-----------~v~dDi-F~-P~~~~Y~~~DLIY-----sirP 98 (153)
T 2k4m_A 38 RVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSH-GG-----------IVRDDI-TS-PRMEIYRGAALIY-----SIRP 98 (153)
T ss_dssp EEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSS-TT-----------EECCCS-SS-CCHHHHTTEEEEE-----EESC
T ss_pred cEEEEccCCChHHHHHHHHhCCCeEEEEECCccc-cc-----------eEEccC-CC-CcccccCCcCEEE-----EcCC
Confidence 7999999999878888877 66666665543322 11 667899 55 5554 5888875 3457
Q ss_pred hhhhhchhhhhhhh-ccCce
Q 030792 80 PKYLNKTLPDLARV-ASDGV 98 (171)
Q Consensus 80 prylNkTlPeLaRv-s~dgi 98 (171)
|.-|-.-+=+||+- .+|-|
T Consensus 99 P~El~~~i~~lA~~v~adli 118 (153)
T 2k4m_A 99 PAEIHSSLMRVADAVGARLI 118 (153)
T ss_dssp CTTTHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHHHHcCCCEE
Confidence 88887777788764 34433
No 272
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=64.54 E-value=17 Score=30.62 Aligned_cols=79 Identities=15% Similarity=0.188 Sum_probs=39.7
Q ss_pred ccccccccc--ccchhHHHHHHhHhcc-----eeeeeecCCCCCCCCcccEEEEcc-cccccC-hhhhhchhhhhhhhc-
Q 030792 25 EAWGVEPYD--IEDADARCKSLVHKGI-----VRVADIKFPLPYRAKSFPLVIVSD-ALDYLS-PKYLNKTLPDLARVA- 94 (171)
Q Consensus 25 eAWGVEPyd--~~d~d~~CksLv~kG~-----VRvadikfpLPYR~KSFslVivSD-aLdyLs-prylNkTlPeLaRvs- 94 (171)
...|+|... ++-+..| +.+.|+ +..+|+ +.+|. ..+||+||+.= .-+.+. ...+.....+|.++-
T Consensus 265 ~V~GvDid~~al~~Ar~N---a~~~gl~~~I~~~~~D~-~~~~~-~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk 339 (393)
T 3k0b_A 265 NIIGGDIDARLIEIAKQN---AVEAGLGDLITFRQLQV-ADFQT-EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYK 339 (393)
T ss_dssp CEEEEESCHHHHHHHHHH---HHHTTCTTCSEEEECCG-GGCCC-CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHH---HHHcCCCCceEEEECCh-HhCCC-CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHh
Confidence 456665543 2223333 334454 556888 55554 35899887530 111111 123333444444333
Q ss_pred ---cCceEEEecCCCcc
Q 030792 95 ---SDGVLIFAGYPGQQ 108 (171)
Q Consensus 95 ---~dgiVif~g~pgq~ 108 (171)
.-.+.|+++.+.-.
T Consensus 340 ~~~g~~~~iit~~~~l~ 356 (393)
T 3k0b_A 340 RMPTWSVYVLTSYELFE 356 (393)
T ss_dssp TCTTCEEEEEECCTTHH
T ss_pred cCCCCEEEEEECCHHHH
Confidence 34678888877654
No 273
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=64.38 E-value=9 Score=31.27 Aligned_cols=39 Identities=23% Similarity=0.446 Sum_probs=27.1
Q ss_pred CcccEEEEccccc-ccChhhhhchhhhhhhhccCceEEEecC
Q 030792 64 KSFPLVIVSDALD-YLSPKYLNKTLPDLARVASDGVLIFAGY 104 (171)
Q Consensus 64 KSFslVivSDaLd-yLsprylNkTlPeLaRvs~dgiVif~g~ 104 (171)
..||+||.+|+=- .|++.++. .|-+.++ .--|+|++.|.
T Consensus 49 ~~yDvIIl~d~~~~~l~~~~~~-~L~~yV~-~GGgLi~~gG~ 88 (259)
T 3rht_A 49 AKQDLVILSDYPAERMTAQAID-QLVTMVK-AGCGLVMLGGW 88 (259)
T ss_dssp HTCSEEEEESCCGGGBCHHHHH-HHHHHHH-TTCEEEEECST
T ss_pred hcCCEEEEcCCccccCCHHHHH-HHHHHHH-hCCeEEEecCc
Confidence 5899999998643 47777764 5667777 46666666553
No 274
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=61.11 E-value=13 Score=30.27 Aligned_cols=66 Identities=9% Similarity=0.121 Sum_probs=40.0
Q ss_pred cceeecCCchhHhHhhhhc--cccccccccccc--ccchhHHHHHHhHhcc----eeeeeecCCCCCC--CCcccEEEE
Q 030792 3 KVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI----VRVADIKFPLPYR--AKSFPLVIV 71 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke--e~teAWGVEPyd--~~d~d~~CksLv~kG~----VRvadikfpLPYR--~KSFslViv 71 (171)
+|||+|-++++.-..|.+. ...+..++|... ++.+..|++ +.|+ +..+|..-..+.- ..+||.|++
T Consensus 105 ~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~---r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 105 HVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLA---RAGVSCCELAEEDFLAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp EEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH---HTTCCSEEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred EEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH---HcCCCeEEEEeCChHhcCccccccCCCCEEEE
Confidence 6999988888877766653 346788887654 333444443 3353 3446653222221 157999986
No 275
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=58.47 E-value=40 Score=22.91 Aligned_cols=84 Identities=10% Similarity=0.043 Sum_probs=47.1
Q ss_pred EEEEcccccccChhhhhchhhhhhhhccCceEEEecCCCc-chhhhhh---hhhcCCCccccchhHHHHHHHHhccccch
Q 030792 68 LVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGYPGQ-QRAKVAE---LSKFGRPAKMRSSSWWIRYFVQTSLEENE 143 (171)
Q Consensus 68 lVivSDaLdyLsprylNkTlPeLaRvs~dgiVif~g~pgq-~~ak~~e---lskfgr~ak~RsssWW~r~F~q~~leeNe 143 (171)
.||+=|=+|.+++..+|.-+.-+-+.....++|+++.... -...+.. .-.|..+-.---..|..+.+.+.|+.-.+
T Consensus 104 ~vliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~ 183 (226)
T 2chg_A 104 KIIFLDEADALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITE 183 (226)
T ss_dssp EEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBCH
T ss_pred eEEEEeChhhcCHHHHHHHHHHHHhcCCCCeEEEEeCChhhcCHHHHHhCceeecCCCCHHHHHHHHHHHHHHcCCCCCH
Confidence 3555566899999887776666666566777787774332 1111110 11122222222346777777777777666
Q ss_pred HHHHHHHH
Q 030792 144 PAVKKFEQ 151 (171)
Q Consensus 144 a~~kkfeq 151 (171)
++...+.+
T Consensus 184 ~~~~~l~~ 191 (226)
T 2chg_A 184 DGLEALIY 191 (226)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655543
No 276
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=58.12 E-value=12 Score=33.22 Aligned_cols=67 Identities=13% Similarity=0.181 Sum_probs=44.6
Q ss_pred cceeecCCchhHhHhhhhc----ccccccccccccccchhHHHHHHhHhcc------eeeeeecCCC--C-CCCCcccEE
Q 030792 3 KVLHVGPDTCSVVSTLLKE----EETEAWGVEPYDIEDADARCKSLVHKGI------VRVADIKFPL--P-YRAKSFPLV 69 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke----e~teAWGVEPyd~~d~d~~CksLv~kG~------VRvadikfpL--P-YR~KSFslV 69 (171)
+||+-+-||++..-.+.+. .....+|+|.-... +.--.+.|.-.|+ ++.+|. +-. | .....||+|
T Consensus 224 ~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~-~~lA~~Nl~l~gi~~~~~~I~~gDt-L~~d~p~~~~~~fD~I 301 (542)
T 3lkd_A 224 TLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTST-YNLARMNMILHGVPIENQFLHNADT-LDEDWPTQEPTNFDGV 301 (542)
T ss_dssp EEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHH-HHHHHHHHHHTTCCGGGEEEEESCT-TTSCSCCSSCCCBSEE
T ss_pred EEeecccchhHHHHHHHHHHHhccCceEEEEECcHHH-HHHHHHHHHHcCCCcCccceEecce-ecccccccccccccEE
Confidence 6899999999887776644 25577888865433 2222345666776 677776 433 4 456789998
Q ss_pred EE
Q 030792 70 IV 71 (171)
Q Consensus 70 iv 71 (171)
|+
T Consensus 302 va 303 (542)
T 3lkd_A 302 LM 303 (542)
T ss_dssp EE
T ss_pred Ee
Confidence 85
No 277
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=51.24 E-value=11 Score=32.97 Aligned_cols=24 Identities=17% Similarity=0.284 Sum_probs=20.5
Q ss_pred ccceeecCCchhHhHhhhhccccc
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETE 25 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~te 25 (171)
++||-+|=|.|++++.+|+-...+
T Consensus 207 krVLIIGgGdG~~~revlkh~~~~ 230 (381)
T 3c6k_A 207 KDVLILGGGDGGILCEIVKLKPKM 230 (381)
T ss_dssp CEEEEEECTTCHHHHHHHTTCCSE
T ss_pred CeEEEECCCcHHHHHHHHhcCCce
Confidence 589999999999999999865433
No 278
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=50.96 E-value=7.7 Score=32.34 Aligned_cols=35 Identities=31% Similarity=0.553 Sum_probs=26.0
Q ss_pred hhhchhhhhhhhccCc-eEEEecCCCcchhhhhhhhhcC
Q 030792 82 YLNKTLPDLARVASDG-VLIFAGYPGQQRAKVAELSKFG 119 (171)
Q Consensus 82 ylNkTlPeLaRvs~dg-iVif~g~pgq~~ak~~elskfg 119 (171)
-+|+|+|.|.+.+.++ .||.+| |+-+=.. +|-++|
T Consensus 197 lvN~Tl~~lL~~~~~a~~vvl~G-PStp~~P--~lf~~G 232 (270)
T 3l5o_A 197 VVDKTLPRLLELSRNARRITLVG-PGTPLAP--VLFEHG 232 (270)
T ss_dssp HHHTCHHHHHHHTTTSSEEEEES-TTCCCCG--GGGGTT
T ss_pred hhcCCHHHHHhhCCCCCEEEEEC-CCchhhH--HHHhcC
Confidence 5899999999999876 788899 6655332 355555
No 279
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=48.82 E-value=6.1 Score=35.05 Aligned_cols=85 Identities=25% Similarity=0.286 Sum_probs=45.7
Q ss_pred cceeec--------CCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEccc
Q 030792 3 KVLHVG--------PDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDA 74 (171)
Q Consensus 3 kVLHvG--------P~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDa 74 (171)
+|||+| ||+ .|.++++ .+++-.-+|+.-|++. + .+..-++|... .+-...||+|| ||.
T Consensus 112 rVLDLGA~s~kg~APGS-~VLr~~~-p~g~~VVavDL~~~~s-d--------a~~~IqGD~~~--~~~~~k~DLVI-SDM 177 (344)
T 3r24_A 112 RVIHFGAGSDKGVAPGT-AVLRQWL-PTGTLLVDSDLNDFVS-D--------ADSTLIGDCAT--VHTANKWDLII-SDM 177 (344)
T ss_dssp EEEEESCCCTTSBCHHH-HHHHHHS-CTTCEEEEEESSCCBC-S--------SSEEEESCGGG--EEESSCEEEEE-ECC
T ss_pred EEEeCCCCCCCCCCCcH-HHHHHhC-CCCcEEEEeeCccccc-C--------CCeEEEccccc--cccCCCCCEEE-ecC
Confidence 699999 788 5666664 4433444444444431 1 11445667532 22347799887 565
Q ss_pred cccc---------Chhhhhchhhhhhh--hccCceEEE
Q 030792 75 LDYL---------SPKYLNKTLPDLAR--VASDGVLIF 101 (171)
Q Consensus 75 LdyL---------sprylNkTlPeLaR--vs~dgiVif 101 (171)
-.=+ +..||-...=|+|+ +...|-++.
