Query 030793
Match_columns 171
No_of_seqs 169 out of 1337
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 06:57:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030793.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030793hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gl5_A Putative DSBA oxidoredu 100.0 1.1E-35 3.9E-40 225.0 20.2 167 1-170 36-212 (239)
2 3fz5_A Possible 2-hydroxychrom 100.0 2.8E-33 9.6E-38 206.9 13.8 162 1-168 34-199 (202)
3 3rpp_A Glutathione S-transfera 100.0 1.5E-30 5.2E-35 196.3 10.9 164 1-169 35-213 (234)
4 2imf_A HCCA isomerase, 2-hydro 100.0 6.9E-31 2.4E-35 194.0 7.3 161 1-170 30-195 (203)
5 1r4w_A Glutathione S-transfera 100.0 6.8E-29 2.3E-33 186.2 9.4 163 1-169 35-213 (226)
6 3kzq_A Putative uncharacterize 100.0 3E-27 1E-31 175.1 17.2 157 1-170 34-202 (208)
7 2in3_A Hypothetical protein; D 99.9 1.1E-25 3.6E-30 167.1 18.8 159 1-170 39-209 (216)
8 3feu_A Putative lipoprotein; a 99.9 8E-23 2.7E-27 148.9 5.2 149 19-170 24-183 (185)
9 3h93_A Thiol:disulfide interch 99.9 5.1E-22 1.8E-26 144.9 9.0 146 21-170 29-183 (192)
10 3hz8_A Thiol:disulfide interch 99.9 1.7E-21 5.8E-26 142.7 10.0 145 21-170 28-182 (193)
11 3gha_A Disulfide bond formatio 99.8 1.3E-20 4.5E-25 138.9 8.3 147 21-170 33-191 (202)
12 2rem_A Disulfide oxidoreductas 99.8 1.9E-19 6.6E-24 131.0 13.9 143 23-170 31-183 (193)
13 2znm_A Thiol:disulfide interch 99.8 3.7E-20 1.3E-24 135.2 8.9 144 23-170 28-179 (195)
14 3l9v_A Putative thiol-disulfid 99.8 1E-19 3.5E-24 132.7 10.3 146 20-170 17-182 (189)
15 3bci_A Disulfide bond protein 99.8 1.9E-19 6.6E-24 130.6 11.1 145 23-170 17-177 (186)
16 3hd5_A Thiol:disulfide interch 99.8 1E-19 3.6E-24 132.9 9.5 145 21-170 29-183 (195)
17 3l9s_A Thiol:disulfide interch 99.8 1.1E-19 3.6E-24 133.0 9.3 145 20-169 24-187 (191)
18 4dvc_A Thiol:disulfide interch 99.8 4.9E-19 1.7E-23 127.6 10.6 146 21-170 25-181 (184)
19 3gn3_A Putative protein-disulf 99.8 1.4E-18 4.9E-23 126.0 8.2 142 22-166 19-181 (182)
20 3c7m_A Thiol:disulfide interch 99.7 1E-18 3.6E-23 127.1 5.4 147 23-171 23-194 (195)
21 3gyk_A 27KDA outer membrane pr 99.7 1.5E-17 5.2E-22 119.2 9.6 138 23-170 28-172 (175)
22 3f4s_A Alpha-DSBA1, putative u 99.7 9.4E-18 3.2E-22 125.6 3.9 144 22-170 44-210 (226)
23 3gmf_A Protein-disulfide isome 99.6 1.9E-16 6.5E-21 116.9 4.1 145 21-171 19-197 (205)
24 1z6m_A Conserved hypothetical 99.4 3.2E-12 1.1E-16 91.3 9.1 133 23-167 33-174 (175)
25 1un2_A DSBA, thiol-disulfide i 99.0 7.8E-10 2.7E-14 80.8 8.4 60 94-154 1-63 (197)
26 1v58_A Thiol:disulfide interch 98.4 7.6E-08 2.6E-12 72.2 2.0 121 23-169 103-231 (241)
27 1t3b_A Thiol:disulfide interch 98.1 7.1E-06 2.4E-10 60.2 6.6 114 23-170 92-210 (211)
28 3gv1_A Disulfide interchange p 98.0 4.1E-06 1.4E-10 58.2 4.1 112 23-170 20-138 (147)
29 1eej_A Thiol:disulfide interch 97.9 2E-05 6.9E-10 57.8 5.7 113 23-170 92-210 (216)
30 1nho_A Probable thioredoxin; b 97.3 0.00025 8.6E-09 43.3 3.9 36 135-170 49-84 (85)
31 1fo5_A Thioredoxin; disulfide 97.2 0.00033 1.1E-08 42.7 3.8 35 135-169 50-84 (85)
32 1ilo_A Conserved hypothetical 96.8 0.00068 2.3E-08 40.6 2.6 32 135-166 44-76 (77)
33 3kp8_A Vkorc1/thioredoxin doma 96.5 0.0033 1.1E-07 40.6 4.2 31 136-167 61-91 (106)
34 1un2_A DSBA, thiol-disulfide i 96.4 0.00085 2.9E-08 48.5 0.9 71 20-93 116-195 (197)
35 3dml_A Putative uncharacterize 96.2 0.0078 2.7E-07 39.8 4.9 36 135-170 70-109 (116)
36 2qgv_A Hydrogenase-1 operon pr 96.2 0.011 3.7E-07 40.4 5.6 36 135-170 85-124 (140)
37 1dby_A Chloroplast thioredoxin 96.0 0.0069 2.4E-07 38.3 4.0 36 136-171 68-107 (107)
38 2trx_A Thioredoxin; electron t 96.0 0.013 4.4E-07 37.1 5.1 36 135-170 68-107 (108)
39 2hls_A Protein disulfide oxido 95.9 0.011 3.7E-07 43.9 5.1 36 135-170 190-225 (243)
40 1t00_A Thioredoxin, TRX; redox 95.9 0.012 4.2E-07 37.5 4.6 36 135-170 71-110 (112)
41 2lqo_A Putative glutaredoxin R 95.8 0.048 1.6E-06 34.3 7.1 66 100-170 18-83 (92)
42 1fb6_A Thioredoxin M; electron 95.6 0.018 6.2E-07 36.0 4.6 35 135-169 66-104 (105)
43 2e0q_A Thioredoxin; electron t 95.5 0.027 9.2E-07 34.9 5.1 36 135-170 63-102 (104)
44 2qsi_A Putative hydrogenase ex 95.5 0.017 5.9E-07 39.3 4.3 35 135-169 83-121 (137)
45 2o8v_B Thioredoxin 1; disulfid 95.5 0.023 8E-07 37.5 5.0 36 135-170 88-127 (128)
46 1ep7_A Thioredoxin CH1, H-type 95.5 0.019 6.4E-07 36.5 4.3 35 136-171 73-111 (112)
47 3tco_A Thioredoxin (TRXA-1); d 95.4 0.024 8.2E-07 35.6 4.8 37 135-171 69-109 (109)
48 1nsw_A Thioredoxin, TRX; therm 95.4 0.012 4.2E-07 37.0 3.2 36 135-170 65-104 (105)
49 1w4v_A Thioredoxin, mitochondr 95.4 0.029 1E-06 36.3 5.1 36 135-170 79-118 (119)
50 2i4a_A Thioredoxin; acidophIle 95.3 0.023 7.9E-07 35.6 4.4 35 135-169 68-106 (107)
51 1thx_A Thioredoxin, thioredoxi 95.3 0.031 1.1E-06 35.5 5.1 36 135-170 73-112 (115)
52 2l57_A Uncharacterized protein 95.3 0.028 9.5E-07 36.7 4.8 36 135-170 76-116 (126)
53 3gnj_A Thioredoxin domain prot 95.1 0.038 1.3E-06 34.9 5.0 36 135-170 70-109 (111)
54 3zzx_A Thioredoxin; oxidoreduc 95.1 0.033 1.1E-06 35.7 4.6 33 135-168 67-103 (105)
55 1syr_A Thioredoxin; SGPP, stru 95.1 0.022 7.4E-07 36.5 3.8 35 135-170 73-111 (112)
56 1oaz_A Thioredoxin 1; immune s 95.1 0.017 5.7E-07 38.0 3.2 36 135-170 83-122 (123)
57 2l6c_A Thioredoxin; oxidoreduc 95.1 0.024 8.2E-07 36.3 3.9 35 135-169 66-104 (110)
58 3ic4_A Glutaredoxin (GRX-1); s 95.0 0.056 1.9E-06 33.3 5.3 30 136-167 62-91 (92)
59 1faa_A Thioredoxin F; electron 94.9 0.032 1.1E-06 36.2 4.3 35 136-171 86-124 (124)
60 3die_A Thioredoxin, TRX; elect 94.9 0.03 1E-06 35.0 4.0 35 135-169 67-105 (106)
61 2voc_A Thioredoxin; electron t 94.9 0.032 1.1E-06 35.7 4.2 35 135-169 65-103 (112)
62 1xfl_A Thioredoxin H1; AT3G510 94.9 0.041 1.4E-06 36.1 4.8 35 135-170 85-123 (124)
63 2yzu_A Thioredoxin; redox prot 94.8 0.032 1.1E-06 35.0 3.9 35 135-169 66-104 (109)
64 2vlu_A Thioredoxin, thioredoxi 94.8 0.049 1.7E-06 35.1 5.0 35 135-170 81-119 (122)
65 2j23_A Thioredoxin; immune pro 94.8 0.035 1.2E-06 36.1 4.2 35 136-171 83-121 (121)
66 1v98_A Thioredoxin; oxidoreduc 94.8 0.05 1.7E-06 36.2 5.1 36 135-170 98-137 (140)
67 1r7h_A NRDH-redoxin; thioredox 94.8 0.093 3.2E-06 30.6 5.8 58 102-167 17-74 (75)
68 2ywm_A Glutaredoxin-like prote 94.8 0.027 9.2E-07 40.9 4.0 35 135-169 183-218 (229)
69 1mek_A Protein disulfide isome 94.8 0.021 7.3E-07 36.5 3.1 35 136-170 76-116 (120)
70 2ppt_A Thioredoxin-2; thiredox 94.8 0.051 1.7E-06 37.2 5.1 36 135-170 112-151 (155)
71 2es7_A Q8ZP25_salty, putative 94.7 0.046 1.6E-06 37.1 4.8 36 135-170 85-124 (142)
72 4euy_A Uncharacterized protein 94.7 0.027 9.3E-07 35.5 3.4 35 136-170 66-104 (105)
73 2pu9_C TRX-F, thioredoxin F-ty 94.7 0.038 1.3E-06 35.1 4.2 35 136-171 73-111 (111)
74 3hz4_A Thioredoxin; NYSGXRC, P 94.7 0.037 1.3E-06 37.0 4.2 35 136-170 73-111 (140)
75 3uvt_A Thioredoxin domain-cont 94.6 0.058 2E-06 33.9 4.7 35 135-169 72-110 (111)
76 3qfa_C Thioredoxin; protein-pr 94.5 0.052 1.8E-06 35.0 4.4 34 135-169 78-115 (116)
77 2kuc_A Putative disulphide-iso 94.5 0.064 2.2E-06 35.0 4.9 36 135-170 80-120 (130)
78 3f3q_A Thioredoxin-1; His TAG, 94.4 0.062 2.1E-06 34.2 4.6 34 135-169 71-108 (109)
79 3m9j_A Thioredoxin; oxidoreduc 94.4 0.066 2.3E-06 33.3 4.7 34 135-169 67-104 (105)
80 2dj1_A Protein disulfide-isome 94.2 0.079 2.7E-06 35.0 5.0 36 135-170 85-123 (140)
81 1xwb_A Thioredoxin; dimerizati 94.2 0.066 2.3E-06 33.4 4.3 34 135-169 68-105 (106)
82 2i1u_A Thioredoxin, TRX, MPT46 94.2 0.026 8.9E-07 36.3 2.4 35 135-169 78-116 (121)
83 1r26_A Thioredoxin; redox-acti 94.1 0.062 2.1E-06 35.3 4.2 35 135-170 84-122 (125)
84 3cxg_A Putative thioredoxin; m 94.1 0.063 2.1E-06 35.6 4.3 35 135-170 86-128 (133)
85 3emx_A Thioredoxin; structural 94.0 0.12 4E-06 34.3 5.5 36 135-170 86-125 (135)
86 2vm1_A Thioredoxin, thioredoxi 94.0 0.1 3.5E-06 33.2 5.1 35 135-170 75-113 (118)
87 2vim_A Thioredoxin, TRX; thior 94.0 0.086 2.9E-06 32.7 4.6 34 135-169 66-103 (104)
88 3kp9_A Vkorc1/thioredoxin doma 93.9 0.048 1.6E-06 41.8 3.8 31 135-166 245-275 (291)
89 1zzo_A RV1677; thioredoxin fol 93.9 0.086 2.9E-06 34.2 4.6 63 98-170 67-134 (136)
90 3tdg_A DSBG, putative uncharac 93.9 0.049 1.7E-06 41.3 3.7 106 23-150 153-265 (273)
91 3p2a_A Thioredoxin 2, putative 93.9 0.098 3.3E-06 35.1 5.0 36 135-170 103-142 (148)
92 2xc2_A Thioredoxinn; oxidoredu 93.9 0.09 3.1E-06 33.7 4.6 34 135-169 79-116 (117)
93 2oe3_A Thioredoxin-3; electron 93.8 0.075 2.6E-06 34.2 4.2 33 135-168 77-113 (114)
94 2av4_A Thioredoxin-like protei 93.8 0.076 2.6E-06 37.0 4.2 36 135-170 89-138 (160)
95 1a8l_A Protein disulfide oxido 93.7 0.076 2.6E-06 38.2 4.4 36 135-170 186-225 (226)
96 3ul3_B Thioredoxin, thioredoxi 93.6 0.068 2.3E-06 35.0 3.7 34 135-168 90-127 (128)
97 1wjk_A C330018D20RIK protein; 93.6 0.065 2.2E-06 33.9 3.4 34 135-169 61-94 (100)
98 3hxs_A Thioredoxin, TRXP; elec 93.5 0.1 3.6E-06 34.5 4.6 36 135-170 99-138 (141)
99 2fwh_A Thiol:disulfide interch 93.5 0.081 2.8E-06 35.0 4.0 35 135-169 85-126 (134)
100 3d6i_A Monothiol glutaredoxin- 93.3 0.14 4.9E-06 32.3 4.9 35 135-170 70-108 (112)
101 2ju5_A Thioredoxin disulfide i 93.2 0.15 5.1E-06 34.7 5.0 36 135-171 110-152 (154)
102 3ktb_A Arsenical resistance op 93.1 0.39 1.3E-05 31.0 6.4 32 135-166 69-101 (106)
103 1x5e_A Thioredoxin domain cont 93.0 0.11 3.7E-06 33.7 3.9 35 135-169 71-108 (126)
104 3d22_A TRXH4, thioredoxin H-ty 92.9 0.16 5.4E-06 33.6 4.7 35 135-170 93-131 (139)
105 1ti3_A Thioredoxin H, PTTRXH1; 92.6 0.056 1.9E-06 34.2 2.0 34 136-170 74-111 (113)
106 2l5l_A Thioredoxin; structural 92.5 0.2 6.8E-06 33.1 4.8 36 135-170 86-125 (136)
107 3gix_A Thioredoxin-like protei 92.4 0.16 5.6E-06 34.4 4.3 36 135-170 71-120 (149)
108 2b5x_A YKUV protein, TRXY; thi 92.4 0.18 6.2E-06 33.2 4.5 63 98-170 77-144 (148)
109 2lst_A Thioredoxin; structural 91.5 0.025 8.6E-07 37.1 0.0 36 135-170 72-115 (130)
110 1zma_A Bacterocin transport ac 92.3 0.088 3E-06 33.8 2.7 33 135-167 81-117 (118)
111 3qmx_A Glutaredoxin A, glutare 92.2 0.22 7.4E-06 31.5 4.4 53 101-158 31-83 (99)
112 2fgx_A Putative thioredoxin; N 92.2 0.23 8E-06 32.0 4.6 56 101-166 49-106 (107)
113 1ttz_A Conserved hypothetical 92.2 0.068 2.3E-06 33.2 1.9 32 136-169 43-75 (87)
114 1x5d_A Protein disulfide-isome 92.1 0.19 6.6E-06 32.6 4.2 35 136-170 78-116 (133)
115 2wz9_A Glutaredoxin-3; protein 92.0 0.24 8.3E-06 33.4 4.8 35 135-170 79-117 (153)
116 1lu4_A Soluble secreted antige 91.9 0.2 6.9E-06 32.5 4.2 63 98-170 66-135 (136)
117 3kgk_A Arsenical resistance op 91.9 0.41 1.4E-05 31.1 5.4 32 135-166 66-98 (110)
118 2yj7_A LPBCA thioredoxin; oxid 91.1 0.031 1.1E-06 34.8 0.0 35 135-169 67-105 (106)
119 3dxb_A Thioredoxin N-terminall 91.7 0.25 8.5E-06 35.7 4.8 36 135-170 78-117 (222)
120 3or5_A Thiol:disulfide interch 91.7 0.94 3.2E-05 30.3 7.6 67 98-170 78-150 (165)
121 1gh2_A Thioredoxin-like protei 91.6 0.24 8.1E-06 31.0 4.1 35 135-170 68-106 (107)
122 3h79_A Thioredoxin-like protei 91.5 0.28 9.5E-06 31.8 4.5 35 135-169 86-126 (127)
123 1ego_A Glutaredoxin; electron 91.4 0.28 9.5E-06 29.3 4.1 29 136-168 51-81 (85)
124 3f9u_A Putative exported cytoc 91.2 0.16 5.5E-06 35.0 3.2 36 135-170 124-165 (172)
125 2dml_A Protein disulfide-isome 91.1 0.19 6.7E-06 32.6 3.4 34 136-169 84-122 (130)
126 2f9s_A Thiol-disulfide oxidore 91.0 0.38 1.3E-05 31.9 4.9 63 98-170 70-137 (151)
127 1kng_A Thiol:disulfide interch 91.0 0.23 7.8E-06 33.1 3.8 64 98-170 83-151 (156)
128 3ha9_A Uncharacterized thiored 90.9 0.22 7.4E-06 33.8 3.6 112 27-170 47-163 (165)
129 3eyt_A Uncharacterized protein 90.9 0.42 1.4E-05 31.9 5.1 69 97-170 78-151 (158)
130 1h75_A Glutaredoxin-like prote 90.8 0.053 1.8E-06 32.4 0.3 30 136-167 45-74 (81)
131 3lor_A Thiol-disulfide isomera 90.8 0.42 1.4E-05 32.0 5.0 71 97-171 80-155 (160)
132 2h30_A Thioredoxin, peptide me 90.7 0.24 8.4E-06 33.4 3.8 35 136-170 116-155 (164)
133 4evm_A Thioredoxin family prot 90.7 0.3 1E-05 31.4 4.1 63 97-169 69-137 (138)
134 2l5o_A Putative thioredoxin; s 90.5 0.21 7.3E-06 33.2 3.3 64 97-170 72-140 (153)
135 3ph9_A Anterior gradient prote 90.2 0.27 9.2E-06 33.7 3.6 22 135-156 94-120 (151)
136 2djj_A PDI, protein disulfide- 90.1 0.33 1.1E-05 30.9 3.8 33 138-170 78-116 (121)
137 3apq_A DNAJ homolog subfamily 90.1 0.42 1.4E-05 34.1 4.7 36 135-170 162-201 (210)
138 1qgv_A Spliceosomal protein U5 89.9 0.39 1.3E-05 32.2 4.1 35 135-169 71-119 (142)
139 1fov_A Glutaredoxin 3, GRX3; a 89.8 0.27 9.3E-06 29.1 3.0 50 101-156 16-65 (82)
140 2k8s_A Thioredoxin; dimer, str 89.6 0.14 4.7E-06 30.7 1.5 27 136-162 50-77 (80)
141 1hyu_A AHPF, alkyl hydroperoxi 89.2 0.38 1.3E-05 39.5 4.4 34 135-168 164-197 (521)
142 3ia1_A THIO-disulfide isomeras 89.2 0.49 1.7E-05 31.5 4.3 67 97-170 72-143 (154)
143 3msz_A Glutaredoxin 1; alpha-b 89.2 0.53 1.8E-05 28.2 4.1 27 138-168 58-84 (89)
144 3nzn_A Glutaredoxin; structura 89.1 0.3 1E-05 30.8 3.0 29 136-166 72-101 (103)
145 2lja_A Putative thiol-disulfid 89.0 0.36 1.2E-05 32.0 3.5 63 99-170 75-142 (152)
146 3qou_A Protein YBBN; thioredox 88.9 0.57 1.9E-05 34.9 4.8 35 135-169 74-112 (287)
147 2e7p_A Glutaredoxin; thioredox 88.7 0.12 4.2E-06 33.0 0.9 33 136-169 68-106 (116)
148 2yan_A Glutaredoxin-3; oxidore 88.3 0.56 1.9E-05 29.6 3.9 54 100-159 36-89 (105)
149 3raz_A Thioredoxin-related pro 88.2 0.75 2.6E-05 30.5 4.7 67 97-170 66-139 (151)
150 1wmj_A Thioredoxin H-type; str 88.0 0.13 4.5E-06 33.3 0.6 34 136-170 84-121 (130)
151 3c1r_A Glutaredoxin-1; oxidize 87.8 0.29 1E-05 31.8 2.3 22 136-158 77-98 (118)
152 2dbc_A PDCL2, unnamed protein 87.6 0.84 2.9E-05 30.1 4.6 34 136-169 75-119 (135)
153 3ewl_A Uncharacterized conserv 87.4 0.58 2E-05 30.6 3.6 64 98-170 74-140 (142)
154 2axo_A Hypothetical protein AT 87.4 1.1 3.7E-05 33.8 5.5 34 135-169 106-141 (270)
155 2vup_A Glutathione peroxidase- 87.4 2.8 9.5E-05 29.1 7.4 71 98-170 99-184 (190)
156 3aps_A DNAJ homolog subfamily 86.9 0.58 2E-05 29.8 3.4 36 135-170 69-112 (122)
157 3fk8_A Disulphide isomerase; A 86.9 0.94 3.2E-05 29.4 4.4 36 135-170 82-132 (133)
158 1kte_A Thioltransferase; redox 86.7 0.35 1.2E-05 30.3 2.1 20 136-156 63-82 (105)
159 2dj3_A Protein disulfide-isome 86.3 0.57 1.9E-05 30.4 3.1 35 136-170 76-117 (133)
160 1t1v_A SH3BGRL3, SH3 domain-bi 85.9 1.2 4.1E-05 27.3 4.3 54 100-159 22-77 (93)
161 3erw_A Sporulation thiol-disul 85.8 0.74 2.5E-05 29.9 3.5 59 98-166 81-144 (145)
162 2f51_A Thioredoxin; electron t 85.6 0.65 2.2E-05 29.7 3.1 34 135-169 70-111 (118)
163 3h8q_A Thioredoxin reductase 3 85.6 1.1 3.8E-05 28.7 4.2 58 100-160 31-88 (114)
164 3ipz_A Monothiol glutaredoxin- 85.5 1.5 5.1E-05 27.9 4.8 52 100-158 37-89 (109)
165 2khp_A Glutaredoxin; thioredox 85.4 0.77 2.6E-05 27.9 3.2 51 101-157 21-71 (92)
166 2b1k_A Thiol:disulfide interch 85.2 0.54 1.9E-05 31.8 2.7 63 98-169 91-158 (168)
167 3idv_A Protein disulfide-isome 84.9 1.1 3.9E-05 32.1 4.4 35 135-169 198-235 (241)
168 3ctg_A Glutaredoxin-2; reduced 84.7 0.52 1.8E-05 31.2 2.3 23 136-159 89-111 (129)
169 3fkf_A Thiol-disulfide oxidore 84.4 1.5 5E-05 28.6 4.5 64 99-170 79-145 (148)
170 2cq9_A GLRX2 protein, glutared 84.1 1.1 3.8E-05 29.5 3.7 20 136-156 75-94 (130)
171 3evi_A Phosducin-like protein 84.0 1.2 4E-05 29.0 3.7 34 135-168 67-111 (118)
172 3rhb_A ATGRXC5, glutaredoxin-C 83.8 1.1 3.8E-05 28.5 3.5 57 100-158 33-89 (113)
173 3idv_A Protein disulfide-isome 83.8 1.4 4.7E-05 31.6 4.5 35 135-169 83-120 (241)
174 1u6t_A SH3 domain-binding glut 83.8 1.6 5.4E-05 28.8 4.3 58 100-162 20-84 (121)
175 1a8l_A Protein disulfide oxido 83.7 1.1 3.9E-05 31.8 3.9 34 135-168 72-110 (226)
176 1aba_A Glutaredoxin; electron 83.7 1.2 4.1E-05 26.9 3.5 55 101-157 19-80 (87)
177 2ht9_A Glutaredoxin-2; thiored 83.3 1.2 4.1E-05 30.1 3.7 20 136-156 97-116 (146)
178 2lrn_A Thiol:disulfide interch 83.3 1.3 4.5E-05 29.3 3.9 65 98-170 73-140 (152)
179 3kh7_A Thiol:disulfide interch 83.2 0.94 3.2E-05 31.2 3.2 65 97-170 97-166 (176)
180 2klx_A Glutaredoxin; thioredox 83.0 0.48 1.7E-05 28.7 1.5 21 136-157 49-70 (89)
181 3zyw_A Glutaredoxin-3; metal b 82.9 2.2 7.7E-05 27.3 4.7 52 100-158 35-87 (111)
182 2ct6_A SH3 domain-binding glut 82.5 1.4 4.6E-05 28.2 3.5 53 101-158 29-88 (111)
183 2wci_A Glutaredoxin-4; redox-a 81.6 2.2 7.4E-05 28.5 4.4 53 100-159 54-107 (135)
184 3gl3_A Putative thiol:disulfid 81.4 2.1 7.3E-05 28.1 4.4 63 98-170 72-141 (152)
185 2djk_A PDI, protein disulfide- 80.6 2 7E-05 28.0 4.0 36 135-170 70-114 (133)
186 2r2j_A Thioredoxin domain-cont 80.2 2.3 7.9E-05 33.2 4.8 36 135-170 76-116 (382)
187 1wik_A Thioredoxin-like protei 79.7 1.5 5.1E-05 27.8 3.0 53 99-157 33-85 (109)
188 2qc7_A ERP31, ERP28, endoplasm 79.3 2.5 8.6E-05 31.1 4.5 35 135-169 75-117 (240)
189 2hze_A Glutaredoxin-1; thiored 78.8 0.85 2.9E-05 29.2 1.6 20 136-156 70-89 (114)
190 2wem_A Glutaredoxin-related pr 78.6 3.3 0.00011 26.9 4.5 53 100-158 39-92 (118)
191 3gx8_A Monothiol glutaredoxin- 77.6 2.9 9.9E-05 27.2 4.0 54 100-159 35-91 (121)
192 3hcz_A Possible thiol-disulfid 77.5 1.6 5.3E-05 28.5 2.7 64 98-169 75-144 (148)
193 3fw2_A Thiol-disulfide oxidore 77.1 3.1 0.00011 27.3 4.1 65 98-170 80-147 (150)
194 2cvb_A Probable thiol-disulfid 76.5 2.2 7.6E-05 29.3 3.4 64 97-170 82-158 (188)
195 2ywm_A Glutaredoxin-like prote 76.4 2.4 8.4E-05 30.2 3.7 34 135-168 75-112 (229)
196 2dlx_A UBX domain-containing p 76.2 3.2 0.00011 28.3 4.0 35 135-170 95-135 (153)
197 3lwa_A Secreted thiol-disulfid 76.1 3.6 0.00012 28.1 4.4 66 98-170 110-180 (183)
198 2da7_A Zinc finger homeobox pr 75.8 5.4 0.00018 23.6 4.3 31 83-114 17-47 (71)
199 2ywi_A Hypothetical conserved 74.3 2.1 7.1E-05 29.6 2.7 64 97-170 96-173 (196)
200 3cmi_A Peroxiredoxin HYR1; thi 73.9 3.2 0.00011 28.1 3.6 36 135-170 121-167 (171)
201 3eur_A Uncharacterized protein 72.7 2.3 8E-05 27.7 2.5 32 135-167 107-141 (142)
202 3kcm_A Thioredoxin family prot 72.4 2.3 7.9E-05 28.0 2.5 61 99-169 74-141 (154)
203 1wou_A Thioredoxin -related pr 72.2 2.7 9.4E-05 26.9 2.8 33 136-168 87-122 (123)
204 2ggt_A SCO1 protein homolog, m 71.8 6.2 0.00021 26.1 4.6 66 98-170 75-160 (164)
205 3ed3_A Protein disulfide-isome 70.8 4.2 0.00014 30.7 3.9 34 135-168 85-139 (298)
206 2p5q_A Glutathione peroxidase 70.7 11 0.00036 25.0 5.7 72 98-171 83-168 (170)
207 3us3_A Calsequestrin-1; calciu 70.3 4.8 0.00017 31.2 4.2 35 135-169 85-122 (367)
208 2hls_A Protein disulfide oxido 68.8 4.9 0.00017 29.3 3.8 33 135-167 80-113 (243)
209 2trc_P Phosducin, MEKA, PP33; 68.3 2.9 0.0001 30.1 2.4 34 135-168 166-210 (217)
210 2b5e_A Protein disulfide-isome 68.1 5.8 0.0002 32.0 4.4 34 136-169 426-465 (504)
211 3f8u_A Protein disulfide-isome 67.6 6.5 0.00022 31.5 4.6 35 135-169 69-107 (481)
212 3ira_A Conserved protein; meth 67.6 3 0.0001 29.1 2.3 11 137-147 100-110 (173)
213 3f8u_A Protein disulfide-isome 66.6 6.5 0.00022 31.4 4.4 34 136-169 420-459 (481)
214 2hyx_A Protein DIPZ; thioredox 66.4 6.2 0.00021 30.8 4.1 63 98-170 131-198 (352)
215 3q6o_A Sulfhydryl oxidase 1; p 64.5 10 0.00035 27.2 4.8 34 135-169 83-125 (244)
216 2b5e_A Protein disulfide-isome 64.1 9 0.00031 30.9 4.8 35 135-169 80-120 (504)
217 2rli_A SCO2 protein homolog, m 63.6 9.9 0.00034 25.3 4.3 27 144-170 133-163 (171)
218 1sji_A Calsequestrin 2, calseq 62.1 5.1 0.00018 30.7 2.9 35 135-169 83-120 (350)
219 2k6v_A Putative cytochrome C o 61.8 4.1 0.00014 27.2 2.1 33 137-169 133-171 (172)
220 4fo5_A Thioredoxin-like protei 61.8 4.4 0.00015 26.3 2.2 64 98-168 76-142 (143)
221 3t58_A Sulfhydryl oxidase 1; o 60.5 10 0.00035 31.1 4.5 36 135-170 83-126 (519)
222 2c0g_A ERP29 homolog, windbeut 59.9 13 0.00046 27.3 4.7 35 135-169 87-130 (248)
223 3iv4_A Putative oxidoreductase 58.3 6.5 0.00022 25.4 2.4 32 135-166 74-111 (112)