T Consensus 178 APNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvV 215 (344)
T 3r24_A 178 YDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV 215 (344)
T ss_dssp CCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEE
Confidence 4322 23445555555554 555665543
No 280
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=48.58 E-value=10 Score=39.46 Aligned_cols=93 Identities=20% Similarity=0.158 Sum_probs=36.2
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccch--------hHHHHHHhHhcceeee--eecCCCCCCCCcccEEEEc
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDA--------DARCKSLVHKGIVRVA--DIKFPLPYRAKSFPLVIVS 72 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~--------d~~CksLv~kG~VRva--dikfpLPYR~KSFslVivS 72 (171)
+||.||.||++....+++.-+...-...-|...|. ...-+.| . +... |+.-|-|+-..+||+||++
T Consensus 1243 ~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---d-i~~~~~d~~~~~~~~~~~ydlvia~ 1318 (2512)
T 2vz8_A 1243 KVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---H-VTQGQWDPANPAPGSLGKADLLVCN 1318 (2512)
T ss_dssp EEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---T-EEEECCCSSCCCC-----CCEEEEE
T ss_pred eEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---c-cccccccccccccCCCCceeEEEEc
Confidence 68999999998877766443211111122444333 2233332 0 1110 2212235566789999999
Q ss_pred ccccccChhhhhchhhhhhhh-ccCceEEE
Q 030792 73 DALDYLSPKYLNKTLPDLARV-ASDGVLIF 101 (171)
Q Consensus 73 DaLdyLsprylNkTlPeLaRv-s~dgiVif 101 (171)
++| |-+ +.++.||-.+.++ ...|.+++
T Consensus 1319 ~vl-~~t-~~~~~~l~~~~~lL~p~G~l~~ 1346 (2512)
T 2vz8_A 1319 CAL-ATL-GDPAVAVGNMAATLKEGGFLLL 1346 (2512)
T ss_dssp CC----------------------CCEEEE
T ss_pred ccc-ccc-ccHHHHHHHHHHhcCCCcEEEE
Confidence 998 333 3567777776654 44555444
No 281
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=47.12 E-value=40 Score=25.13 Aligned_cols=93 Identities=13% Similarity=0.084 Sum_probs=51.1
Q ss_pred CCCCCCcccEEEEcccccccChhhhhchhhhhhhhccCceEEEecCCCc-chhhhhh---hhhcCCCccccchhHHHHHH
Q 030792 59 LPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGYPGQ-QRAKVAE---LSKFGRPAKMRSSSWWIRYF 134 (171)
Q Consensus 59 LPYR~KSFslVivSDaLdyLsprylNkTlPeLaRvs~dgiVif~g~pgq-~~ak~~e---lskfgr~ak~RsssWW~r~F 134 (171)
.|+......+| +-|=.|.|++...|.-+.-+-.-..+.++|+++.... -...+.+ .-.|..+-.---..|..+..
T Consensus 104 ~~~~~~~~~vl-iiDe~~~l~~~~~~~L~~~le~~~~~~~~i~~~~~~~~l~~~l~sr~~~~~~~~l~~~~~~~~l~~~~ 182 (327)
T 1iqp_A 104 KPIGGASFKII-FLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIA 182 (327)
T ss_dssp CCGGGCSCEEE-EEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHTEEEEECCCCCHHHHHHHHHHHH
T ss_pred CCcCCCCCeEE-EEeCCCcCCHHHHHHHHHHHHhcCCCCeEEEEeCCccccCHHHHhhCcEEEecCCCHHHHHHHHHHHH
Confidence 34443334444 4566899999988877766666667777888773322 1111110 11222222222235666666
Q ss_pred HHhccccchHHHHHHHHH
Q 030792 135 VQTSLEENEPAVKKFEQA 152 (171)
Q Consensus 135 ~q~~leeNea~~kkfeqa 152 (171)
.+.|+.-++++...+.+.
T Consensus 183 ~~~~~~~~~~~~~~l~~~ 200 (327)
T 1iqp_A 183 ENEGLELTEEGLQAILYI 200 (327)
T ss_dssp HTTTCEECHHHHHHHHHH
T ss_pred HhcCCCCCHHHHHHHHHH
Confidence 677776666666655443
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=45.77 E-value=13 Score=35.59 Aligned_cols=88 Identities=19% Similarity=0.183 Sum_probs=51.3
Q ss_pred cceeecCCchhHhHhhhhcc--------------cccccccccccccchhHHHHHHhHhc---ceee-----eeecCCC-
Q 030792 3 KVLHVGPDTCSVVSTLLKEE--------------ETEAWGVEPYDIEDADARCKSLVHKG---IVRV-----ADIKFPL- 59 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee--------------~teAWGVEPyd~~d~d~~CksLv~kG---~VRv-----adikfpL- 59 (171)
.||+||.||+-+|..-++-. ....|+||-.++-. ..-+..++.| .|.| -|++.|+
T Consensus 412 VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~--~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 412 VIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAI--VTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHH--HHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHH--HHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 49999999999986544332 23789999876432 1222222333 3433 3444421
Q ss_pred ---CCCCCcccEEEEcccccc-----cChhhhhchhhhhhh-hccCceEE
Q 030792 60 ---PYRAKSFPLVIVSDALDY-----LSPKYLNKTLPDLAR-VASDGVLI 100 (171)
Q Consensus 60 ---PYR~KSFslVivSDaLdy-----LsprylNkTlPeLaR-vs~dgiVi 100 (171)
| ...| ||||..|.| |+|+=|+..- | +..+|++|
T Consensus 490 ~~~~---ekVD-IIVSElmGsfl~nEL~pe~Ld~v~----r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGF---EQPD-IIVSELLGSFGDNELSPECLDGVT----GFLKPTTISI 531 (745)
T ss_dssp HTTC---CCCS-EEEECCCBTTBGGGSHHHHHHTTG----GGSCTTCEEE
T ss_pred cCCC---Cccc-EEEEeccccccchhccHHHHHHHH----HhCCCCcEEE
Confidence 3 3344 678999988 6667666652 3 34567654
No 283
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=45.31 E-value=48 Score=27.86 Aligned_cols=78 Identities=12% Similarity=0.101 Sum_probs=39.7
Q ss_pred ccccccccc--ccchhHHHHHHhHhcc-----eeeeeecCCCCCCCCcccEEEEcc--ccccc-Chhhhhchhhhhhhhc
Q 030792 25 EAWGVEPYD--IEDADARCKSLVHKGI-----VRVADIKFPLPYRAKSFPLVIVSD--ALDYL-SPKYLNKTLPDLARVA 94 (171)
Q Consensus 25 eAWGVEPyd--~~d~d~~CksLv~kG~-----VRvadikfpLPYR~KSFslVivSD--aLdyL-sprylNkTlPeLaRvs 94 (171)
..+|+|-.. ++-+..|+ -+.|+ +..+|+ +.+|.. .+||+||+ | .=+-| +...+.....+|.++-
T Consensus 258 ~v~GvDid~~al~~Ar~Na---~~~gl~~~I~~~~~D~-~~l~~~-~~fD~Iv~-NPPYG~rl~~~~~l~~ly~~lg~~l 331 (384)
T 3ldg_A 258 DISGFDFDGRMVEIARKNA---REVGLEDVVKLKQMRL-QDFKTN-KINGVLIS-NPPYGERLLDDKAVDILYNEMGETF 331 (384)
T ss_dssp CEEEEESCHHHHHHHHHHH---HHTTCTTTEEEEECCG-GGCCCC-CCSCEEEE-CCCCTTTTSCHHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHH---HHcCCCCceEEEECCh-HHCCcc-CCcCEEEE-CCchhhccCCHHHHHHHHHHHHHHH
Confidence 466666543 22233333 34453 456777 455553 58998774 3 10111 1123444444455444
Q ss_pred c----CceEEEecCCCcc
Q 030792 95 S----DGVLIFAGYPGQQ 108 (171)
Q Consensus 95 ~----dgiVif~g~pgq~ 108 (171)
+ -.+.|+++.+.-.
T Consensus 332 k~~~g~~~~iit~~~~l~ 349 (384)
T 3ldg_A 332 APLKTWSQFILTNDTDFE 349 (384)
T ss_dssp TTCTTSEEEEEESCTTHH
T ss_pred hhCCCcEEEEEECCHHHH
Confidence 3 3578888877644
No 284
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=44.91 E-value=42 Score=26.86 Aligned_cols=101 Identities=17% Similarity=0.081 Sum_probs=60.2
Q ss_pred CccceeecCCchhH--hHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCC-CcccEEEEcccccc
Q 030792 1 MHKVLHVGPDTCSV--VSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRA-KSFPLVIVSDALDY 77 (171)
Q Consensus 1 m~kVLHvGP~tC~v--Vs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~-KSFslVivSDaLdy 77 (171)
|++|+=+|=|--+. +.++|.+.+-+.-|.+-.+. ......|-+.|+--.-. ..+. --. ..+|+||+|-++..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~---~~~~~~L~~~gi~v~~g-~~~~-~l~~~~~d~vV~Spgi~~ 78 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY---PPMSTQLEALGIDVYEG-FDAA-QLDEFKADVYVIGNVAKR 78 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC---TTHHHHHHHTTCEEEES-CCGG-GGGSCCCSEEEECTTCCT
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC---cHHHHHHHhCCCEEECC-CCHH-HcCCCCCCEEEECCCcCC
Confidence 66777777765555 78899888888777654332 22345677778632211 1110 011 36899999999987
Q ss_pred cChhhhh---chh-----hhh-hh-hccC-ceEEEecCCC
Q 030792 78 LSPKYLN---KTL-----PDL-AR-VASD-GVLIFAGYPG 106 (171)
Q Consensus 78 LsprylN---kTl-----PeL-aR-vs~d-giVif~g~pg 106 (171)
=.|...- +-+ +|+ +| +..+ -+|..||--|
T Consensus 79 ~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnG 118 (326)
T 3eag_A 79 GMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHG 118 (326)
T ss_dssp TCHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSC
T ss_pred CCHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCC
Confidence 7775432 112 453 45 3333 4788888665
No 285
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=44.70 E-value=66 Score=28.05 Aligned_cols=94 Identities=15% Similarity=0.108 Sum_probs=58.3
Q ss_pred cceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhccee--eeeecCCCCCCCCcccEEEEcccccccCh
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVR--VADIKFPLPYRAKSFPLVIVSDALDYLSP 80 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VR--vadikfpLPYR~KSFslVivSDaLdyLsp 80 (171)
+|||+|-.+++--..|+ +.+....||++-+|+. .|..-+.|. .+|. |.+.-..+.||+| +||...+. .
T Consensus 214 ~vlDLGAaPGGWT~~l~-~rg~~V~aVD~~~l~~------~l~~~~~V~~~~~d~-~~~~~~~~~~D~v-vsDm~~~p-~ 283 (375)
T 4auk_A 214 WAVDLGACPGGWTYQLV-KRNMWVYSVDNGPMAQ------SLMDTGQVTWLREDG-FKFRPTRSNISWM-VCDMVEKP-A 283 (375)
T ss_dssp EEEEETCTTCHHHHHHH-HTTCEEEEECSSCCCH------HHHTTTCEEEECSCT-TTCCCCSSCEEEE-EECCSSCH-H
T ss_pred EEEEeCcCCCHHHHHHH-HCCCEEEEEEhhhcCh------hhccCCCeEEEeCcc-ccccCCCCCcCEE-EEcCCCCh-H
Confidence 58999998888887787 4577999999998873 344445443 3454 5554445789976 68988753 1
Q ss_pred hhhhchhhhhhhhccCceEEEecCCC
Q 030792 81 KYLNKTLPDLARVASDGVLIFAGYPG 106 (171)
Q Consensus 81 rylNkTlPeLaRvs~dgiVif~g~pg 106 (171)
+-+.-..+-|...-..+.|.-.=+|.
T Consensus 284 ~~~~l~~~wl~~~~~~~aI~~lKL~m 309 (375)
T 4auk_A 284 KVAALMAQWLVNGWCRETIFNLKLPM 309 (375)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEEECCS
T ss_pred HhHHHHHHHHhccccceEEEEEEecc
Confidence 22222223344444445544334665
No 286
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=43.48 E-value=63 Score=24.76 Aligned_cols=84 Identities=12% Similarity=0.092 Sum_probs=51.8
Q ss_pred EEEEcccccccChhhhhchhhhhhhhccCceEEEecC-CCcchhhhh---hhhhcCCCccccchhHHHHHHHHhccccch
Q 030792 68 LVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGY-PGQQRAKVA---ELSKFGRPAKMRSSSWWIRYFVQTSLEENE 143 (171)
Q Consensus 68 lVivSDaLdyLsprylNkTlPeLaRvs~dgiVif~g~-pgq~~ak~~---elskfgr~ak~RsssWW~r~F~q~~leeNe 143 (171)
.||+=|=.|.|++.-+|.-+.-|-+...+.++|+++. |..-...+. ..-.|..+-.---..|..+.+.+.|+.-++
T Consensus 121 ~vliiDe~~~l~~~~~~~Ll~~le~~~~~~~~Il~~~~~~~l~~~l~sr~~~i~~~~l~~~~~~~~l~~~~~~~~~~~~~ 200 (373)
T 1jr3_A 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEP 200 (373)
T ss_dssp EEEEEECGGGSCHHHHHHHHHHHHSCCSSEEEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBCH
T ss_pred EEEEEECcchhcHHHHHHHHHHHhcCCCceEEEEEeCChHhCcHHHHhheeEeeCCCCCHHHHHHHHHHHHHHcCCCCCH
Confidence 4555666899999999888877777777778888773 322111111 011233333333357888888888887777
Q ss_pred HHHHHHHH
Q 030792 144 PAVKKFEQ 151 (171)
Q Consensus 144 a~~kkfeq 151 (171)
++...+-+
T Consensus 201 ~a~~~l~~ 208 (373)
T 1jr3_A 201 RALQLLAR 208 (373)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655443
No 287
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=43.32 E-value=61 Score=21.03 Aligned_cols=94 Identities=12% Similarity=0.036 Sum_probs=48.6
Q ss_pred cceeecCCchh--HhHhhhhcccccccccccccccchhHHHHHHhHh-cc-eeeeeecCCCCC---CCCcccEEEEcccc
Q 030792 3 KVLHVGPDTCS--VVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-GI-VRVADIKFPLPY---RAKSFPLVIVSDAL 75 (171)
Q Consensus 3 kVLHvGP~tC~--vVs~llkee~teAWGVEPyd~~d~d~~CksLv~k-G~-VRvadikfpLPY---R~KSFslVivSDaL 75 (171)
+|+=+|-|..+ ++..|. +.+-+.+.++.. ...+..+.++ |+ +..+|..-+--. ..+.+|+||++
T Consensus 6 ~i~IiG~G~iG~~~a~~L~-~~g~~v~~~d~~-----~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~--- 76 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLS-EKGHDIVLIDID-----KDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAV--- 76 (140)
T ss_dssp EEEEECCSHHHHHHHHHHH-HTTCEEEEEESC-----HHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEEC---
T ss_pred EEEEECCCHHHHHHHHHHH-hCCCeEEEEECC-----HHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEe---
Confidence 56777877654 344444 455556665442 2346666554 65 233443211001 13467888876
Q ss_pred cccChhhhhchhhhhhhhcc-CceEEEecCCCc
Q 030792 76 DYLSPKYLNKTLPDLARVAS-DGVLIFAGYPGQ 107 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~-dgiVif~g~pgq 107 (171)
......|..+-+++|-.. ..+|+.+..|+.
T Consensus 77 --~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~ 107 (140)
T 1lss_A 77 --TGKEEVNLMSSLLAKSYGINKTIARISEIEY 107 (140)
T ss_dssp --CSCHHHHHHHHHHHHHTTCCCEEEECSSTTH
T ss_pred --eCCchHHHHHHHHHHHcCCCEEEEEecCHhH
Confidence 122356666666666544 345555545544
No 288
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=40.08 E-value=1.1e+02 Score=22.97 Aligned_cols=92 Identities=20% Similarity=0.252 Sum_probs=49.3
Q ss_pred CccceeecCCchh-HhHhhhhcccc--cccccccccccchhHHHHHHhHhcce-e-eeeecCCCCCCCC-cccEEEEccc
Q 030792 1 MHKVLHVGPDTCS-VVSTLLKEEET--EAWGVEPYDIEDADARCKSLVHKGIV-R-VADIKFPLPYRAK-SFPLVIVSDA 74 (171)
Q Consensus 1 m~kVLHvGP~tC~-vVs~llkee~t--eAWGVEPyd~~d~d~~CksLv~kG~V-R-vadikfpLPYR~K-SFslVivSDa 74 (171)
|.+|.=||-|.-+ .+.+.|...+- +.+++++.+ ..+..+.+.|+. + ..|+.- -.+ ..|+||.+
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~-----~~~~~~~~~g~~~~~~~~~~~----~~~~~aDvVila-- 69 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP-----ESISKAVDLGIIDEGTTSIAK----VEDFSPDFVMLS-- 69 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH-----HHHHHHHHTTSCSEEESCGGG----GGGTCCSEEEEC--
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH-----HHHHHHHHCCCcccccCCHHH----HhcCCCCEEEEc--
Confidence 7788889988743 23333434433 555554432 223445566764 1 223321 123 67888876
Q ss_pred ccccChhhhhchhhhhhh-hccCceEEEec-CCC
Q 030792 75 LDYLSPKYLNKTLPDLAR-VASDGVLIFAG-YPG 106 (171)
Q Consensus 75 LdyLsprylNkTlPeLaR-vs~dgiVif~g-~pg 106 (171)
+.|......+.++.. +..+.+|+.++ .++
T Consensus 70 ---vp~~~~~~v~~~l~~~l~~~~iv~~~~~~~~ 100 (281)
T 2g5c_A 70 ---SPVRTFREIAKKLSYILSEDATVTDQGSVKG 100 (281)
T ss_dssp ---SCHHHHHHHHHHHHHHSCTTCEEEECCSCCT
T ss_pred ---CCHHHHHHHHHHHHhhCCCCcEEEECCCCcH
Confidence 455555566666654 34566666544 444
No 289
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=39.93 E-value=69 Score=22.48 Aligned_cols=8 Identities=0% Similarity=-0.193 Sum_probs=3.7
Q ss_pred eeeeeecC
Q 030792 50 VRVADIKF 57 (171)
Q Consensus 50 VRvadikf 57 (171)
+-++|++.
T Consensus 9 ~~iSD~H~ 16 (228)
T 1uf3_A 9 LATSNPMG 16 (228)
T ss_dssp EEEECCTT
T ss_pred EEEeeccC
Confidence 34445544
No 290
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=37.85 E-value=91 Score=23.08 Aligned_cols=88 Identities=10% Similarity=0.146 Sum_probs=51.4
Q ss_pred CCCCCcccEEEEcccccccChhhhhchhhhhhhhccCceEEEecCCCcchhhhhhhh------hcCCCccccchhHHHHH
Q 030792 60 PYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGYPGQQRAKVAELS------KFGRPAKMRSSSWWIRY 133 (171)
Q Consensus 60 PYR~KSFslVivSDaLdyLsprylNkTlPeLaRvs~dgiVif~g~pgq~~ak~~els------kfgr~ak~RsssWW~r~ 133 (171)
|+......+||+ |=.|.|++.-.|.-+.-|-....+.++|+++..... -...+. .|..|-.---..|..+.
T Consensus 97 ~~~~~~~~vlii-De~~~l~~~~~~~L~~~le~~~~~~~~i~~~~~~~~--l~~~l~sr~~~i~~~~~~~~~~~~~l~~~ 173 (319)
T 2chq_A 97 PIGGAPFKIIFL-DEADALTADAQAALRRTMEMYSKSCRFILSCNYVSR--IIEPIQSRCAVFRFKPVPKEAMKKRLLEI 173 (319)
T ss_dssp CSSSCCCEEEEE-ETGGGSCHHHHHTTGGGTSSSSSSEEEEEEESCGGG--SCHHHHTTCEEEECCCCCHHHHHHHHHHH
T ss_pred CCCCCCceEEEE-eCCCcCCHHHHHHHHHHHHhcCCCCeEEEEeCChhh--cchHHHhhCeEEEecCCCHHHHHHHHHHH
Confidence 444344555555 557999998877776666666677888888743321 111121 12222222224677778
Q ss_pred HHHhccccchHHHHHHH
Q 030792 134 FVQTSLEENEPAVKKFE 150 (171)
Q Consensus 134 F~q~~leeNea~~kkfe 150 (171)
+.+.|+.-++++...+.
T Consensus 174 ~~~~~~~i~~~~l~~l~ 190 (319)
T 2chq_A 174 CEKEGVKITEDGLEALI 190 (319)
T ss_dssp HHTTCCCBCHHHHHHHH
T ss_pred HHHcCCCCCHHHHHHHH
Confidence 88888876666665554
No 291
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=37.18 E-value=1e+02 Score=22.88 Aligned_cols=82 Identities=6% Similarity=0.101 Sum_probs=49.1
Q ss_pred EEEEcccccccChhhhhchhhhhhhhccCceEEEecCCCcchhhhhhhh------hcCCCccccchhHHHHHHHHhcccc
Q 030792 68 LVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGYPGQQRAKVAELS------KFGRPAKMRSSSWWIRYFVQTSLEE 141 (171)
Q Consensus 68 lVivSDaLdyLsprylNkTlPeLaRvs~dgiVif~g~pgq~~ak~~els------kfgr~ak~RsssWW~r~F~q~~lee 141 (171)
.||+=|=.|.|++...|.-+.-|-.-..+.++|+++.+... -...+. .|..|-.---..|..+.+.+.|+.-
T Consensus 109 ~viiiDe~~~l~~~~~~~L~~~le~~~~~~~~il~~~~~~~--l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~~~~~~~~ 186 (323)
T 1sxj_B 109 KIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNK--IIEPLQSQCAILRYSKLSDEDVLKRLLQIIKLEDVKY 186 (323)
T ss_dssp EEEEEESGGGSCHHHHHTTHHHHHHTTTTEEEEEEESCGGG--SCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCB
T ss_pred eEEEEECcccCCHHHHHHHHHHHhccCCCceEEEEeCChhh--chhHHHhhceEEeecCCCHHHHHHHHHHHHHHcCCCC
Confidence 34455667999998888777777666777888888744221 111221 2333333333567777777777776
Q ss_pred chHHHHHHHH
Q 030792 142 NEPAVKKFEQ 151 (171)
Q Consensus 142 Nea~~kkfeq 151 (171)
++++...+-+
T Consensus 187 ~~~~~~~l~~ 196 (323)
T 1sxj_B 187 TNDGLEAIIF 196 (323)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6665554443
No 292
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=36.92 E-value=16 Score=32.88 Aligned_cols=49 Identities=24% Similarity=0.352 Sum_probs=38.7
Q ss_pred eeeeeecC--C---CCCCCCcccEEEEcccccccChhhhhchhhhhhhhccCceEEEec
Q 030792 50 VRVADIKF--P---LPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 103 (171)
Q Consensus 50 VRvadikf--p---LPYR~KSFslVivSDaLdyLsprylNkTlPeLaRvs~dgiVif~g 103 (171)
+|||.+.. + +||=---| .+.++|||-..|-.|+-|.|-.-++||||--+
T Consensus 251 ~Rva~~~~~~~lPV~~Y~r~~Y-----~~~~~fLS~~DL~~TigesaalGa~GiViWGs 304 (424)
T 2pe4_A 251 FRVAVAAGDPNLPVLPYVQIFY-----DTTNHFLPLDELEHSLGESAAQGAAGVVLWVS 304 (424)
T ss_dssp HHHHHHTTCTTCCBCCEECSBC-----BTSCCBCCHHHHHTTHHHHHHTTCSEEEEECC
T ss_pred HHHHhccCCCCCceEEEEeeEe-----cCccccccHHHHHHHHHHHHHcCCCeEEEecc
Confidence 57776622 2 55544333 58889999999999999999999999999866
No 293
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=36.59 E-value=1.4e+02 Score=22.67 Aligned_cols=87 Identities=8% Similarity=0.077 Sum_probs=51.0
Q ss_pred cccEEEEcccccccChhhhhchhhhhhhhccCceEEEec-CCCcchhhhhh---hhhcCCCccccchhHHHHHHHHhccc
Q 030792 65 SFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG-YPGQQRAKVAE---LSKFGRPAKMRSSSWWIRYFVQTSLE 140 (171)
Q Consensus 65 SFslVivSDaLdyLsprylNkTlPeLaRvs~dgiVif~g-~pgq~~ak~~e---lskfgr~ak~RsssWW~r~F~q~~le 140 (171)
.+.+||. |=.|.|+++..|.-+.-+-....+..+|+++ .|...-..+.+ .-.|..+-.---..|..+.+.+.|+.