224 2ko6_A Uncharacterized protein 57.6 10 0.00034 23.0 2.9 35 79-114 7-41 (89)
225 3l4n_A Monothiol glutaredoxin- 57.0 4.5 0.00015 26.6 1.5 22 137-159 66-87 (127)
226 1sen_A Thioredoxin-like protei 56.1 16 0.00055 24.6 4.3 33 138-170 100-147 (164)
227 1nm3_A Protein HI0572; hybrid, 55.0 9.5 0.00033 27.4 3.2 20 136-156 214-233 (241)
228 1wi3_A DNA-binding protein SAT 54.6 21 0.00071 21.0 3.9 30 84-114 20-50 (71)
229 3u5r_E Uncharacterized protein 53.7 10 0.00036 26.8 3.1 64 97-170 109-186 (218)
230 3dwv_A Glutathione peroxidase- 50.6 22 0.00075 24.3 4.4 34 137-170 141-182 (187)
231 1xzo_A BSSCO, hypothetical pro 50.0 30 0.001 22.8 4.9 70 98-170 83-171 (174)
232 2wul_A Glutaredoxin related pr 50.0 30 0.001 22.4 4.6 52 101-159 40-93 (118)
233 2ec4_A FAS-associated factor 1 49.4 22 0.00077 24.6 4.2 36 135-170 124-167 (178)
234 2l8n_A Transcriptional repress 49.3 25 0.00086 20.1 3.8 39 101-139 11-53 (67)
235 3uem_A Protein disulfide-isome 49.2 11 0.00038 28.7 2.9 33 136-168 316-354 (361)
236 3apo_A DNAJ homolog subfamily 48.9 12 0.00039 32.1 3.1 34 135-168 181-218 (780)
237 2lrt_A Uncharacterized protein 47.9 17 0.00059 23.8 3.4 29 136-164 108-141 (152)
238 2v1m_A Glutathione peroxidase; 47.2 56 0.0019 21.2 6.2 71 98-170 82-166 (169)
239 1uxc_A FRUR (1-57), fructose r 46.2 20 0.00069 20.4 3.0 31 102-132 3-38 (65)
240 1jfu_A Thiol:disulfide interch 44.7 28 0.00095 23.4 4.1 67 99-170 106-179 (186)
241 3apo_A DNAJ homolog subfamily 43.1 27 0.00093 29.8 4.6 36 135-170 503-541 (780)
242 3hdc_A Thioredoxin family prot 42.3 25 0.00086 23.0 3.5 33 135-167 109-148 (158)
243 3ga4_A Dolichyl-diphosphooligo 40.2 13 0.00043 26.0 1.7 34 135-168 97-150 (178)
244 1p4q_A CBP/P300-interacting tr 38.5 15 0.00053 19.8 1.5 21 94-114 13-33 (52)
245 2p31_A CL683, glutathione pero 38.3 12 0.00041 25.5 1.4 66 98-171 100-181 (181)
246 1r8u_A CBP/P300-interacting tr 38.1 24 0.00084 18.8 2.2 20 95-114 2-21 (50)
247 2bmx_A Alkyl hydroperoxidase C 37.4 40 0.0014 23.1 4.0 35 136-170 121-169 (195)
248 2r1j_L Repressor protein C2; p 33.1 49 0.0017 17.8 3.3 25 90-114 38-62 (68)
249 3sjr_A Uncharacterized protein 32.8 51 0.0017 22.6 3.6 33 77-109 96-128 (175)
250 3drn_A Peroxiredoxin, bacterio 31.6 53 0.0018 21.5 3.8 43 96-148 71-118 (161)
251 3omt_A Uncharacterized protein 31.2 58 0.002 18.1 3.5 25 90-114 41-65 (73)
252 3bs3_A Putative DNA-binding pr 31.0 58 0.002 18.1 3.5 25 90-114 43-67 (76)
253 3h5t_A Transcriptional regulat 30.9 41 0.0014 25.4 3.4 42 98-139 8-53 (366)
254 2jad_A Yellow fluorescent prot 30.6 39 0.0013 26.5 3.2 50 105-157 281-333 (362)
255 2ewt_A BLDD, putative DNA-bind 30.6 52 0.0018 18.0 3.1 25 90-114 43-67 (71)
256 1y7y_A C.AHDI; helix-turn-heli 30.4 60 0.0021 17.8 3.4 25 90-114 46-70 (74)
257 1zof_A Alkyl hydroperoxide-red 30.2 49 0.0017 22.6 3.5 34 136-169 112-159 (198)
258 1adr_A P22 C2 repressor; trans 29.8 66 0.0023 17.8 3.6 25 90-114 38-62 (76)
259 1xvw_A Hypothetical protein RV 29.8 69 0.0024 20.7 4.1 65 97-169 79-158 (160)
260 2xi8_A Putative transcription 29.5 69 0.0023 17.0 3.6 25 90-114 34-58 (66)
261 1i5g_A Tryparedoxin II; electr 29.0 25 0.00087 22.4 1.7 13 135-147 102-114 (144)
262 1we0_A Alkyl hydroperoxide red 28.9 49 0.0017 22.3 3.3 35 136-170 107-156 (187)
263 2hsg_A Glucose-resistance amyl 28.2 54 0.0019 24.3 3.7 32 101-132 4-37 (332)
264 1o8x_A Tryparedoxin, TRYX, TXN 28.2 27 0.00091 22.4 1.7 13 135-147 102-114 (146)
265 3kz3_A Repressor protein CI; f 28.0 69 0.0024 18.2 3.5 25 90-114 45-69 (80)
266 2dj0_A Thioredoxin-related tra 27.3 28 0.00097 22.2 1.7 25 136-160 76-110 (137)
267 2jxu_A TERB, KP-TERB; tellurit 26.4 73 0.0025 21.0 3.7 40 75-114 107-147 (153)
268 2eqy_A RBP2 like, jumonji, at 26.4 1.2E+02 0.004 19.5 4.6 63 34-113 15-77 (122)
269 1a0r_P Phosducin, MEKA, PP33; 25.8 28 0.00095 25.5 1.6 34 135-168 179-223 (245)
270 3f6w_A XRE-family like protein 25.3 81 0.0028 17.9 3.4 25 90-114 47-71 (83)
271 1o73_A Tryparedoxin; electron 25.1 24 0.00082 22.5 1.0 13 135-147 102-114 (144)
272 3s9f_A Tryparedoxin; thioredox 24.7 33 0.0011 22.8 1.7 13 135-147 122-134 (165)
273 1qpz_A PURA, protein (purine n 24.6 56 0.0019 24.3 3.2 32 101-132 2-35 (340)
274 3b7h_A Prophage LP1 protein 11 24.6 91 0.0031 17.3 3.5 25 90-114 40-65 (78)
275 3kjx_A Transcriptional regulat 24.5 64 0.0022 24.0 3.5 34 100-133 11-46 (344)
276 3t76_A VANU, transcriptional r 24.5 86 0.003 18.7 3.5 24 90-114 57-80 (88)
277 2kpj_A SOS-response transcript 24.4 86 0.0029 18.5 3.5 25 90-114 42-66 (94)
278 2b5a_A C.BCLI; helix-turn-heli 24.4 87 0.003 17.3 3.4 25 90-114 43-67 (77)
279 2gs3_A PHGPX, GPX-4, phospholi 23.6 1.4E+02 0.0047 20.0 4.8 70 98-169 100-184 (185)
280 2i3y_A Epididymal secretory gl 23.2 1.2E+02 0.004 21.4 4.5 27 144-170 180-210 (215)
281 2ofy_A Putative XRE-family tra 23.2 92 0.0032 17.8 3.4 25 90-114 47-72 (86)
282 3lfp_A CSP231I C protein; tran 22.6 79 0.0027 18.8 3.1 25 90-114 38-62 (98)
283 2d74_B Translation initiation 22.4 1.2E+02 0.0042 20.4 4.1 31 136-169 70-100 (148)
284 2obi_A PHGPX, GPX-4, phospholi 22.4 27 0.00092 23.6 0.9 70 98-169 98-182 (183)
285 2lm1_A Lysine-specific demethy 22.2 1.4E+02 0.0046 18.5 4.2 63 34-113 17-79 (107)
286 3s8q_A R-M controller protein; 21.9 1.1E+02 0.0036 17.3 3.5 25 90-114 44-68 (82)
287 4gba_A DCN1-like protein 3; E3 21.7 64 0.0022 23.4 2.8 34 81-114 7-40 (221)
288 2r37_A Glutathione peroxidase 21.7 1.4E+02 0.0049 20.7 4.7 27 144-170 162-192 (207)
289 2jrz_A Histone demethylase jar 21.6 84 0.0029 20.0 3.1 63 34-113 13-75 (117)
290 1z6n_A Hypothetical protein PA 21.2 37 0.0013 23.1 1.4 11 137-147 106-116 (167)
291 2f8a_A Glutathione peroxidase 20.9 70 0.0024 22.3 2.9 33 138-170 169-206 (208)
292 2h5n_A Hypothetical protein PG 20.9 1E+02 0.0034 20.0 3.5 42 73-114 79-121 (133)
293 2ls5_A Uncharacterized protein 26.3 21 0.00071 23.4 0.0 33 136-169 107-146 (159)
294 3qq6_A HTH-type transcriptiona 20.2 1.1E+02 0.0038 17.3 3.3 25 90-114 43-68 (78)
No 1
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=100.00 E-value=1.1e-35 Score=225.01 Aligned_cols=167 Identities=29% Similarity=0.436 Sum_probs=151.8
Q ss_pred CeEEEeecccCCCCCCCC-CCHHHHHHHhhC-C--hHHHHHHHHHHHHHhcCCccccCC-CCCCcHHHHHHHHHHHhcCc
Q 030793 1 MILRWHPFFLNPSAPKEG-VNKKDFYENKFG-S--QNQGIIARMTEVFRGLGLEYNMSG-LTGNTLDSHRLLYLAGQQGL 75 (171)
Q Consensus 1 ~~v~~~P~~L~p~~~~~g-~~~~~~~~~~~g-~--~~~~~~~~~~~~a~~~g~~~~~~~-~~~~s~~a~r~~~~a~~~g~ 75 (171)
++|+||||+|+|+++.+| .+..+++..+|| + +..++..++.++++.+|++|++++ ++.||..|||++.+|+++|
T Consensus 36 v~v~~~P~~L~p~~~~~g~~~~~~~~~~k~g~~~~~~~~~~~~~~r~a~~~Gl~f~~~~~~~~nt~~a~r~~~~A~~~g- 114 (239)
T 3gl5_A 36 VEVVHRSFELDPGRAKDDVQPVLTMLTAKYGMSQEQAQAGEDNLGAQAAAEGLAYRTRDRDHGSTFDLHRLLHLAKERG- 114 (239)
T ss_dssp EEEEEEECCSCTTCCTTCCEEHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCCCCCSSCEECCCHHHHHHHHHHHTTT-
T ss_pred eEEEEEEeccccCCCCCCCCCHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCCccCCCCCCCChHHHHHHHHHHHhhC-
Confidence 479999999999999876 467788989998 3 889999999999999999999976 4789999999999999999
Q ss_pred chHHHHHHHHHHHHhhcCCCCCC-HHHHHHHHHHcCCchh--HhhhcC-CCCChHHHHHHHHH-hhCCCCcccEEEECCe
Q 030793 76 DKQHNLAEELFLGYFTQGKYIGD-KEFLVECARKVGVEGA--AEFLDD-PNSGLNEVHEELKK-YSANISGVPHFVLNGK 150 (171)
Q Consensus 76 ~~~~~~~~~l~~a~~~~g~~i~~-~~~L~~ia~~~Gld~~--~~~~~~-~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~ 150 (171)
+.++++++||+++|.+|++|++ .++|.++++++|||.+ .+++++ + ++.+.++++.+. .++||+|||||+|||+
T Consensus 115 -~~~~~~~alf~a~~~~g~~i~d~~~~L~~~a~~~Gld~~~~~~~l~s~~-~~~~~v~~~~~~a~~~Gv~GvPtfvv~g~ 192 (239)
T 3gl5_A 115 -RHEALLDAFYRGNFADERSVFNDDERLVELAVGAGLDAEEVRAVLADPA-AYADEVRADEREAAQLGATGVPFFVLDRA 192 (239)
T ss_dssp -CHHHHHHHHHHHHHTCSSCCSSCHHHHHHHHHHTTCCHHHHHHHHHCTT-TTHHHHHHHHHHHHHTTCCSSSEEEETTT
T ss_pred -cHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHcCCCHHHHHHHHcCcH-hHHHHHHHHHHHHHHCCCCeeCeEEECCc
Confidence 8999999999999999999999 9999999999999987 567777 5 578888887765 7899999999999999
Q ss_pred eeeccCCCHHHHHHHHHHHh
Q 030793 151 HELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 151 ~~i~G~~~~~~~~~~l~~~~ 170 (171)
|.++|+++++.|.++|+++.
T Consensus 193 ~~v~Ga~~~e~~~~~i~~~~ 212 (239)
T 3gl5_A 193 YGVSGAQPAEVFTQALTQAW 212 (239)
T ss_dssp EEEESSCCHHHHHHHHHHHH
T ss_pred EeecCCCCHHHHHHHHHHHH
Confidence 99999999999999999864
No 2
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=100.00 E-value=2.8e-33 Score=206.89 Aligned_cols=162 Identities=17% Similarity=0.227 Sum_probs=133.3
Q ss_pred CeEEEeecccCCCCCCCCCCHHHHHHHhhCChHHHHHHHHHHHHHhcCCccccCC-CCCCcHHHHHHHHHHHhcCcchHH
Q 030793 1 MILRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEVFRGLGLEYNMSG-LTGNTLDSHRLLYLAGQQGLDKQH 79 (171)
Q Consensus 1 ~~v~~~P~~L~p~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~~-~~~~s~~a~r~~~~a~~~g~~~~~ 79 (171)
++|+||||+|+|.++.+|+........ +..++..++.++++.+|++|+++. ++.||..|||++.+|+++|+++..
T Consensus 34 ~~v~~~p~~L~~~~~~~g~~~~~~~~~----k~~~~~~~~~r~a~~~G~~f~~~~~~~~~t~~a~r~~~~a~~~g~~~~~ 109 (202)
T 3fz5_A 34 RTVLWRPYMLGAAFSVTGARGLSSTPL----KRDYAQRDWARIARQRGLTFRPPADHPHVALAATRAFYWIEAQSPDAAT 109 (202)
T ss_dssp CCEEEEECTTC----------CCSHHH----HHHHHHHHHHHHHHHHTCCCCCCTTCCCCCHHHHHHHHHHHHHCHHHHH
T ss_pred CeEEEEeeeccchhhhcCCCCcccCcH----HHHHHHHHHHHHHHHhCCCCCCCCCCCCChHHHHHHHHHHHhhCchHHH
Confidence 579999999999999888643222221 678999999999999999999876 567999999999999999887899
Q ss_pred HHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeeccC
Q 030793 80 NLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELSGG 156 (171)
Q Consensus 80 ~~~~~l~~a~~~~g~~i~~~~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~G~ 156 (171)
+++++||+++|.+|+++++.++|.++++++|||.+ .+++++ .++.+.++++.+. .+.||+|||||+|||+ .++|.
T Consensus 110 ~~~~alf~a~~~~g~~i~~~~~L~~~a~~~Gld~~~~~~~~~s-~~~~~~v~~~~~~a~~~Gv~GvPtfvv~g~-~~~G~ 187 (202)
T 3fz5_A 110 AFAQRVFDLYFSDRLDTASPEAVSRLGPEVGLEPEALLAGIAD-PALKETVRKIGEDAVARGIFGSPFFLVDDE-PFWGW 187 (202)
T ss_dssp HHHHHHHHHHTTTCCCTTCHHHHHTTHHHHTCCHHHHHHHTTC-HHHHHHHHHHHHHHHHTTCCSSSEEEETTE-EEESG
T ss_pred HHHHHHHHHHHhcCCCCCCHHHHHHHHHHcCCCHHHHHHHhcC-HHHHHHHHHHHHHHHHCCCCcCCEEEECCE-EEecC
Confidence 99999999999999999999999999999999987 567777 4677778877665 7899999999999998 78999
Q ss_pred CCHHHHHHHHHH
Q 030793 157 QPPEVYLRAFQV 168 (171)
Q Consensus 157 ~~~~~~~~~l~~ 168 (171)
++++.|.+.|..
T Consensus 188 ~~~~~l~~~l~~ 199 (202)
T 3fz5_A 188 DRMEMMAEWIRT 199 (202)
T ss_dssp GGHHHHHHHHHT
T ss_pred CCHHHHHHHHhc
Confidence 999999998864
No 3
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=99.97 E-value=1.5e-30 Score=196.28 Aligned_cols=164 Identities=15% Similarity=0.228 Sum_probs=131.9
Q ss_pred CeEEEeecccCCCCCCCCCCHHHHHHHhhCChHHHHHHHHHHHHHhcCCccccCC-CCC-----CcHHHHHHHHHHHhcC
Q 030793 1 MILRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEVFRGLGLEYNMSG-LTG-----NTLDSHRLLYLAGQQG 74 (171)
Q Consensus 1 ~~v~~~P~~L~p~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~~-~~~-----~s~~a~r~~~~a~~~g 74 (171)
++|+||||+|+|.++.+|+....... .+..|+..++.++++.+|++|+++. ++. ||..|||++.+|+.++
T Consensus 35 v~v~~~p~~L~~~~~~~g~~~~~~~~----~k~~y~~~~~~r~a~~~G~~f~~~~~~~~~~~~~nt~~a~r~~~aa~~~~ 110 (234)
T 3rpp_A 35 INLQLRPSLITGIMKDSGNKPPGLLP----RKGLYMANDLKLLRHHLQIPIHFPKDFLSVMLEKGSLSAMRFLTAVNLEH 110 (234)
T ss_dssp EEEEEEECCHHHHCC----CCCSSSC----HHHHHHHHHHHHHHHHHTCCCCCCSSCHHHHHHHCSHHHHHHHHHHHHHC
T ss_pred CeEEEEEeecchhhhhcCCCCcccCh----HHHHHHHHHHHHHHHHhCCCCCCCCCCcccccCCCCHHHHHHHHHHHHhC
Confidence 47999999999999887752211111 1678999999999999999999975 333 9999999999998775
Q ss_pred cchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCchh--Hhhh---cCCCCChHHHHHHHHH-hhCCCCcccEEEEC
Q 030793 75 LDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGA--AEFL---DDPNSGLNEVHEELKK-YSANISGVPHFVLN 148 (171)
Q Consensus 75 ~~~~~~~~~~l~~a~~~~g~~i~~~~~L~~ia~~~Gld~~--~~~~---~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~ 148 (171)
+++..+++++||+++|.+|+||+|.++|.++++++|||.+ .+++ ++ +++.++++++.+. .+.||+|||||||+
T Consensus 111 ~~~~~~~~~al~~A~~~~g~di~d~~~L~~~a~~~GLd~~~~~~~l~~~~s-~~~~~~l~~~~~~a~~~Gv~GvPtfvv~ 189 (234)
T 3rpp_A 111 PEMLEKASRELWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLLEKIAT-PKVKNQLKETTEAACRYGAFGLPITVAH 189 (234)
T ss_dssp GGGHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHTTCCHHHHHHHHTTTTS-HHHHHHHHHHHHHHHHTTCSSSCEEEEE
T ss_pred cHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHcCCCHHHHHHHHHHccC-HHHHHHHHHHHHHHHHcCCCCCCEEEEe
Confidence 5589999999999999999999999999999999999984 3344 44 3466667776654 68999999999995
Q ss_pred --Ce-eeeccCCCHHHHHHHHHHH
Q 030793 149 --GK-HELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 149 --~~-~~i~G~~~~~~~~~~l~~~ 169 (171)
|+ +.++|.++.+.+.+.|.++
T Consensus 190 ~~g~~~~f~G~drl~~l~~~L~~~ 213 (234)
T 3rpp_A 190 VDGQTHMLFGSDRMELLAHLLGEK 213 (234)
T ss_dssp ETTEEEEEESSSCHHHHHHHHTCC
T ss_pred CCCCcCceeCccCHHHHHHHhccc
Confidence 75 7899999999999988654
No 4
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=99.97 E-value=6.9e-31 Score=193.99 Aligned_cols=161 Identities=13% Similarity=0.148 Sum_probs=138.2
Q ss_pred CeEEEeecccCCCCCCCCCCHHHHHHHhhCC--hHHHHHHHHHHHHHhcCCccccCCCCCCcHHHHHHHHHHHhcCcchH
Q 030793 1 MILRWHPFFLNPSAPKEGVNKKDFYENKFGS--QNQGIIARMTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQ 78 (171)
Q Consensus 1 ~~v~~~P~~L~p~~~~~g~~~~~~~~~~~g~--~~~~~~~~~~~~a~~~g~~~~~~~~~~~s~~a~r~~~~a~~~g~~~~ 78 (171)
++|+||||.|+|.++.+|+.. +.+. |. +..++..++.++++.+|++|+++. +.||..|||++.+|+.+| ++
T Consensus 30 ~~v~~~p~~L~~~~~~~g~~~-~~~~---g~~~~~~~~~~~~~~~a~~~G~~~~~~~-~~~t~~a~r~~~~a~~~g--~~ 102 (203)
T 2imf_A 30 LTIRYNAIDLARVKIAIGNVG-PSNR---DLKVKLDYLKVDLQRWAQLYGIPLVFPA-NYNSRRMNIGFYYSGAEA--QA 102 (203)
T ss_dssp CEEEEEECCHHHHHHHHTCCS-CCGG---GCHHHHHHHHHHHHHHHHHHTCCCCCCS-CCCCHHHHHHGGGCCSHH--HH
T ss_pred CeEEEEeeecchhhHhhCCCC-cccc---cChHHHHHHHHHHHHHHHHcCCCCCCCC-CCChHHHHHHHHHHhCcC--hH
Confidence 579999999999877666432 2211 21 678999999999999999999988 899999999999998888 89
Q ss_pred HHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeecc
Q 030793 79 HNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELSG 155 (171)
Q Consensus 79 ~~~~~~l~~a~~~~g~~i~~~~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~G 155 (171)
++++++||+++|.+++++++.++|.++++++|+|.+ .+++++ .++.+.++++.+. .+.||+|||||+|||+ .++|
T Consensus 103 ~~~~~~lf~a~~~~~~~i~~~~~L~~~a~~~Gld~~~~~~~~~s-~~~~~~v~~~~~~a~~~Gv~G~Ptfvi~g~-~~~G 180 (203)
T 2imf_A 103 AAYVNVVFNAVWGEGIAPDLESLPALVSEKLGWDRSAFEHFLSS-NAATERYDEQTHAAIERKVFGVPTMFLGDE-MWWG 180 (203)
T ss_dssp HHHHHHHHHHHHHSCCCTTCTTHHHHHHHHHTCCHHHHHHHHHS-HHHHHHHHHHHHHHHHTTCCSSSEEEETTE-EEES
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHcCCCHHHHHHHhcC-HHHHHHHHHHHHHHHHCCCCcCCEEEECCE-EEEC
Confidence 999999999999999999999999999999999986 567777 3566777776664 7899999999999998 7899
Q ss_pred CCCHHHHHHHHHHHh
Q 030793 156 GQPPEVYLRAFQVAA 170 (171)
Q Consensus 156 ~~~~~~~~~~l~~~~ 170 (171)
+++++.|.+.|+++.
T Consensus 181 ~~~~~~l~~~l~~~~ 195 (203)
T 2imf_A 181 NDRLFMLESAMGRLC 195 (203)
T ss_dssp GGGHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhccc
Confidence 999999999998764
No 5
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=99.96 E-value=6.8e-29 Score=186.18 Aligned_cols=163 Identities=14% Similarity=0.176 Sum_probs=132.6
Q ss_pred CeEEEeecccCCCCCCCCCCHHHHHHHhhCChHHHHHHHHHHHHHhcCCccccCCC------CCCcHHHHHHHHHHHhcC
Q 030793 1 MILRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEVFRGLGLEYNMSGL------TGNTLDSHRLLYLAGQQG 74 (171)
Q Consensus 1 ~~v~~~P~~L~p~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~~~------~~~s~~a~r~~~~a~~~g 74 (171)
++|+||||.|+|.++.+|. ..+++... +..++..++.++++..|++|+++.. +.||..|||++.+|+.+|
T Consensus 35 ~~v~~~p~~L~~~~~~~g~-~~~~~~~~---~~~~~~~~~~r~a~~~G~~~~~~~~~~~~~~~~~s~~a~r~~~aa~~~g 110 (226)
T 1r4w_A 35 IKLKLRPALLAGIMKDSGN-QPPAMVPH---KGQYILKEIPLLKQLFQVPMSVPKDFFGEHVKKGTVNAMRFLTAVSMEQ 110 (226)
T ss_dssp EEEEEEECCHHHHHHHTTC-CCTTSSHH---HHHHHHHHHHHHHHHHTCCCCCCSSTTTHHHHHCSHHHHHHHHHHHHHC
T ss_pred CeEEEEeeecccchhccCC-CCcccChH---HHHHHHHHHHHHHHHhCCCCCCCCccccccCCCCCHHHHHHHHHHHhhC
Confidence 4799999999998877663 22222111 6788999999999999999998643 248999999999999888
Q ss_pred cchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCchh--Hh---hhcCCCCChHHHHHHHHH-hhCCCCcccEEEEC
Q 030793 75 LDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGA--AE---FLDDPNSGLNEVHEELKK-YSANISGVPHFVLN 148 (171)
Q Consensus 75 ~~~~~~~~~~l~~a~~~~g~~i~~~~~L~~ia~~~Gld~~--~~---~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~ 148 (171)
++++++++++||+++|.+|+++++.++|.++++++|||.+ .+ ++++ .++.+.++++.+. .+.||+|||||+||
T Consensus 111 ~~~~~~~~~alf~a~~~~~~~i~~~~~L~~~a~~~Gl~~~d~~~~~~~~~s-~~~~~~v~~~~~~a~~~gv~G~Ptfvv~ 189 (226)
T 1r4w_A 111 PEMLEKVSRELWMRIWSRDEDITESQNILSAAEKAGMATAQAQHLLNKIST-ELVKSKLRETTGAACKYGAFGLPTTVAH 189 (226)
T ss_dssp GGGHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHTTCCHHHHHHHHTTTTS-HHHHHHHHHHHHHHHHTTCCSSCEEEEE
T ss_pred hHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCCchhHHHHHHHcCC-HHHHHHHHHHHHHHHHCCCCCCCEEEEe
Confidence 7678999999999999999999999999999999999753 23 3445 3456667776654 78999999999999
Q ss_pred ----CeeeeccCCCHHHHHHHHHHH
Q 030793 149 ----GKHELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 149 ----~~~~i~G~~~~~~~~~~l~~~ 169 (171)
|+ .++|+++++.|.+.|.++
T Consensus 190 ~~g~~~-~~~G~~~~~~l~~~l~~~ 213 (226)
T 1r4w_A 190 VDGKTY-MLFGSDRMELLAYLLGEK 213 (226)
T ss_dssp ETTEEE-EEESTTCHHHHHHHHTCC
T ss_pred CCCCcC-ceeCCCcHHHHHHHhcCc
Confidence 65 789999999999988654
No 6
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=99.95 E-value=3e-27 Score=175.06 Aligned_cols=157 Identities=15% Similarity=0.150 Sum_probs=131.3
Q ss_pred CeEEEeecccCCCCCCCCCCHHHHHHHhhCChHHHHHHHHHHHHHhcCCccccC-----CCCCCcHHHHHHHHHHHhcCc
Q 030793 1 MILRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEVFRGLGLEYNMS-----GLTGNTLDSHRLLYLAGQQGL 75 (171)
Q Consensus 1 ~~v~~~P~~L~p~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~-----~~~~~s~~a~r~~~~a~~~g~ 75 (171)
++|+|+||.|.|..+. ..+ + .+..++..++.|+++..|++|+++ ..+.||..|||++.+|+.+|
T Consensus 34 v~v~~~p~~L~~~~~~-~~~--~-------~~~~~~~~~~~r~a~~~G~~f~~~~~~~~~~~~~s~~a~r~~~aa~~~g- 102 (208)
T 3kzq_A 34 IQFEYVVGGLAPDTNL-PMP--P-------EMQQKLEGIWKQIETQLGTKFNYDFWKLCTPVRSTYQSCRAVIAAGFQD- 102 (208)
T ss_dssp SEEEEEECCSSCSCCC-BCC--H-------HHHHHHHHHHHHHHHHHCCCCCTTHHHHSCCBCCCHHHHHHHHHHHTTT-
T ss_pred ceEEEEecccccCCCC-CCC--H-------HHHHHHHHHHHHHHHHHCCcccHHHHhcCCCcCCcHHHHHHHHHHHHhC-
Confidence 5799999999886532 111 1 145778889999999999999987 35689999999999999999
Q ss_pred chHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEEC--Ce
Q 030793 76 DKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLN--GK 150 (171)
Q Consensus 76 ~~~~~~~~~l~~a~~~~g~~i~~~~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~--~~ 150 (171)
..++++++||+++|.+|+++++.++|.++++++|||.+ .+++++ .++.+.++++.+. .+.||+|||||+|+ |+
T Consensus 103 -~~~~~~~~l~~a~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s-~~~~~~v~~~~~~a~~~gv~g~Pt~~v~~~~~ 180 (208)
T 3kzq_A 103 -SYEQMLEAIQHAYYLRAMPPHEEATHLQLAKEIGLNVQQFKNDMDG-TLLEGVFQDQLSLAKSLGVNSYPSLVLQINDA 180 (208)
T ss_dssp -CHHHHHHHHHHHHHTSCCCTTCHHHHHHHHHHTTCCHHHHHHHHTS-HHHHHHHHHHHHHHHHTTCCSSSEEEEEETTE
T ss_pred -CHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHcCCCHHHHHHHHhC-hHHHHHHHHHHHHHHHcCCCcccEEEEEECCE
Confidence 67999999999999999999999999999999999987 577877 3566777777665 78999999999996 45
Q ss_pred e--eeccCCCHHHHHHHHHHHh
Q 030793 151 H--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 151 ~--~i~G~~~~~~~~~~l~~~~ 170 (171)
+ .+.|+++.+.|.++|+++.