T Consensus 133 ~~~vlii-DE~~~l~~~~~~~Ll~~le~~~~~~~~il~~~~~~~l~~~l~sR~~~i~~~~~~~~~~~~~l~~~~~~~~~~ 211 (353)
T 1sxj_D 133 PYKIIIL-DEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFRFKALDASNAIDRLRFISEQENVK 211 (353)
T ss_dssp SCEEEEE-TTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHHSEEEECCCCCHHHHHHHHHHHHHTTTCC
T ss_pred CceEEEE-ECCCccCHHHHHHHHHHHHhcCCCceEEEEeCchhhCcchhhccCceEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence 4555555 5589999988887777776666777677766 44322111111 11233333333456777777777776
Q ss_pred cchHHHHHHHHH
Q 030792 141 ENEPAVKKFEQA 152 (171)
Q Consensus 141 eNea~~kkfeqa 152 (171)
-++.+...+.+.
T Consensus 212 i~~~~l~~l~~~ 223 (353)
T 1sxj_D 212 CDDGVLERILDI 223 (353)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 666666555443
No 294
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Probab=35.63 E-value=24 Score=29.42 Aligned_cols=47 Identities=11% Similarity=0.026 Sum_probs=26.2
Q ss_pred CCCCCCCCcccEEEEcccccccChhhhhchhhhhhhhc-cCceEEEecCCCcchhhh
Q 030792 57 FPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAGYPGQQRAKV 112 (171)
Q Consensus 57 fpLPYR~KSFslVivSDaLdyLsprylNkTlPeLaRvs-~dgiVif~g~pgq~~ak~ 112 (171)
++.|||+.+|+ -|+|.|-...---+.-+. .++.++++|.||-=|..+
T Consensus 14 ~~~~~~p~~~~---------~Ln~~Q~~av~~~~~~i~~~~~~~li~G~aGTGKT~l 61 (459)
T 3upu_A 14 LVPRGSHMTFD---------DLTEGQKNAFNIVMKAIKEKKHHVTINGPAGTGATTL 61 (459)
T ss_dssp -------CCSS---------CCCHHHHHHHHHHHHHHHSSSCEEEEECCTTSCHHHH
T ss_pred CccccCCCccc---------cCCHHHHHHHHHHHHHHhcCCCEEEEEeCCCCCHHHH
Confidence 67899999984 478888765432222222 356999999999876543
No 295
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=35.47 E-value=1.1e+02 Score=21.77 Aligned_cols=87 Identities=21% Similarity=0.286 Sum_probs=54.2
Q ss_pred ccceeecC----Cc-hhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEccccc
Q 030792 2 HKVLHVGP----DT-CSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 2 ~kVLHvGP----~t-C~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
++|.=||- ++ .+.+.+-|++.+.+.|.|.|-...+ .+ .|+--..++ -.+|- .-|+|++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~------~i--~G~~~~~sl-~el~~---~vDlavi----- 76 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGE------EL--FGEEAVASL-LDLKE---PVDILDV----- 76 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTS------EE--TTEECBSSG-GGCCS---CCSEEEE-----
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccC------cC--CCEEecCCH-HHCCC---CCCEEEE-----
Confidence 34555665 22 4455555557777899988863111 01 244333334 24453 4677776
Q ss_pred ccChhhhhchhhhhhhhccCceEEEecCC
Q 030792 77 YLSPKYLNKTLPDLARVASDGVLIFAGYP 105 (171)
Q Consensus 77 yLsprylNkTlPeLaRvs~dgiVif~g~p 105 (171)
++.+...-.++-|+++.-..++++++|..
T Consensus 77 ~vp~~~~~~v~~~~~~~gi~~i~~~~g~~ 105 (140)
T 1iuk_A 77 FRPPSALMDHLPEVLALRPGLVWLQSGIR 105 (140)
T ss_dssp CSCHHHHTTTHHHHHHHCCSCEEECTTCC
T ss_pred EeCHHHHHHHHHHHHHcCCCEEEEcCCcC
Confidence 46778888888888888888999988876
No 296
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=34.94 E-value=61 Score=26.50 Aligned_cols=136 Identities=11% Similarity=0.135 Sum_probs=76.5
Q ss_pred ccceeecCCchhHhHhhhhcccccccccccccccch--hHHHHHHhH------hcceee--eeecC----CCC---CCCC
Q 030792 2 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDA--DARCKSLVH------KGIVRV--ADIKF----PLP---YRAK 64 (171)
Q Consensus 2 ~kVLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~--d~~CksLv~------kG~VRv--adikf----pLP---YR~K 64 (171)
+.|+++|-|-..-.-+|...+ |+.-|+++++ -..-+.++. .+..+. +|+.- .|. +...
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~-----~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPT-----GTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCT-----TCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CeEEEeCCCCCchhhhccCCC-----CcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 357777777766665554211 2444566553 233344554 232222 34321 010 1222
Q ss_pred cccEEEEcccccccChhhhhchhhhhhhhccCc-eEEEecCCCc-c------hhhh-hhhhhcC-------CCcccc-c-
Q 030792 65 SFPLVIVSDALDYLSPKYLNKTLPDLARVASDG-VLIFAGYPGQ-Q------RAKV-AELSKFG-------RPAKMR-S- 126 (171)
Q Consensus 65 SFslVivSDaLdyLsprylNkTlPeLaRvs~dg-iVif~g~pgq-~------~ak~-~elskfg-------r~ak~R-s- 126 (171)
.=.++|.--+|-||+|...+..+-.++..+..| .++|.-.+.. . +.-+ ..+.+.| .+...+ +
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 258 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDALGFEQAVDVQELIYHDEN 258 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSHHHHHHHHHHHHHHC-----------CCTTCCTT
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcchhHHHHHHHHHHHHHcCCcCCCCccccccCCCC
Confidence 346888889999999999999999999876554 4555544432 1 1122 3455566 455554 4
Q ss_pred hhHHHHHHHHhccccc
Q 030792 127 SSWWIRYFVQTSLEEN 142 (171)
Q Consensus 127 ssWW~r~F~q~~leeN 142 (171)
..=-.++|.+.|++..
T Consensus 259 ~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 259 RAVVADWLNRHGWRAT 274 (310)
T ss_dssp CCCHHHHHTTTTEEEE
T ss_pred hHHHHHHHHHCcCccc
Confidence 4667899999998754
No 297
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=33.66 E-value=18 Score=30.68 Aligned_cols=29 Identities=17% Similarity=0.093 Sum_probs=22.0
Q ss_pred cceeecCCchhHhHhhhhcc-ccccccccc
Q 030792 3 KVLHVGPDTCSVVSTLLKEE-ETEAWGVEP 31 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee-~teAWGVEP 31 (171)
.||.||||.+..-..|++.. .....-||.
T Consensus 61 ~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~ 90 (353)
T 1i4w_A 61 KVLDLYPGVGIQSAIFYNKYCPRQYSLLEK 90 (353)
T ss_dssp EEEEESCTTCHHHHHHHHHHCCSEEEEECC
T ss_pred EEEEECCCCCHHHHHHHhhCCCCEEEEEec
Confidence 59999999999999999643 345555553
No 298
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=33.23 E-value=56 Score=27.18 Aligned_cols=79 Identities=14% Similarity=0.236 Sum_probs=38.9
Q ss_pred ccccccccc--ccchhHHHHHHhHhcc-----eeeeeecCCCCCCCCcccEEEEccc-ccccC-hhhhhchhhhhhhhc-
Q 030792 25 EAWGVEPYD--IEDADARCKSLVHKGI-----VRVADIKFPLPYRAKSFPLVIVSDA-LDYLS-PKYLNKTLPDLARVA- 94 (171)
Q Consensus 25 eAWGVEPyd--~~d~d~~CksLv~kG~-----VRvadikfpLPYR~KSFslVivSDa-LdyLs-prylNkTlPeLaRvs- 94 (171)
...|+|... ++-+..|++ ..|+ +..+|+ +.+|. +.+||+||+-=- -+.+. .+.+.+...+|.++-
T Consensus 259 ~V~GvDid~~ai~~Ar~Na~---~~gl~~~i~~~~~D~-~~l~~-~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk 333 (385)
T 3ldu_A 259 KIYGYDIDEESIDIARENAE---IAGVDEYIEFNVGDA-TQFKS-EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFR 333 (385)
T ss_dssp CEEEEESCHHHHHHHHHHHH---HHTCGGGEEEEECCG-GGCCC-SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHH---HcCCCCceEEEECCh-hhcCc-CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHh
Confidence 456665443 222334433 3343 455777 44543 458998876210 11111 223344444444433
Q ss_pred ---cCceEEEecCCCcc
Q 030792 95 ---SDGVLIFAGYPGQQ 108 (171)
Q Consensus 95 ---~dgiVif~g~pgq~ 108 (171)
.-.+.|+++.+.-.
T Consensus 334 ~~~g~~~~iit~~~~l~ 350 (385)
T 3ldu_A 334 KLKNWSYYLITSYEDFE 350 (385)
T ss_dssp TSBSCEEEEEESCTTHH
T ss_pred hCCCCEEEEEECCHHHH
Confidence 34677888877644
No 299
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=33.23 E-value=1.4e+02 Score=22.84 Aligned_cols=86 Identities=12% Similarity=0.159 Sum_probs=46.9
Q ss_pred CccceeecC-Cchh--HhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccc
Q 030792 1 MHKVLHVGP-DTCS--VVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 77 (171)
Q Consensus 1 m~kVLHvGP-~tC~--vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdy 77 (171)
|.+|.=||- |.-+ +...|. ..+-+..++++. ...+..+.+.| +++.|. .=-.+..|+||.+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~-~~g~~V~~~~r~-----~~~~~~~~~~g-~~~~~~----~~~~~~aDvVi~a----- 74 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIH-DSAHHLAAIEIA-----PEGRDRLQGMG-IPLTDG----DGWIDEADVVVLA----- 74 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-HSSSEEEEECCS-----HHHHHHHHHTT-CCCCCS----SGGGGTCSEEEEC-----
T ss_pred CCEEEEECCCCHHHHHHHHHHH-hCCCEEEEEECC-----HHHHHHHHhcC-CCcCCH----HHHhcCCCEEEEc-----
Confidence 357888998 8643 445555 444444444332 22344555567 333322 1113467888875
Q ss_pred cChhhhhchhhhhhhh-ccCceEEEe
Q 030792 78 LSPKYLNKTLPDLARV-ASDGVLIFA 102 (171)
Q Consensus 78 LsprylNkTlPeLaRv-s~dgiVif~ 102 (171)
+.|..+...+.++... ..+.+||.+
T Consensus 75 v~~~~~~~v~~~l~~~l~~~~ivv~~ 100 (286)
T 3c24_A 75 LPDNIIEKVAEDIVPRVRPGTIVLIL 100 (286)
T ss_dssp SCHHHHHHHHHHHGGGSCTTCEEEES
T ss_pred CCchHHHHHHHHHHHhCCCCCEEEEC
Confidence 4555666677777654 445666643
No 300
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=33.08 E-value=20 Score=29.66 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=37.2
Q ss_pred HhcceeeeeecCCCCCCCCcccEEEEcccccccChh----------hhhchhhhhhhhccCc-eEEEecCCC
Q 030792 46 HKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK----------YLNKTLPDLARVASDG-VLIFAGYPG 106 (171)
Q Consensus 46 ~kG~VRvadikfpLPYR~KSFslVivSDaLdyLspr----------ylNkTlPeLaRvs~dg-iVif~g~pg 106 (171)
+..-|+|-|..-. .. ++-.|+.+|+.|+ -+|+|+++|...+.++ .||+.|--.
T Consensus 159 ~~~~v~V~d~~p~----~g----~~p~~~~e~ll~~aD~viiTGsTlvN~Ti~~lL~~~~~a~~vvl~GPS~ 222 (270)
T 2h1q_A 159 PICDLSILEWSPE----EG----DYPLPASEFILPECDYVYITCASVVDKTLPRLLELSRNARRITLVGPGT 222 (270)
T ss_dssp TTSEEEEEESSCC----TT----CEEGGGHHHHGGGCSEEEEETHHHHHTCHHHHHHHTTTSSEEEEESTTC
T ss_pred CCCCEEEEECCCC----CC----CCChHHHHHHhhcCCEEEEEeeeeecCCHHHHHHhCccCCeEEEEecCh
Confidence 3345677776422 11 2356778887775 5899999999999888 899998443
No 301
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=32.50 E-value=21 Score=31.37 Aligned_cols=67 Identities=10% Similarity=-0.017 Sum_probs=37.9
Q ss_pred cceeecCCchhHhHhhhhc---c----------------cccccccccccccchhHHH-HHHhHhcc---------eeee
Q 030792 3 KVLHVGPDTCSVVSTLLKE---E----------------ETEAWGVEPYDIEDADARC-KSLVHKGI---------VRVA 53 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke---e----------------~teAWGVEPyd~~d~d~~C-ksLv~kG~---------VRva 53 (171)
+|||.+-||++..-.+.+. . ....+|+|..+.. -+-| +.|.-.|+ ++.+
T Consensus 172 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~--~~lA~~nl~l~gi~~~~~~~~~I~~g 249 (541)
T 2ar0_A 172 VVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGT--RRLALMNCLLHDIEGNLDHGGAIRLG 249 (541)
T ss_dssp CEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHH--HHHHHHHHHTTTCCCBGGGTBSEEES
T ss_pred eEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHH--HHHHHHHHHHhCCCccccccCCeEeC
Confidence 6999999999876555432 1 2357888764432 2233 34444553 4556
Q ss_pred eecCCCCCCCCcccEEEE
Q 030792 54 DIKFPLPYRAKSFPLVIV 71 (171)
Q Consensus 54 dikfpLPYR~KSFslViv 71 (171)
|.-...+.....||+||+
T Consensus 250 DtL~~~~~~~~~fD~Vv~ 267 (541)
T 2ar0_A 250 NTLGSDGENLPKAHIVAT 267 (541)
T ss_dssp CTTSHHHHTSCCEEEEEE
T ss_pred CCcccccccccCCeEEEE
Confidence 642211233467888775
No 302
>3g2e_A OORC subunit of 2-oxoglutarate:acceptor oxidoredu; structural genomics, PSI-2, protein structure initiative; 2.00A {Campylobacter jejuni}
Probab=32.27 E-value=35 Score=26.07 Aligned_cols=82 Identities=13% Similarity=0.255 Sum_probs=49.4
Q ss_pred cceeecCCchhHh------HhhhhcccccccccccccccchhHHHHHHhHhc-----ceeeeeecCCCCC-CCCcccEEE
Q 030792 3 KVLHVGPDTCSVV------STLLKEEETEAWGVEPYDIEDADARCKSLVHKG-----IVRVADIKFPLPY-RAKSFPLVI 70 (171)
Q Consensus 3 kVLHvGP~tC~vV------s~llkee~teAWGVEPyd~~d~d~~CksLv~kG-----~VRvadikfpLPY-R~KSFslVi 70 (171)
.++=.|.|-=++| .+....++..+-+.+-|.++ ++| -||++|=...-|| .....|+|+
T Consensus 6 ~i~i~G~GGqGvvta~~iLa~aa~~~G~~v~~~~~yg~~----------~RGG~~~s~vRis~~~I~sp~i~~g~~D~lv 75 (194)
T 3g2e_A 6 QLRFGGEGGQGVITAGEILAEAAIKEGRQAFKASTYTSQ----------VRGGPTKVDIIIDDKEILFPYAVEGEVDFML 75 (194)
T ss_dssp EEEEEEC--CTHHHHHHHHHHHHHHTTCEEEEEEEEESS----------SSCCSEEEEEEEESSCCSSCSCCTTCEEEEE
T ss_pred EEEEEEeCchhHHHHHHHHHHHHHHcCCcEEEeeccChh----------hcCCeEEEEEEEeCCcccCcccCCCCCCEEE
Confidence 3444555544433 23334677778888888877 334 4788874444555 233789999
Q ss_pred EcccccccChhhhhchhhhhhhhccCceEEEec
Q 030792 71 VSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 103 (171)
Q Consensus 71 vSDaLdyLsprylNkTlPeLaRvs~dgiVif~g 103 (171)
+-|... +++. +.++..+|+||.-.
T Consensus 76 ~~d~~~------~~~~---~~~l~~gg~vi~ns 99 (194)
T 3g2e_A 76 STADKG------YKGF---RGGVKEGGIIVVEP 99 (194)
T ss_dssp ECCHHH------HHHH---GGGEEEEEEEEECT
T ss_pred EcCHHH------HHHH---HhccCCCeEEEEeC
Confidence 977554 3443 34567888888765
No 303
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=31.14 E-value=32 Score=27.09 Aligned_cols=49 Identities=22% Similarity=0.062 Sum_probs=32.0
Q ss_pred cceeecCCchhHhHhhhhccccccccccccc--ccchhHHHHHHhHhcceee
Q 030792 3 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRV 52 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llkee~teAWGVEPyd--~~d~d~~CksLv~kG~VRv 52 (171)
.|||.+-||+++.-.+.+ .+...+|||..+ ++.+..+++.......+.+
T Consensus 238 ~vlD~f~GsGt~~~~a~~-~g~~~~g~e~~~~~~~~a~~r~~~~~~~~~~~~ 288 (297)
T 2zig_A 238 VVLDPFAGTGTTLIAAAR-WGRRALGVELVPRYAQLAKERFAREVPGFSLEV 288 (297)
T ss_dssp EEEETTCTTTHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEE
T ss_pred EEEECCCCCCHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHHHhccccchhh
Confidence 589998888887777664 457899998765 3445555555443333333
No 304
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=30.85 E-value=25 Score=28.57 Aligned_cols=40 Identities=8% Similarity=0.230 Sum_probs=25.9
Q ss_pred cccChhhhhchhhhhhhhccCceEEEe-cCCCcchhhhhhh
Q 030792 76 DYLSPKYLNKTLPDLARVASDGVLIFA-GYPGQQRAKVAEL 115 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~dgiVif~-g~pgq~~ak~~el 115 (171)
++..|+..-..+-|+++--..++|+++ |+|.++..++.+.
T Consensus 77 i~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~ 117 (297)
T 2yv2_A 77 VFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNY 117 (297)
T ss_dssp ECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHH
T ss_pred EecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH
Confidence 467777777777777777777666655 5766554444443
No 305
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=29.63 E-value=1.1e+02 Score=22.95 Aligned_cols=86 Identities=15% Similarity=0.124 Sum_probs=51.3
Q ss_pred EEEccccccc---------ChhhhhchhhhhhhhccCceEEEecCCCcchhhh----hhhhhcCCCcccc------chhH
Q 030792 69 VIVSDALDYL---------SPKYLNKTLPDLARVASDGVLIFAGYPGQQRAKV----AELSKFGRPAKMR------SSSW 129 (171)
Q Consensus 69 VivSDaLdyL---------sprylNkTlPeLaRvs~dgiVif~g~pgq~~ak~----~elskfgr~ak~R------sssW 129 (171)
||.=|=+|.| +++-+|.-+.-|-.-..+.+||+++.+.....-. +=.+.|+..+.+. -...
T Consensus 133 vl~iDEid~l~~~~~~~~~~~~~~~~Ll~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~R~~~~i~~~~~~~~~~~~i 212 (309)
T 3syl_A 133 VLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNRDDLVVILAGYADRMENFFQSNPGFRSRIAHHIEFPDYSDEELFEI 212 (309)
T ss_dssp EEEEETGGGSCCCC---CCTHHHHHHHHHHHHHCTTTCEEEEEECHHHHHHHHHHSTTHHHHEEEEEEECCCCHHHHHHH
T ss_pred EEEEEChhhhccCCCcccccHHHHHHHHHHHhcCCCCEEEEEeCChHHHHHHHhhCHHHHHhCCeEEEcCCcCHHHHHHH
Confidence 5555667777 6777777777776666778999999765321110 1112222222221 2346
Q ss_pred HHHHHHHhccccchHHHHHHHHHHh
Q 030792 130 WIRYFVQTSLEENEPAVKKFEQAAS 154 (171)
Q Consensus 130 W~r~F~q~~leeNea~~kkfeqa~~ 154 (171)
|.++..+.++.-++.+...+.+...
T Consensus 213 l~~~l~~~~~~~~~~~~~~l~~~~~ 237 (309)
T 3syl_A 213 AGHMLDDQNYQMTPEAETALRAYIG 237 (309)
T ss_dssp HHHHHHHTTCEECHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 7777778888878877777666543
No 306
>1z63_A Helicase of the SNF2/RAD54 hamily; protein-DNA complex, hydrolase/DNA complex complex; 3.00A {Sulfolobus solfataricus} SCOP: c.37.1.19 c.37.1.19 PDB: 1z6a_A
Probab=28.41 E-value=80 Score=25.69 Aligned_cols=86 Identities=13% Similarity=0.212 Sum_probs=50.3
Q ss_pred CcccEEEEcccccccChhhhhchhhhhhhhccCceEEEecCCCcchh-hhhhhhhcCCCccccchhHHHHHHHHhccccc
Q 030792 64 KSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGYPGQQRA-KVAELSKFGRPAKMRSSSWWIRYFVQTSLEEN 142 (171)
Q Consensus 64 KSFslVivSDaLdyLsprylNkTlPeLaRvs~dgiVif~g~pgq~~a-k~~elskfgr~ak~RsssWW~r~F~q~~leeN 142 (171)
..|++||+ |=-.++.... .++.-.+.++.+...+++||-|-|.+. .+-.+-.|-+|-.+.+...|.+.|...--..+
T Consensus 148 ~~~~~vIv-DEaH~~kn~~-~~~~~~l~~l~~~~~l~LTaTP~~n~~~el~~ll~~l~p~~~~~~~~f~~~~~~~~~~~~ 225 (500)
T 1z63_A 148 VEWKYIVI-DEAQNIKNPQ-TKIFKAVKELKSKYRIALTGTPIENKVDDLWSIMTFLNPGLLGSYSEFKSKFATPIKKGD 225 (500)
T ss_dssp CCEEEEEE-ETGGGGSCTT-SHHHHHHHTSCEEEEEEECSSCSTTCHHHHHHHHHHHSTTTTCCHHHHHTTTHHHHHTTC
T ss_pred CCcCEEEE-eCccccCCHh-HHHHHHHHhhccCcEEEEecCCCCCCHHHHHHHHHHhCCCcCCCHHHHHHHhcccccccc
Confidence 35677666 3334443211 122233444567788999999988643 34556678888888888888877765322233
Q ss_pred hHHHHHHHH
Q 030792 143 EPAVKKFEQ 151 (171)
Q Consensus 143 ea~~kkfeq 151 (171)
......+.+
T Consensus 226 ~~~~~~l~~ 234 (500)
T 1z63_A 226 NMAKEELKA 234 (500)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333344433
No 307
>1yg2_A Gene activator APHA; virulence factor, winged helix, transcripti factor, transcription; 2.20A {Vibrio cholerae} SCOP: a.4.5.61
Probab=28.37 E-value=26 Score=25.85 Aligned_cols=49 Identities=12% Similarity=0.082 Sum_probs=38.8
Q ss_pred ceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeee
Q 030792 4 VLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADI 55 (171)
Q Consensus 4 VLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadi 55 (171)
+|.-||-+.+=+.+.+++.....|++.+-. .-..-+.|.++|+|.....
T Consensus 10 lL~~~~~~gyel~~~l~~~~~~~~~~s~~~---ly~~L~~Le~~GlI~~~~~ 58 (179)
T 1yg2_A 10 VLSTRDATGYDITKEFSASIGYFWKASHQQ---VYRELNKMGEQGLVTCVLE 58 (179)
T ss_dssp HHHHCCBCHHHHHHHHTTGGGGTCCCCHHH---HHHHHHHHHHTTSEEECCC
T ss_pred HHhcCCCCHHHHHHHHHHHhCCccCCCcCc---HHHHHHHHHHCCCeEEEee
Confidence 355589999988888877777788888755 4578899999999987544
No 308
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=28.30 E-value=25 Score=27.10 Aligned_cols=61 Identities=15% Similarity=0.101 Sum_probs=36.4
Q ss_pred ccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccChhhhhch
Q 030792 26 AWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPKYLNKT 86 (171)
Q Consensus 26 AWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLsprylNkT 86 (171)
..|++|.....+.+-++.|+.+|+|.......+---|.+-+.|-+-.|-+..---+|.|.|
T Consensus 312 ~~g~~~~~~~~~~~~l~~L~~~gli~~~~~~~g~~g~~~~~~l~~~~~~v~~~l~~~~~~~ 372 (384)
T 2qby_B 312 KFKQKPLSYRRFSDIISELDMFGIVKIRIINRGRAGGVKKYALVEDKEKVLRALNETFEDS 372 (384)
T ss_dssp HTTCCCCCHHHHHHHHHHHHHTTSEEEEEECCTTTTCCEEEEEESSSHHHHHHHHHHHHHS
T ss_pred HcCCCCCCHHHHHHHHHHHHhCCCEEEEeccCCCCCceEEEEecCCHHHHHHHHHHHhhhc
Confidence 4677787777889999999999999987653332112233444433333222233355443
No 309
>3f8b_A Transcriptional regulator, PADR-like family; winged helix turn helix, transcription regulator; 2.00A {Lactococcus lactis subsp} SCOP: a.4.5.0 PDB: 3f8c_A* 3f8f_A*
Probab=28.14 E-value=20 Score=25.09 Aligned_cols=49 Identities=18% Similarity=0.126 Sum_probs=37.8
Q ss_pred ceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeee
Q 030792 4 VLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADI 55 (171)
Q Consensus 4 VLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadi 55 (171)
+|.-||-+.+-+.+-+++.....|++.+..+ -..-+.|.++|+|+....