T Consensus 181 ~~~~~~g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 181 YFPIEVDYLSTEPTLKLIRERI 202 (208)
T ss_dssp EEEECCCSSCSHHHHHHHHHHH
T ss_pred EEEeeCCCCCHHHHHHHHHHHH
Confidence 5 3579999999999998764
No 7
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=99.94 E-value=1.1e-25 Score=167.13 Aligned_cols=159 Identities=13% Similarity=0.185 Sum_probs=129.7
Q ss_pred CeEEEeecccCCCCCCCCCCHHHHHHHhhCChHHHHHHHHHHHHHhcCCccccC-----CCCCCcHHHHHHHHHHHhcCc
Q 030793 1 MILRWHPFFLNPSAPKEGVNKKDFYENKFGSQNQGIIARMTEVFRGLGLEYNMS-----GLTGNTLDSHRLLYLAGQQGL 75 (171)
Q Consensus 1 ~~v~~~P~~L~p~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~-----~~~~~s~~a~r~~~~a~~~g~ 75 (171)
++|+|+||.|.|..+. ..+ + .+..++..++.++++.+|++|++. .++.||..|+|++.+|+.+++
T Consensus 39 v~v~~~~~~l~~~~~~-~~~--~-------~~~~~~~~~~~r~a~~~g~~~~~~~~~~~~~~~~s~~a~r~~~~a~~~~~ 108 (216)
T 2in3_A 39 LTVKIMPGGLRPGTNT-PLL--P-------EKRAQILHHWHSVHITTGQPFTFENALPEGFIYDTEPACRGVVSVSLIEP 108 (216)
T ss_dssp CEEEEEECC----CCS-BCC--H-------HHHHHHHHHHHHHHHHHCCCCCCTTCSCTTCBCCCHHHHHHHHHHHHHCG
T ss_pred eEEEEeecccccCCCC-CCC--H-------HHHHHHHHHHHHHHHHHCCccChHHHccCCcccCcHHHHHHHHHHHHhCc
Confidence 5799999999886632 111 1 145778889999999999999874 246899999999999998855
Q ss_pred chHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEE--CCe
Q 030793 76 DKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVL--NGK 150 (171)
Q Consensus 76 ~~~~~~~~~l~~a~~~~g~~i~~~~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv--~~~ 150 (171)
++.++++++||+++|.++.++++.++|.++++++|+|.+ .+++++ ......++++.+. .++||+|||||+| ||+
T Consensus 109 ~~~~~~~~~lf~a~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~-~~~~~~v~~~~~~a~~~gv~g~Pt~~i~~~G~ 187 (216)
T 2in3_A 109 EKVFPFFAAIQRAFYVGQEDVAQLAILKKLAVDLGIPESRFTPVFQS-DEAKQRTLAGFQRVAQWGISGFPALVVESGTD 187 (216)
T ss_dssp GGHHHHHHHHHHHHHTTCCCTTSHHHHHHHHHHTTCCHHHHHHHHHS-HHHHHHHHHHHHHHHHTTCCSSSEEEEEETTE
T ss_pred chHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHcCCCHHHHHHHhcc-hHHHHHHHHHHHHHHHcCCcccceEEEEECCE
Confidence 589999999999999999999999999999999999986 567777 3566677776654 7899999999998 999
Q ss_pred e--eeccCCCHHHHHHHHHHHh
Q 030793 151 H--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 151 ~--~i~G~~~~~~~~~~l~~~~ 170 (171)
+ .+.|+++.+.|.+.|+++.
T Consensus 188 ~~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 188 RYLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp EEEEESSCCCHHHHHHHHHHHH
T ss_pred EEEeccCCCCHHHHHHHHHHHH
Confidence 7 6899999999999998764
No 8
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=99.87 E-value=8e-23 Score=148.86 Aligned_cols=149 Identities=17% Similarity=0.202 Sum_probs=117.5
Q ss_pred CCHHHHHHHhhCChHHHHHHHHHHHHHhcCCccccCC--CCCCcHHHHHHHHHHHhc-CcchHHHHHHHHHHHHhhcCC-
Q 030793 19 VNKKDFYENKFGSQNQGIIARMTEVFRGLGLEYNMSG--LTGNTLDSHRLLYLAGQQ-GLDKQHNLAEELFLGYFTQGK- 94 (171)
Q Consensus 19 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~~--~~~~s~~a~r~~~~a~~~-g~~~~~~~~~~l~~a~~~~g~- 94 (171)
....+|+.+.|+ .|..+.+.+.++.+.+++.|...+ +..++..+.|++.+|..+ |....++++++||+++|.++.
T Consensus 24 ~~vvef~d~~Cp-~C~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~aa~a~~Aa~~q~g~~~~~~~~~~lf~a~~~~~~~ 102 (185)
T 3feu_A 24 APVTEVFALSCG-HCRNMENFLPVISQEAGTDIGKMHITFNQSAHIASMFYYAAEMQVDGAPDHAFMEDLFAATQMGEGT 102 (185)
T ss_dssp CSEEEEECTTCH-HHHHHGGGHHHHHHHHTSCCEEEECCSSSHHHHHHHHHHHHHTTSSSSCCHHHHHHHHHHHTCCTTS
T ss_pred CEEEEEECCCCh-hHHHhhHHHHHHHHHhCCeEEEEeccCCccchHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHhccC
Confidence 356677777776 899998889999888766655433 345667788888888765 522368999999999999887
Q ss_pred -CCCCHHHHHHHHHHcCC-chh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeee--ccCCCHHHHHHHHH
Q 030793 95 -YIGDKEFLVECARKVGV-EGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHEL--SGGQPPEVYLRAFQ 167 (171)
Q Consensus 95 -~i~~~~~L~~ia~~~Gl-d~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i--~G~~~~~~~~~~l~ 167 (171)
++++.++|.+++.++|| |.+ .+.+.+ ...+.++++.+. .++||+|||||+|||+|.+ +|+++++.|.++|+
T Consensus 103 ~~~~~~~~L~~~a~~~Gl~d~~~~~~~~~~--~~~~~v~~~~~~a~~~gv~GtPtfvvng~~~v~~~Ga~~~e~~~~~i~ 180 (185)
T 3feu_A 103 TLTEQQEAYSKAFTSRGLVSPYDFNEEQRD--TLIKKVDNAKMLSEKSGISSVPTFVVNGKYNVLIGGHDDPKQIADTIR 180 (185)
T ss_dssp CHHHHHHHHHHHHHTTTCCCGGGCCHHHHH--HHHHHHHHHHHHHHHHTCCSSSEEEETTTEEECGGGCSSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHcCCCccCEEEECCEEEEecCCCCCHHHHHHHHH
Confidence 68899999999999999 876 344443 244566666554 7899999999999999987 89999999999999
Q ss_pred HHh
Q 030793 168 VAA 170 (171)
Q Consensus 168 ~~~ 170 (171)
.+.
T Consensus 181 ~ll 183 (185)
T 3feu_A 181 YLL 183 (185)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 9
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=99.86 E-value=5.1e-22 Score=144.86 Aligned_cols=146 Identities=14% Similarity=0.164 Sum_probs=121.1
Q ss_pred HHHHHHHhhCChHHHHHHHHHHHHHhcCCccccC--C--CCCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCCCC
Q 030793 21 KKDFYENKFGSQNQGIIARMTEVFRGLGLEYNMS--G--LTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYI 96 (171)
Q Consensus 21 ~~~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~--~--~~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~~i 96 (171)
...|....|+ .|..+.+.+.++.+.++..+.+. + +..++..+++++.+|+.+| ++++++++||+++|.++.++
T Consensus 29 i~~f~d~~Cp-~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~~~~aa~a~~aa~~~g--~~~~~~~~lf~~~~~~~~~~ 105 (192)
T 3h93_A 29 VVELFWYGCP-HCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQMFLTLESMG--VEHDVHNAVFEAIHKEHKKL 105 (192)
T ss_dssp EEEEECTTCH-HHHHHHHHHHHHHHTCCTTEEEEEEECCCSTHHHHHHHHHHHHHHHT--CCHHHHHHHHHHHHTSCCCC
T ss_pred EEEEECCCCh-hHHHhhHHHHHHHHhCCCCeEEEEEehhhccchHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHhCcCC
Confidence 3455555665 89999999999999987554443 2 3567788899999998888 89999999999999999999
Q ss_pred CCHHHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeec--cCCCHHHHHHHHHHHh
Q 030793 97 GDKEFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELS--GGQPPEVYLRAFQVAA 170 (171)
Q Consensus 97 ~~~~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~--G~~~~~~~~~~l~~~~ 170 (171)
++.++|.++++++|||.+ .+++++ ......++++.+. .++||+|||||+|||++.+. |+++++.|.++|+.+.
T Consensus 106 ~~~~~l~~~a~~~Gld~~~~~~~~~~-~~~~~~v~~~~~~a~~~gv~gtPt~~vng~~~~~~~G~~~~e~l~~~i~~l~ 183 (192)
T 3h93_A 106 ATPEEMADFLAGKGVDKEKFLSTYNS-FAIKGQMEKAKKLAMAYQVTGVPTMVVNGKYRFDIGSAGGPEETLKLADYLI 183 (192)
T ss_dssp CSHHHHHHHHHTTTCCHHHHHHHHTC-HHHHHHHHHHHHHHHHHTCCSSSEEEETTTEEEEHHHHTSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHhhC-HHHHHHHHHHHHHHHHhCCCCCCeEEECCEEEecccccCCHHHHHHHHHHHH
Confidence 999999999999999987 567877 3566677776664 68999999999999998766 9999999999988764
No 10
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=99.86 E-value=1.7e-21 Score=142.66 Aligned_cols=145 Identities=12% Similarity=0.127 Sum_probs=119.0
Q ss_pred HHHHHHHhhCChHHHHHHHHHHHHHhcCCccccCC----CCCCcHHHHHHHHHHHhcCcchHHH--HHHHHHHHHhhcCC
Q 030793 21 KKDFYENKFGSQNQGIIARMTEVFRGLGLEYNMSG----LTGNTLDSHRLLYLAGQQGLDKQHN--LAEELFLGYFTQGK 94 (171)
Q Consensus 21 ~~~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~~----~~~~s~~a~r~~~~a~~~g~~~~~~--~~~~l~~a~~~~g~ 94 (171)
..+|+...|+ .|..+.+.+.++.+.++..+.+.. +..++..+.+++.+|..+| ..++ ++++||+++|.++.
T Consensus 28 vv~f~d~~Cp-~C~~~~~~l~~~~~~~~~~v~~~~~p~~~~~~~~~aa~a~~aa~~~g--~~~~~~~~~~lf~a~~~~~~ 104 (193)
T 3hz8_A 28 VLEFFGYFCP-HCAHLEPVLSKHAKSFKDDMYLRTEHVVWQKEMLTLARLAAAVDMAA--ADSKDVANSHIFDAMVNQKI 104 (193)
T ss_dssp EEEEECTTCH-HHHHHHHHHHHHHTTCCTTEEEEEEECCCSGGGHHHHHHHHHHHHHT--GGGHHHHHHHHHHHHHTSCC
T ss_pred EEEEECCCCh-hHHHHHHHHHHHHHHCCCCeEEEEecCCCCcccHHHHHHHHHHHHcC--chhHHhHHHHHHHHHHHhCc
Confidence 4456666675 899999999999998875544432 2455678999999998889 6677 99999999999999
Q ss_pred CCCCHHHHHHHHHHc-CCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeeccCCCHHHHHHHHHHHh
Q 030793 95 YIGDKEFLVECARKV-GVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 95 ~i~~~~~L~~ia~~~-Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~~~~ 170 (171)
++++.++|.+++.++ |||.+ .+++++ ......++++.+. .++||+|||||+|||++.+.|+ +++.|.++|+.+.
T Consensus 105 ~~~~~~~l~~~a~~~~Gld~~~~~~~~~s-~~~~~~v~~~~~~a~~~gv~gtPt~vvng~~~~~~~-~~e~l~~~i~~ll 182 (193)
T 3hz8_A 105 KLQNPEVLKKWLGEQTAFDGKKVLAAYES-PESQARADKMQELTETFQIDGVPTVIVGGKYKVEFA-DWESGMNTIDLLA 182 (193)
T ss_dssp CTTSHHHHHHHHHHCTTTTHHHHHHHHHS-HHHHHHHHHHHHHHHHTTCCSSSEEEETTTEEECCS-SHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHccCCCHHHHHHHHcC-HHHHHHHHHHHHHHHHhCCCcCCEEEECCEEEecCC-CHHHHHHHHHHHH
Confidence 999999999999999 99987 577877 3566677776664 7899999999999999877776 9999999888754
No 11
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=99.83 E-value=1.3e-20 Score=138.92 Aligned_cols=147 Identities=12% Similarity=0.081 Sum_probs=114.6
Q ss_pred HHHHHHHhhCChHHHHHHHHHH-HHHhc----CCccccCCCC---CCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhc
Q 030793 21 KKDFYENKFGSQNQGIIARMTE-VFRGL----GLEYNMSGLT---GNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQ 92 (171)
Q Consensus 21 ~~~~~~~~~g~~~~~~~~~~~~-~a~~~----g~~~~~~~~~---~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~ 92 (171)
..+|..+.|+ .|..+.+.+.. +.+.+ .+.|.+..++ .+|..|.+++.++..++++++++++++||++++.+
T Consensus 33 vvef~D~~CP-~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p~~~~~s~~Aa~aa~a~~~~~~~~f~~~~~aLf~~~~~~ 111 (202)
T 3gha_A 33 VVEFGDYKCP-SCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEKQPDT 111 (202)
T ss_dssp EEEEECTTCH-HHHHHHHHTHHHHHHHTTTTTSEEEEEEECCCSHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHCCSS
T ss_pred EEEEECCCCh-hHHHHHHHhhHHHHHHhccCCeEEEEEEecCccchhHHHHHHHHHHHHhhCHHHHHHHHHHHHHhCccc
Confidence 3456666664 78888777643 33443 3556655433 34667777776665555559999999999999999
Q ss_pred CCCCCCHHHHHHHHHH-cCCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeeccCCCHHHHHHHHHH
Q 030793 93 GKYIGDKEFLVECARK-VGVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELSGGQPPEVYLRAFQV 168 (171)
Q Consensus 93 g~~i~~~~~L~~ia~~-~Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~~ 168 (171)
+.++.+.+.|.+++++ +|||.+ .++++++ .+...++++.+. .++||+|||||+|||++ +.|+++++.|.++|++
T Consensus 112 ~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~-~~~~~v~~~~~~a~~~gV~gtPtfvvnG~~-~~G~~~~e~l~~~i~~ 189 (202)
T 3gha_A 112 EQEWVTPGLLGDLAKSTTKIKPETLKENLDKE-TFASQVEKDSDLNQKMNIQATPTIYVNDKV-IKNFADYDEIKETIEK 189 (202)
T ss_dssp SSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHT-TTHHHHHHHHHHHHHTTCCSSCEEEETTEE-CSCTTCHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHhcCCCHHHHHHHHhCh-HHHHHHHHHHHHHHHcCCCcCCEEEECCEE-ecCCCCHHHHHHHHHH
Confidence 9999999999999999 999987 5778774 678888887765 78999999999999996 8899999999999998
Q ss_pred Hh
Q 030793 169 AA 170 (171)
Q Consensus 169 ~~ 170 (171)
+.
T Consensus 190 ~~ 191 (202)
T 3gha_A 190 EL 191 (202)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 12
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=99.82 E-value=1.9e-19 Score=131.02 Aligned_cols=143 Identities=13% Similarity=0.078 Sum_probs=117.1
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHhcCCccccC--C--CCCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCC---C
Q 030793 23 DFYENKFGSQNQGIIARMTEVFRGLGLEYNMS--G--LTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGK---Y 95 (171)
Q Consensus 23 ~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~--~--~~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~---~ 95 (171)
.|....|+ .|..+.+.+.++.+.++..+.+. + +.+++..+++++.+|+.+| +.++++++||+++|.++. +
T Consensus 31 ~f~d~~Cp-~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~s~~a~~a~~~a~~~~--~~~~~~~~lf~~~~~~~~~~~~ 107 (193)
T 2rem_A 31 EIFGYTCP-HCAHFDSKLQAWGARQAKDVRFTLVPAVFGGVWDPFARAYLAADVLG--VAKRSHTAMFEAIHEKGSVPIQ 107 (193)
T ss_dssp EEECTTCH-HHHHHHHHHHHHHHTSCTTEEEEEEECCCSTTHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTTCCSCST
T ss_pred EEECCCCh-hHhhhhHHHHHHHHhcCCceEEEEeCcccCCCcHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHhcccCcC
Confidence 44444554 78889999999988886544442 2 3567889999999999888 899999999999999998 9
Q ss_pred CCCHHHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeeccCCCHHHHHHHHHHHh
Q 030793 96 IGDKEFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 96 i~~~~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~~~~ 170 (171)
+.+.++|.++++++|+|.+ .+++++ ......++++.+. .++||+|||||+|||++.+.|+ +++.|.++|+.+.
T Consensus 108 ~~~~~~l~~~a~~~Gld~~~~~~~~~~-~~~~~~v~~~~~~a~~~gv~gtPt~ving~~~~~g~-~~~~l~~~i~~~~ 183 (193)
T 2rem_A 108 NVGPDELAVFYAGYGVQPDRFVATFNG-PEVEKRFQAARAYALKVRPVGTPTIVVNGRYMVTGH-DFEDTLRITDYLV 183 (193)
T ss_dssp TCCHHHHHHHHHTTTCCHHHHHHHHTS-HHHHHHHHHHHHHHHHHCCSSSSEEEETTTEEECCS-SHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHhC-hHHHHHHHHHHHHHHHhCCCCCCeEEECCEEEecCC-CHHHHHHHHHHHH
Confidence 9999999999999999986 567777 3455667666554 6899999999999999877888 9999999988764
No 13
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=99.82 E-value=3.7e-20 Score=135.15 Aligned_cols=144 Identities=11% Similarity=0.095 Sum_probs=117.3
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHhcCCccccC--C--CCCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCCCCCC
Q 030793 23 DFYENKFGSQNQGIIARMTEVFRGLGLEYNMS--G--LTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGD 98 (171)
Q Consensus 23 ~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~--~--~~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~~i~~ 98 (171)
.|....|+ .|..+.+.+.++.+.++..+.+. + +..+|..+++++.+|..+| +.++++++||+++|.++.++++
T Consensus 28 ~f~d~~Cp-~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~s~~aa~a~~aa~~~~--~~~~~~~~lf~~~~~~~~~~~~ 104 (195)
T 2znm_A 28 EFFGYFCV-HCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSG--LKYQANPAVFKAVYEQKIRLEN 104 (195)
T ss_dssp EEECTTSC-CTTSSCHHHHHHHHHSCTTEEEEEEECCCSGGGHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHCSSCTTS
T ss_pred EEECCCCh-hHHHHhHHHHHHHHHCCCceEEEEeccccCcccHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHhCCCCCC
Confidence 45555665 67777788888888887555543 2 3467889999999998888 8999999999999999999999
Q ss_pred HHHHHHHHHHc-CCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeeccCCCHHHHHHHHHHHh
Q 030793 99 KEFLVECARKV-GVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 99 ~~~L~~ia~~~-Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~~~~ 170 (171)
.++|.++++++ |+|.+ ..++++ ......++++... .++||+|||||+|||++.+.|+.+++.|.+.|+.+.
T Consensus 105 ~~~l~~~a~~~~Gld~~~~~~~~~~-~~~~~~v~~~~~~a~~~gv~gtPt~ving~~~~~g~~~~~~l~~~i~~~l 179 (195)
T 2znm_A 105 RSVAGKWALSQKGFDGKKLMRAYDS-PEAAAAALKMQKLTEQYRIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELV 179 (195)
T ss_dssp HHHHHHHHHTCSSSCHHHHHHHHTS-HHHHHHHHHHHHHHHHTTCCSSSEEEETTTEEECCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHhcC-HHHHHHHHHHHHHHHHcCCCCCCeEEECCEEEEcCCCCHHHHHHHHHHHH
Confidence 99999999999 99986 567777 3455666666554 689999999999999987889888999888887653
No 14
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=99.81 E-value=1e-19 Score=132.71 Aligned_cols=146 Identities=10% Similarity=0.068 Sum_probs=114.2
Q ss_pred CHHHHHHHhhCChHHHHHHHH---HHHHHhcC--CccccCC--C-CCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhh
Q 030793 20 NKKDFYENKFGSQNQGIIARM---TEVFRGLG--LEYNMSG--L-TGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFT 91 (171)
Q Consensus 20 ~~~~~~~~~~g~~~~~~~~~~---~~~a~~~g--~~~~~~~--~-~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~ 91 (171)
...+|+...|+ .|..+.+.+ .++.+.++ +.|.+.. + .+++..+++++.+|+.+| ..+++++++|+++|.
T Consensus 17 ~vvef~d~~Cp-~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~aa~a~~aA~~~g--~~~~~~~~lf~a~~~ 93 (189)
T 3l9v_A 17 AVVEFFSFYCP-PCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSLLGPLGHELTRAWALAMVMK--ETDVIEKAFFTAGMV 93 (189)
T ss_dssp SEEEEECTTCH-HHHHHHHTSCHHHHHHTTCCTTCCEEEEECSSSSTTHHHHHHHHHHHHHHT--CHHHHHHHHHHHHTT
T ss_pred EEEEEECCCCh-hHHHHhHhccchHHHHHhCCCCCEEEEEechhcccccHHHHHHHHHHHHcC--cHHHHHHHHHHHHhh
Confidence 45567777775 898888875 57877665 4444433 3 467888899888888888 789999999999999
Q ss_pred cCCCCCCHHHHHHHHHHc-CCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeecc--CCCH------
Q 030793 92 QGKYIGDKEFLVECARKV-GVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELSG--GQPP------ 159 (171)
Q Consensus 92 ~g~~i~~~~~L~~ia~~~-Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~G--~~~~------ 159 (171)
++. +.+.++|.++++++ |||.+ .++++++ .....++++.+. .+.||+|||||+|||+|.++| ..+.
T Consensus 94 ~~~-~~~~~~l~~~a~~~~Gld~~~~~~~~~s~-~~~~~v~~~~~~a~~~gv~GtPt~~vng~~~v~~~~~~~~~~~~~~ 171 (189)
T 3l9v_A 94 EKR-LHSPDDVRRVFMSATGISRGEYDRSIKSP-AVNDMVALQERLFKEYGVRGTPSVYVRGRYHINNAAFGAFSVENFR 171 (189)
T ss_dssp TCC-CCSHHHHHHHHHHHHCCCHHHHHHHTTSH-HHHHHHHHHHHHHHHTTCCSSSEEEETTTEEECGGGCCCSSHHHHH
T ss_pred hcc-CCCHHHHHHHHHHccCCCHHHHHHHHhhH-HHHHHHHHHHHHHHHhCCCccCEEEECCEEEECccccccccccchH
Confidence 988 99999999999999 99987 5677773 566667776654 789999999999999998865 3443
Q ss_pred HHHHHHHHHHh
Q 030793 160 EVYLRAFQVAA 170 (171)
Q Consensus 160 ~~~~~~l~~~~ 170 (171)
+.|.++|+.+.
T Consensus 172 ~~~~~~i~~Li 182 (189)
T 3l9v_A 172 SRYAAVVRKLL 182 (189)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77888777654
No 15
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=99.81 E-value=1.9e-19 Score=130.61 Aligned_cols=145 Identities=13% Similarity=0.158 Sum_probs=113.6
Q ss_pred HHHHHhhCChHHHHHHHHH-HHHHhc----CCccccCCC---CCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCC
Q 030793 23 DFYENKFGSQNQGIIARMT-EVFRGL----GLEYNMSGL---TGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGK 94 (171)
Q Consensus 23 ~~~~~~~g~~~~~~~~~~~-~~a~~~----g~~~~~~~~---~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~ 94 (171)
.|....|+ .|..+.+.+. .+.+.+ .+.+.+..+ .++|..+++++.++..+|++++++++++||++++.++.
T Consensus 17 ~f~D~~Cp-~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~p~~~~~s~~aa~a~~~a~~~~~~~~~~~~~~lf~~~~~~~~ 95 (186)
T 3bci_A 17 VYGDYKCP-YCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLDFQKQLFAAQQDENK 95 (186)
T ss_dssp EEECTTCH-HHHHHHHHHHHHHHHHTTTTTSSEEEEEECCCSCTTHHHHHHHHHHHHHHCGGGHHHHHHHHHHTCCCTTS
T ss_pred EEECCCCh-hHHHHHHHHHHHHHHHhccCCeEEEEEEecCcCCcchHHHHHHHHHHHHhCHHHHHHHHHHHHhcCcccCC
Confidence 34444453 7777777773 555554 366666443 36889999999999888887899999999999999899
Q ss_pred CCCCHHHHHHHHHHcCCchhH-----hhh--cCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeeccCCCHHHHHHHH
Q 030793 95 YIGDKEFLVECARKVGVEGAA-----EFL--DDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELSGGQPPEVYLRAF 166 (171)
Q Consensus 95 ~i~~~~~L~~ia~~~Gld~~~-----~~~--~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l 166 (171)
++.+.++|.++++++|+|.+. +++ ++ ......++++.+. .++||+|||||+|||+ .+.|..+++.|.++|
T Consensus 96 ~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~-~~~~~~v~~~~~~a~~~gv~GtPt~vvnG~-~~~G~~~~~~l~~~i 173 (186)
T 3bci_A 96 EWLTKELLDKHIKQLHLDKETENKIIKDYKTKD-SKSWKAAEKDKKIAKDNHIKTTPTAFINGE-KVEDPYDYESYEKLL 173 (186)
T ss_dssp CCCCHHHHHHHHHTTCCCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHTTCCSSSEEEETTE-ECSCTTCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHcCCCCCCeEEECCE-EcCCCCCHHHHHHHH
Confidence 999999999999999999752 456 66 3566677776654 7899999999999998 588999999999999
Q ss_pred HHHh
Q 030793 167 QVAA 170 (171)
Q Consensus 167 ~~~~ 170 (171)
+++.
T Consensus 174 ~~~~ 177 (186)
T 3bci_A 174 KDKI 177 (186)
T ss_dssp HC--
T ss_pred HHHH
Confidence 8654
No 16
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=99.81 E-value=1e-19 Score=132.89 Aligned_cols=145 Identities=18% Similarity=0.190 Sum_probs=116.7
Q ss_pred HHHHHHHhhCChHHHHHHHHHHHHHhcCCccccC--C--CCCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCCCC
Q 030793 21 KKDFYENKFGSQNQGIIARMTEVFRGLGLEYNMS--G--LTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYI 96 (171)
Q Consensus 21 ~~~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~--~--~~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~~i 96 (171)
...|....|+ .|..+.+.+.++.+.++..+.+. + +..++..+.+++.++..+| .++++++||+++|.++.++
T Consensus 29 vv~f~d~~Cp-~C~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~s~~aa~a~~aa~~~g---~~~~~~~lf~~~~~~~~~~ 104 (195)
T 3hd5_A 29 VLEFFAYTCP-HCAAIEPMVEDWAKTAPQDVVLKQVPIAFNAGMKPLQQLYYTLQALE---RPDLHPKVFTAIHTERKRL 104 (195)
T ss_dssp EEEEECTTCH-HHHHHHHHHHHHHHTCCTTEEEEEEECCSSGGGHHHHHHHHHHHHTT---CTTHHHHHHHHHHTSCCCC
T ss_pred EEEEECCCCc-cHHHhhHHHHHHHHHCCCCeEEEEEecccCcchHHHHHHHHHHHhcC---HHHHHHHHHHHHHHhccCC
Confidence 3345555665 78999999999999886444432 2 3467888899888888877 6899999999999999999
Q ss_pred CCHHHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeeccCCCH---HHHHHHHHHHh
Q 030793 97 GDKEFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELSGGQPP---EVYLRAFQVAA 170 (171)
Q Consensus 97 ~~~~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~G~~~~---~~~~~~l~~~~ 170 (171)
.+.++|.++++++|+|.+ .+++++ ....+.++++.+. .++||+|||||+|||++.+.|+++. +.|.++|+.+.
T Consensus 105 ~~~~~l~~~a~~~Gld~~~~~~~~~s-~~~~~~v~~~~~~a~~~gv~gtPt~ving~~~~~g~~~~~~~e~~~~~i~~L~ 183 (195)
T 3hd5_A 105 FDKKAMGEWAASQGVDRAKFDSVFDS-FSVQTQVQRASQLAEAAHIDGTPAFAVGGRYMTSPVLAGNDYAGALKVVDQLI 183 (195)
T ss_dssp CSHHHHHHHHHHTTCCHHHHHHHHTC-HHHHHHHHHHHHHHHHTTCCSSSEEEETTTEEECTTTTTGGGTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHHHHHHcC-HHHHHHHHHHHHHHHHhCCCcCceEEECCEEEeCccccCChHHHHHHHHHHHH
Confidence 999999999999999987 567877 3566677776665 7899999999999999888887764 77888887654
No 17
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=99.81 E-value=1.1e-19 Score=132.96 Aligned_cols=145 Identities=14% Similarity=0.136 Sum_probs=113.5
Q ss_pred CHHHHHHHhhCChHHHHHHHH---HHHHHhcC--CccccCC--C-CCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhh
Q 030793 20 NKKDFYENKFGSQNQGIIARM---TEVFRGLG--LEYNMSG--L-TGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFT 91 (171)
Q Consensus 20 ~~~~~~~~~~g~~~~~~~~~~---~~~a~~~g--~~~~~~~--~-~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~ 91 (171)
...+|....|+ .|..+.+.+ .++.+.++ +.+.+.. + .+.+..+.+++.+|+.+| ..++++++||+++|.
T Consensus 24 ~vvef~d~~Cp-~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~~~~~~s~~aa~a~~aA~~~g--~~~~~~~~lf~a~~~ 100 (191)
T 3l9s_A 24 QVLEFFSFYCP-HCYQFEEVLHVSDNVKKKLPEGTKMTKYHVEFLGPLGKELTQAWAVAMALG--VEDKVTVPLFEAVQK 100 (191)
T ss_dssp CEEEEECTTCH-HHHHHHHTSCHHHHHHHHSCTTCCEEEEECSSSSTTHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHT
T ss_pred eEEEEECCCCh-hHHHhChhccchHHHHHhCCCCcEEEEEecccccccCHHHHHHHHHHHHcC--cHHHHHHHHHHHHHh
Confidence 45567777775 898888876 58888875 4555433 3 356788888888888888 788999999999999
Q ss_pred cCCCCCCHHHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeec--cCCCH------H
Q 030793 92 QGKYIGDKEFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELS--GGQPP------E 160 (171)
Q Consensus 92 ~g~~i~~~~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~--G~~~~------~ 160 (171)
++. +++.++|.++++++|||.+ .++++++ .....++++.+. .++||+|||||+|||+|.+. |..+. +
T Consensus 101 ~~~-~~~~~~L~~~a~~~Gld~~~~~~~~~s~-~~~~~v~~~~~~a~~~gv~gtPtfvvnG~~~v~~~~~~~~~~~~~~~ 178 (191)
T 3l9s_A 101 TQT-VQSAADIRKVFVDAGVKGEDYDAAWNSF-VVKSLVAQQEKAAADLQLQGVPAMFVNGKYQINPQGMDTSSMDVFVQ 178 (191)
T ss_dssp SCC-CSSHHHHHHHHHHTTCCHHHHHHHHTSH-HHHHHHHHHHHHHHHTTCCSSSEEEETTTEEECGGGSCCSSHHHHHH
T ss_pred cCC-CCCHHHHHHHHHHcCCCHHHHHHHHhCH-HHHHHHHHHHHHHHHhCCcccCEEEECCEEEECccccCCccchhhHH
Confidence 887 9999999999999999987 5778773 566667776664 78999999999999998774 56664 4
Q ss_pred HHHHHHHHH
Q 030793 161 VYLRAFQVA 169 (171)
Q Consensus 161 ~~~~~l~~~ 169 (171)
.+.++|+.+
T Consensus 179 ~~~~~i~~L 187 (191)
T 3l9s_A 179 QYADTVKYL 187 (191)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 677777654
No 18
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=99.79 E-value=4.9e-19 Score=127.59 Aligned_cols=146 Identities=12% Similarity=0.099 Sum_probs=116.0
Q ss_pred HHHHHHHhhCChHHHHHHHHHHHHHhcCCcccc--C--CCC--CCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCC
Q 030793 21 KKDFYENKFGSQNQGIIARMTEVFRGLGLEYNM--S--GLT--GNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGK 94 (171)
Q Consensus 21 ~~~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~--~--~~~--~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~ 94 (171)
..+|..+.|+ .|..+.+.+.++.+.++....+ . ++. ..+..+.++..++...+ ..+.++..+|.+++.++.
T Consensus 25 vvEf~dy~Cp-~C~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~--~~~~~~~~~~~~~~~~~~ 101 (184)
T 4dvc_A 25 VSEFFSFYCP-HCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIALE--VEDKMVPVMFNRIHTLRK 101 (184)
T ss_dssp EEEEECTTCH-HHHHHHHHHHHHHHTSCTTCEEEEEECSSSSGGGHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHTSCC
T ss_pred EEEEECCCCH-hHHHHhHHHHHHHhhcCCceEEEEEecCCCCCchHHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHhh
Confidence 4566666675 8999999999999887654332 2 232 33445556666666778 889999999999999999
Q ss_pred CCCCHHHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeec--cCCCHHHHHHHHHHH
Q 030793 95 YIGDKEFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELS--GGQPPEVYLRAFQVA 169 (171)
Q Consensus 95 ~i~~~~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~--G~~~~~~~~~~l~~~ 169 (171)
+..+.+.|.+++++.|+|.+ .+++++ .++.+.|+++.+. .++||+|||||+|||+|.+. |+.+++.|.++|+.+
T Consensus 102 ~~~~~~~l~~~a~~~Gld~~~~~~~~~s-~~~~~~v~~~~~~a~~~gv~gTPtfiINGky~v~~~~~~s~e~~~~~i~~L 180 (184)
T 4dvc_A 102 PPKDEQELRQIFLDEGIDAAKFDAAYNG-FAVDSMVHRFDKQFQDSGLTGVPAVVVNNRYLVQGQSAKSLDEYFDLVNYL 180 (184)
T ss_dssp CCSSHHHHHHHHHTTTCCHHHHHHHHTS-HHHHHHHHHHHHHHHHHTCCSSSEEEETTTEEECGGGCSSHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHhCCCHHHHHHHHhC-HHHHHHHHHHHHHHHHcCCCcCCEEEECCEEeeCCcCCCCHHHHHHHHHHH
Confidence 99999999999999999987 678888 3566777776664 78999999999999998774 578999999999876
Q ss_pred h
Q 030793 170 A 170 (171)
Q Consensus 170 ~ 170 (171)
.
T Consensus 181 l 181 (184)
T 4dvc_A 181 L 181 (184)
T ss_dssp T
T ss_pred H
Confidence 5
No 19
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=99.76 E-value=1.4e-18 Score=126.04 Aligned_cols=142 Identities=13% Similarity=0.112 Sum_probs=108.3
Q ss_pred HHHHHHhhCChHHHHHHHHHHHHHhc--C-CccccCC----CCCCcHHHHHHHHHHHhcCc--chHHHHHHHHHHHH--h
Q 030793 22 KDFYENKFGSQNQGIIARMTEVFRGL--G-LEYNMSG----LTGNTLDSHRLLYLAGQQGL--DKQHNLAEELFLGY--F 90 (171)
Q Consensus 22 ~~~~~~~~g~~~~~~~~~~~~~a~~~--g-~~~~~~~----~~~~s~~a~r~~~~a~~~g~--~~~~~~~~~l~~a~--~ 90 (171)
.+|..+.|. .|..+.+.+..+.+.+ | +.+.+.. +.++|..++|++.+|..+++ +++++|+++||+.. |
T Consensus 19 v~f~D~~Cp-~C~~~~~~~~~~l~~~~~g~v~~v~r~~p~~~h~~s~~aaraa~aa~~~~~~~~~f~~~~~aLf~~q~~~ 97 (182)
T 3gn3_A 19 EVFLEPTCP-FSVKAFFKLDDLLAQAGEDNVTVRIRLQSQPWHMFSGVIVRCILAAATLEGGKESAKAVMTAVASHREEF 97 (182)
T ss_dssp EEEECTTCH-HHHHHHTTHHHHHHHHCTTTEEEEEEECCCTTSTTHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHTGGGG
T ss_pred EEEECCCCH-hHHHHHHHHHHHHHHhCCCCEEEEEEEcCCCCCccHHHHHHHHHHHHHhccChHHHHHHHHHHHhcCccc
Confidence 345555554 7777777766655543 2 4444432 35788899999998887743 68999999999985 3
Q ss_pred h-------cCCCCCCHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeee--eccCCCHH
Q 030793 91 T-------QGKYIGDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHE--LSGGQPPE 160 (171)
Q Consensus 91 ~-------~g~~i~~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~--i~G~~~~~ 160 (171)
. ..+++++.++|.++++.+|+|.+. ++++ .+..+.++.+.+. .++||+|||||+|||++. ++|+++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~l~~~a~~~Gld~~~-~l~~-~~~~~~v~~~~~~a~~~GV~gtPtf~ing~~~~~~s~~~~~e 175 (182)
T 3gn3_A 98 EFEHHAGGPNLDATPNDIIARIERYSGLALAE-AFAN-PELEHAVKWHTKYARQNGIHVSPTFMINGLVQPGMSSGDPVS 175 (182)
T ss_dssp SCBTTTBSGGGGCCHHHHHHHHHHHHTCCCHH-HHHC-GGGHHHHHHHHHHHHHHTCCSSSEEEETTEECTTCCTTSCHH
T ss_pred ccccccccccCCCCHHHHHHHHHHHhCCCHHH-HhcC-hHHHHHHHHHHHHHHHCCCCccCEEEECCEEccCCCCCCCHH
Confidence 2 247888899999999999999873 4777 4677788877664 789999999999999964 68999999
Q ss_pred HHHHHH
Q 030793 161 VYLRAF 166 (171)
Q Consensus 161 ~~~~~l 166 (171)
.|.+.|
T Consensus 176 ~w~~~l 181 (182)
T 3gn3_A 176 KWVSDI 181 (182)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999876
No 20
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=99.74 E-value=1e-18 Score=127.14 Aligned_cols=147 Identities=12% Similarity=0.090 Sum_probs=108.3
Q ss_pred HHHHHhhCChHHHHHHHH-HHHHHhcCCccccCC--C---CCCcHHHHHHHHHHHhc----Cc------chHHHHHHHHH
Q 030793 23 DFYENKFGSQNQGIIARM-TEVFRGLGLEYNMSG--L---TGNTLDSHRLLYLAGQQ----GL------DKQHNLAEELF 86 (171)
Q Consensus 23 ~~~~~~~g~~~~~~~~~~-~~~a~~~g~~~~~~~--~---~~~s~~a~r~~~~a~~~----g~------~~~~~~~~~l~ 86 (171)
+++...|+ .|..+.+.+ .++.+.++..+++.. + ...+..+.++...+... +- ...++++++||
T Consensus 23 ef~d~~CP-~C~~~~~~l~~~l~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 101 (195)
T 3c7m_A 23 KVFSYACP-FCYKYDKAVTGPVSEKVKDIVAFTPFHLETKGEYGKQASEVFAVLINKDKAAGISLFDANSQFKKAKFAYY 101 (195)
T ss_dssp EEECTTCH-HHHHHHHHTHHHHHHHTTTTCEEEEEECTTSSTTHHHHHHHHHHHHHHHHHTTCCTTSTTCHHHHHHHHHH
T ss_pred EEEeCcCc-chhhCcHHHHHHHHHhCCCceEEEEEecCccccccHHHHHHHHHHHHhhhhcCCCchhHHHHHHHHHHHHH
Confidence 44444443 788888888 888888875555432 1 12344555544444322 21 13579999999
Q ss_pred HHHhhcCCCCCCHHHHHHH----HHHcCCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeec--cCC
Q 030793 87 LGYFTQGKYIGDKEFLVEC----ARKVGVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELS--GGQ 157 (171)
Q Consensus 87 ~a~~~~g~~i~~~~~L~~i----a~~~Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~--G~~ 157 (171)
+++|.+++++++.++|.++ ++++|+|.+ .+++++ .++...++++.+. .+.||+|||||+|||++.+. |++
T Consensus 102 ~a~~~~~~~~~~~~~l~~~~~~~a~~~Gld~~~~~~~~~~-~~~~~~v~~~~~~a~~~gv~gtPt~~ing~~~~~~~g~~ 180 (195)
T 3c7m_A 102 AAYHDKKERWSDGKDPAAFIKTGLDAAGMSQADFEAALKE-PAVQETLEKWKASYDVAKIQGVPAYVVNGKYLIYTKSIK 180 (195)
T ss_dssp HHHHTSCCCTTTTTCHHHHHHHHHHHHTCCHHHHHHHHTS-HHHHHHHHHGGGHHHHHHHHCSSEEEETTTEEECGGGCC
T ss_pred HHHHhcCCCCCCHHHHHHHHHhHHHHcCCCHHHHHHHHcC-hHHHHHHHHHHHHHHHcCCCccCEEEECCEEEeccCCCC
Confidence 9999999999999999999 999999987 567777 3455566665554 67999999999999997665 999
Q ss_pred CHHHHHHHHHHHhC
Q 030793 158 PPEVYLRAFQVAAN 171 (171)
Q Consensus 158 ~~~~~~~~l~~~~~ 171 (171)
+++.|.++|+.+.+
T Consensus 181 ~~~~l~~~i~~~l~ 194 (195)
T 3c7m_A 181 SIDAMADLIRELAS 194 (195)
T ss_dssp CHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999998753
No 21
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.73 E-value=1.5e-17 Score=119.24 Aligned_cols=138 Identities=15% Similarity=0.148 Sum_probs=110.5
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHhcCC-ccccCC---CCCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCCCCCC
Q 030793 23 DFYENKFGSQNQGIIARMTEVFRGLGL-EYNMSG---LTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGD 98 (171)
Q Consensus 23 ~~~~~~~g~~~~~~~~~~~~~a~~~g~-~~~~~~---~~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~~i~~ 98 (171)
.|....|+ .|..+.+.+.++.+++|- .+.+.. ..++|..+++++.++..++ ++++++++||+ .+.++ +
T Consensus 28 ~f~d~~Cp-~C~~~~~~l~~l~~~~~~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~--~~~~~~~~lf~----~~~~~-~ 99 (175)
T 3gyk_A 28 EFFDYNCP-YCRRAMAEVQGLVDADPNVRLVYREWPILGEGSDFAARAALAARQQG--KYEAFHWALMG----MSGKA-N 99 (175)
T ss_dssp EEECTTCH-HHHHHHHHHHHHHHHCTTEEEEEEECCCSCHHHHHHHHHHHHGGGGT--CHHHHHHHHHT----CSSCC-S
T ss_pred EEECCCCc-cHHHHHHHHHHHHHhCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHh--HHHHHHHHHHh----cCCCC-C
Confidence 44455554 899999999999887763 444433 2467889999999998887 89999999887 34555 7
Q ss_pred HHHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeeccCCCHHHHHHHHHHHh
Q 030793 99 KEFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 99 ~~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~~~~ 170 (171)
.+.|.++++++|+|.+ .+++++ ......++++.+. .++||+|||||+|||+ .+.|+.+++.|.+.|+++.
T Consensus 100 ~~~l~~~a~~~Gld~~~~~~~~~~-~~~~~~v~~~~~~a~~~gv~gtPt~~i~g~-~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 100 ETGVLRIAREVGLDTEQLQRDMEA-PEVTAHIAQSMALAQKLGFNGTPSFVVEDA-LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHTTC-HHHHHHHHHHHHHHHHHTCCSSSEEEETTE-EECSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhC-hHHHHHHHHHHHHHHHcCCccCCEEEECCE-EeeCCCCHHHHHHHHHHHH
Confidence 8899999999999987 577877 3566667776654 7899999999999998 6899999999999998864
No 22
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=99.69 E-value=9.4e-18 Score=125.64 Aligned_cols=144 Identities=10% Similarity=0.106 Sum_probs=105.4
Q ss_pred HHHHHHhhCChHHHHHHHH-HHHHHhc----CCccccCCC--CCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCC
Q 030793 22 KDFYENKFGSQNQGIIARM-TEVFRGL----GLEYNMSGL--TGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGK 94 (171)
Q Consensus 22 ~~~~~~~~g~~~~~~~~~~-~~~a~~~----g~~~~~~~~--~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~ 94 (171)
.+|..+.|+ .|..+.+.+ ..+.+++ .+.+.+..+ .+.|..|++++.++..++ ++++++++||++....+.
T Consensus 44 vef~Dy~CP-~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p~~~~s~~Aa~aa~aa~~~~--~f~~~~~aLF~~q~~~~~ 120 (226)
T 3f4s_A 44 IEYASLTCY-HCSLFHRNVFPKIKEKYIDTGKMLYIFRHFPLDYRGLKAAMLSHCYEKQE--DYFNFNKAVFNSIDSWNY 120 (226)
T ss_dssp EEEECTTCH-HHHHHHHHTHHHHHHHHTTTTSEEEEEEECCCSHHHHHHHHHGGGCCSHH--HHHHHHHHHHHTGGGSCS
T ss_pred EEEECCCCH-HHHHHHHHHHHHHHHHcccCCeEEEEEEeCCCChhHHHHHHHHHHhhChH--HHHHHHHHHHHhCHhhcc
Confidence 355556664 788877654 4555544 355555443 345666666666655455 899999999999755433
Q ss_pred -CCCCHHHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHHH-hh-CCCCcccEEEE---CCeeeeccCCC--------
Q 030793 95 -YIGDKEFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELKK-YS-ANISGVPHFVL---NGKHELSGGQP-------- 158 (171)
Q Consensus 95 -~i~~~~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~~-~~-~gv~gvPtfvv---~~~~~i~G~~~-------- 158 (171)
++++.++|.++|+++|+|.+ .+++++ ......++++.+. .+ +||+|||||+| ||++ +.|+++
T Consensus 121 ~~~~~~~~L~~iA~~~Gld~~~~~~~l~s-~~~~~~v~~~~~~a~~~~GV~GtPtfvv~~~nG~~-~~Ga~~~~~~G~~~ 198 (226)
T 3f4s_A 121 YNLSDLTLLQRIAALSNLKQDAFNQCIND-KKIMDKIVNDKSLAINKLGITAVPIFFIKLNDDKS-YIEHNKVKHGGYKE 198 (226)
T ss_dssp SSTTCCHHHHHHHHHTTCCHHHHHHHHTC-HHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCTTC-CCCGGGGEEESCCC
T ss_pred cccCcHHHHHHHHHHcCCCHHHHHHHHhC-HHHHHHHHHHHHHHHHHcCCCcCCEEEEEcCCCEE-eeCCCCcccccccC
Confidence 36788999999999999987 578887 4567777777664 67 99999999999 9984 566666
Q ss_pred HHHHHHHHHHHh
Q 030793 159 PEVYLRAFQVAA 170 (171)
Q Consensus 159 ~~~~~~~l~~~~ 170 (171)
++.|.++|+++.
T Consensus 199 ~e~l~~~I~~~l 210 (226)
T 3f4s_A 199 LKYFTNVIDKLY 210 (226)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 23
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=99.62 E-value=1.9e-16 Score=116.87 Aligned_cols=145 Identities=10% Similarity=0.087 Sum_probs=98.8
Q ss_pred HHHHHHHhhCChHHHHHHHHHHHHH-hc----CCccccCCCC--CCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcC
Q 030793 21 KKDFYENKFGSQNQGIIARMTEVFR-GL----GLEYNMSGLT--GNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQG 93 (171)
Q Consensus 21 ~~~~~~~~~g~~~~~~~~~~~~~a~-~~----g~~~~~~~~~--~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g 93 (171)
..+|..+.|+ .|+.+.+.+...-+ .+ .+.+.+..++ +++..|.. ++...+++++++|+++||...-..+
T Consensus 19 ivef~D~~Cp-~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~pl~~~s~~aa~---aa~~~~~~~f~~~~~~Lf~~q~~~~ 94 (205)
T 3gmf_A 19 LVEFVSYTCP-HCSHFEIESEGQLKIGMVQPGKGAIEVRNFVRDPIDMTVAL---ITNCVPPSRFFTLHTAFMRSQAQWI 94 (205)
T ss_dssp EEEEECTTCH-HHHHHHHHHHHHHHHHTTTTTSEEEEEEECCCSHHHHHHHH---HHHHSCHHHHHHHHHHHHHTHHHHC
T ss_pred EEEEECCCCH-HHHHHHHHHHHHHHHHhccCCeEEEEEEeCCCCcchHHHHH---HHHhcCHhHHHHHHHHHHHcCHHHH
Confidence 3456666665 67777766654433 33 2445554443 34444433 3333345599999999998754211
Q ss_pred ---CCCC--------------------CHHHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHH-H-hhCCCCcccEEE
Q 030793 94 ---KYIG--------------------DKEFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELK-K-YSANISGVPHFV 146 (171)
Q Consensus 94 ---~~i~--------------------~~~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~-~-~~~gv~gvPtfv 146 (171)
.+++ +.++|.++++++|||.+ .+++++ ..+...++++.+ + .++||+|||||+
T Consensus 95 ~~~~~~~~~~~~~w~~~~~~~~l~~ia~~~~L~~~a~~~Gld~~~~~~~l~s-~~~~~~v~~~~~~a~~~~GV~GtPtfv 173 (205)
T 3gmf_A 95 GPLANSTEAQRQRWFNGTFATRTRAIASDFRFYDFMAARGMDRSTLDRCLSN-EALAKKLAAETDEAINQYNVSGTPSFM 173 (205)
T ss_dssp HHHHHCCHHHHHTTSSSCHHHHHHHHHHHTTHHHHHHTTTCCHHHHHHHHTC-HHHHHHHHHHHHHHHHHHCCCSSSEEE
T ss_pred hcccccchhhhhccccchhHHHHHhccCHHHHHHHHHHcCCCHHHHHHHHcC-HHHHHHHHHHHHHHHHHcCCccCCEEE
Confidence 1122 22457788888999987 578887 356677877665 3 679999999999
Q ss_pred ECCeeeeccCCCHHHHHHHHHHHhC
Q 030793 147 LNGKHELSGGQPPEVYLRAFQVAAN 171 (171)
Q Consensus 147 v~~~~~i~G~~~~~~~~~~l~~~~~ 171 (171)
|||+ .+.|+++++.|.++|+++.+
T Consensus 174 vng~-~~~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 174 IDGI-LLAGTHDWASLRPQILARLN 197 (205)
T ss_dssp ETTE-ECTTCCSHHHHHHHHHHHHT
T ss_pred ECCE-EEeCCCCHHHHHHHHHHHhh
Confidence 9998 58999999999999998764
No 24
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=99.36 E-value=3.2e-12 Score=91.34 Aligned_cols=133 Identities=11% Similarity=0.127 Sum_probs=87.4
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHhc----CCccccCCCC--CCcHHHHHHHH-HHHhcCcchHHHHHHHHHHHHhhcCCC
Q 030793 23 DFYENKFGSQNQGIIARMTEVFRGL----GLEYNMSGLT--GNTLDSHRLLY-LAGQQGLDKQHNLAEELFLGYFTQGKY 95 (171)
Q Consensus 23 ~~~~~~~g~~~~~~~~~~~~~a~~~----g~~~~~~~~~--~~s~~a~r~~~-~a~~~g~~~~~~~~~~l~~a~~~~g~~ 95 (171)
.|....|+ .|..+.+.+.++.+++ .+.+.+..++ ..+..+..++. ++...+++++++++++||+++...+ +
T Consensus 33 ~f~D~~Cp-~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~-~ 110 (175)
T 1z6m_A 33 EFINVRCP-YCRKWFEESEELLAQSVKSGKVERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFATQDEWG-N 110 (175)
T ss_dssp EEECTTCH-HHHHHHHHHHHHHHHHHHTTSEEEEEEECCCCSTTTHHHHHHHTTCCTTCHHHHHHHHHHHHHTHHHHT-T
T ss_pred EEECCCCc-chHHHHHHHHHHHHHHhhCCcEEEEEEeCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHcChhhc-c
Confidence 34445554 7888888887776665 3555554432 22333322221 1112334488999999999875544 3
Q ss_pred CCCHHHHHHHH-HHcCCchhHhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeeccCCCHHHHHHHHH
Q 030793 96 IGDKEFLVECA-RKVGVEGAAEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELSGGQPPEVYLRAFQ 167 (171)
Q Consensus 96 i~~~~~L~~ia-~~~Gld~~~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~ 167 (171)
+ +.+.|.+++ +++|+|.+ . ....+++..+. .++||+|||||+|||+ .+.|+.+++.|.++|+
T Consensus 111 ~-~~~~l~~~a~~~~Gld~~----~----~~~~~~~~~~~a~~~gv~gtPt~vvng~-~~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 111 L-TLEEVATYAEKNLGLKEQ----K----DATLVSAVIAEANAAHIQFVPTIIIGEY-IFDESVTEEELRGYIE 174 (175)
T ss_dssp S-CHHHHHHHHHHTSCCCCC----C----CHHHHHHHHHHHHHHTCCSSCEEEETTE-EECTTCCHHHHHHHHT
T ss_pred C-CHHHHHHHHHHhcCCCcc----c----CHHHHHHHHHHHHHcCCCCcCeEEECCE-EccCCCCHHHHHHHhc
Confidence 4 677888886 46899864 1 12344444443 6899999999999998 5889999999998875
No 25
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=99.04 E-value=7.8e-10 Score=80.81 Aligned_cols=60 Identities=20% Similarity=0.273 Sum_probs=49.2
Q ss_pred CCCCCHHHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeec
Q 030793 94 KYIGDKEFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELS 154 (171)
Q Consensus 94 ~~i~~~~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~ 154 (171)
++|+|.++|.+++.++|||.+ .++++++ .....+++.... ..+||+|||+|+|||+|.+.
T Consensus 1 ~~i~d~~~L~~~a~~~Gld~~~~~~~l~s~-~~~~~v~~~~~~a~~~gi~gvP~fvingk~~~~ 63 (197)
T 1un2_A 1 QTIRSASDIRDVFINAGIKGEEYDAAWNSF-VVKSLVAQQEKAAADVQLRGVPAMFVNGKYQLN 63 (197)
T ss_dssp CCCSSHHHHHHHHHHHTCCHHHHHHHHTSH-HHHHHHHHHHHHHHHTTCCSSSEEEETTTEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCHHHHHHHHhCH-HHHHHHHHHHHHHHHcCCCcCCEEEEcceEecC
Confidence 479999999999999999987 5778773 455666665443 68999999999999998775
No 26
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.41 E-value=7.6e-08 Score=72.24 Aligned_cols=121 Identities=6% Similarity=-0.096 Sum_probs=76.2
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHhcCCccccCCC---CCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCCCCCCH
Q 030793 23 DFYENKFGSQNQGIIARMTEVFRGLGLEYNMSGL---TGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDK 99 (171)
Q Consensus 23 ~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~~~---~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~~i~~~ 99 (171)
.|.+..|+ .|+.+.+.+..+.+..++.+.+..+ .++|..+.+++.++...+ +++.+++.+|.. .
T Consensus 103 ~F~D~~Cp-~C~~~~~~l~~~~~~g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~--~~~~~~~~~~~~---~------- 169 (241)
T 1v58_A 103 VFADPFCP-YCKQFWQQARPWVDSGKVQLRTLLVGVIKPESPATAAAILASKDPA--KTWQQYEASGGK---L------- 169 (241)
T ss_dssp EEECTTCH-HHHHHHHHHHHHHHTTSEEEEEEECCCSSTTHHHHHHHHHHSSSHH--HHHHHHHHTTTC---C-------
T ss_pred EEECCCCh-hHHHHHHHHHHHHhCCcEEEEEEECCcCCCcHHHHHHHHHHccCHH--HHHHHHHHHhcc---C-------
Confidence 34455565 7899999998888765566654332 456777777666655444 777777766542 1
Q ss_pred HHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEEC---Cee-eeccCCCHHHHHHHHHHH
Q 030793 100 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLN---GKH-ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 100 ~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~---~~~-~i~G~~~~~~~~~~l~~~ 169 (171)
|++... ..+ ......+.++.+. .++||.|||||+++ |++ .+.|+.+.+.|.+.|++.
T Consensus 170 ----------~l~~~~--~~~-~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~~~~~G~~~~~~L~~~l~~~ 231 (241)
T 1v58_A 170 ----------KLNVPA--NVS-TEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGNK 231 (241)
T ss_dssp ----------CCCCCS--SCC-HHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEEEEEESSCCHHHHHHHTTC-
T ss_pred ----------CCCccc--cCC-HHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCEEEecCCCCHHHHHHHHHHH
Confidence 233210 011 1122345554443 67999999999996 453 578999999999988754
No 27
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.08 E-value=7.1e-06 Score=60.15 Aligned_cols=114 Identities=17% Similarity=0.167 Sum_probs=66.7
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHhcCCccccCCCC---CCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCCCCCCH
Q 030793 23 DFYENKFGSQNQGIIARMTEVFRGLGLEYNMSGLT---GNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDK 99 (171)
Q Consensus 23 ~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~~~~---~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~~i~~~ 99 (171)
.|....|+ .|+.+.+.+.++.+. |+.+.+..++ .++..+.++..+....+ ....+++. | . +.++
T Consensus 92 ~F~d~~Cp-~C~~~~~~l~~~~~~-~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d--~~~a~~~~-~----~-~~~~--- 158 (211)
T 1t3b_A 92 VFMDITCH-YCHLLHQQLKEYNDL-GITVRYLAFPRAGMNNQTAKQMEAIWTAKD--PVFALNEA-E----K-GNLP--- 158 (211)
T ss_dssp EEECTTCH-HHHHHHTTHHHHHHT-TEEEEEEECCSSTTCSHHHHHHHHHHHSSS--HHHHHHHH-H----T-TCCC---
T ss_pred EEECCCCH-hHHHHHHHHHHHHhC-CcEEEEEECCccCCCchHHHHHHHHHhCcC--HHHHHHHH-H----c-CCCC---
Confidence 34445565 788888888887664 6666543221 22332222222111233 44444433 2 1 2221
Q ss_pred HHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEE-CCeeeeccCCCHHHHHHHHHHHh
Q 030793 100 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKK-YSANISGVPHFVL-NGKHELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 100 ~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv-~~~~~i~G~~~~~~~~~~l~~~~ 170 (171)
+. .. ....+.++.+. .++||.|||||++ ||+ .+.|+.+.+.|.+.|+++.
T Consensus 159 ------------~~-----~~---~~~~v~~~~~l~~~~gV~gTPt~vi~nG~-~~~G~~~~~~l~~~l~~~~ 210 (211)
T 1t3b_A 159 ------------KE-----VK---TPNIVKKHYELGIQFGVRGTPSIVTSTGE-LIGGYLKPADLLRALEETA 210 (211)
T ss_dssp ------------SS-----CC---CSSHHHHHHHHHHHHTCCSSCEEECTTSC-CCCSCCCHHHHHHHHHHCC
T ss_pred ------------Ch-----HH---HHHHHHHHHHHHHHcCCCcCCEEEEeCCE-EecCCCCHHHHHHHHHhcc
Confidence 10 11 12356665554 6899999999999 787 6889999999999998753
No 28
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.03 E-value=4.1e-06 Score=58.17 Aligned_cols=112 Identities=15% Similarity=0.172 Sum_probs=67.7
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHhcCCccccC--C---CCCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCCCCC
Q 030793 23 DFYENKFGSQNQGIIARMTEVFRGLGLEYNMS--G---LTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIG 97 (171)
Q Consensus 23 ~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~--~---~~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~~i~ 97 (171)
.|.+..|+ .|+.+.+.+.++ ..+.+.+. + +.++|..+.+++.++..++ +.+ .+ ++. .|. +
T Consensus 20 ~f~D~~Cp-~C~~~~~~l~~l---~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~--~a~--~~-~~~----~g~-~- 84 (147)
T 3gv1_A 20 VFSDPDCP-FCKRLEHEFEKM---TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRA--KAW--TD-WMR----KGK-F- 84 (147)
T ss_dssp EEECTTCH-HHHHHHHHHTTC---CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHH--HHH--HH-HHH----HCC-C-
T ss_pred EEECCCCh-hHHHHHHHHhhc---CceEEEEEEccccccChhHHHHHHHHHcCCCHH--HHH--HH-HHh----CCC-C-
Confidence 44455565 677777777654 22333332 2 3467777777666554333 332 22 332 221 1
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEE-CCeeeeccCCCHHHHHHHHHHHh
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKK-YSANISGVPHFVL-NGKHELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv-~~~~~i~G~~~~~~~~~~l~~~~ 170 (171)
+.. + .+....++++.+. .++||+|||||++ ||+ .+.|+++.+.|.++|+++.
T Consensus 85 --------------~~~-----~-~~~~~~v~~~~~la~~~gI~gtPt~vi~nG~-~i~G~~~~~~l~~~i~~~~ 138 (147)
T 3gv1_A 85 --------------PVG-----G-SICDNPVAETTSLGEQFGFNGTPTLVFPNGR-TQSGYSPMPQLEEIIRKNQ 138 (147)
T ss_dssp --------------CTT-----C-CCCSCSHHHHHHHHHHTTCCSSCEEECTTSC-EEESCCCTTHHHHHHHHTS
T ss_pred --------------CCc-----c-HHHHHHHHHHHHHHHHhCCCccCEEEEECCE-EeeCCCCHHHHHHHHHHHH
Confidence 111 1 1122356666554 6899999999999 676 6899999999999998764
No 29
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.87 E-value=2e-05 Score=57.84 Aligned_cols=113 Identities=15% Similarity=0.202 Sum_probs=64.7
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHhcCCccccCCC-----CCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCCCCC
Q 030793 23 DFYENKFGSQNQGIIARMTEVFRGLGLEYNMSGL-----TGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIG 97 (171)
Q Consensus 23 ~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~~~-----~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~~i~ 97 (171)
.|...+|+ .|+.+.+.+.++.+. ++.+.+..+ .+++....+++.++. + ....+++.++. .+
T Consensus 92 ~F~d~~Cp-~C~~~~~~l~~l~~~-~v~v~~~~~p~~~~~~~s~~~a~a~~~a~--d--~~~~~~~~~~~----~~---- 157 (216)
T 1eej_A 92 VFTDITCG-YCHKLHEQMADYNAL-GITVRYLAFPRQGLDSDAEKEMKAIWCAK--D--KNKAFDDVMAG----KS---- 157 (216)
T ss_dssp EEECTTCH-HHHHHHTTHHHHHHT-TEEEEEEECCTTCSSSHHHHHHHHHHTSS--S--HHHHHHHHHTT----CC----
T ss_pred EEECCCCH-HHHHHHHHHHHHHhC-CcEEEEEECCccCCCchHHHHHHHHHhcc--C--HHHHHHHHHhC----CC----
Confidence 34445565 788999989888764 666554322 223333333332221 2 44444443321 11
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHH-hhCCCCcccEEEECCeeeeccCCCHHHHHHHHHHHh
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKK-YSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~~~~ 170 (171)
++.. . ....+.++.+. .++||.|||||++.+.+.+.|+.+.+.|.+.|+++.