T Consensus 20 ~L~~~~~~Gyei~~~l~~~~~~~~~i~~gtl---y~~L~rLe~~GlI~~~~~ 68 (116)
T 3f8b_A 20 VLKQGDNYVYGIIKQVKEASNGEMELNEATL---YTIFKRLEKDGIISSYWG 68 (116)
T ss_dssp HHHHCCBCHHHHHHHHHHHTTTCCCCCHHHH---HHHHHHHHHTTSEEEEEE
T ss_pred HHHhCCCCHHHHHHHHHHHhCCCCCCCcchH---HHHHHHHHHCCCEEEEee
Confidence 3455888888888888777777888887654 477889999999987543
No 310
>3idw_A Actin cytoskeleton-regulatory complex protein SLA; clathrin adaptor, endocytosis, SAM domain, yeast, actin-BIND membrane, endosome; 1.85A {Saccharomyces cerevisiae}
Probab=27.92 E-value=23 Score=25.09 Aligned_cols=16 Identities=13% Similarity=0.650 Sum_probs=14.0
Q ss_pred HHHHHHHhccccchHH
Q 030792 130 WIRYFVQTSLEENEPA 145 (171)
Q Consensus 130 W~r~F~q~~leeNea~ 145 (171)
|.+||..+|+..|-+.
T Consensus 5 Wf~FFl~aGv~~~~c~ 20 (72)
T 3idw_A 5 WFEFFLNCGVDVSNCQ 20 (72)
T ss_dssp HHHHHHHTTCCHHHHH
T ss_pred HHHHHHHcCCChHHHH
Confidence 9999999999987654
No 311
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=27.19 E-value=57 Score=28.77 Aligned_cols=68 Identities=15% Similarity=0.101 Sum_probs=40.2
Q ss_pred cceeecCCchhHhHhhhhc---c-------------cccccccccccccchhHHHHHHhHhcc---e--eeeeecCCCCC
Q 030792 3 KVLHVGPDTCSVVSTLLKE---E-------------ETEAWGVEPYDIEDADARCKSLVHKGI---V--RVADIKFPLPY 61 (171)
Q Consensus 3 kVLHvGP~tC~vVs~llke---e-------------~teAWGVEPyd~~d~d~~CksLv~kG~---V--RvadikfpLPY 61 (171)
+||+.+-||++..-.+.+. . ....+|+|.-... +.--.+.|.-.|+ + +.+|.-..-+.
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~-~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTT-WKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHH-HHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHH-HHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 6899999999876655321 1 3457888765432 2222345666664 3 55664222234
Q ss_pred CCCcccEEEE
Q 030792 62 RAKSFPLVIV 71 (171)
Q Consensus 62 R~KSFslViv 71 (171)
....||+||+
T Consensus 326 ~~~~fD~Iv~ 335 (544)
T 3khk_A 326 PDLRADFVMT 335 (544)
T ss_dssp TTCCEEEEEE
T ss_pred ccccccEEEE
Confidence 4578999886
No 312
>3iec_E 120 kDa protein, cytotoxicity-associated immunodominant antigen; protein-protein complex, kinase, virulence factor, alternati promoter usage; 2.20A {Helicobacter pylori}
Probab=26.96 E-value=15 Score=28.39 Aligned_cols=37 Identities=38% Similarity=0.460 Sum_probs=27.8
Q ss_pred hhhchhhhhhhhccCceEEEecCCCcchhhhhhhhhcCCCcc
Q 030792 82 YLNKTLPDLARVASDGVLIFAGYPGQQRAKVAELSKFGRPAK 123 (171)
Q Consensus 82 ylNkTlPeLaRvs~dgiVif~g~pgq~~ak~~elskfgr~ak 123 (171)
.||++...|-+| .=.+|+|-..-++|.+|||-|+.+.
T Consensus 51 ~ln~~as~~~~~-----g~~~gfplkr~~kV~DlSkvGlS~s 87 (125)
T 3iec_E 51 RLNQIASGLGGV-----GQAAGFPLKRHDKVDDLSKVGLSAS 87 (125)
T ss_pred hhhhHHHhhccc-----cccccchhhcccccccccccccccC
Confidence 677776665443 2346899999999999999998654
No 313
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=26.79 E-value=1.1e+02 Score=25.29 Aligned_cols=79 Identities=13% Similarity=0.105 Sum_probs=54.9
Q ss_pred CCCcccEEEEcccccccChhhhhchhhhhhhhccCceEE-EecCCC---cc---hhhhhhhhh-cCCCccc----cchhH
Q 030792 62 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLI-FAGYPG---QQ---RAKVAELSK-FGRPAKM----RSSSW 129 (171)
Q Consensus 62 R~KSFslVivSDaLdyLsprylNkTlPeLaRvs~dgiVi-f~g~pg---q~---~ak~~elsk-fgr~ak~----RsssW 129 (171)
.+..-.++|+--+|=||+|...++++-.++.....|..| |--.+. .. +.-+.-+.+ .|-|.+. .+-.+
T Consensus 191 d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~~~~~~v~~e~i~~~~~~~~fg~~m~~~l~~~rg~~l~~~~~y~s~~~ 270 (334)
T 1rjd_A 191 KREIPTIVISECLLCYMHNNESQLLINTIMSKFSHGLWISYDPIGGSQPNDRFGAIMQSNLKESRNLEMPTLMTYNSKEK 270 (334)
T ss_dssp CTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEEEEEECCCCSTTCCHHHHHHHHHHHHHCCCCTTTTTTCSHHH
T ss_pred CCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhCCCcEEEEEeccCCCCCcchHHHHHHHHhhcccCCcccccccCCCHHH
Confidence 445678999999999999999999999999988887654 433222 10 112233444 5555543 36677
Q ss_pred HHHHHHHhccc
Q 030792 130 WIRYFVQTSLE 140 (171)
Q Consensus 130 W~r~F~q~~le 140 (171)
..+.|.+.|.+
T Consensus 271 ~~~rl~~~Gf~ 281 (334)
T 1rjd_A 271 YASRWSAAPNV 281 (334)
T ss_dssp HHGGGTTSSEE
T ss_pred HHHHHHHCCCC
Confidence 88889888886
No 314
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=26.67 E-value=30 Score=27.94 Aligned_cols=98 Identities=14% Similarity=0.106 Sum_probs=54.1
Q ss_pred cceeecC-Cc-hhHhHhhhhccccc-ccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEcccccccC
Q 030792 3 KVLHVGP-DT-CSVVSTLLKEEETE-AWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 79 (171)
Q Consensus 3 kVLHvGP-~t-C~vVs~llkee~te-AWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyLs 79 (171)
+|+-+|- +. ...+.+.+++.+.+ .++|.|-...+. ..|+--..++. .+|-.. ..|++| ++..
T Consensus 9 ~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~~--------i~G~~vy~sl~-el~~~~-~~Dv~I-----i~vp 73 (288)
T 1oi7_A 9 RVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGME--------VLGVPVYDTVK-EAVAHH-EVDASI-----IFVP 73 (288)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE--------ETTEEEESSHH-HHHHHS-CCSEEE-----ECCC
T ss_pred EEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCce--------ECCEEeeCCHH-HHhhcC-CCCEEE-----EecC
Confidence 5666774 32 44444444455665 468888642100 11221111221 122110 345554 5788
Q ss_pred hhhhhchhhhhhhhccCceEEEe-cCCCcchhhhhhh
Q 030792 80 PKYLNKTLPDLARVASDGVLIFA-GYPGQQRAKVAEL 115 (171)
Q Consensus 80 prylNkTlPeLaRvs~dgiVif~-g~pgq~~ak~~el 115 (171)
|+..-..+-|+++---.++|+|+ |+|..+..++.+.
T Consensus 74 ~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~ 110 (288)
T 1oi7_A 74 APAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEE 110 (288)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH
Confidence 88888888888888778788776 6887654455444
No 315
>2fph_X YLMH; division protein, bacteria, GRAM+, DNA binding protein; 1.70A {Streptococcus pneumoniae}
Probab=25.45 E-value=25 Score=26.64 Aligned_cols=37 Identities=5% Similarity=-0.031 Sum_probs=26.3
Q ss_pred cccChhhhhchhhhhhhhccCceEEEecCCCcchhhhh
Q 030792 76 DYLSPKYLNKTLPDLARVASDGVLIFAGYPGQQRAKVA 113 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~dgiVif~g~pgq~~ak~~ 113 (171)
|+|+|+..+-...-+.+. .=.+..+-|||+-+|.++.
T Consensus 34 ~FL~p~e~~i~~~i~~~~-~~~~~~~GGy~~AER~r~~ 70 (165)
T 2fph_X 34 PFINPHQEKLLKILAKTY-GLACSSSGEFVSSEYVRVL 70 (165)
T ss_dssp CCBCHHHHHHHHHHHHHT-TCEEEEGGGTSCCSSBCEE
T ss_pred CCCCHHHHHHHHHHHhcc-CcEEEEeCCCcHHheeEEE
Confidence 489999998766555554 2345566679999988764
No 316
>2kwt_A Protease NS2-3; NS2 domain, membrane protein, viral prote; NMR {Hepatitis c virus}
Probab=24.93 E-value=28 Score=21.68 Aligned_cols=10 Identities=40% Similarity=1.554 Sum_probs=8.4
Q ss_pred hhHHHHHHHH
Q 030792 127 SSWWIRYFVQ 136 (171)
Q Consensus 127 ssWW~r~F~q 136 (171)
.-||.+||..