T Consensus 158 -------------~~~~-~-------~~~~v~~~~~l~~~~gV~gtPt~v~~dG~~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 158 -------------VAPA-S-------CDVDIADHYALGVQLGVSGTPAVVLSNGTLVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp -------------CCCC-C-------CSCCHHHHHHHHHHHTCCSSSEEECTTSCEEESCCCHHHHHHHHHHHH
T ss_pred -------------CChh-H-------HHHHHHHHHHHHHHcCCCccCEEEEcCCeEecCCCCHHHHHHHHHHhh
Confidence 2210 1 11234444433 579999999999944357899999999999988754
No 30
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.29 E-value=0.00025 Score=43.29 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=30.9
Q ss_pred hhCCCCcccEEEECCeeeeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~~~~ 170 (171)
.++|+.|+||++++|+..+.|..+.+.|.+.|+++.
T Consensus 49 ~~~~v~~~Pt~~~~G~~~~~G~~~~~~l~~~l~~~l 84 (85)
T 1nho_A 49 IEYGLMAVPAIAINGVVRFVGAPSREELFEAINDEM 84 (85)
T ss_dssp GGTCSSCSSEEEETTTEEEECSSCCHHHHHHHHHHC
T ss_pred HhCCceeeCEEEECCEEEEccCCCHHHHHHHHHHHh
Confidence 479999999999988755789888999999998765
No 31
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.20 E-value=0.00033 Score=42.72 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=30.1
Q ss_pred hhCCCCcccEEEECCeeeeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~~~ 169 (171)
.++|+.|+||++++|+..+.|..+.+.+.+.|+++
T Consensus 50 ~~~~v~~~Pt~~~~G~~~~~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 50 MEYGIMAVPTIVINGDVEFIGAPTKEALVEAIKKR 84 (85)
T ss_dssp TSTTTCCSSEEEETTEEECCSSSSSHHHHHHHHHH
T ss_pred HHCCCcccCEEEECCEEeeecCCCHHHHHHHHHHh
Confidence 46899999999998886578988899999998875
No 32
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=96.82 E-value=0.00068 Score=40.59 Aligned_cols=32 Identities=16% Similarity=0.388 Sum_probs=26.1
Q ss_pred hhCCCCcccEEEECCeeeeccCC-CHHHHHHHH
Q 030793 135 YSANISGVPHFVLNGKHELSGGQ-PPEVYLRAF 166 (171)
Q Consensus 135 ~~~gv~gvPtfvv~~~~~i~G~~-~~~~~~~~l 166 (171)
.++||.|+||++++|+....|.. +.+.+.+.|
T Consensus 44 ~~~~v~~~Pt~~~~G~~~~~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 44 LEAGLTALPGLAVDGELKIMGRVASKEEIKKIL 76 (77)
T ss_dssp HHHTCSSSSCEEETTEEEECSSCCCHHHHHHHC
T ss_pred HHCCCCcCCEEEECCEEEEcCCCCCHHHHHHHh
Confidence 46899999999999986556887 888887754
No 33
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=96.47 E-value=0.0033 Score=40.63 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=26.9
Q ss_pred hCCCCcccEEEECCeeeeccCCCHHHHHHHHH
Q 030793 136 SANISGVPHFVLNGKHELSGGQPPEVYLRAFQ 167 (171)
Q Consensus 136 ~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~ 167 (171)
++||.|+|||+++|+ .+.|..+.+.|.+.+.
T Consensus 61 ~~~V~~~PT~~i~G~-~~~G~~~~~~l~~~~~ 91 (106)
T 3kp8_A 61 EAGITSYPTWIINGR-TYTGVRSLEALAVASG 91 (106)
T ss_dssp HTTCCSSSEEEETTE-EEESCCCHHHHHHHHT
T ss_pred HcCCeEeCEEEECCE-EecCCCCHHHHHHHhC
Confidence 699999999999988 5889999998887653
No 34
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=96.36 E-value=0.00085 Score=48.54 Aligned_cols=71 Identities=14% Similarity=0.067 Sum_probs=54.3
Q ss_pred CHHHHHHHhhCChHHHHHHHH---HHHHHhcCCccccC--CCC----CCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHh
Q 030793 20 NKKDFYENKFGSQNQGIIARM---TEVFRGLGLEYNMS--GLT----GNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYF 90 (171)
Q Consensus 20 ~~~~~~~~~~g~~~~~~~~~~---~~~a~~~g~~~~~~--~~~----~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~ 90 (171)
...+|+.++|| +|+.+.+.+ .++++.++-.+.+. ++. +.+..+.+++.++..+| +.++++++||++++
T Consensus 116 ~vveFf~~~C~-~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~~~~~~~~~a~a~~aa~~~g--~~~~~~~~lF~ai~ 192 (197)
T 1un2_A 116 QVLEFFSFFCP-HCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALG--VEDKVTVPLFEGVQ 192 (197)
T ss_dssp SEEEEECTTCH-HHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSSSHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHH
T ss_pred EEEEEECCCCh-hHHHhCcccccHHHHHHHCCCCCEEEEeccCcCCccchHHHHHHHHHHHHcC--CHHHhhHHHHHHHH
Confidence 45577777787 899999887 89998876443332 222 24788889988898899 89999999999987
Q ss_pred hcC
Q 030793 91 TQG 93 (171)
Q Consensus 91 ~~g 93 (171)
.+.
T Consensus 193 ~~~ 195 (197)
T 1un2_A 193 KTL 195 (197)
T ss_dssp TTC
T ss_pred HHc
Confidence 654
No 35
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=96.19 E-value=0.0078 Score=39.79 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=29.2
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
...+|.|+||||+ +|+. .+.|+.+.+.|.+.|+++.
T Consensus 70 ~~~~V~g~PT~i~f~~G~ev~Ri~G~~~~~~f~~~L~~~l 109 (116)
T 3dml_A 70 LARPVTFTPTFVLMAGDVESGRLEGYPGEDFFWPMLARLI 109 (116)
T ss_dssp CSSCCCSSSEEEEEETTEEEEEEECCCCHHHHHHHHHHHH
T ss_pred HHCCCCCCCEEEEEECCEEEeeecCCCCHHHHHHHHHHHH
Confidence 3678999999998 5653 4689999999999888754
No 36
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=96.16 E-value=0.011 Score=40.44 Aligned_cols=36 Identities=14% Similarity=0.113 Sum_probs=29.9
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+|||++ ||+. .+.|+.+.+.+.+.|++..
T Consensus 85 ~~ygV~sIPTlilFk~G~~v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 85 DRFGAFRFPATLVFTGGNYRGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp HHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHcCCccCCEEEEEECCEEEEEEecCCCHHHHHHHHHHHh
Confidence 5899999999987 6764 4689999999999888654
No 37
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=96.04 E-value=0.0069 Score=38.28 Aligned_cols=36 Identities=19% Similarity=0.422 Sum_probs=29.3
Q ss_pred hCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHhC
Q 030793 136 SANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAAN 171 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~~ 171 (171)
++||.|+||+++ +|+. .+.|..+.+.+.+.|+++.+
T Consensus 68 ~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 107 (107)
T 1dby_A 68 EYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYLN 107 (107)
T ss_dssp HHTCCSSCEEEEESSSSEEEEEESCCCHHHHHHHHHHHCC
T ss_pred HCCCCcCCEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 579999999988 6653 35799999999999988753
No 38
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=96.00 E-value=0.013 Score=37.07 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=29.7
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 68 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHcCCcccCEEEEEeCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 3689999999998 7763 3578889999999998765
No 39
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=95.91 E-value=0.011 Score=43.90 Aligned_cols=36 Identities=25% Similarity=0.279 Sum_probs=31.1
Q ss_pred hhCCCCcccEEEECCeeeeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++||+....|..+.+.|.+.|.+..
T Consensus 190 ~~~~V~~vPt~~i~G~~~~~G~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 190 DKYGVMSVPSIAINGYLVFVGVPYEEDFLDYVKSAA 225 (243)
T ss_dssp HHTTCCSSSEEEETTEEEEESCCCHHHHHHHHHHHH
T ss_pred HHcCCeeeCeEEECCEEEEeCCCCHHHHHHHHHHHh
Confidence 368999999999999876789999999999888754
No 40
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=95.86 E-value=0.012 Score=37.47 Aligned_cols=36 Identities=14% Similarity=0.344 Sum_probs=29.4
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+|||++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 71 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 110 (112)
T 1t00_A 71 AKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFI 110 (112)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTHHHH
T ss_pred HhCCCCcccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 3689999999988 6763 3579999999999988765
No 41
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=95.80 E-value=0.048 Score=34.33 Aligned_cols=66 Identities=9% Similarity=-0.004 Sum_probs=42.0
Q ss_pred HHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCCCHHHHHHHHHHHh
Q 030793 100 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 100 ~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~~~~ 170 (171)
....++..+.|++-..-.++.. .+..+.+.....|..+||+++|++.-.+.| -+.+++.+.|.++.
T Consensus 18 ~~aK~~L~~~gi~y~~idi~~d----~~~~~~~~~~~~G~~tVP~I~i~Dg~~l~~-~~~~el~~~L~el~ 83 (92)
T 2lqo_A 18 LRLKTALTANRIAYDEVDIEHN----RAAAEFVGSVNGGNRTVPTVKFADGSTLTN-PSADEVKAKLVKIA 83 (92)
T ss_dssp HHHHHHHHHTTCCCEEEETTTC----HHHHHHHHHHSSSSSCSCEEEETTSCEEES-CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCceEEEEcCCC----HHHHHHHHHHcCCCCEeCEEEEeCCEEEeC-CCHHHHHHHHHHhc
Confidence 3466777888987652223221 344444444456899999999965434555 46788888887753
No 42
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=95.59 E-value=0.018 Score=35.99 Aligned_cols=35 Identities=20% Similarity=0.410 Sum_probs=28.6
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. .+.|..+.+.+.+.|+++
T Consensus 66 ~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 66 TQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEEECCCHHHHHHHHHHH
T ss_pred HhCCCCcccEEEEEeCCeEEEEEecCCCHHHHHHHHHhh
Confidence 3689999999998 6763 357889999999998875
No 43
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=95.49 E-value=0.027 Score=34.93 Aligned_cols=36 Identities=17% Similarity=0.290 Sum_probs=29.4
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++|+.++||+++ +|+. .+.|..+.+.+.+.|+++.
T Consensus 63 ~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 102 (104)
T 2e0q_A 63 ARYGVMSLPTVIFFKDGEPVDEIIGAVPREEIEIRIKNLL 102 (104)
T ss_dssp HHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HhCCccccCEEEEEECCeEhhhccCCCCHHHHHHHHHHHh
Confidence 3689999999998 7764 3568889999999988764
No 44
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=95.48 E-value=0.017 Score=39.26 Aligned_cols=35 Identities=11% Similarity=0.113 Sum_probs=28.8
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.++|||++ ||+. .+.|+.+.+.+.+.|++.
T Consensus 83 ~~ygV~siPTlilFkdG~~v~~~vG~~~k~~l~~~l~~~ 121 (137)
T 2qsi_A 83 ARFGVAVCPSLAVVQPERTLGVIAKIQDWSSYLAQIGAM 121 (137)
T ss_dssp HHHTCCSSSEEEEEECCEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHcCCccCCEEEEEECCEEEEEEeCCCCHHHHHHHHHHH
Confidence 4799999999987 6764 467999999888888764
No 45
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=95.48 E-value=0.023 Score=37.55 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=29.9
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 88 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 88 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp GGGTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHcCCCccCEEEEEeCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 3689999999998 7874 3578889999999998865
No 46
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=95.45 E-value=0.019 Score=36.50 Aligned_cols=35 Identities=23% Similarity=0.410 Sum_probs=27.9
Q ss_pred hCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHhC
Q 030793 136 SANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAAN 171 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~~ 171 (171)
++||.|+|||++ +|+. .+.|. +.+.+.+.|++..+
T Consensus 73 ~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 73 AAGITAMPTFHVYKDGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp HHTCCBSSEEEEEETTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred HcCCCcccEEEEEECCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 579999999988 6763 35687 88999999987653
No 47
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=95.44 E-value=0.024 Score=35.63 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=29.1
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHhC
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAAN 171 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~~ 171 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|+++.+
T Consensus 69 ~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 109 (109)
T 3tco_A 69 DKYSVLNIPTTLIFVNGQLVDSLVGAVDEDTLESTVNKYLK 109 (109)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred HhcCcccCCEEEEEcCCcEEEeeeccCCHHHHHHHHHHHhC
Confidence 3689999999876 6763 35788899999999988753
No 48
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=95.39 E-value=0.012 Score=36.96 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=28.7
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 65 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 65 SQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred HHcCCccccEEEEEeCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 3689999999998 7763 3579899999988887654
No 49
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=95.38 E-value=0.029 Score=36.34 Aligned_cols=36 Identities=17% Similarity=0.226 Sum_probs=29.6
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 79 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 79 IEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHcCCCcccEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 3689999999998 7864 3578889999999998765
No 50
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=95.35 E-value=0.023 Score=35.63 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=28.5
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. .+.|..+.+.+.+.|+++
T Consensus 68 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 68 NAYQVRSIPTLMLVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred HhcCCCccCEEEEEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 3689999999998 7863 256888999999988764
No 51
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=95.34 E-value=0.031 Score=35.49 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=29.4
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.++||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 73 ~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 112 (115)
T 1thx_A 73 KKYKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTHL 112 (115)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHcCCCceeEEEEEcCCEEEEEecCCCCHHHHHHHHHHHh
Confidence 3689999999998 7763 3568889999999998764
No 52
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=95.27 E-value=0.028 Score=36.70 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=29.4
Q ss_pred hhCCCCcccEEEE---CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL---NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv---~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|++..
T Consensus 76 ~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 76 YKYDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLG 116 (126)
T ss_dssp HHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHC
T ss_pred HHcCCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 3689999999988 6763 3579899999999998764
No 53
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=95.13 E-value=0.038 Score=34.90 Aligned_cols=36 Identities=14% Similarity=0.303 Sum_probs=29.3
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 70 ~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 70 QRFSLKGVPQILYFKDGEYKGKMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp HHTTCCSSCEEEEEETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred HhcCCCcCCEEEEEECCEEEEEEeccCCHHHHHHHHHHHh
Confidence 3689999999988 7764 3579889999999988764
No 54
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=95.11 E-value=0.033 Score=35.72 Aligned_cols=33 Identities=27% Similarity=0.489 Sum_probs=25.6
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQV 168 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~ 168 (171)
.++||.|+|||++ +|+. .+.|+ +.+.|.+.|++
T Consensus 67 ~~~~V~~~PT~~~~~~G~~v~~~~G~-~~~~l~~~i~k 103 (105)
T 3zzx_A 67 QDNQIACMPTFLFMKNGQKLDSLSGA-NYDKLLELVEK 103 (105)
T ss_dssp HHTTCCBSSEEEEEETTEEEEEEESC-CHHHHHHHHHH
T ss_pred HHcCCCeecEEEEEECCEEEEEEeCc-CHHHHHHHHHh
Confidence 3699999999987 5652 35685 78889888876
No 55
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=95.11 E-value=0.022 Score=36.47 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=28.1
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+|||++ +|+. .+.|. +.+.|.+.|+++.
T Consensus 73 ~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 73 EKENITSMPTFKVYKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred HHcCCCcccEEEEEECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 3689999999998 6763 35688 8999999988764
No 56
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=95.09 E-value=0.017 Score=38.04 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=29.1
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|++..
T Consensus 83 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 83 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp GGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 4789999999998 7764 3679999999999887653
No 57
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=95.05 E-value=0.024 Score=36.26 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=28.3
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|++.
T Consensus 66 ~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 66 KELGFERVPTLVFIRDGKVAKVFSGIMNPRELQALYASI 104 (110)
T ss_dssp HHTTCCSSCEEEEEESSSEEEEEESCCCHHHHHHHHHTC
T ss_pred HHcCCcccCEEEEEECCEEEEEEcCCCCHHHHHHHHHHH
Confidence 3689999999998 7864 346989999999988753
No 58
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=94.98 E-value=0.056 Score=33.29 Aligned_cols=30 Identities=20% Similarity=0.150 Sum_probs=24.3
Q ss_pred hCCCCcccEEEECCeeeeccCCCHHHHHHHHH
Q 030793 136 SANISGVPHFVLNGKHELSGGQPPEVYLRAFQ 167 (171)
Q Consensus 136 ~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~ 167 (171)
..|+.++|+++++|+ .+.|. +.+.+.+.|+
T Consensus 62 ~~g~~~vP~l~~~g~-~i~G~-~~~~l~~~l~ 91 (92)
T 3ic4_A 62 ISGSYSVPVVVKGDK-HVLGY-NEEKLKELIR 91 (92)
T ss_dssp HHSSSCSCEEEETTE-EEESC-CHHHHHHHHH
T ss_pred hcCCCCcCEEEECCE-EEeCC-CHHHHHHHhc
Confidence 578899999999997 46675 7888888775
No 59
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=94.93 E-value=0.032 Score=36.24 Aligned_cols=35 Identities=29% Similarity=0.428 Sum_probs=27.6
Q ss_pred hCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHhC
Q 030793 136 SANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAAN 171 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~~ 171 (171)
++||.|+|||++ +|+. .+.|.. .+.+.+.|+++.+
T Consensus 86 ~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~i~~~~~ 124 (124)
T 1faa_A 86 ELGIRVVPTFKILKENSVVGEVTGAK-YDKLLEAIQAARS 124 (124)
T ss_dssp HHCCSSSSEEEEEETTEEEEEEESSC-HHHHHHHHHHHTC
T ss_pred HcCCCeeeEEEEEeCCcEEEEEcCCC-HHHHHHHHHHhhC
Confidence 589999999988 6764 246875 8899999988753
No 60
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=94.92 E-value=0.03 Score=35.03 Aligned_cols=35 Identities=17% Similarity=0.376 Sum_probs=28.1
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. .+.|..+.+.+.+.|+++
T Consensus 67 ~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 67 AKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp HHTTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHTT
T ss_pred HhCCCcccCEEEEEeCCeEEEEEeCCCCHHHHHHHHHHh
Confidence 3689999999987 6763 357988999999988764
No 61
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=94.91 E-value=0.032 Score=35.69 Aligned_cols=35 Identities=14% Similarity=0.256 Sum_probs=28.6
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|++.
T Consensus 65 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 103 (112)
T 2voc_A 65 GKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKH 103 (112)
T ss_dssp HHTTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHTT
T ss_pred HHcCCCcccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 3689999999998 7874 357999999999988754
No 62
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=94.91 E-value=0.041 Score=36.08 Aligned_cols=35 Identities=17% Similarity=0.306 Sum_probs=27.6
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+|||++ +|+. .+.|. +.+.+.+.|++..
T Consensus 85 ~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 123 (124)
T 1xfl_A 85 SDWAIQAMPTFMFLKEGKILDKVVGA-KKDELQSTIAKHL 123 (124)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESC-CHHHHHHHHHHHC
T ss_pred HHcCCCccCEEEEEECCEEEEEEeCC-CHHHHHHHHHHhc
Confidence 3689999999998 7763 34674 7889999988765
No 63
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=94.82 E-value=0.032 Score=34.98 Aligned_cols=35 Identities=23% Similarity=0.459 Sum_probs=28.4
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++|+.|+||+++ +|+. ...|..+.+.|.+.|+++
T Consensus 66 ~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 66 MRYRVMSIPTVILFKDGQPVEVLVGAQPKRNYQAKIEKH 104 (109)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHTT
T ss_pred HhCCCCcCCEEEEEeCCcEeeeEeCCCCHHHHHHHHHHH
Confidence 3689999999998 7763 357888999999988764
No 64
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=94.81 E-value=0.049 Score=35.14 Aligned_cols=35 Identities=17% Similarity=0.319 Sum_probs=28.0
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+|||++ +|+. .+.|.. .+.|.+.|++..
T Consensus 81 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~l 119 (122)
T 2vlu_A 81 EQFSVEAMPTFLFMKEGDVKDRVVGAI-KEELTAKVGLHA 119 (122)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred HHcCCCcccEEEEEeCCEEEEEEeCcC-HHHHHHHHHHHh
Confidence 3689999999998 6763 357888 889999988764
No 65
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=94.81 E-value=0.035 Score=36.09 Aligned_cols=35 Identities=26% Similarity=0.493 Sum_probs=28.1
Q ss_pred hCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHhC
Q 030793 136 SANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAAN 171 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~~ 171 (171)
++||.|+|||++ +|+. .+.|. +.+.|.+.|+++.+
T Consensus 83 ~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l~ 121 (121)
T 2j23_A 83 EVGIRAMPTFVFFKNGQKIDTVVGA-DPSKLQAAITQHSA 121 (121)
T ss_dssp HHTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHHTC
T ss_pred HcCCCcccEEEEEECCeEEeeEcCC-CHHHHHHHHHHhhC
Confidence 578999999988 6763 35787 89999999988753
No 66
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=94.80 E-value=0.05 Score=36.21 Aligned_cols=36 Identities=22% Similarity=0.334 Sum_probs=29.3
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 98 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l 137 (140)
T 1v98_A 98 ARYGVRSVPTLVLFRRGAPVATWVGASPRRVLEERLRPYL 137 (140)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHCCCCccCEEEEEeCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 3689999999988 7763 3579889999999988764
No 67
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=94.80 E-value=0.093 Score=30.65 Aligned_cols=58 Identities=14% Similarity=0.143 Sum_probs=34.6
Q ss_pred HHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCCCHHHHHHHHH
Q 030793 102 LVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPEVYLRAFQ 167 (171)
Q Consensus 102 L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~ 167 (171)
+..+.++.|++-..-.++.. ....+.+ ...|+.++|+++++|+ .+.|. +.+.+.+.|+
T Consensus 17 ~~~~l~~~~i~~~~~di~~~----~~~~~~~--~~~~~~~vP~l~~~g~-~~~g~-~~~~l~~~l~ 74 (75)
T 1r7h_A 17 TKKALDRAGLAYNTVDISLD----DEARDYV--MALGYVQAPVVEVDGE-HWSGF-RPERIKQLQA 74 (75)
T ss_dssp HHHHHHHTTCCCEEEETTTC----HHHHHHH--HHTTCBCCCEEEETTE-EEESC-CHHHHHHHHC
T ss_pred HHHHHHHcCCCcEEEECCCC----HHHHHHH--HHcCCCccCEEEECCe-EEcCC-CHHHHHHHHh
Confidence 44555666776541112221 2233333 3589999999999987 46665 5677777664
No 68
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=94.79 E-value=0.027 Score=40.86 Aligned_cols=35 Identities=26% Similarity=0.458 Sum_probs=29.2
Q ss_pred hhCCCCcccEEEECCeee-eccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVLNGKHE-LSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv~~~~~-i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||++++|+.. +.|..+.+.|.+.|++.
T Consensus 183 ~~~~v~~~Pt~~~~G~~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 183 EQFQVVGVPKIVINKGVAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp HHTTCCSSSEEEEGGGTEEEESCCCHHHHHHHHHHH
T ss_pred HHcCCcccCEEEECCEEEEeeCCCCHHHHHHHHHHH
Confidence 469999999999988743 67999999898888764
No 69
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=94.77 E-value=0.021 Score=36.49 Aligned_cols=35 Identities=17% Similarity=0.380 Sum_probs=27.9
Q ss_pred hCCCCcccEEEE--CCe----eeeccCCCHHHHHHHHHHHh
Q 030793 136 SANISGVPHFVL--NGK----HELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~----~~i~G~~~~~~~~~~l~~~~ 170 (171)
++||.|+||+++ +|+ ..+.|..+.+.|.+.|++..
T Consensus 76 ~~~v~~~Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 76 QYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp HHTCCSSSEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred HCCCCcccEEEEEeCCCcCCcccccCccCHHHHHHHHHhcc
Confidence 579999999988 675 34568888999999887653
No 70
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=94.77 E-value=0.051 Score=37.24 Aligned_cols=36 Identities=22% Similarity=0.472 Sum_probs=29.5
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.++||+++ +|+. .+.|..+.+.|.+.|++..
T Consensus 112 ~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 151 (155)
T 2ppt_A 112 GRHRIQGIPAFILFHKGRELARAAGARPASELVGFVRGKL 151 (155)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHcCCCcCCEEEEEeCCeEEEEecCCCCHHHHHHHHHHHh
Confidence 3689999999988 6763 3679999999999988764
No 71
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=94.74 E-value=0.046 Score=37.11 Aligned_cols=36 Identities=25% Similarity=0.307 Sum_probs=28.1
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|++..
T Consensus 85 ~~~~V~~iPT~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l 124 (142)
T 2es7_A 85 DRFNVRRFPATLVFTDGKLRGALSGIHPWAELLTLMRSIV 124 (142)
T ss_dssp HTTTCCSSSEEEEESCC----CEESCCCHHHHHHHHHHHH
T ss_pred HhcCCCcCCeEEEEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 4799999999987 5653 3579999999999888754
No 72
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=94.74 E-value=0.027 Score=35.53 Aligned_cols=35 Identities=26% Similarity=0.167 Sum_probs=24.7
Q ss_pred hCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 136 SANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
++||.|+||+++ +|+. .+.|..+.+.|.+.|++..
T Consensus 66 ~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 66 RYAVFTGPTVLLFYNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp ----CCCCEEEEEETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred hcCCCCCCEEEEEeCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 589999999987 6763 2479999999999988653
No 73
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=94.73 E-value=0.038 Score=35.09 Aligned_cols=35 Identities=29% Similarity=0.428 Sum_probs=27.0
Q ss_pred hCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHhC
Q 030793 136 SANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAAN 171 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~~ 171 (171)
++||.|+|||++ +|+. .+.|.. .+.+.+.|+++.+
T Consensus 73 ~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~~~ 111 (111)
T 2pu9_C 73 ELGIRVVPTFKILKENSVVGEVTGAK-YDKLLEAIQAARS 111 (111)
T ss_dssp HHCCSBSSEEEEESSSSEEEEEESSC-HHHHHHHHHHHHC
T ss_pred HcCCCeeeEEEEEeCCcEEEEEcCCC-HHHHHHHHHHhhC
Confidence 579999999988 5653 356874 8899999988753
No 74
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=94.67 E-value=0.037 Score=37.03 Aligned_cols=35 Identities=23% Similarity=0.402 Sum_probs=28.5
Q ss_pred hCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 136 SANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
++||.|+|||++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 73 ~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 111 (140)
T 3hz4_A 73 KYGVQGTPTFKFFCHGRPVWEQVGQIYPSILKNAVRDML 111 (140)
T ss_dssp HHTCCEESEEEEEETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred HCCCCcCCEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 589999999998 7764 3578889999998887653
No 75
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=94.55 E-value=0.058 Score=33.94 Aligned_cols=35 Identities=29% Similarity=0.442 Sum_probs=28.4
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.++||+++ +|+. ...|..+.+.|.+.|++.
T Consensus 72 ~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 72 SKYSVRGYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred HhcCCCcccEEEEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 3689999999988 6763 457888999999988764
No 76
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=94.48 E-value=0.052 Score=35.02 Aligned_cols=34 Identities=21% Similarity=0.396 Sum_probs=27.1
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+|||++ +|+. .+.|. +.+.|.+.|+++
T Consensus 78 ~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 78 SECEVKSMPTFQFFKKGQKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp HHTTCCSSSEEEEESSSSEEEEEESC-CHHHHHHHHHHH
T ss_pred HHcCCccccEEEEEeCCeEEEEEcCC-CHHHHHHHHHHh
Confidence 3689999999988 5653 35688 899999998875
No 77
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=94.45 E-value=0.064 Score=34.99 Aligned_cols=36 Identities=14% Similarity=0.353 Sum_probs=28.5
Q ss_pred hhCCCCcccEEEE---CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL---NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv---~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|++..
T Consensus 80 ~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~ 120 (130)
T 2kuc_A 80 KKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGV 120 (130)
T ss_dssp HHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHH
Confidence 3689999999987 4553 3569889999999998764
No 78
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=94.43 E-value=0.062 Score=34.19 Aligned_cols=34 Identities=26% Similarity=0.521 Sum_probs=26.3
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. .+.|. +.+.+.+.|++.
T Consensus 71 ~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 71 QKNEVSAMPTLLLFKNGKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred HHcCCCccCEEEEEECCEEEEEEeCC-CHHHHHHHHHhh
Confidence 3689999999988 6763 34687 668899988875
No 79
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=94.39 E-value=0.066 Score=33.35 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=27.2
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. .+.|. +.+.+.+.|++.
T Consensus 67 ~~~~v~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 67 SESEVKSMPTFQFFKKGQKVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp HHTTCCBSSEEEEEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred HHcCCCcCcEEEEEECCeEEEEEeCC-CHHHHHHHHHHh
Confidence 3689999999998 6763 35688 899999988875
No 80
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=94.22 E-value=0.079 Score=35.03 Aligned_cols=36 Identities=17% Similarity=0.378 Sum_probs=28.9
Q ss_pred hhCCCCcccEEEE--CCee-eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH-ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~-~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|++..
T Consensus 85 ~~~~v~~~Pt~~~~~~G~~~~~~g~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 85 SKFDVSGYPTIKILKKGQAVDYDGSRTQEEIVAKVREVS 123 (140)
T ss_dssp HHTTCCSSSEEEEEETTEEEECCSCCCHHHHHHHHHHHH
T ss_pred HHCCCCccCeEEEEECCcEEEcCCCCCHHHHHHHHHHhc
Confidence 3689999999988 7762 2468889999999988764
No 81
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=94.17 E-value=0.066 Score=33.35 Aligned_cols=34 Identities=29% Similarity=0.489 Sum_probs=26.1
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++|+.|+||+++ +|+. ...| .+.+.+.+.|+++
T Consensus 68 ~~~~v~~~Pt~~~~~~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 68 MEYNISSMPTFVFLKNGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEES-CCHHHHHHHHHHT
T ss_pred HHcCCCcccEEEEEcCCcEEEEEcC-CCHHHHHHHHHHh
Confidence 3689999999988 6763 3467 5788888888764
No 82
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=94.16 E-value=0.026 Score=36.35 Aligned_cols=35 Identities=17% Similarity=0.434 Sum_probs=27.6
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+|||++ +|+. .+.|..+.+.|.+.|+++
T Consensus 78 ~~~~i~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 78 RNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTCSC
T ss_pred HhcCCCcCCEEEEEECCEEEEEecCCCCHHHHHHHHHHH
Confidence 3689999999998 6763 357888999888877653
No 83
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=94.11 E-value=0.062 Score=35.32 Aligned_cols=35 Identities=17% Similarity=0.407 Sum_probs=27.2
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+|||++ +|+. .+.| .+.+.|.+.|+++.
T Consensus 84 ~~~~v~~~Pt~~i~~~G~~~~~~~G-~~~~~l~~~l~~~l 122 (125)
T 1r26_A 84 SKCRVLQLPTFIIARSGKMLGHVIG-ANPGMLRQKLRDII 122 (125)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHHH
T ss_pred HHcCCCcccEEEEEeCCeEEEEEeC-CCHHHHHHHHHHHh
Confidence 3689999999998 7763 3467 57788999888764
No 84
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=94.11 E-value=0.063 Score=35.64 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=27.1
Q ss_pred hhCCCCcccEEEE----CCe--e--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL----NGK--H--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv----~~~--~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+ . .+.|. +.+.|.+.|+++.
T Consensus 86 ~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l 128 (133)
T 3cxg_A 86 DQHNIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYC 128 (133)
T ss_dssp HHTTCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHS
T ss_pred HhcCCCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHH
Confidence 3689999999976 776 2 35677 7889999888753
No 85
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=94.01 E-value=0.12 Score=34.27 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=29.2
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+|||++ +|+. .+.|..+.+.+.+.++++.
T Consensus 86 ~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~ 125 (135)
T 3emx_A 86 NKAGVEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIY 125 (135)
T ss_dssp HHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred HHcCCceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 5799999999988 4652 4579999999999888764
No 86
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=94.00 E-value=0.1 Score=33.17 Aligned_cols=35 Identities=14% Similarity=0.321 Sum_probs=26.7
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++|+.|+|||++ +|+. .+.| .+.+.+.+.|++..
T Consensus 75 ~~~~v~~~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~ 113 (118)
T 2vm1_A 75 EAYNVEAMPTFLFIKDGEKVDSVVG-GRKDDIHTKIVALM 113 (118)
T ss_dssp HHTTCCSBSEEEEEETTEEEEEEES-CCHHHHHHHHHHHH
T ss_pred HHcCCCcCcEEEEEeCCeEEEEecC-CCHHHHHHHHHHHh
Confidence 3689999999988 7763 3467 47888888887754
No 87
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=93.99 E-value=0.086 Score=32.67 Aligned_cols=34 Identities=21% Similarity=0.395 Sum_probs=26.3
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++|+.++||+++ +|+. ...| .+.+.|.+.|+++
T Consensus 66 ~~~~v~~~Pt~~~~~~g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 66 AKYSVTAMPTFVFIKDGKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred HHcCCccccEEEEEeCCcEEEEEeC-CCHHHHHHHHHhh
Confidence 3689999999998 6763 3467 4788899888875
No 88
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=93.92 E-value=0.048 Score=41.79 Aligned_cols=31 Identities=26% Similarity=0.433 Sum_probs=27.3
Q ss_pred hhCCCCcccEEEECCeeeeccCCCHHHHHHHH
Q 030793 135 YSANISGVPHFVLNGKHELSGGQPPEVYLRAF 166 (171)
Q Consensus 135 ~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l 166 (171)
.+.||.|+||+++||+ .+.|.++.+++.+.+
T Consensus 245 ~~~gI~~vPT~~i~G~-~~~G~~~~~~L~~~l 275 (291)
T 3kp9_A 245 TEAGITSYPTWIINGR-TYTGVRSLEALAVAS 275 (291)
T ss_dssp HTTTCCSTTEEEETTE-EEESCCCHHHHHHHT
T ss_pred HHcCCcccCeEEECCE-EecCCCCHHHHHHHH
Confidence 4799999999999998 589999999888765
No 89
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=93.91 E-value=0.086 Score=34.22 Aligned_cols=63 Identities=16% Similarity=0.230 Sum_probs=41.0
Q ss_pred CHHHHHHHHHHcCC-chhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE---CCeee-eccCCCHHHHHHHHHHHh
Q 030793 98 DKEFLVECARKVGV-EGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL---NGKHE-LSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 98 ~~~~L~~ia~~~Gl-d~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv---~~~~~-i~G~~~~~~~~~~l~~~~ 170 (171)
+.+.+.+++++.|+ +.. .+.+.. ..+. ..+|+.|+|++++ +|+.. ..|..+.+.+.+.|+++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~--~~~d~~---~~~~-----~~~~i~~~P~~~~id~~g~i~~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 67 QVPAMQEFVNKYPVKTFT--QLADTD---GSVW-----ANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp CHHHHHHHHHHTTCTTSE--EEECTT---CHHH-----HHTTCCSSSEEEEECTTCCEEEEESCCCHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHcCCCceE--EEEcCC---cHHH-----HHcCCCCCceEEEECCCCCEEEEecCCCHHHHHHHHHHHh
Confidence 35667777777777 322 222211 1121 2589999999977 56642 578889999999998765
No 90
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=93.89 E-value=0.049 Score=41.31 Aligned_cols=106 Identities=10% Similarity=0.123 Sum_probs=56.7
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHhcCCccccCCC-CCCcHHHHHHHHHHHhcCcch----HHHHHHHHHHHHhhcCCCCC
Q 030793 23 DFYENKFGSQNQGIIARMTEVFRGLGLEYNMSGL-TGNTLDSHRLLYLAGQQGLDK----QHNLAEELFLGYFTQGKYIG 97 (171)
Q Consensus 23 ~~~~~~~g~~~~~~~~~~~~~a~~~g~~~~~~~~-~~~s~~a~r~~~~a~~~g~~~----~~~~~~~l~~a~~~~g~~i~ 97 (171)
.|.+.+|+ -|+.+.+.+..+.+...+.+-+.++ .++|....+.+.++.... + -.+---++++.+|.....
T Consensus 153 vFtDp~CP-YCkkl~~~l~~~l~~~~Vr~i~~Pilg~~S~~~a~~I~ca~d~~--ka~~~~~~~kia~L~~~~~~~~~-- 227 (273)
T 3tdg_A 153 IVSDPMCP-HCQKELTKLRDHLKENTVRMVVVGWLGVNSAKKAALIQEEMAKA--RARGASVEDKISILEKIYSTQYD-- 227 (273)
T ss_dssp EEECTTCH-HHHHHHHTHHHHHHHCEEEEEECCCSSHHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHSTTCC--
T ss_pred EEECcCCh-hHHHHHHHHHHHhhCCcEEEEEeeccCccHHHHHHHHhcCCCcc--ccccCChHHHHHHHHHHhcccCC--
Confidence 45566676 6888888888666654443333333 456777777666664322 1 112223455555542111
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHH-hhCC-CCcccEEEECCe
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKK-YSAN-ISGVPHFVLNGK 150 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~-~~~g-v~gvPtfvv~~~ 150 (171)
++. . ..+ ...++.+++..+. .+.| |.||||++..+.
T Consensus 228 -------------~p~--~-~~~-~d~~~~v~~~~~~~~~~G~i~gtP~ii~~~~ 265 (273)
T 3tdg_A 228 -------------INA--Q-KEP-EDLRTKVENTTKKIFESGVIKGVPFLYHYKA 265 (273)
T ss_dssp -------------GGG--S-CCC-HHHHHHHHHHHHHHHSSSSSCSSSEEEEC--
T ss_pred -------------CCC--C-CCc-hHHHHHHHHHHHHHHHcCCcccCcEEEecCc
Confidence 111 0 111 1122355565555 6899 999999999653
No 91
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=93.89 E-value=0.098 Score=35.11 Aligned_cols=36 Identities=25% Similarity=0.376 Sum_probs=28.8
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|++..
T Consensus 103 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 142 (148)
T 3p2a_A 103 TRFRIRSIPTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQL 142 (148)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred HHCCCCccCEEEEEECCeEEEEEeCCCCHHHHHHHHHHHh
Confidence 3689999999987 6753 3578899999999888753
No 92
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=93.86 E-value=0.09 Score=33.66 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=26.1
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+|||++ +|+. .+.| .+.+.+.+.|++.
T Consensus 79 ~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 79 RKYNISAMPTFIAIKNGEKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred HHcCCCccceEEEEeCCcEEEEEeC-CCHHHHHHHHHHh
Confidence 3689999999998 6763 2467 4778888888765
No 93
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=93.83 E-value=0.075 Score=34.19 Aligned_cols=33 Identities=21% Similarity=0.545 Sum_probs=25.7
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQV 168 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~ 168 (171)
.++||.|+||+++ +|+. .+.|.. .+.|.+.|++
T Consensus 77 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 77 KECEVTAMPTFVLGKDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp HHTTCCSBSEEEEEETTEEEEEEESSC-HHHHHHHHHT
T ss_pred HHCCCCcccEEEEEeCCeEEEEEeCCC-HHHHHHHHHh
Confidence 3689999999988 6764 257887 8888888764
No 94
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=93.77 E-value=0.076 Score=37.00 Aligned_cols=36 Identities=6% Similarity=0.079 Sum_probs=28.0
Q ss_pred hhCCCCcccEEEE--CCee-----------eeccCCC-HHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH-----------ELSGGQP-PEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~-----------~i~G~~~-~~~~~~~l~~~~ 170 (171)
.++||.++|||++ +|+. ++.|+.+ .++|.+.|++..
T Consensus 89 ~~y~V~siPT~~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 89 TMYELYDPVSVMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp TTTTCCSSEEEEEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 3799999999953 6765 4679887 888888887653
No 95
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=93.67 E-value=0.076 Score=38.23 Aligned_cols=36 Identities=31% Similarity=0.560 Sum_probs=29.1
Q ss_pred hhCCCCcccEEEE--CCe--eeeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGK--HELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~--~~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+ ..+.|..+.+.|.+.|++..
T Consensus 186 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 186 DQYNVMAVPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HhCCCcccCeEEEEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 4689999999988 343 34679999999999998765
No 96
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=93.62 E-value=0.068 Score=35.00 Aligned_cols=34 Identities=9% Similarity=0.105 Sum_probs=27.0
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQV 168 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~ 168 (171)
.++||.|+||+++ +|+. ...|..+.+.+.+.|++
T Consensus 90 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 90 RKFSVKSLPTIILLKNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHTT
T ss_pred HHcCCCCcCEEEEEECCEEEEEecCCCCHHHHHHHHHh
Confidence 3689999999988 6763 34688899999888754
No 97
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=93.57 E-value=0.065 Score=33.93 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=26.6
Q ss_pred hhCCCCcccEEEECCeeeeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVLNGKHELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~~~ 169 (171)
.++| .++|+++++|+....|..+.+.+.+.|++.
T Consensus 61 ~~~g-~~vP~l~~~g~~~~~~g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 61 ERYK-FDIPVFHLNGQFLMMHRVNTSKLEKQLRKL 94 (100)
T ss_dssp HHSS-SSCSEEEESSSEEEESSCCHHHHHHHHHSS
T ss_pred HHHC-CCCCEEEECCEEEEecCCCHHHHHHHHHHH
Confidence 3688 999999999985435667888898888754
No 98
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=93.53 E-value=0.1 Score=34.51 Aligned_cols=36 Identities=14% Similarity=0.137 Sum_probs=28.3
Q ss_pred hhCCCCcccEEEE---CCee-eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL---NGKH-ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv---~~~~-~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. ...|..+.+.|.+.|+++.
T Consensus 99 ~~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~~l~~~l~~~l 138 (141)
T 3hxs_A 99 RDFGIQSIPTIWFVPMKGEPQVNMGALSKEQLKGYIDKVL 138 (141)
T ss_dssp HHTTCCSSSEEEEECSSSCCEEEESCCCHHHHHHHHHHTT
T ss_pred HHcCCCCcCEEEEEeCCCCEEEEeCCCCHHHHHHHHHHHH
Confidence 3689999999987 3442 3578889999999998764
No 99
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=93.50 E-value=0.081 Score=35.00 Aligned_cols=35 Identities=17% Similarity=0.381 Sum_probs=28.1
Q ss_pred hhCCCCcccEEEE---CCee----eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL---NGKH----ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv---~~~~----~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|+++
T Consensus 85 ~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 85 KHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp HHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred HHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 4699999999976 3553 357999999999998865
No 100
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=93.34 E-value=0.14 Score=32.28 Aligned_cols=35 Identities=34% Similarity=0.584 Sum_probs=25.2
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|.. .+.|.+.|+++.
T Consensus 70 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~~ 108 (112)
T 3d6i_A 70 ELFEISAVPYFIIIHKGTILKELSGAD-PKEYVSLLEDCK 108 (112)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEECSCC-HHHHHHHHHHHH
T ss_pred HHcCCCcccEEEEEECCEEEEEecCCC-HHHHHHHHHHHH
Confidence 3689999999988 6763 246764 456888877653
No 101
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=93.15 E-value=0.15 Score=34.66 Aligned_cols=36 Identities=22% Similarity=0.464 Sum_probs=28.0
Q ss_pred hhCCCCcccEEEE---CCee--eeccCC--CHHHHHHHHHHHhC
Q 030793 135 YSANISGVPHFVL---NGKH--ELSGGQ--PPEVYLRAFQVAAN 171 (171)
Q Consensus 135 ~~~gv~gvPtfvv---~~~~--~i~G~~--~~~~~~~~l~~~~~ 171 (171)
..+||.|+||+++ +|+. .+ |.. +.+.|.+.|+++.+
T Consensus 110 ~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 110 AQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp HHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred HHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 5799999999987 3542 34 888 88999999987653
No 102
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=93.07 E-value=0.39 Score=31.00 Aligned_cols=32 Identities=9% Similarity=0.075 Sum_probs=26.6
Q ss_pred hhCCCCcccEEEECCeeeeccCC-CHHHHHHHH
Q 030793 135 YSANISGVPHFVLNGKHELSGGQ-PPEVYLRAF 166 (171)
Q Consensus 135 ~~~gv~gvPtfvv~~~~~i~G~~-~~~~~~~~l 166 (171)
.+.|+.++|.++|||+....|.. +.++|.+.+
T Consensus 69 ~~~G~~~LP~~~VDGevv~~G~yPt~eEl~~~l 101 (106)
T 3ktb_A 69 QKHGADALPITLVDGEIAVSQTYPTTKQMSEWT 101 (106)
T ss_dssp HTTCGGGCSEEEETTEEEECSSCCCHHHHHHHH
T ss_pred HHcCcccCCEEEECCEEEEeccCCCHHHHHHHh
Confidence 47999999999999998888865 577887654
No 103
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.96 E-value=0.11 Score=33.73 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=27.8
Q ss_pred hhCCCCcccEEEE--CCee-eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH-ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~-~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|++.
T Consensus 71 ~~~~v~~~Pt~~~~~~G~~~~~~G~~~~~~l~~~l~~~ 108 (126)
T 1x5e_A 71 GRFIINALPTIYHCKDGEFRRYQGPRTKKDFINFISDK 108 (126)
T ss_dssp HHTTCCSSSEEEEEETTEEEECCSCCCHHHHHHHHHTC
T ss_pred HHcCCcccCEEEEEeCCeEEEeecCCCHHHHHHHHHHH
Confidence 3689999999988 6763 346888999999988754
No 104
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=92.90 E-value=0.16 Score=33.57 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=26.5
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+|||++ +|+. .+.|. +.+.|.+.|+++.
T Consensus 93 ~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 131 (139)
T 3d22_A 93 ASWEIKATPTFFFLRDGQQVDKLVGA-NKPELHKKITAIL 131 (139)
T ss_dssp HHTTCCEESEEEEEETTEEEEEEESC-CHHHHHHHHHHHH
T ss_pred HHcCCCcccEEEEEcCCeEEEEEeCC-CHHHHHHHHHHHh
Confidence 3689999999987 5653 34677 7888988887653
No 105
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=92.62 E-value=0.056 Score=34.18 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=25.8
Q ss_pred hCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 136 SANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
++|+.|+||+++ +|+. .+.| .+.+.|.+.|++..
T Consensus 74 ~~~v~~~Pt~~~~~~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 74 EWNVEAMPTFIFLKDGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp HHHCSSTTEEEEEETTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred hCCCCcccEEEEEeCCEEEEEEec-CCHHHHHHHHHHhh
Confidence 578999999998 6763 3467 47788888888764
No 106
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=92.53 E-value=0.2 Score=33.09 Aligned_cols=36 Identities=19% Similarity=0.353 Sum_probs=28.3
Q ss_pred hhCCCCcccEEEE---CCee-eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL---NGKH-ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv---~~~~-~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. ...|..+.+.|.+.|++..
T Consensus 86 ~~~~v~~~Pt~~~~~~~G~~~~~~G~~~~~~l~~~l~~~~ 125 (136)
T 2l5l_A 86 GAFGIRSIPSILFIPMEGKPEMAQGAMPKASFKKAIDEFL 125 (136)
T ss_dssp HHTTCCSSCEEEEECSSSCCEEEESCCCHHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCCcEEEEeCCCCHHHHHHHHHHHh
Confidence 3689999999986 4553 3478889999999998764
No 107
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=92.41 E-value=0.16 Score=34.40 Aligned_cols=36 Identities=25% Similarity=0.399 Sum_probs=27.6
Q ss_pred hhCCCCcccEEEE--CCee-----------eecc-CCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH-----------ELSG-GQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~-----------~i~G-~~~~~~~~~~l~~~~ 170 (171)
.+++|.|+||+++ +|+. .+.| ..+.+.|.+.|+.+.
T Consensus 71 ~~~~v~~~Pt~~~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 71 QYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred HHcCCCccCeEEEEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 3689999999987 4653 3568 788899998888753
No 108
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=92.39 E-value=0.18 Score=33.18 Aligned_cols=63 Identities=14% Similarity=0.190 Sum_probs=42.3
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE---CCee--eeccCCCHHHHHHHHHHHh
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL---NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv---~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
+.+.+.+++++.|++.. .+.+.. ..+. ..+||.|+|++++ +|+. ...|..+.+.+.+.|+++.
T Consensus 77 ~~~~~~~~~~~~~~~~~--~~~d~~---~~~~-----~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 144 (148)
T 2b5x_A 77 DPGKIKETAAEHDITQP--IFVDSD---HALT-----DAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVL 144 (148)
T ss_dssp SHHHHHHHHHHTTCCSC--EEECSS---CHHH-----HHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCcc--eEECCc---hhHH-----HHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHH
Confidence 57778888888888643 222211 1121 3589999999987 4553 3458788889999888765
No 109
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=91.49 E-value=0.025 Score=37.08 Aligned_cols=36 Identities=25% Similarity=0.569 Sum_probs=27.3
Q ss_pred hhCCCCcccEEEE---C-Cee----eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL---N-GKH----ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv---~-~~~----~i~G~~~~~~~~~~l~~~~ 170 (171)
..+||.|+||+++ . |+. .+.|..+.+.|.+.|+++.
T Consensus 72 ~~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~ 115 (130)
T 2lst_A 72 RRYRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVC 115 (130)
Confidence 4689999999987 3 553 2578888888888887653
No 110
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=92.26 E-value=0.088 Score=33.83 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=25.5
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQ 167 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~ 167 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|+
T Consensus 81 ~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 81 SRYGIPTVPGFVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp HHHTCCSSCEEEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred HHcCCCCCCeEEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 4689999999976 5653 3578889888887764
No 111
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=92.22 E-value=0.22 Score=31.48 Aligned_cols=53 Identities=17% Similarity=0.303 Sum_probs=30.2
Q ss_pred HHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCCC
Q 030793 101 FLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQP 158 (171)
Q Consensus 101 ~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~~ 158 (171)
....+..+.|++-..-.++.. ....+.+.....|..++|+++++|+ .|.|..+
T Consensus 31 ~ak~~L~~~~i~y~~idI~~~----~~~~~~l~~~~~g~~~vP~ifi~g~-~igG~d~ 83 (99)
T 3qmx_A 31 RALALLKRKGVEFQEYCIDGD----NEAREAMAARANGKRSLPQIFIDDQ-HIGGCDD 83 (99)
T ss_dssp HHHHHHHHHTCCCEEEECTTC----HHHHHHHHHHTTTCCCSCEEEETTE-EEESHHH
T ss_pred HHHHHHHHCCCCCEEEEcCCC----HHHHHHHHHHhCCCCCCCEEEECCE-EEeChHH
Confidence 345566667776542122221 2344444332238999999999998 4666443
No 112
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=92.17 E-value=0.23 Score=32.05 Aligned_cols=56 Identities=20% Similarity=-0.003 Sum_probs=34.0
Q ss_pred HHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEE--EECCeeeeccCCCHHHHHHHH
Q 030793 101 FLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHF--VLNGKHELSGGQPPEVYLRAF 166 (171)
Q Consensus 101 ~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtf--vv~~~~~i~G~~~~~~~~~~l 166 (171)
.|.+++++.|++-..-.++. + .++ ..++|+. +|++ +++|+....|..+.+.+.+.|
T Consensus 49 ~L~~l~~e~~i~~~~vDId~-d---~~l-----~~~ygv~-VP~l~~~~dG~~v~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 49 SLRVLQKKSWFELEVINIDG-N---EHL-----TRLYNDR-VPVLFAVNEDKELCHYFLDSDVIGAYL 106 (107)
T ss_dssp HHHHHHHHSCCCCEEEETTT-C---HHH-----HHHSTTS-CSEEEETTTTEEEECSSCCCHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEECCC-C---HHH-----HHHhCCC-CceEEEEECCEEEEecCCCHHHHHHHh
Confidence 45556666776644111221 1 222 1257887 9999 668885546888888887765
No 113
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=92.16 E-value=0.068 Score=33.15 Aligned_cols=32 Identities=16% Similarity=0.091 Sum_probs=25.6
Q ss_pred hCCCCcccEEE-ECCeeeeccCCCHHHHHHHHHHH
Q 030793 136 SANISGVPHFV-LNGKHELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 136 ~~gv~gvPtfv-v~~~~~i~G~~~~~~~~~~l~~~ 169 (171)
++|+. +|+++ ++|+. +.|..+.+.+.+.|++.
T Consensus 43 ~~g~~-vPtl~~~~G~~-v~g~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 43 AYGLR-VPVLRDPMGRE-LDWPFDAPRLRAWLDAA 75 (87)
T ss_dssp HHTTT-CSEEECTTCCE-EESCCCHHHHHHHHHTC
T ss_pred HhCCC-cCeEEEECCEE-EeCCCCHHHHHHHHHHH
Confidence 46888 99999 78874 55888999999888753
No 114
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.05 E-value=0.19 Score=32.62 Aligned_cols=35 Identities=17% Similarity=0.294 Sum_probs=27.1
Q ss_pred hCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 136 SANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
++||.|+||+++ +|+. .+.|..+.+.|.+.|.+..
T Consensus 78 ~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 78 RYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLF 116 (133)
T ss_dssp HHTCCSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHHH
T ss_pred hCCCCeeCeEEEEeCCCceEEecCCCCHHHHHHHHHHHh
Confidence 578999999987 5652 3568888999988887653
No 115
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=92.02 E-value=0.24 Score=33.45 Aligned_cols=35 Identities=29% Similarity=0.408 Sum_probs=26.4
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|. +.+.+.+.|++..
T Consensus 79 ~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~i~~~l 117 (153)
T 2wz9_A 79 EKYEISSVPTFLFFKNSQKIDRLDGA-HAPELTKKVQRHA 117 (153)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHHS
T ss_pred HHcCCCCCCEEEEEECCEEEEEEeCC-CHHHHHHHHHHHh
Confidence 3689999999988 7763 24575 6778888887754
No 116
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=91.90 E-value=0.2 Score=32.46 Aligned_cols=63 Identities=14% Similarity=0.196 Sum_probs=40.8
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE---CCeee-ec---cCCCHHHHHHHHHHHh
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL---NGKHE-LS---GGQPPEVYLRAFQVAA 170 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv---~~~~~-i~---G~~~~~~~~~~l~~~~ 170 (171)
+.+.+.+++++.|++.. .+.+.. ..+. ..+|+.++|++++ +|+.. .. |..+.+.+.+.|+++.
T Consensus 66 ~~~~~~~~~~~~~~~~~--~~~d~~---~~~~-----~~~~i~~~P~~~lid~~G~i~~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 66 DVGAMQSFVSKYNLNFT--NLNDAD---GVIW-----ARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp CHHHHHHHHHHHTCCSE--EEECTT---SHHH-----HHTTCCSSSEEEEECTTSCEEEECCSSSCCCHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHcCCCce--EEECCc---hhHH-----HhcCCCCCCEEEEECCCCcEEEEEcCCCccCHHHHHHHHHHHh
Confidence 36667777777777543 222211 1221 2589999999876 45532 56 8889999999998764
No 117
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=91.85 E-value=0.41 Score=31.08 Aligned_cols=32 Identities=22% Similarity=0.421 Sum_probs=26.5
Q ss_pred hhCCCCcccEEEECCeeeeccCC-CHHHHHHHH
Q 030793 135 YSANISGVPHFVLNGKHELSGGQ-PPEVYLRAF 166 (171)
Q Consensus 135 ~~~gv~gvPtfvv~~~~~i~G~~-~~~~~~~~l 166 (171)
.+.|+.++|.++|||+....|.. +.++|.+.+
T Consensus 66 ~~~G~~~LP~~~VDGevv~~G~yPt~eEl~~~l 98 (110)
T 3kgk_A 66 EASGAEGLPLLLLDGETVMAGRYPKRAELARWF 98 (110)
T ss_dssp HHHCGGGCCEEEETTEEEEESSCCCHHHHHHHH
T ss_pred HHcCcccCCEEEECCEEEEeccCCCHHHHHHHh
Confidence 46899999999999998888865 578887765
No 118
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=91.07 E-value=0.031 Score=34.77 Aligned_cols=35 Identities=29% Similarity=0.472 Sum_probs=26.8
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++|+.++||+++ +|+. ...|..+.+.+.+.|+++
T Consensus 67 ~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 67 AQYGIRSIPTLLLFKNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 4689999999988 6653 246877888888887764
No 119
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=91.72 E-value=0.25 Score=35.71 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=29.4
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|+++.
T Consensus 78 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 78 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp GGGTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred HHcCCCcCCEEEEEECCeEEEEeccccChHHHHHHHHhhc
Confidence 3689999999998 6763 3579999999999998764
No 120
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=91.69 E-value=0.94 Score=30.32 Aligned_cols=67 Identities=13% Similarity=0.231 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHH-hhCCCCcccEEE-E--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKK-YSANISGVPHFV-L--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~-~~~gv~gvPtfv-v--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
+.+.+.+++++.|++.. .+.+. ..+...+.. ...|+.++|+++ + +|+. ...|..+.+.+.+.|+++.
T Consensus 78 ~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 150 (165)
T 3or5_A 78 QLPNVKNYMKTQGIIYP--VMMAT----PELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMAL 150 (165)
T ss_dssp CHHHHHHHHHHHTCCSC--EEECC----HHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCc--eEecC----HHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 46677778888888653 23331 234444432 344899999965 4 3542 3468889999999998765
No 121
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=91.57 E-value=0.24 Score=30.99 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=24.9
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+ +.|.+.|++..
T Consensus 68 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~-~~l~~~l~~~l 106 (107)
T 1gh2_A 68 ATNNISATPTFQFFRNKVRIDQYQGADA-VGLEEKIKQHL 106 (107)
T ss_dssp HHTTCCSSSEEEEEETTEEEEEEESSCH-HHHHHHHHHHH
T ss_pred HhcCCCcccEEEEEECCeEEEEEeCCCH-HHHHHHHHHhc
Confidence 3689999999987 5653 3467654 55888887653
No 122
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=91.52 E-value=0.28 Score=31.85 Aligned_cols=35 Identities=17% Similarity=0.092 Sum_probs=27.2
Q ss_pred hhCCCCcccEEEE--CCe----eeeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGK----HELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~----~~i~G~~~~~~~~~~l~~~ 169 (171)
.+++|.|+||+++ +|+ +...|..+.+.|.+.|++.
T Consensus 86 ~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 86 ERMRVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp HHTTCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred HhcCCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 3689999999976 332 3457989999999988764
No 123
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=91.35 E-value=0.28 Score=29.31 Aligned_cols=29 Identities=14% Similarity=0.295 Sum_probs=20.6
Q ss_pred hCC--CCcccEEEECCeeeeccCCCHHHHHHHHHH
Q 030793 136 SAN--ISGVPHFVLNGKHELSGGQPPEVYLRAFQV 168 (171)
Q Consensus 136 ~~g--v~gvPtfvv~~~~~i~G~~~~~~~~~~l~~ 168 (171)
..| +.++|+++++|+ .+.|. +.+.+.+++
T Consensus 51 ~~~~~~~~vP~i~~~g~-~i~~~---~~l~~~~~~ 81 (85)
T 1ego_A 51 KAGKPVETVPQIFVDQQ-HIGGY---TDFAAWVKE 81 (85)
T ss_dssp HTCCCSCCSCEEEETTE-EEESS---HHHHHHHHH
T ss_pred HhCCCCceeCeEEECCE-EEECH---HHHHHHHHH
Confidence 355 999999999998 46554 556665554
No 124
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=91.19 E-value=0.16 Score=34.95 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=27.1
Q ss_pred hhCCCCcccEEEE---CCee--eeccCCC-HHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL---NGKH--ELSGGQP-PEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv---~~~~--~i~G~~~-~~~~~~~l~~~~ 170 (171)
..+||.|+||+++ +|+. ...|..+ .+.|.+.|+++.
T Consensus 124 ~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 124 VKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp HHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred HHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 5799999999875 3542 3469888 888888887653
No 125
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=91.09 E-value=0.19 Score=32.58 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=25.8
Q ss_pred hCCCCcccEEEE--CCe---eeeccCCCHHHHHHHHHHH
Q 030793 136 SANISGVPHFVL--NGK---HELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~---~~i~G~~~~~~~~~~l~~~ 169 (171)
++||.++||+++ +|+ ..+.|..+.+.|.+.|.+.
T Consensus 84 ~~~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 84 QYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSA 122 (130)
T ss_dssp HHTCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHH
Confidence 578999999987 232 2457888998888877764
No 126
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=90.98 E-value=0.38 Score=31.95 Aligned_cols=63 Identities=16% Similarity=0.219 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEE-EE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHF-VL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtf-vv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
+.+.+.+++++.|++.. .+.+.. ..+ ...+||.|+|++ ++ +|+. ...|..+.+.+.+.|+++.