T Consensus 7 ~lWWlqYfi~ 16 (33)
T 2kwt_A 7 LIWWLQYFIT 16 (33)
T ss_dssp THHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4699999975
No 317
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=24.86 E-value=1.6e+02 Score=20.98 Aligned_cols=83 Identities=16% Similarity=0.128 Sum_probs=46.4
Q ss_pred cceeecC----Cc-hhHhHhhhhcccccccccccccc-cchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEccccc
Q 030792 3 KVLHVGP----DT-CSVVSTLLKEEETEAWGVEPYDI-EDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALD 76 (171)
Q Consensus 3 kVLHvGP----~t-C~vVs~llkee~teAWGVEPyd~-~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLd 76 (171)
+|.=||- |. ...+.+-|.+.+.+.|.|.|... +.. .|+--..++ -.+|- .-|+||++
T Consensus 15 ~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i---------~G~~~~~sl-~el~~---~~Dlvii~---- 77 (145)
T 2duw_A 15 TIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL---------LGQQGYATL-ADVPE---KVDMVDVF---- 77 (145)
T ss_dssp CEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE---------TTEECCSST-TTCSS---CCSEEECC----
T ss_pred EEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc---------CCeeccCCH-HHcCC---CCCEEEEE----
Confidence 4455565 22 33444434455667888887653 212 254333445 25552 45777764
Q ss_pred ccChhhhhchhhhhhhhccCceEEEec
Q 030792 77 YLSPKYLNKTLPDLARVASDGVLIFAG 103 (171)
Q Consensus 77 yLsprylNkTlPeLaRvs~dgiVif~g 103 (171)
+.|...-.++-++++.-..+|++++|
T Consensus 78 -vp~~~v~~v~~~~~~~g~~~i~i~~~ 103 (145)
T 2duw_A 78 -RNSEAAWGVAQEAIAIGAKTLWLQLG 103 (145)
T ss_dssp -SCSTHHHHHHHHHHHHTCCEEECCTT
T ss_pred -eCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 45666666677777766677777755
No 318
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=24.40 E-value=1.6e+02 Score=20.57 Aligned_cols=86 Identities=14% Similarity=0.069 Sum_probs=44.8
Q ss_pred ccEEEEcccccccChhh--hhchhhhhhhhccCc--eEEEecC-CCc-ch---hhhh------hhhhcCCCccccchhHH
Q 030792 66 FPLVIVSDALDYLSPKY--LNKTLPDLARVASDG--VLIFAGY-PGQ-QR---AKVA------ELSKFGRPAKMRSSSWW 130 (171)
Q Consensus 66 FslVivSDaLdyLspry--lNkTlPeLaRvs~dg--iVif~g~-pgq-~~---ak~~------elskfgr~ak~RsssWW 130 (171)
.+++|. |=+|++++.. .+.-+.-+-+....+ .+|+++. +.. -. ..+. ..-.|..|-.--...++
T Consensus 105 ~~vlii-De~~~~~~~~~~~~~l~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~r~~~~~~i~l~~~~~~~~~~~l 183 (242)
T 3bos_A 105 FDLICI-DDVDAVAGHPLWEEAIFDLYNRVAEQKRGSLIVSASASPMEAGFVLPDLVSRMHWGLTYQLQPMMDDEKLAAL 183 (242)
T ss_dssp SSEEEE-ETGGGGTTCHHHHHHHHHHHHHHHHHCSCEEEEEESSCTTTTTCCCHHHHHHHHHSEEEECCCCCGGGHHHHH
T ss_pred CCEEEE-eccccccCCHHHHHHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHhhhhhhhHhhcCceEEeCCCCHHHHHHHH
Confidence 345544 5588887755 555444444443333 3666653 322 11 1111 12233444444445677
Q ss_pred HHHHHHhccccchHHHHHHHHH
Q 030792 131 IRYFVQTSLEENEPAVKKFEQA 152 (171)
Q Consensus 131 ~r~F~q~~leeNea~~kkfeqa 152 (171)
.+++.+.|+.-.+++...+.+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~l~~~ 205 (242)
T 3bos_A 184 QRRAAMRGLQLPEDVGRFLLNR 205 (242)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHHHHH
Confidence 7777777877777776655543
No 319
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=23.89 E-value=1.9e+02 Score=23.07 Aligned_cols=105 Identities=15% Similarity=0.245 Sum_probs=57.6
Q ss_pred ccceeecCCchhH-hHhhhhcccc-cccccccccccc--hhHHHHHHhHhc-----ceeeeeecCCCCCC-CCcccEEEE
Q 030792 2 HKVLHVGPDTCSV-VSTLLKEEET-EAWGVEPYDIED--ADARCKSLVHKG-----IVRVADIKFPLPYR-AKSFPLVIV 71 (171)
Q Consensus 2 ~kVLHvGP~tC~v-Vs~llkee~t-eAWGVEPyd~~d--~d~~CksLv~kG-----~VRvadikfpLPYR-~KSFslViv 71 (171)
.||.=+|-|+-+- +..++...+- + |-.+|++. ++....+|.+.- .+| |.+--.|. -+.=|+||.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~---v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~---i~~t~d~~a~~~aD~Vi~ 76 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGD---IVLLDIVEGVPQGKALDLYEASPIEGFDVR---VTGTNNYADTANSDVIVV 76 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSE---EEEECSSSSHHHHHHHHHHTTHHHHTCCCC---EEEESCGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCe---EEEEeCCccHHHHHHHhHHHhHhhcCCCeE---EEECCCHHHHCCCCEEEE
Confidence 4788888876443 3333433332 3 66677654 555555554421 111 22212232 245688887
Q ss_pred ccc---------cc--ccChhhhhchhhhhhhhccCceEEEecCCCcchhhh
Q 030792 72 SDA---------LD--YLSPKYLNKTLPDLARVASDGVLIFAGYPGQQRAKV 112 (171)
Q Consensus 72 SDa---------Ld--yLsprylNkTlPeLaRvs~dgiVif~g~pgq~~ak~ 112 (171)
+-- .| .-.-...-...+++.+.+.+++||.++.|-..-+.+
T Consensus 77 a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv~~~t~~ 128 (309)
T 1ur5_A 77 TSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYL 128 (309)
T ss_dssp CCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCchHHHHHH
Confidence 731 11 111233345667888888999999999997665444
No 320
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=23.52 E-value=38 Score=27.46 Aligned_cols=40 Identities=3% Similarity=0.167 Sum_probs=26.2
Q ss_pred cccChhhhhchhhhhhhhccCceEEEe-cCCCcchhhhhhh
Q 030792 76 DYLSPKYLNKTLPDLARVASDGVLIFA-GYPGQQRAKVAEL 115 (171)
Q Consensus 76 dyLsprylNkTlPeLaRvs~dgiVif~-g~pgq~~ak~~el 115 (171)
++..|++.-..+-|+++.-..++|+++ |+|.++..++.+.
T Consensus 76 i~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~ 116 (294)
T 2yv1_A 76 IFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNY 116 (294)
T ss_dssp ECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHH
T ss_pred EccCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH
Confidence 467777777777777777777667655 5766554444443
No 321
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=23.13 E-value=61 Score=23.79 Aligned_cols=8 Identities=13% Similarity=0.160 Sum_probs=6.0
Q ss_pred CceEEEec
Q 030792 96 DGVLIFAG 103 (171)
Q Consensus 96 dgiVif~g 103 (171)
-.+||++|
T Consensus 52 ~d~vi~~G 59 (322)
T 2nxf_A 52 VQCVVQLG 59 (322)
T ss_dssp CSEEEECS
T ss_pred CCEEEECC
Confidence 35788888
No 322
>3rco_A Tudor domain-containing protein 7; structural genomics, structural genomics consortium, SGC, HL DNA binding protein; 1.80A {Homo sapiens} PDB: 2lh9_A
Probab=22.78 E-value=49 Score=23.79 Aligned_cols=42 Identities=14% Similarity=0.358 Sum_probs=27.0
Q ss_pred CCCCCCCCcccEEEEcccccccChhhhhchhhhhhhh--ccCceEEEecCCCcch
Q 030792 57 FPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV--ASDGVLIFAGYPGQQR 109 (171)
Q Consensus 57 fpLPYR~KSFslVivSDaLdyLsprylNkTlPeLaRv--s~dgiVif~g~pgq~~ 109 (171)
-|+|||.=.|+ +..-+=++.||.+++ +.+|-|+.-.-|.+..
T Consensus 44 ~~iP~r~lGy~-----------sl~~fL~siPdvv~~~~~~~Gev~v~Av~~~~t 87 (89)
T 3rco_A 44 DWIPFKQLGFP-----------TLEAYLRSVPAVVRIETSRSGEITCYAMACTET 87 (89)
T ss_dssp SCCCTTTTTCS-----------SHHHHHHTCTTTEEEEECTTSCEEEEECC----
T ss_pred CcCChhhhCcc-----------cHHHHHhcccCeEEEEecCCCCEEEEEEEcccc
Confidence 68999986664 444455899999987 4477776555565543
No 323
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=22.61 E-value=40 Score=27.25 Aligned_cols=57 Identities=25% Similarity=0.410 Sum_probs=35.6
Q ss_pred HHHhHhcceeeeeecCCCCCCCCcccEEEEcccccc-cChh----------hhhchhhhhhhhccCc-eEEEecC
Q 030792 42 KSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY-LSPK----------YLNKTLPDLARVASDG-VLIFAGY 104 (171)
Q Consensus 42 ksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdy-Lspr----------ylNkTlPeLaRvs~dg-iVif~g~ 104 (171)
+.|.++.-++|-|.+-. +-....| +|+.+| +-|+ -+|+|+|+|...+.++ .||..|-
T Consensus 130 ~~l~~~~~v~V~d~~p~-~~~~~~~-----~~~~e~~~l~~~D~v~iTGsTlvN~Ti~~lL~~~~~~~~vvl~GP 198 (249)
T 3npg_A 130 RTLKEKYEVYVFERNMK-LWDRDTY-----SDTLEYHILPEVDGIIASASCIVNGTLDMILDRAKKAKLIVITGP 198 (249)
T ss_dssp HHHTTTSEEEEECCSGG-GCCSSEE-----CGGGHHHHGGGCSEEEEETTHHHHTCHHHHHHHCSSCSEEEEESG
T ss_pred HHHhccCCEEEEECCCc-ccCCCCC-----ChhHHHhhhccCCEEEEEeeeeccCCHHHHHHhCcccCeEEEEec
Confidence 45555566777776332 1122222 567764 5554 5899999999888766 5788873
No 324
>1jbi_A Cochlin, COCH-5B2; alpha-beta protein, structural genomics, unknown function; NMR {Homo sapiens} SCOP: d.209.1.1
Probab=22.12 E-value=34 Score=24.64 Aligned_cols=34 Identities=29% Similarity=0.663 Sum_probs=26.7
Q ss_pred CCchhHhHhhhhcccccccccccccccchhHHHHHHhHhccee
Q 030792 9 PDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVR 51 (171)
Q Consensus 9 P~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VR 51 (171)
|..|.- .....||=.+|..+ +.-|++-|+.|++.
T Consensus 25 Pa~C~~-------~~~~V~Gt~~Y~~d--S~iC~AAIHaGvi~ 58 (100)
T 1jbi_A 25 PGGCPL-------EEFSVYGNIVYASV--SSICGAAVHRGVIS 58 (100)
T ss_dssp CSCCCT-------TSCCEESSSSEETT--SBHHHHHHHHTSSC
T ss_pred CCCCCC-------CCCeEEeCCcccCC--CHHHhhheeccEEc
Confidence 666743 23588999898875 78999999999985
No 325
>3on3_A Keto/oxoacid ferredoxin oxidoreductase, gamma SUB; structural genomics, PSI-2, protein structure initiative; 2.19A {Geobacter sulfurreducens}
Probab=21.78 E-value=69 Score=24.03 Aligned_cols=81 Identities=15% Similarity=0.204 Sum_probs=45.9
Q ss_pred cceeecCCchhHh------Hhhh-hcccccccccccccccchhHHHHHHhHhc-----ceeeeeecCCCCCCCCcccEEE
Q 030792 3 KVLHVGPDTCSVV------STLL-KEEETEAWGVEPYDIEDADARCKSLVHKG-----IVRVADIKFPLPYRAKSFPLVI 70 (171)
Q Consensus 3 kVLHvGP~tC~vV------s~ll-kee~teAWGVEPyd~~d~d~~CksLv~kG-----~VRvadikfpLPYR~KSFslVi 70 (171)
.++=.|.|-=++| .+.. ..++..+-+.+-|.++ ++| -||++|=...-||.. ..|+|+
T Consensus 7 ~i~i~G~GGqGvvta~~ila~aa~~~~G~~v~~~~~yg~~----------~RGG~~~s~vris~~~I~sp~i~-~~D~lv 75 (183)
T 3on3_A 7 EIRFSGAGGQGLILAGVIMAEAASIYDGKQAVQSQSYGPE----------ARGGASKSEVIISDGPVDYPKAT-QCDALL 75 (183)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECSS----------CSSSCEEEEEEEECC---------CCSEEE
T ss_pred EEEEEEeCchHHHHHHHHHHHHHHHhCCCcEEEeeCcChh----------hcCCeEEEEEEEeCCccCCCCcC-CCCEEE
Confidence 3444555544433 3334 4667777777888877 334 378887433445533 688888
Q ss_pred EcccccccChhhhhchhhhhhhhccCceEEEec
Q 030792 71 VSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 103 (171)
Q Consensus 71 vSDaLdyLsprylNkTlPeLaRvs~dgiVif~g 103 (171)
+-|. ..+++.++ ++..+|+||.-.
T Consensus 76 ~~~~------~~~~~~~~---~l~~gg~vi~ns 99 (183)
T 3on3_A 76 ALTQ------EACDKYSA---DLKEGGVLLVDS 99 (183)
T ss_dssp ESSH------HHHHHSTT---TSCTTCEEEEET
T ss_pred EcCH------HHHHHHHh---ccCCCeEEEEeC
Confidence 8765 44455443 567889888865
No 326
>2raa_A Pyruvate synthase subunit PORC; TM0015, pyruvate oxidoreductase subunit PORC (EC 1.2.7.1), S genomics; HET: MSE; 2.12A {Thermotoga maritima MSB8}
Probab=21.78 E-value=1.2e+02 Score=23.19 Aligned_cols=69 Identities=19% Similarity=0.258 Sum_probs=39.1
Q ss_pred hhhhcccccccccccccccchhHHHHHHhHhc-----ceeeeeecCCCCCCCCcccEEEEcccccccChhhhhchhhhhh
Q 030792 17 TLLKEEETEAWGVEPYDIEDADARCKSLVHKG-----IVRVADIKFPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLA 91 (171)
Q Consensus 17 ~llkee~teAWGVEPyd~~d~d~~CksLv~kG-----~VRvadikfpLPYR~KSFslVivSDaLdyLsprylNkTlPeLa 91 (171)
+....++..+-+.+-|..+ ++| -||++|=....+|--...|+|++-|. ..+++ .-+.