T Consensus 70 ~~~~~~~~~~~~~~~~~--~~~d~~---~~~-----~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll 137 (151)
T 2f9s_A 70 SKIAVHNFMKSYGVNFP--VVLDTD---RQV-----LDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIK 137 (151)
T ss_dssp CHHHHHHHHHHHTCCSC--EEEETT---SHH-----HHHTTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHcCCCce--EEECCc---hHH-----HHhcCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 45667777777777643 222211 112 135899999995 45 3542 3458889999999998764
No 127
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=90.96 E-value=0.23 Score=33.14 Aligned_cols=64 Identities=19% Similarity=0.202 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCccc-EEEEC--Cee--eeccCCCHHHHHHHHHHHh
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVP-HFVLN--GKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvP-tfvv~--~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
+.+.+.+++.+.|++... .+.+.. ..+. ..+|+.++| +|+++ |+. ...|..+.+.+.+.|+++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~-~~~d~~---~~~~-----~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 83 AADNARRFLGRYGNPFGR-VGVDAN---GRAS-----IEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp CHHHHHHHHHHHCCCCSE-EEEETT---SHHH-----HHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHcCCCCce-eeeCch---hHHH-----HhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 566778888888876431 111211 1121 358999999 67774 543 3568888888888777653
No 128
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=90.89 E-value=0.22 Score=33.82 Aligned_cols=112 Identities=8% Similarity=-0.014 Sum_probs=67.3
Q ss_pred HhhCChHHHHHHHHHHHHHhcCCccccCCCCCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCCCCCCHHHHHHHH
Q 030793 27 NKFGSQNQGIIARMTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECA 106 (171)
Q Consensus 27 ~~~g~~~~~~~~~~~~~a~~~g~~~~~~~~~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~~i~~~~~L~~ia 106 (171)
.+|+ .|..+.+.+.++.+.++ .+.+-.+..++..+... .....+ ......+.+.+.+++
T Consensus 47 ~~C~-~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~---~~~~~~----------------~~~~~~~~~~~~~~~ 105 (165)
T 3ha9_A 47 AWCP-SCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKA---LGLNKP----------------GYPPPDTPEMFRKFI 105 (165)
T ss_dssp TTCT-THHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHH---HTCCST----------------TSCCCCCHHHHHHHH
T ss_pred CCCc-chhhhHHHHHHHHHHcC-CcEEEEEEecccccccc---cccccc----------------cCCCCCCHHHHHHHH
Confidence 3454 68889999999998886 44443332333222111 111110 112235788899999
Q ss_pred HHcCC-chhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE---CCeeeeccCC-CHHHHHHHHHHHh
Q 030793 107 RKVGV-EGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL---NGKHELSGGQ-PPEVYLRAFQVAA 170 (171)
Q Consensus 107 ~~~Gl-d~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv---~~~~~i~G~~-~~~~~~~~l~~~~ 170 (171)
++.|+ +.. .+.+. ..+. ..+||.++|++++ +|+....|.. +.+.+.+.|+++.
T Consensus 106 ~~~~~~~~~--~~~d~----~~~~-----~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 106 ANYGDPSWI--MVMDD----GSLV-----EKFNVRSIDYIVIMDKSSNVLYAGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp HHHSCTTSE--EEECC----SHHH-----HHTTCCSSSEEEEEETTCCEEEEEESCCHHHHHHHHHHC-
T ss_pred HHcCCCCee--EEeCh----HHHH-----HHhCCCCceEEEEEcCCCcEEEeCCCCCHHHHHHHHHHHh
Confidence 99998 432 12111 1222 3579999999987 4664446888 8999999998764
No 129
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=90.86 E-value=0.42 Score=31.95 Aligned_cols=69 Identities=12% Similarity=0.042 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE-C--Cee--eeccCCCHHHHHHHHHHHh
Q 030793 97 GDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL-N--GKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 97 ~~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv-~--~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.+.+.+.+++++.|++.. .+.+.. ....+. .....+|+.|+|++++ + |+. ...|..+.+.+.+.|+++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~--~~~d~~-~~~~~~--~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 151 (158)
T 3eyt_A 78 MTPISLKAFLHEYRIKFP--VGVDQP-GDGAMP--RTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLL 151 (158)
T ss_dssp SCHHHHHHHHHHTTCCSC--EEEECC-CSSSSC--HHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCce--EEEcCc-cchhhH--HHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHh
Confidence 356777777788887643 121211 100000 0113589999996654 3 553 3468889999999998865
No 130
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=90.80 E-value=0.053 Score=32.44 Aligned_cols=30 Identities=17% Similarity=0.252 Sum_probs=22.4
Q ss_pred hCCCCcccEEEECCeeeeccCCCHHHHHHHHH
Q 030793 136 SANISGVPHFVLNGKHELSGGQPPEVYLRAFQ 167 (171)
Q Consensus 136 ~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~ 167 (171)
+.|+.++|+++++|+ .+.|. +.+.+.+.|+
T Consensus 45 ~~g~~~vP~~~~~g~-~~~g~-~~~~l~~~l~ 74 (81)
T 1h75_A 45 AQGFRQLPVVIAGDL-SWSGF-RPDMINRLHP 74 (81)
T ss_dssp HTTCCSSCEEEETTE-EEESC-CHHHHGGGSC
T ss_pred HhCCCccCEEEECCE-EEecC-CHHHHHHHHh
Confidence 589999999999997 46564 5666666554
No 131
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=90.79 E-value=0.42 Score=32.02 Aligned_cols=71 Identities=14% Similarity=0.068 Sum_probs=42.7
Q ss_pred CCHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE-C--Cee--eeccCCCHHHHHHHHHHHhC
Q 030793 97 GDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL-N--GKH--ELSGGQPPEVYLRAFQVAAN 171 (171)
Q Consensus 97 ~~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv-~--~~~--~i~G~~~~~~~~~~l~~~~~ 171 (171)
.+.+.+.+++++.|++.. .+.+.......+.. ....+||.|+|++++ + |+. ...|..+.+.+.+.|+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~--~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 80 MTPEALKVFIDEFGIKFP--VAVDMPREGQRIPS--TMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp SCHHHHHHHHHHTTCCSC--EEEECCCTTCSSCH--HHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCCCc--EEECCccccchhhh--HHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 367778888888888753 11111111001100 113589999997655 3 542 34688899999999988753
No 132
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=90.75 E-value=0.24 Score=33.35 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=27.1
Q ss_pred hCCCCcccEEEE---CCee--eeccCCCHHHHHHHHHHHh
Q 030793 136 SANISGVPHFVL---NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 136 ~~gv~gvPtfvv---~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.+||.++||+++ +|+. .+.|..+.+.+.+.|+++.
T Consensus 116 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 116 NLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp HTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred HcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 589999999976 3543 3468889999999988654
No 133
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=90.73 E-value=0.3 Score=31.39 Aligned_cols=63 Identities=13% Similarity=0.163 Sum_probs=38.9
Q ss_pred CCHHHHHHHHHHcCC-chhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE---CCee--eeccCCCHHHHHHHHHHH
Q 030793 97 GDKEFLVECARKVGV-EGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL---NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 97 ~~~~~L~~ia~~~Gl-d~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv---~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.+.+.+.+..++.|+ +.. .+.+.. ..+. ..+|+.|+|++++ +|+. ...|..+.+.+.+.|+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~--~~~d~~---~~~~-----~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 69 QSEADFKNWYKGLDYKNLP--VLVDPS---GKLL-----ETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp CCHHHHHHHHTTCCCTTCC--EEECTT---CHHH-----HHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred hhHHHHHHHHhhcCCCCee--EEECcc---hHHH-----HHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 345666666666666 221 222211 1111 3589999999876 3542 347888999999998875
No 134
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=90.55 E-value=0.21 Score=33.22 Aligned_cols=64 Identities=16% Similarity=0.134 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE---CCee--eeccCCCHHHHHHHHHHHh
Q 030793 97 GDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL---NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 97 ~~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv---~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.+.+.+.+++++.|++.. .+.+.. ..+. ..+||.++|++++ +|+. ...|..+.+.+.+.|+++.
T Consensus 72 ~~~~~~~~~~~~~~~~~~--~~~d~~---~~~~-----~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 140 (153)
T 2l5o_A 72 DPIESVRQYVKDYGLPFT--VMYDAD---KAVG-----QAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAW 140 (153)
T ss_dssp SCHHHHHHHHHHTTCCSE--EEECSS---CHHH-----HHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCce--EEcCch---HHHH-----HHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 456778888888888753 222211 1221 2578999999876 4553 3568889999999888764
No 135
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=90.21 E-value=0.27 Score=33.70 Aligned_cols=22 Identities=18% Similarity=0.295 Sum_probs=15.7
Q ss_pred hhCCCCcccEEEE---CCee--eeccC
Q 030793 135 YSANISGVPHFVL---NGKH--ELSGG 156 (171)
Q Consensus 135 ~~~gv~gvPtfvv---~~~~--~i~G~ 156 (171)
...++.|+|||++ +|+. .+.|+
T Consensus 94 ~~~~v~~~PT~~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 94 LSPDGQYVPRIMFVDPSLTVRADIAGR 120 (151)
T ss_dssp GCTTCCCSSEEEEECTTSCBCTTCCCS
T ss_pred hhcCCCCCCEEEEECCCCCEEEEEeCC
Confidence 3678999999987 3542 34687
No 136
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=90.11 E-value=0.33 Score=30.93 Aligned_cols=33 Identities=27% Similarity=0.423 Sum_probs=25.7
Q ss_pred CCCcccEEEE--CC-e---eeeccCCCHHHHHHHHHHHh
Q 030793 138 NISGVPHFVL--NG-K---HELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 138 gv~gvPtfvv--~~-~---~~i~G~~~~~~~~~~l~~~~ 170 (171)
+|.|+||+++ +| + ..+.|..+.+.|.+.|++..
T Consensus 78 ~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 78 EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENG 116 (121)
T ss_dssp CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTS
T ss_pred ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhcc
Confidence 9999999987 33 3 24578889999999988754
No 137
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=90.08 E-value=0.42 Score=34.09 Aligned_cols=36 Identities=11% Similarity=0.222 Sum_probs=28.3
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. .+.|..+.+.|.+.|++..
T Consensus 162 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l 201 (210)
T 3apq_A 162 RMKGVNSYPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHV 201 (210)
T ss_dssp HHTTCCSSSEEEEECTTSCCEECCSCCCHHHHHHHHHHHH
T ss_pred HHcCCCcCCeEEEEECCCceeEecCCCCHHHHHHHHHHhC
Confidence 4689999999987 5652 3578889999999887653
No 138
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=89.86 E-value=0.39 Score=32.18 Aligned_cols=35 Identities=6% Similarity=0.069 Sum_probs=24.6
Q ss_pred hhCCCCcccEEEE--CCee-----------eeccCCC-HHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH-----------ELSGGQP-PEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~-----------~i~G~~~-~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. .+.|..+ .++|.+.|+++
T Consensus 71 ~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 71 KMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp TSSCSCSSCEEEEEETTEEEEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEEECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 3689999999976 4542 2446554 78888887765
No 139
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=89.84 E-value=0.27 Score=29.11 Aligned_cols=50 Identities=20% Similarity=0.232 Sum_probs=27.8
Q ss_pred HHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccC
Q 030793 101 FLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGG 156 (171)
Q Consensus 101 ~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~ 156 (171)
.+..+..+.|++-..-.++. + .....++.. ..|+.++|+++++|+ .+.|.
T Consensus 16 ~~~~~l~~~~i~~~~~~i~~-~---~~~~~~~~~-~~~~~~vP~l~~~g~-~i~g~ 65 (82)
T 1fov_A 16 RAKALLSSKGVSFQELPIDG-N---AAKREEMIK-RSGRTTVPQIFIDAQ-HIGGY 65 (82)
T ss_dssp HHHHHHHHHTCCCEEEECTT-C---SHHHHHHHH-HHSSCCSCEEEETTE-EEESH
T ss_pred HHHHHHHHCCCCcEEEECCC-C---HHHHHHHHH-HhCCCCcCEEEECCE-EEeCH
Confidence 34455566677654111222 1 123333322 468999999999998 46554
No 140
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=89.63 E-value=0.14 Score=30.65 Aligned_cols=27 Identities=19% Similarity=0.183 Sum_probs=19.2
Q ss_pred hCCCCcccEEEECCeeeeccCC-CHHHH
Q 030793 136 SANISGVPHFVLNGKHELSGGQ-PPEVY 162 (171)
Q Consensus 136 ~~gv~gvPtfvv~~~~~i~G~~-~~~~~ 162 (171)
++|+.++||++++|+....|.. +.++|
T Consensus 50 ~~gv~~vPt~~i~g~~~~~G~~~~~~~l 77 (80)
T 2k8s_A 50 KAGVKSVPALVIDGAAFHINFGAGIDDL 77 (80)
T ss_dssp HHTCCEEEEEEETTEEEEEEEEEEHHHH
T ss_pred HcCCCcCCEEEECCEEEEeccCcCHHHh
Confidence 5799999999999984445543 34444
No 141
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.23 E-value=0.38 Score=39.47 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=28.7
Q ss_pred hhCCCCcccEEEECCeeeeccCCCHHHHHHHHHH
Q 030793 135 YSANISGVPHFVLNGKHELSGGQPPEVYLRAFQV 168 (171)
Q Consensus 135 ~~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~~ 168 (171)
.++||.++||+++||+....|..+.+.+.+.++.
T Consensus 164 ~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 164 TERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDT 197 (521)
T ss_dssp HHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCC
T ss_pred HHhCCCccCEEEECCEEEecCCCCHHHHHHHHhh
Confidence 4689999999999998766799999988887653
No 142
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=89.22 E-value=0.49 Score=31.45 Aligned_cols=67 Identities=22% Similarity=0.294 Sum_probs=42.3
Q ss_pred CCHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccE-EEEC--Ce--eeeccCCCHHHHHHHHHHHh
Q 030793 97 GDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPH-FVLN--GK--HELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 97 ~~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPt-fvv~--~~--~~i~G~~~~~~~~~~l~~~~ 170 (171)
.+.+.+.+++++.|++.. .+.+....... ....+|+.++|+ |+|+ |+ +...|..+.+.+.+.|++..
T Consensus 72 ~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~-----~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~ 143 (154)
T 3ia1_A 72 DTREVVLEYMKTYPRFIP--LLASDRDRPHE-----VAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAG 143 (154)
T ss_dssp CCHHHHHHHHTTCTTEEE--CBCCSSCCHHH-----HHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHcCCCcc--cccccccchHH-----HHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhcc
Confidence 456777778777777543 22221001111 123689999999 5563 54 23578889999999998754
No 143
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=89.16 E-value=0.53 Score=28.23 Aligned_cols=27 Identities=19% Similarity=0.257 Sum_probs=18.0
Q ss_pred CCCcccEEEECCeeeeccCCCHHHHHHHHHH
Q 030793 138 NISGVPHFVLNGKHELSGGQPPEVYLRAFQV 168 (171)
Q Consensus 138 gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~~ 168 (171)
++.++|+++++|+ .+.|. +.+.+.+++
T Consensus 58 ~~~~vP~i~i~g~-~i~g~---~~i~~~~~~ 84 (89)
T 3msz_A 58 PISTVPQIFIDDE-HIGGF---TELKANADK 84 (89)
T ss_dssp CCCSSCEEEETTE-EEESH---HHHHHTHHH
T ss_pred CCCccCEEEECCE-EEeCh---HHHHHHHHH
Confidence 3399999999998 46554 444444443
No 144
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=89.09 E-value=0.3 Score=30.75 Aligned_cols=29 Identities=14% Similarity=0.190 Sum_probs=22.1
Q ss_pred hCCCCcccEEEECC-eeeeccCCCHHHHHHHH
Q 030793 136 SANISGVPHFVLNG-KHELSGGQPPEVYLRAF 166 (171)
Q Consensus 136 ~~gv~gvPtfvv~~-~~~i~G~~~~~~~~~~l 166 (171)
..|..++|+++++| + .+.| .+.+.+.++|
T Consensus 72 ~~g~~~vP~l~i~~~~-~igg-~~~~~l~~~L 101 (103)
T 3nzn_A 72 FNPSVSFPTTIINDEK-AIVG-FKEKEIRESL 101 (103)
T ss_dssp HCTTCCSCEEEETTTE-EEES-CCHHHHHHHT
T ss_pred hCCCCccCEEEECCCE-EEEc-CCHHHHHHHh
Confidence 36999999999998 6 3544 5777777765
No 145
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=89.04 E-value=0.36 Score=32.03 Aligned_cols=63 Identities=17% Similarity=0.206 Sum_probs=38.9
Q ss_pred HHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE---CCee--eeccCCCHHHHHHHHHHHh
Q 030793 99 KEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL---NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 99 ~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv---~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.+.+.+++++.|++.- ..+.+.. ..+. ..+|+.++|++++ +|+. ...|..+.+.+.+.|+++.
T Consensus 75 ~~~~~~~~~~~~~~~~-~~~~d~~---~~~~-----~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~ 142 (152)
T 2lja_A 75 KKAWENMVTKDQLKGI-QLHMGTD---RTFM-----DAYLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELL 142 (152)
T ss_dssp HHHHHHHHHHHTCCSE-EEECSSC---THHH-----HHTTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCc-eeecCcc---hhHH-----HHcCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHh
Confidence 4566777777777642 1222211 1122 2589999999876 3542 2357778889999988764
No 146
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=88.92 E-value=0.57 Score=34.91 Aligned_cols=35 Identities=23% Similarity=0.399 Sum_probs=27.3
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. .+.|..+.+.+.+.|...
T Consensus 74 ~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~ 112 (287)
T 3qou_A 74 AQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDXV 112 (287)
T ss_dssp HTTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHcCCCCCCeEEEEECCEEEEEeeCCCCHHHHHHHHHHH
Confidence 4799999999987 6763 257888888888887654
No 147
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=88.71 E-value=0.12 Score=33.00 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=21.8
Q ss_pred hCCCCcccEEEECCeeeeccCC------CHHHHHHHHHHH
Q 030793 136 SANISGVPHFVLNGKHELSGGQ------PPEVYLRAFQVA 169 (171)
Q Consensus 136 ~~gv~gvPtfvv~~~~~i~G~~------~~~~~~~~l~~~ 169 (171)
.+|+.++||++++|+. +.|.. +.+.|.+.|+++
T Consensus 68 ~~~v~~~Pt~~~~g~~-v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 68 WTGRGTVPNVFIGGKQ-IGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp HHSCCSSCEEEETTEE-EECHHHHHHHHHTTCHHHHHHHT
T ss_pred HhCCCCcCEEEECCEE-ECChHHHHHHHhCChHHHHHHHc
Confidence 5799999999999974 43322 333566666543
No 148
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=88.34 E-value=0.56 Score=29.58 Aligned_cols=54 Identities=22% Similarity=0.280 Sum_probs=30.5
Q ss_pred HHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCCCH
Q 030793 100 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPP 159 (171)
Q Consensus 100 ~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~~~ 159 (171)
..+..+..+.|++-..-.++. + ..+.+.+.. ..|+.++|+++++|++ +.|..+.
T Consensus 36 ~~~~~~L~~~~i~~~~vdi~~-~---~~~~~~l~~-~~g~~~vP~v~i~g~~-igg~d~~ 89 (105)
T 2yan_A 36 KQILEILNSTGVEYETFDILE-D---EEVRQGLKA-YSNWPTYPQLYVKGEL-VGGLDIV 89 (105)
T ss_dssp HHHHHHHHHHTCCCEEEEGGG-C---HHHHHHHHH-HHTCCSSCEEEETTEE-EECHHHH
T ss_pred HHHHHHHHHCCCCeEEEECCC-C---HHHHHHHHH-HHCCCCCCeEEECCEE-EeChHHH
Confidence 345556666677644111211 1 234433332 3588999999999984 6665433
No 149
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=88.21 E-value=0.75 Score=30.55 Aligned_cols=67 Identities=9% Similarity=0.080 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCC--CCcccEEE-E--CCe--eeeccCCCHHHHHHHHHHH
Q 030793 97 GDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSAN--ISGVPHFV-L--NGK--HELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 97 ~~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~g--v~gvPtfv-v--~~~--~~i~G~~~~~~~~~~l~~~ 169 (171)
.+.+.+.+++++.|++... .... ......+ ...+| +.++|+++ + +|+ +...|..+.+.+.+.|+++
T Consensus 66 d~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~-----~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 138 (151)
T 3raz_A 66 DTSDNIGNFLKQTPVSYPI-WRYT-GANSRNF-----MKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLA 138 (151)
T ss_dssp SCHHHHHHHHHHSCCSSCE-EEEC-CSCHHHH-----HHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHcCCCCce-EecC-ccchHHH-----HHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4566777788888876531 1122 1111111 12467 99999655 5 354 2457888999999999887
Q ss_pred h
Q 030793 170 A 170 (171)
Q Consensus 170 ~ 170 (171)
.
T Consensus 139 ~ 139 (151)
T 3raz_A 139 H 139 (151)
T ss_dssp H
T ss_pred H
Confidence 5
No 150
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=87.95 E-value=0.13 Score=33.33 Aligned_cols=34 Identities=15% Similarity=0.365 Sum_probs=24.6
Q ss_pred hCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHHh
Q 030793 136 SANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
++||.++|||++ +|+. .+.| .+.+.+.+.|+++.
T Consensus 84 ~~~v~~~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 84 KYNVEAMPTFLFIKDGAEADKVVG-ARKDDLQNTIVKHV 121 (130)
T ss_dssp HHTCCSSCCCCBCTTTTCCBCCCT-TCTTTHHHHHHHHT
T ss_pred HcCCCccceEEEEeCCeEEEEEeC-CCHHHHHHHHHHHH
Confidence 579999999998 5652 2456 36677888877654
No 151
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=87.83 E-value=0.29 Score=31.84 Aligned_cols=22 Identities=32% Similarity=0.607 Sum_probs=17.2
Q ss_pred hCCCCcccEEEECCeeeeccCCC
Q 030793 136 SANISGVPHFVLNGKHELSGGQP 158 (171)
Q Consensus 136 ~~gv~gvPtfvv~~~~~i~G~~~ 158 (171)
..|+.++|+++++|++ +.|..+
T Consensus 77 ~~g~~tvP~vfi~g~~-igG~d~ 98 (118)
T 3c1r_A 77 INGQRTVPNIYINGKH-IGGNDD 98 (118)
T ss_dssp HHSCCSSCEEEETTEE-EESHHH
T ss_pred HhCCCCcCEEEECCEE-EEcHHH
Confidence 4688999999999984 666543
No 152
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=87.63 E-value=0.84 Score=30.07 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=25.2
Q ss_pred hCCCCcccEEEE--CCee--eeccCC-------CHHHHHHHHHHH
Q 030793 136 SANISGVPHFVL--NGKH--ELSGGQ-------PPEVYLRAFQVA 169 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~~--~i~G~~-------~~~~~~~~l~~~ 169 (171)
+++|.++|||++ +|+. .+.|.. +.+.+++.|.+.
T Consensus 75 ~~~i~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 75 HYHDNCLPTIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp SCCSSCCSEEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 699999999987 4542 346765 678888888764
No 153
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=87.41 E-value=0.58 Score=30.64 Aligned_cols=64 Identities=11% Similarity=0.062 Sum_probs=39.9
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE-C--CeeeeccCCCHHHHHHHHHHHh
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL-N--GKHELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv-~--~~~~i~G~~~~~~~~~~l~~~~ 170 (171)
+.+.+.+++++.|++.. .+.+.. ..+. ....+||.++|++++ + |+ .+.+..+.+.+.+.|++..
T Consensus 74 ~~~~~~~~~~~~~~~~~--~~~d~~---~~~~---~~~~~~v~~~P~~~lid~~G~-i~~~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 74 NREEWATKAVYMPQGWI--VGWNKA---GDIR---TRQLYDIRATPTIYLLDGRKR-VILKDTSMEQLIDYLATQA 140 (142)
T ss_dssp CHHHHHHHHTTSCTTCE--EEECTT---CHHH---HTTCSCCCSSSEEEEECTTCB-EEECSCCHHHHHHHHHC--
T ss_pred CHHHHHHHHHHcCCCcc--eeeCCc---cchh---hHHHcCCCCCCeEEEECCCCC-EEecCCCHHHHHHHHHHHc
Confidence 56677788888787643 222211 1111 124689999998765 3 55 4567778999999887653
No 154
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=87.40 E-value=1.1 Score=33.83 Aligned_cols=34 Identities=21% Similarity=0.366 Sum_probs=26.9
Q ss_pred hhCCCCcc--cEEEECCeeeeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGV--PHFVLNGKHELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gv--Ptfvv~~~~~i~G~~~~~~~~~~l~~~ 169 (171)
...|..+| |.++|||+..+.|. +.+.+.++|.++
T Consensus 106 ~~~G~~tVyTPqI~Ing~~~v~G~-d~~~l~~~l~~~ 141 (270)
T 2axo_A 106 RALGRNGVYTPQAILNGRDHVKGA-DVRGIYDRLDAF 141 (270)
T ss_dssp HHTTCSCCCSSEEEETTTEEEETT-CHHHHHHHHHHH
T ss_pred HHhCCCcccCCEEEECCEEeecCC-CHHHHHHHHHHh
Confidence 46799888 99999998556675 578888888754
No 155
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=87.39 E-value=2.8 Score=29.09 Aligned_cols=71 Identities=17% Similarity=0.168 Sum_probs=43.5
Q ss_pred CHHHHHHHH-HHcCCchhHhhhc---CCCCChHHHHHHHHHhhCCCCccc-------EEEEC--Cee--eeccCCCHHHH
Q 030793 98 DKEFLVECA-RKVGVEGAAEFLD---DPNSGLNEVHEELKKYSANISGVP-------HFVLN--GKH--ELSGGQPPEVY 162 (171)
Q Consensus 98 ~~~~L~~ia-~~~Gld~~~~~~~---~~~~~~~~v~~~~~~~~~gv~gvP-------tfvv~--~~~--~i~G~~~~~~~ 162 (171)
+.+.+.+++ ++.|++-. .+. ........+...+.....|+.|+| +|+|+ |+. ...|..+.+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~p--~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l 176 (190)
T 2vup_A 99 NEEEIKEFVCTKFKAEFP--IMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDI 176 (190)
T ss_dssp CHHHHHHHHHHHHCCCSC--BBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHH
T ss_pred CHHHHHHHHHHhcCCCeE--EEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHH
Confidence 677888888 78888643 221 111111112222223357999999 77885 542 34577888999
Q ss_pred HHHHHHHh
Q 030793 163 LRAFQVAA 170 (171)
Q Consensus 163 ~~~l~~~~ 170 (171)
.+.|+++.
T Consensus 177 ~~~i~~ll 184 (190)
T 2vup_A 177 EKKLIPLL 184 (190)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888764
No 156
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=86.88 E-value=0.58 Score=29.81 Aligned_cols=36 Identities=11% Similarity=0.064 Sum_probs=25.6
Q ss_pred hhCCCCcccEEEEC--Ce--eeeccC----CCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVLN--GK--HELSGG----QPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv~--~~--~~i~G~----~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++- |+ ..+.|. .+.+.|.+.|+++.
T Consensus 69 ~~~~v~~~Pt~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l 112 (122)
T 3aps_A 69 QKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKL 112 (122)
T ss_dssp HHTTCCSSSEEEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHH
T ss_pred HHcCCCccceEEEEeCCCccceeeccccCcCCHHHHHHHHHHHH
Confidence 36899999999873 22 124454 78889988887653
No 157
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=86.86 E-value=0.94 Score=29.36 Aligned_cols=36 Identities=19% Similarity=0.270 Sum_probs=26.2
Q ss_pred hhCCC---CcccEEEE---CCee--eecc-------CCCHHHHHHHHHHHh
Q 030793 135 YSANI---SGVPHFVL---NGKH--ELSG-------GQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv---~gvPtfvv---~~~~--~i~G-------~~~~~~~~~~l~~~~ 170 (171)
.++|| .|+||+++ +|+. ...| ..+.+.+.+.|+++.
T Consensus 82 ~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 82 QAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp HHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHhCCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 36899 99999986 3552 2345 568888888888764
No 158
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=86.69 E-value=0.35 Score=30.28 Aligned_cols=20 Identities=15% Similarity=0.308 Sum_probs=16.0
Q ss_pred hCCCCcccEEEECCeeeeccC
Q 030793 136 SANISGVPHFVLNGKHELSGG 156 (171)
Q Consensus 136 ~~gv~gvPtfvv~~~~~i~G~ 156 (171)
..|+.++|+++++|++ +.|.
T Consensus 63 ~~g~~~vP~i~~~g~~-i~g~ 82 (105)
T 1kte_A 63 LTGARTVPRVFIGKEC-IGGC 82 (105)
T ss_dssp HHSCCCSCEEEETTEE-EESH
T ss_pred HhCCCCcCeEEECCEE-Eecc
Confidence 4689999999999984 5553
No 159
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=86.32 E-value=0.57 Score=30.38 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=25.3
Q ss_pred hCCCCcccEEEE--CCe----eeec-cCCCHHHHHHHHHHHh
Q 030793 136 SANISGVPHFVL--NGK----HELS-GGQPPEVYLRAFQVAA 170 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~----~~i~-G~~~~~~~~~~l~~~~ 170 (171)
+++|.|+||+++ +|+ ..+. |..+.+.|.+.|++..
T Consensus 76 ~~~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~ 117 (133)
T 2dj3_A 76 QYKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHA 117 (133)
T ss_dssp SCCCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHS
T ss_pred hcCCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhc
Confidence 589999999987 232 1234 5578888998888753
No 160
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=85.92 E-value=1.2 Score=27.31 Aligned_cols=54 Identities=9% Similarity=0.024 Sum_probs=32.5
Q ss_pred HHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCC--CCcccEEEECCeeeeccCCCH
Q 030793 100 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSAN--ISGVPHFVLNGKHELSGGQPP 159 (171)
Q Consensus 100 ~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~g--v~gvPtfvv~~~~~i~G~~~~ 159 (171)
....++..+.|++-..-.++.. ...++.+.. ..| ...+|.++++|++ +.|..+.
T Consensus 22 ~~ak~~L~~~~i~~~~~di~~~----~~~~~~l~~-~~g~~~~~vP~ifi~g~~-igG~d~l 77 (93)
T 1t1v_A 22 SEVTRILDGKRIQYQLVDISQD----NALRDEMRT-LAGNPKATPPQIVNGNHY-CGDYELF 77 (93)
T ss_dssp HHHHHHHHHTTCCCEEEETTSC----HHHHHHHHH-HTTCTTCCSCEEEETTEE-EEEHHHH
T ss_pred HHHHHHHHHCCCceEEEECCCC----HHHHHHHHH-HhCCCCCCCCEEEECCEE-EeCHHHH
Confidence 4566677788887552223221 344444433 246 7799999999984 6665433
No 161
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=85.82 E-value=0.74 Score=29.93 Aligned_cols=59 Identities=15% Similarity=0.147 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE-C--Cee--eeccCCCHHHHHHHH
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL-N--GKH--ELSGGQPPEVYLRAF 166 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv-~--~~~--~i~G~~~~~~~~~~l 166 (171)
+.+.+.++.++.|++.. .+.+.. ..+ ...+|+.++|++++ + |+. ...|..+.+.|.+.|
T Consensus 81 ~~~~~~~~~~~~~~~~~--~~~d~~---~~~-----~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 81 NQQVVEDFIKANKLTFP--IVLDSK---GEL-----MKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CHHHHHHHHHHTTCCSC--EEECSS---SHH-----HHHTTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred CHHHHHHHHHHcCCcee--EEEcCc---hhH-----HHhcCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 56677777777777643 222211 122 13589999999765 3 442 457888999988876
No 162
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=85.61 E-value=0.65 Score=29.72 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=23.8
Q ss_pred hhCCCCcccEEEE--C----Cee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--N----GKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~----~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ + |+. .+.|..+ +.+.+.+++.