T Consensus 41 ~aa~~~G~~v~~~~~yg~~----------~RGG~~~s~vRis~~pI~~~s~~~~~Dilv~~d~------~~l~~--~~~~ 102 (204)
T 2raa_A 41 EAALEAGKYVQAFPEYGAE----------RTGAPMRAFNRIGDEYIRVRSAVENPDVVVVIDE------TLLSP--AIVE 102 (204)
T ss_dssp HHHHHTTCCEEEEEECCC-----------CTTCEEEEEEEEECC------CCSSCSEEEESSG------GGCSG--GGGT
T ss_pred HHHHHcCCcEEEEeCCChh----------HcCCeEEEEEEEeCCcccCCCcccCCCEEEEeCH------HHHhh--HHHh
Confidence 3345677778888888877 233 35677643322444447778777664 34443 2334
Q ss_pred hhccCceEEEec
Q 030792 92 RVASDGVLIFAG 103 (171)
Q Consensus 92 Rvs~dgiVif~g 103 (171)
++..+|++|.-.
T Consensus 103 ~lk~gg~ii~ns 114 (204)
T 2raa_A 103 GLSEDGILLVNT 114 (204)
T ss_dssp TCCTTSEEEEEC
T ss_pred ccCCCcEEEEeC
Confidence 567788888765
No 327
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=21.51 E-value=89 Score=22.70 Aligned_cols=44 Identities=18% Similarity=0.243 Sum_probs=23.7
Q ss_pred ChhhhhchhhhhhhhccCceEEEecCCCcchhhhhhhhhcCCCc
Q 030792 79 SPKYLNKTLPDLARVASDGVLIFAGYPGQQRAKVAELSKFGRPA 122 (171)
Q Consensus 79 sprylNkTlPeLaRvs~dgiVif~g~pgq~~ak~~elskfgr~a 122 (171)
++......+-.|..---||||++...+.....-+..+.+.|-|+
T Consensus 54 ~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPv 97 (304)
T 3gbv_A 54 DYNSFVATSQAVIEEQPDGVMFAPTVPQYTKGFTDALNELGIPY 97 (304)
T ss_dssp CHHHHHHHHHHHHTTCCSEEEECCSSGGGTHHHHHHHHHHTCCE
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCChHHHHHHHHHHHHCCCeE
Confidence 44444445555555566777776554433334455555555554
No 328
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=21.36 E-value=3e+02 Score=21.62 Aligned_cols=10 Identities=30% Similarity=0.428 Sum_probs=8.9
Q ss_pred CccceeecCC
Q 030792 1 MHKVLHVGPD 10 (171)
Q Consensus 1 m~kVLHvGP~ 10 (171)
|++||=+|.|
T Consensus 1 M~~Ililg~g 10 (380)
T 3ax6_A 1 MKKIGIIGGG 10 (380)
T ss_dssp CCEEEEECCS
T ss_pred CCEEEEECCC
Confidence 8899999987
No 329
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=21.31 E-value=1.8e+02 Score=24.79 Aligned_cols=99 Identities=18% Similarity=0.241 Sum_probs=61.7
Q ss_pred CccceeecCCchhH--hHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCCCCCCCCcccEEEEccccccc
Q 030792 1 MHKVLHVGPDTCSV--VSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 78 (171)
Q Consensus 1 m~kVLHvGP~tC~v--Vs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfpLPYR~KSFslVivSDaLdyL 78 (171)
|++|+=+|=|--++ +.++|++.+-+.-|.+..+ ......|-+.|+--.-. . -|-.-..+|+||+|-++..=
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~----~~~~~~l~~~gi~~~~g-~--~~~~~~~~d~vV~Spgi~~~ 94 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP----NSVTQHLTALGAQIYFH-H--RPENVLDASVVVVSTAISAD 94 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC----CHHHHHHHHTTCEEESS-C--CGGGGTTCSEEEECTTSCTT
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC----CHHHHHHHHCCCEEECC-C--CHHHcCCCCEEEECCCCCCC
Confidence 35677778776665 6888889988887765432 22345677778621111 1 11122568999999999877
Q ss_pred Chhhhh---chh-----hh-hhhhccC-ceEEEecCCC
Q 030792 79 SPKYLN---KTL-----PD-LARVASD-GVLIFAGYPG 106 (171)
Q Consensus 79 sprylN---kTl-----Pe-LaRvs~d-giVif~g~pg 106 (171)
.|...- +-+ +| |+++... -+|..||--|
T Consensus 95 ~p~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnG 132 (494)
T 4hv4_A 95 NPEIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHG 132 (494)
T ss_dssp CHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEECSSS
T ss_pred CHHHHHHHHCCCCEEcHHHHHHHHhcCCCEEEEecCCC
Confidence 776543 222 24 3565554 3788898665
No 330
>3l7w_A Putative uncharacterized protein SMU.1704; PADR, transcriptional factor, transcription; HET: MSE; 2.20A {Streptococcus mutans} SCOP: a.4.5.0
Probab=21.27 E-value=29 Score=23.72 Aligned_cols=44 Identities=11% Similarity=0.011 Sum_probs=31.0
Q ss_pred ceeecCCchhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeee
Q 030792 4 VLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVAD 54 (171)
Q Consensus 4 VLHvGP~tC~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvad 54 (171)
+|.-||-+.+-+.+-+.+ .|++.+.. +-..-+.|.++|+|....
T Consensus 17 ~L~~~~~~gyel~~~l~~----~~~i~~~t---ly~~L~~Le~~GlI~~~~ 60 (108)
T 3l7w_A 17 IVSKHDSYGYDISQTIKL----IASIKEST---LYPILKKLEKAGYLSTYT 60 (108)
T ss_dssp HHHHSCEEHHHHHHHHTT----TCCCCHHH---HHHHHHHHHHTTSEEEEE
T ss_pred HHHcCCCcHHHHHHHHHH----HhCCCcCh---HHHHHHHHHHCCCeEEEe
Confidence 344577777666666643 57776654 457889999999998754
No 331
>3tr3_A BOLA; cellular processes, stress-induced, unknown function; 2.46A {Coxiella burnetii}
Probab=21.18 E-value=67 Score=22.34 Aligned_cols=45 Identities=9% Similarity=0.171 Sum_probs=33.0
Q ss_pred CCcccEEEEcccccccCh----hhhhchhhhhhhhccCceEEEecCCCc
Q 030792 63 AKSFPLVIVSDALDYLSP----KYLNKTLPDLARVASDGVLIFAGYPGQ 107 (171)
Q Consensus 63 ~KSFslVivSDaLdyLsp----rylNkTlPeLaRvs~dgiVif~g~pgq 107 (171)
-..|+++||||+.+=++. |-.|+.|-|...=.=|++=|.+--|.+
T Consensus 30 gshf~v~IVS~~F~G~~~v~Rhr~V~~~L~~~~~~~iHAL~i~t~Tp~E 78 (82)
T 3tr3_A 30 GHHFEAVVLCPTFEGQTALTRHRLVYNALGSHMQSDIHALSLKTYTPDE 78 (82)
T ss_dssp SSEEEEEEECGGGTTCCHHHHHHHHHHHTGGGGTTTCSEEEEEEECHHH
T ss_pred CCeEEEEEEchhhCCCCHHHHHHHHHHHHHHHHcCCcceEEEEeCCHHH
Confidence 468999999999999886 678888887663244666666655543
No 332
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=20.95 E-value=1.7e+02 Score=23.50 Aligned_cols=114 Identities=20% Similarity=0.233 Sum_probs=62.0
Q ss_pred cceeecC-Cc-hhHhHhhhhcccccccccccccccchhHHHHHHhHhcceeeeeecCC---CCCC--CCcccEEEEcccc
Q 030792 3 KVLHVGP-DT-CSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFP---LPYR--AKSFPLVIVSDAL 75 (171)
Q Consensus 3 kVLHvGP-~t-C~vVs~llkee~teAWGVEPyd~~d~d~~CksLv~kG~VRvadikfp---LPYR--~KSFslVivSDaL 75 (171)
||.=+|- |. +..+..+|...+- +--|-.+|++.+.....+|.+.. .. .++++- --|+ -+.-|+||.+--.
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~-~~ev~L~Di~~~~~~a~dL~~~~-~~-~~l~~~~~t~d~~~a~~~aDvVvi~ag~ 78 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAHTPGVAADLSHIE-TR-ATVKGYLGPEQLPDCLKGCDVVVIPAGV 78 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSSHHHHHHHHTTSS-SS-CEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred EEEEECCCChHHHHHHHHHHhCCC-CcEEEEEeCCccHHHHHHHhccC-cC-ceEEEecCCCCHHHHhCCCCEEEECCCc
Confidence 5667775 43 3444445545441 11244566665666667776532 11 233331 2244 3677888876432
Q ss_pred cccC----h-------hhhhchhhhhhhhccCceEEEecCCCcchhhhh-h-hhhcC
Q 030792 76 DYLS----P-------KYLNKTLPDLARVASDGVLIFAGYPGQQRAKVA-E-LSKFG 119 (171)
Q Consensus 76 dyLs----p-------rylNkTlPeLaRvs~dgiVif~g~pgq~~ak~~-e-lskfg 119 (171)
-... . ..+-...+++.+.+.+++||+++.|-.--+-++ + +.|++
T Consensus 79 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~~~~~~~~~ 135 (314)
T 1mld_A 79 PRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPITAEVFKKHG 135 (314)
T ss_dssp CCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCcchhHHHHHHHHHHcC
Confidence 2111 0 233345567777889999999999977655332 3 44443
No 333
>2atm_A Hyaluronoglucosaminidase; beta-alpha-barrels, hydrolase; HET: MES; 2.00A {Vespula vulgaris}
Probab=20.85 E-value=42 Score=29.23 Aligned_cols=29 Identities=21% Similarity=0.485 Sum_probs=27.1
Q ss_pred ccccChhhhhchhhhhhhhccCceEEEec
Q 030792 75 LDYLSPKYLNKTLPDLARVASDGVLIFAG 103 (171)
Q Consensus 75 LdyLsprylNkTlPeLaRvs~dgiVif~g 103 (171)
..|||-..|-.|+-|.|-.-++||||--+
T Consensus 270 ~~fLs~~DL~~TigesaalGa~GiViWGs 298 (331)
T 2atm_A 270 NTFLTETDVKKTFQEIVINGGDGIIIWGS 298 (331)
T ss_dssp EEECCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cccccHHHHHHHHHHHHHcCCCeEEEecc
Confidence 46999999999999999999999999876
No 334
>2cqj_A BRMS2, U3 small nucleolar ribonucleoprotein protein IMP3 homolog; S4 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.71 E-value=60 Score=21.51 Aligned_cols=23 Identities=26% Similarity=0.239 Sum_probs=18.2
Q ss_pred hHHHHHHhHhcceeeeeecCCCC
Q 030792 38 DARCKSLVHKGIVRVADIKFPLP 60 (171)
Q Consensus 38 d~~CksLv~kG~VRvadikfpLP 60 (171)
-+.++.||..|.|+|.+-...-|
T Consensus 23 R~~A~~lI~~G~V~Vng~~v~kp 45 (71)
T 2cqj_A 23 LQAAVAFVEQGHVRVGPDVVTDP 45 (71)
T ss_dssp HHHHHHHHHTTCEEETTBCCCCT
T ss_pred HHHHHHHHHCCcEEECCEEECCC
Confidence 46789999999999998754433
No 335
>3izc_W 60S ribosomal protein RPL22 (L22E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_W 3u5e_U 3u5i_U 4b6a_U
Probab=20.14 E-value=24 Score=27.08 Aligned_cols=31 Identities=42% Similarity=0.615 Sum_probs=22.9
Q ss_pred cEEEEccc------ccccChhhh-hchhhhhhhhccCc
Q 030792 67 PLVIVSDA------LDYLSPKYL-NKTLPDLARVASDG 97 (171)
Q Consensus 67 slVivSDa------LdyLspryl-NkTlPeLaRvs~dg 97 (171)
.++++|++ |.||+.+|| ...|-|-.||-|.+
T Consensus 62 ki~V~s~~~fSKRYLKYLTKKyLKK~~LRDwlRVVa~~ 99 (121)
T 3izc_W 62 VVTVVSTAKFSGKYLKYLTKKYLKKNQLRDWIRFVSTK 99 (121)
T ss_dssp EEEEEESSSCSHHHHHHHHHHHHTTSSSCCCCCCSSSC
T ss_pred EEEEEeccccchHHHHHHHHHHhhhccccceEEEEecC
Confidence 45666654 889999999 45799999986643
Done!