T Consensus 70 ~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~ 111 (118)
T 2f51_A 70 DAYGVSSIPALFFVKKEGNEIKTLDQFVGADV-SRIKADIEKF 111 (118)
T ss_dssp HHTTCCSSSEEEEEEEETTEEEEEEEEESCCH-HHHHHHHHHH
T ss_pred HhcCCCCCCEEEEEeCCCCcceEEEeecCCCH-HHHHHHHHHh
Confidence 3689999999987 3 442 3567764 5588877753
No 163
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=85.56 E-value=1.1 Score=28.72 Aligned_cols=58 Identities=24% Similarity=0.221 Sum_probs=32.3
Q ss_pred HHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCCCHH
Q 030793 100 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPPE 160 (171)
Q Consensus 100 ~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~~~~ 160 (171)
.....+..+.|++-..-.++. .....++++.+.. ..|..++|+++++|+ .+.|..+..
T Consensus 31 ~~ak~~L~~~~i~~~~~dvd~-~~~~~~~~~~l~~-~~g~~tvP~vfi~g~-~igG~d~l~ 88 (114)
T 3h8q_A 31 TRVKELFSSLGVECNVLELDQ-VDDGARVQEVLSE-ITNQKTVPNIFVNKV-HVGGCDQTF 88 (114)
T ss_dssp HHHHHHHHHTTCCCEEEETTT-STTHHHHHHHHHH-HHSCCSSCEEEETTE-EEESHHHHH
T ss_pred HHHHHHHHHcCCCcEEEEecC-CCChHHHHHHHHH-HhCCCccCEEEECCE-EEeCHHHHH
Confidence 345566677777654111221 0111334444432 357899999999998 476654433
No 164
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=85.55 E-value=1.5 Score=27.91 Aligned_cols=52 Identities=17% Similarity=0.328 Sum_probs=31.7
Q ss_pred HHHHHHHHHcCCchh-HhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCCC
Q 030793 100 EFLVECARKVGVEGA-AEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQP 158 (171)
Q Consensus 100 ~~L~~ia~~~Gld~~-~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~~ 158 (171)
....++..+.|++-. ..+..+ ..+++.+.. ..|..++|.++|||+ .|.|..+
T Consensus 37 ~~ak~~L~~~gi~~~~~dI~~~-----~~~~~~l~~-~~g~~tvP~ifi~g~-~iGG~d~ 89 (109)
T 3ipz_A 37 NTVVQILKNLNVPFEDVNILEN-----EMLRQGLKE-YSNWPTFPQLYIGGE-FFGGCDI 89 (109)
T ss_dssp HHHHHHHHHTTCCCEEEEGGGC-----HHHHHHHHH-HHTCSSSCEEEETTE-EEECHHH
T ss_pred HHHHHHHHHcCCCcEEEECCCC-----HHHHHHHHH-HHCCCCCCeEEECCE-EEeCHHH
Confidence 346667777788754 222222 344444443 237789999999998 4666543
No 165
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=85.35 E-value=0.77 Score=27.87 Aligned_cols=51 Identities=12% Similarity=0.143 Sum_probs=28.3
Q ss_pred HHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCC
Q 030793 101 FLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQ 157 (171)
Q Consensus 101 ~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~ 157 (171)
.+..+..+.|++-..-.++. + ....+++.. ..|+.++|+++++|+ .+.|..
T Consensus 21 ~~~~~L~~~~i~~~~~di~~-~---~~~~~~l~~-~~~~~~vP~l~~~g~-~i~g~~ 71 (92)
T 2khp_A 21 RAKALLARKGAEFNEIDASA-T---PELRAEMQE-RSGRNTFPQIFIGSV-HVGGCD 71 (92)
T ss_dssp HHHHHHHHTTCCCEEEESTT-S---HHHHHHHHH-HHTSSCCCEEEETTE-EEESHH
T ss_pred HHHHHHHHcCCCcEEEECCC-C---HHHHHHHHH-HhCCCCcCEEEECCE-EEcCHH
Confidence 34555666677654111221 1 233333332 358899999999997 465543
No 166
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=85.24 E-value=0.54 Score=31.84 Aligned_cols=63 Identities=19% Similarity=0.323 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCccc-EEEEC--Cee--eeccCCCHHHHHHHHHHH
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVP-HFVLN--GKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvP-tfvv~--~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
+.+.+.+++++.|++... .+.+.. ..+. ..+||.|+| +|+|+ |+. ...|..+.+.+.+.|+++
T Consensus 91 ~~~~~~~~~~~~~~~~~~-~~~d~~---~~~~-----~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 91 DRQKAISWLKELGNPYAL-SLFDGD---GMLG-----LDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPL 158 (168)
T ss_dssp CHHHHHHHHHHHCCCCSE-EEEETT---CHHH-----HHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHH
T ss_pred ChHHHHHHHHHcCCCCce-eeECcc---hHHH-----HHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence 466777777777776431 111211 1121 357899999 67775 542 346888888888776654
No 167
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=84.88 E-value=1.1 Score=32.05 Aligned_cols=35 Identities=14% Similarity=0.259 Sum_probs=27.7
Q ss_pred hhCCCCcccEEEE--CCee-eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH-ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~-~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. ...|..+.+.+.+.|.+.
T Consensus 198 ~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~~l~~~l~~~ 235 (241)
T 3idv_A 198 KRFDVSGYPTLKIFRKGRPYDYNGPREKYGIVDYMIEQ 235 (241)
T ss_dssp HHTTCCSSSEEEEEETTEEEECCSCCSHHHHHHHHHHH
T ss_pred HHcCCcccCEEEEEECCeEEEecCCCCHHHHHHHHHhh
Confidence 4799999999987 5653 347888999999988764
No 168
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=84.70 E-value=0.52 Score=31.22 Aligned_cols=23 Identities=30% Similarity=0.549 Sum_probs=17.4
Q ss_pred hCCCCcccEEEECCeeeeccCCCH
Q 030793 136 SANISGVPHFVLNGKHELSGGQPP 159 (171)
Q Consensus 136 ~~gv~gvPtfvv~~~~~i~G~~~~ 159 (171)
..|..+||+++++|++ +.|..+.
T Consensus 89 ~~g~~tVP~vfi~g~~-igG~d~l 111 (129)
T 3ctg_A 89 ISGQKTVPNVYINGKH-IGGNSDL 111 (129)
T ss_dssp HHSCCSSCEEEETTEE-EESHHHH
T ss_pred HhCCCCCCEEEECCEE-EcCHHHH
Confidence 3588999999999984 6665433
No 169
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=84.40 E-value=1.5 Score=28.60 Aligned_cols=64 Identities=17% Similarity=0.075 Sum_probs=36.9
Q ss_pred HHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE---CCeeeeccCCCHHHHHHHHHHHh
Q 030793 99 KEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL---NGKHELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 99 ~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv---~~~~~i~G~~~~~~~~~~l~~~~ 170 (171)
.+.+.+.+++.|++.. .+.+.......+. ..+|+.++|++++ +|+. +....+.+.+.+.|+++.
T Consensus 79 ~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~-----~~~~v~~~P~~~lid~~G~i-~~~~~~~~~l~~~l~~ll 145 (148)
T 3fkf_A 79 REAWETAIKKDTLSWD--QVCDFTGLSSETA-----KQYAILTLPTNILLSPTGKI-LARDIQGEALTGKLKELL 145 (148)
T ss_dssp HHHHHHHHHHTTCCSE--EECCSCGGGCHHH-----HHTTCCSSSEEEEECTTSBE-EEESCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCce--EEEccCCcchHHH-----HhcCCCCcCEEEEECCCCeE-EEecCCHHHHHHHHHHHH
Confidence 4456666677777653 2222110011111 3589999999765 3552 332338888999888765
No 170
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.13 E-value=1.1 Score=29.49 Aligned_cols=20 Identities=25% Similarity=0.451 Sum_probs=16.1
Q ss_pred hCCCCcccEEEECCeeeeccC
Q 030793 136 SANISGVPHFVLNGKHELSGG 156 (171)
Q Consensus 136 ~~gv~gvPtfvv~~~~~i~G~ 156 (171)
..|+.++|+++++|+ .+.|.
T Consensus 75 ~~g~~~vP~l~i~G~-~igg~ 94 (130)
T 2cq9_A 75 MTGERTVPRIFVNGT-FIGGA 94 (130)
T ss_dssp HHSSCCSSEEEETTE-EEEEH
T ss_pred HhCCCCcCEEEECCE-EEcCh
Confidence 468999999999998 46554
No 171
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=83.96 E-value=1.2 Score=29.00 Aligned_cols=34 Identities=15% Similarity=0.094 Sum_probs=24.5
Q ss_pred hhCCCCcccEEEE--CCee--eeccCC-------CHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQ-------PPEVYLRAFQV 168 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~-------~~~~~~~~l~~ 168 (171)
.+++|.++|||++ +|+. .+.|.. +.+.++..|.+
T Consensus 67 ~~~~v~~~PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 67 QHYHDNCLPTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp TTCCGGGCSEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred HHCCCCCCCEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 4799999999987 5652 345654 57778877764
No 172
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=83.82 E-value=1.1 Score=28.48 Aligned_cols=57 Identities=18% Similarity=0.246 Sum_probs=30.9
Q ss_pred HHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCCC
Q 030793 100 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQP 158 (171)
Q Consensus 100 ~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~~ 158 (171)
..+..+..+.|++-..-.++.......++++.+.. ..|..++|+++++|+ .|.|..+
T Consensus 33 ~~~~~~L~~~~i~~~~~di~~~~~~~~~~~~~l~~-~~g~~tvP~ifi~g~-~igG~~~ 89 (113)
T 3rhb_A 33 TEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLER-LTGQHTVPNVFVCGK-HIGGCTD 89 (113)
T ss_dssp HHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHHHHH-HHSCCSSCEEEETTE-EEESHHH
T ss_pred HHHHHHHHHcCCCCeEEEeecCCCChHHHHHHHHH-HhCCCCcCEEEECCE-EEcCcHH
Confidence 34566777778765411111100011233333332 358899999999998 4666543
No 173
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=83.79 E-value=1.4 Score=31.60 Aligned_cols=35 Identities=17% Similarity=0.361 Sum_probs=27.1
Q ss_pred hhCCCCcccEEEE--CCe-eeeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGK-HELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~-~~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+ ....|..+.+.+.+.+.+.
T Consensus 83 ~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~~l~~~i~~~ 120 (241)
T 3idv_A 83 SRFDVSGYPTIKILKKGQAVDYEGSRTQEEIVAKVREV 120 (241)
T ss_dssp HHTTCCSSSEEEEEETTEEEECCSCSCHHHHHHHHHHH
T ss_pred HhcCCCcCCEEEEEcCCCcccccCcccHHHHHHHHhhc
Confidence 4699999999987 454 2346888999999888765
No 174
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=83.76 E-value=1.6 Score=28.79 Aligned_cols=58 Identities=3% Similarity=-0.114 Sum_probs=35.3
Q ss_pred HHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhh-------CCCCcccEEEECCeeeeccCCCHHHH
Q 030793 100 EFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYS-------ANISGVPHFVLNGKHELSGGQPPEVY 162 (171)
Q Consensus 100 ~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~-------~gv~gvPtfvv~~~~~i~G~~~~~~~ 162 (171)
.....+....|++-.+-.++.. .+.++++.... .|...+|.++++|+| +.|..+...+
T Consensus 20 ~~aK~lL~~kgV~feEidI~~d----~~~r~eM~~~~~~~~~~~~G~~tvPQIFi~~~~-iGG~Dd~~~l 84 (121)
T 1u6t_A 20 QDVLGFLEANKIGFEEKDIAAN----EENRKWMRENVPENSRPATGYPLPPQIFNESQY-RGDYDAFFEA 84 (121)
T ss_dssp HHHHHHHHHTTCCEEEEECTTC----HHHHHHHHHHSCGGGSCSSSSCCSCEEEETTEE-EEEHHHHHHH
T ss_pred HHHHHHHHHCCCceEEEECCCC----HHHHHHHHHhccccccccCCCcCCCEEEECCEE-EechHHHHHh
Confidence 3566788888987653223321 34444444321 288899999999985 7665544444
No 175
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=83.67 E-value=1.1 Score=31.84 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=24.3
Q ss_pred hhCCCCcccEEEE--CCe---eeeccCCCHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGK---HELSGGQPPEVYLRAFQV 168 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~---~~i~G~~~~~~~~~~l~~ 168 (171)
.++||.++||+++ +|+ ....|..+.+.+...+..
T Consensus 72 ~~~~v~~~Pt~~~~~~g~~~~~~~~G~~~~~~l~~~l~~ 110 (226)
T 1a8l_A 72 KRYRIDRAPATTITQDGKDFGVRYFGLPAGHEFAAFLED 110 (226)
T ss_dssp HHTTCCSSSEEEEEETTBCCSEEEESCCCTTHHHHHHHH
T ss_pred HHcCCCcCceEEEEcCCceeeEEEeccCcHHHHHHHHHH
Confidence 4799999999998 563 345687766666665554
No 176
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=83.66 E-value=1.2 Score=26.90 Aligned_cols=55 Identities=13% Similarity=-0.034 Sum_probs=30.5
Q ss_pred HHHHHHHHcCCchhHhhhcC-CCCChHHHHHHHHHhhCCCC-----cccEEEE-CCeeeeccCC
Q 030793 101 FLVECARKVGVEGAAEFLDD-PNSGLNEVHEELKKYSANIS-----GVPHFVL-NGKHELSGGQ 157 (171)
Q Consensus 101 ~L~~ia~~~Gld~~~~~~~~-~~~~~~~v~~~~~~~~~gv~-----gvPtfvv-~~~~~i~G~~ 157 (171)
....+..+.|++-..-.++. +.....+.++++.. ..|.. ++|.+++ +|++ +.|..
T Consensus 19 ~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~-~~g~~~~~~~tvP~v~i~~g~~-igG~d 80 (87)
T 1aba_A 19 NAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLT-KLGRDTQIGLTMPQVFAPDGSH-IGGFD 80 (87)
T ss_dssp HHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHH-HHTCSCCTTCCSCEEECTTSCE-EESHH
T ss_pred HHHHHHHHcCCCEEEEEeeccccccCHHHHHHHHH-HhCCCCCCCCccCEEEEECCEE-EeCHH
Confidence 45567777888755211221 00011345454443 23666 8999999 8884 66643
No 177
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=83.27 E-value=1.2 Score=30.13 Aligned_cols=20 Identities=25% Similarity=0.451 Sum_probs=16.2
Q ss_pred hCCCCcccEEEECCeeeeccC
Q 030793 136 SANISGVPHFVLNGKHELSGG 156 (171)
Q Consensus 136 ~~gv~gvPtfvv~~~~~i~G~ 156 (171)
..|+.++|+++++|+ .+.|.
T Consensus 97 ~~g~~tvP~ifi~G~-~igG~ 116 (146)
T 2ht9_A 97 MTGERTVPRIFVNGT-FIGGA 116 (146)
T ss_dssp HHSCCCSCEEEETTE-EEESH
T ss_pred HhCCCCcCeEEECCE-EEeCc
Confidence 478999999999998 46554
No 178
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=83.25 E-value=1.3 Score=29.33 Aligned_cols=65 Identities=14% Similarity=0.065 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE---CCeeeeccCCCHHHHHHHHHHHh
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL---NGKHELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv---~~~~~i~G~~~~~~~~~~l~~~~ 170 (171)
+.+.+.+..++.|++.. .+.+. ......+ ...+||.++|++++ +|+. +....+.+.+.+.|+++.
T Consensus 73 ~~~~~~~~~~~~~~~~~--~~~d~----~~~~~~~-~~~~~v~~~P~~~lid~~G~i-~~~~~~~~~l~~~l~~l~ 140 (152)
T 2lrn_A 73 REEDWKKAIEEDKSYWN--QVLLQ----KDDVKDV-LESYCIVGFPHIILVDPEGKI-VAKELRGDDLYNTVEKFV 140 (152)
T ss_dssp CHHHHHHHHHHHTCCSE--EEEEC----HHHHHHH-HHHTTCCSSCEEEEECTTSEE-EEECCCTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCe--EEecc----cchhHHH-HHHhCCCcCCeEEEECCCCeE-EEeeCCHHHHHHHHHHHH
Confidence 34556666666676543 22221 1111111 23689999999654 3552 322245667777777654
No 179
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=83.17 E-value=0.94 Score=31.21 Aligned_cols=65 Identities=11% Similarity=0.216 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCccc-EEEEC--Cee--eeccCCCHHHHHHHHHHHh
Q 030793 97 GDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVP-HFVLN--GKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 97 ~~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvP-tfvv~--~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.+.+.+.+++++.|++... .+.+.. ..+. ..+|+.++| +|+|+ |+. ...|..+.+.+.+.|+++.
T Consensus 97 d~~~~~~~~~~~~~~~~~~-~~~d~~---~~~~-----~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 97 DDNAAAIKWLNELHNPYLL-SISDAD---GTLG-----LDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp CCHHHHHHHHHHTTCCCSE-EEEETT---CHHH-----HHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHH
T ss_pred CCHHHHHHHHHHcCCCCce-EEECCc---chHH-----HHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 4677888888888876431 122211 1222 257899999 56665 542 3468888888887776643
No 180
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=82.97 E-value=0.48 Score=28.71 Aligned_cols=21 Identities=14% Similarity=0.308 Sum_probs=16.2
Q ss_pred hC-CCCcccEEEECCeeeeccCC
Q 030793 136 SA-NISGVPHFVLNGKHELSGGQ 157 (171)
Q Consensus 136 ~~-gv~gvPtfvv~~~~~i~G~~ 157 (171)
.. |+.++|+++++|+ .+.|..
T Consensus 49 ~~~~~~~vP~l~~~g~-~i~g~~ 70 (89)
T 2klx_A 49 RANGRNTFPQIFIGDY-HVGGCD 70 (89)
T ss_dssp HHHSSCCSCEEEETTE-ECCSHH
T ss_pred HhCCCCCcCEEEECCE-EEeChH
Confidence 35 8999999999998 365543
No 181
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=82.90 E-value=2.2 Score=27.26 Aligned_cols=52 Identities=23% Similarity=0.393 Sum_probs=31.3
Q ss_pred HHHHHHHHHcCCchh-HhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCCC
Q 030793 100 EFLVECARKVGVEGA-AEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQP 158 (171)
Q Consensus 100 ~~L~~ia~~~Gld~~-~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~~ 158 (171)
....++..+.|++-. ..+..+ ..+++.+... .|...+|.++|+|+ .|.|..+
T Consensus 35 ~~ak~~L~~~gi~y~~~di~~d-----~~~~~~l~~~-~g~~tvP~ifi~g~-~iGG~d~ 87 (111)
T 3zyw_A 35 KQMVEILHKHNIQFSSFDIFSD-----EEVRQGLKAY-SSWPTYPQLYVSGE-LIGGLDI 87 (111)
T ss_dssp HHHHHHHHHTTCCCEEEEGGGC-----HHHHHHHHHH-HTCCSSCEEEETTE-EEECHHH
T ss_pred HHHHHHHHHcCCCeEEEECcCC-----HHHHHHHHHH-HCCCCCCEEEECCE-EEecHHH
Confidence 345566777788754 222222 3444444432 37789999999998 4666543
No 182
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.46 E-value=1.4 Score=28.25 Aligned_cols=53 Identities=9% Similarity=-0.064 Sum_probs=32.2
Q ss_pred HHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhh-------CCCCcccEEEECCeeeeccCCC
Q 030793 101 FLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYS-------ANISGVPHFVLNGKHELSGGQP 158 (171)
Q Consensus 101 ~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~-------~gv~gvPtfvv~~~~~i~G~~~ 158 (171)
....+..+.|++-..-.+... ...++.+...- .|...+|.++|+|++ |.|..+
T Consensus 29 ~ak~~L~~~gi~y~~vdI~~~----~~~~~~l~~~~~~~~~~~~g~~tvP~vfi~g~~-iGG~d~ 88 (111)
T 2ct6_A 29 DVVRFLEANKIEFEEVDITMS----EEQRQWMYKNVPPEKKPTQGNPLPPQIFNGDRY-CGDYDS 88 (111)
T ss_dssp HHHHHHHHTTCCEEEEETTTC----HHHHHHHHHSCCTTTCCSSSSCCSCEEEETTEE-EEEHHH
T ss_pred HHHHHHHHcCCCEEEEECCCC----HHHHHHHHHHhcccccccCCCCCCCEEEECCEE-EeCHHH
Confidence 466777888887552222221 34444444321 288899999999984 666443
No 183
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=81.60 E-value=2.2 Score=28.55 Aligned_cols=53 Identities=23% Similarity=0.327 Sum_probs=30.9
Q ss_pred HHHHHHHHHcCCchh-HhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCCCH
Q 030793 100 EFLVECARKVGVEGA-AEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPP 159 (171)
Q Consensus 100 ~~L~~ia~~~Gld~~-~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~~~ 159 (171)
.....+..+.|++-. ..+..+ ..+++.+.. ..|..++|.++|+|++ |.|..+.
T Consensus 54 ~~ak~~L~~~gv~y~~vdI~~d-----~~~~~~L~~-~~G~~tvP~VfI~G~~-iGG~d~l 107 (135)
T 2wci_A 54 AQAVQALAACGERFAYVDILQN-----PDIRAELPK-YANWPTFPQLWVDGEL-VGGCDIV 107 (135)
T ss_dssp HHHHHHHHTTCSCCEEEEGGGC-----HHHHHHHHH-HHTCCSSCEEEETTEE-EESHHHH
T ss_pred HHHHHHHHHcCCceEEEECCCC-----HHHHHHHHH-HHCCCCcCEEEECCEE-EEChHHH
Confidence 345556666677654 222222 234444433 2477899999999984 6665433
No 184
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=81.39 E-value=2.1 Score=28.06 Aligned_cols=63 Identities=17% Similarity=0.181 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEE-EEC--Cee--eeccCC--CHHHHHHHHHHHh
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHF-VLN--GKH--ELSGGQ--PPEVYLRAFQVAA 170 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtf-vv~--~~~--~i~G~~--~~~~~~~~l~~~~ 170 (171)
+.+.+.++.++.|++.. .+.+.. ..+ ...+|+.++|++ +|+ |+. ...|.. +.+.+.+.|++..
T Consensus 72 ~~~~~~~~~~~~~~~~~--~~~d~~---~~~-----~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 72 KTGDAMKFLAQVPAEFT--VAFDPK---GQT-----PRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAAL 141 (152)
T ss_dssp SHHHHHHHHHHSCCCSE--EEECTT---CHH-----HHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCCc--eeECCc---chh-----HHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHH
Confidence 45667777777777643 222211 112 135899999995 553 542 345654 4578998888764
No 185
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=80.63 E-value=2 Score=28.03 Aligned_cols=36 Identities=14% Similarity=0.103 Sum_probs=27.3
Q ss_pred hhCCCCc--ccEEEE-C---C-eeeec--cCCCHHHHHHHHHHHh
Q 030793 135 YSANISG--VPHFVL-N---G-KHELS--GGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~g--vPtfvv-~---~-~~~i~--G~~~~~~~~~~l~~~~ 170 (171)
..+||.+ +||+++ + | +|.+. |..+.+.+.+.|++..
T Consensus 70 ~~~gi~~~~iPtl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 70 GNLNLKTDKFPAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp TTTTCCSSSSSEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHH
T ss_pred HHcCCCcccCCEEEEEecCcCcccCCCCccccCHHHHHHHHHHHH
Confidence 4799999 999976 2 3 25554 9999999988887643
No 186
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=80.20 E-value=2.3 Score=33.21 Aligned_cols=36 Identities=22% Similarity=0.248 Sum_probs=28.2
Q ss_pred hhCCCCcccEEEE--CCee---eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGKH---ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~---~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ +|+. ...|..+.+.+.+.|.+..
T Consensus 76 ~~~~v~~~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~ 116 (382)
T 2r2j_A 76 QRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQK 116 (382)
T ss_dssp HHTTCCEESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHH
T ss_pred HhcCCCcCCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhc
Confidence 3699999999987 5663 2578889999998887653
No 187
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=79.74 E-value=1.5 Score=27.78 Aligned_cols=53 Identities=23% Similarity=0.303 Sum_probs=32.2
Q ss_pred HHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCC
Q 030793 99 KEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQ 157 (171)
Q Consensus 99 ~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~ 157 (171)
=.....+..+.|++-..-.+.. + ..+.+.+.. ..|..++|.++++|++ +.|..
T Consensus 33 C~~ak~~L~~~~i~~~~vdi~~-~---~~~~~~l~~-~~g~~~vP~ifi~g~~-igG~d 85 (109)
T 1wik_A 33 SKQILEILNSTGVEYETFDILE-D---EEVRQGLKT-FSNWPTYPQLYVRGDL-VGGLD 85 (109)
T ss_dssp HHHHHHHHHHTCSCEEEEESSS-C---HHHHHHHHH-HHSCCSSCEEECSSSE-EECHH
T ss_pred HHHHHHHHHHcCCCeEEEECCC-C---HHHHHHHHH-HhCCCCCCEEEECCEE-EcCHH
Confidence 4456777788888754212222 1 344444432 3478999999999984 66643
No 188
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=79.29 E-value=2.5 Score=31.14 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=27.1
Q ss_pred hhCCCC--cccEEEE--CCe----eeeccCCCHHHHHHHHHHH
Q 030793 135 YSANIS--GVPHFVL--NGK----HELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~--gvPtfvv--~~~----~~i~G~~~~~~~~~~l~~~ 169 (171)
.++||. |+|||++ +|+ ..+.|..+.+.|.+.|.+.
T Consensus 75 ~~~~V~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 75 EKYKLDKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp HHTTCCGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred HHcCCCCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHh
Confidence 369999 9999987 565 2456888999998888753
No 189
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=78.83 E-value=0.85 Score=29.19 Aligned_cols=20 Identities=15% Similarity=0.225 Sum_probs=16.1
Q ss_pred hCCCCcccEEEECCeeeeccC
Q 030793 136 SANISGVPHFVLNGKHELSGG 156 (171)
Q Consensus 136 ~~gv~gvPtfvv~~~~~i~G~ 156 (171)
..|+.++|+++++|++ +.|.
T Consensus 70 ~~g~~~vP~v~i~g~~-igg~ 89 (114)
T 2hze_A 70 ITGGKTVPRIFFGKTS-IGGY 89 (114)
T ss_dssp HHSCCSSCEEEETTEE-EESH
T ss_pred HhCCCCcCEEEECCEE-EeCc
Confidence 4689999999999984 6554
No 190
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=78.64 E-value=3.3 Score=26.88 Aligned_cols=53 Identities=30% Similarity=0.406 Sum_probs=31.8
Q ss_pred HHHHHHHHHcCCc-hhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCCC
Q 030793 100 EFLVECARKVGVE-GAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQP 158 (171)
Q Consensus 100 ~~L~~ia~~~Gld-~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~~ 158 (171)
....++..+.|++ -..-.+.. + .++++.+... .|...||.++|+|+ .|.|..+
T Consensus 39 ~~ak~lL~~~gv~~~~~vdV~~-d---~~~~~~l~~~-tg~~tvP~vfI~g~-~IGG~d~ 92 (118)
T 2wem_A 39 NAVVQILRLHGVRDYAAYNVLD-D---PELRQGIKDY-SNWPTIPQVYLNGE-FVGGCDI 92 (118)
T ss_dssp HHHHHHHHHTTCCCCEEEESSS-C---HHHHHHHHHH-HTCCSSCEEEETTE-EEESHHH
T ss_pred HHHHHHHHHcCCCCCEEEEcCC-C---HHHHHHHHHH-hCCCCcCeEEECCE-EEeChHH
Confidence 3566677788884 44111222 1 3455544432 37789999999998 4666543
No 191
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=77.60 E-value=2.9 Score=27.20 Aligned_cols=54 Identities=19% Similarity=0.238 Sum_probs=32.6
Q ss_pred HHHHHHHHHcCCchh---HhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCCCH
Q 030793 100 EFLVECARKVGVEGA---AEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPP 159 (171)
Q Consensus 100 ~~L~~ia~~~Gld~~---~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~~~ 159 (171)
....++..+.|++.. .-.+.. + .++++.+.. ..|...||.++|+|+ .|.|..+.
T Consensus 35 ~~ak~lL~~~gv~~~~~~~~dv~~-~---~~~~~~l~~-~sg~~tvP~vfI~g~-~iGG~d~l 91 (121)
T 3gx8_A 35 RATIGLLGNQGVDPAKFAAYNVLE-D---PELREGIKE-FSEWPTIPQLYVNKE-FIGGCDVI 91 (121)
T ss_dssp HHHHHHHHHHTBCGGGEEEEECTT-C---HHHHHHHHH-HHTCCSSCEEEETTE-EEESHHHH
T ss_pred HHHHHHHHHcCCCcceEEEEEecC-C---HHHHHHHHH-HhCCCCCCeEEECCE-EEecHHHH
Confidence 456677788888732 111222 1 345555443 247789999999998 46665433
No 192
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=77.54 E-value=1.6 Score=28.47 Aligned_cols=64 Identities=13% Similarity=0.153 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHcCCc-hhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE---CCee--eeccCCCHHHHHHHHHHH
Q 030793 98 DKEFLVECARKVGVE-GAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL---NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld-~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv---~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
+.+.+.+++++.|++ .. .+.+.. ....+. ..+|+.++|++++ +|+. ...|..+.+.+.+.+.++
T Consensus 75 ~~~~~~~~~~~~~~~~~~--~~~d~~-~~~~~~-----~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 75 KDEEWLKFIRSKKIGGWL--NVRDSK-NHTDFK-----ITYDIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp SSHHHHHHHHHHTCTTSE--EEECTT-CCCCHH-----HHHCCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCce--EEeccc-cchhHH-----HhcCcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHH
Confidence 345677777777776 22 122211 110111 2588999999876 3542 234665666666665543
No 193
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=77.09 E-value=3.1 Score=27.34 Aligned_cols=65 Identities=18% Similarity=0.148 Sum_probs=37.6
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE-C--CeeeeccCCCHHHHHHHHHHHh
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL-N--GKHELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv-~--~~~~i~G~~~~~~~~~~l~~~~ 170 (171)
+.+.+.+++++.|++.. .+.+.......+. ..+||.++|++++ + |+. +.-..+.+.+.+.|+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~-----~~~~v~~~P~~~lid~~G~i-~~~~~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 80 DKQQWKDAIKRDTLDWE--QVCDFGGLNSEVA-----KQYSIYKIPANILLSSDGKI-LAKNLRGEELKKKIENIV 147 (150)
T ss_dssp CHHHHHHHHHHTTCCSE--EECCSCGGGCHHH-----HHTTCCSSSEEEEECTTSBE-EEESCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCce--EEEcCcccchHHH-----HHcCCCccCeEEEECCCCEE-EEccCCHHHHHHHHHHHH
Confidence 34667777777887653 2222110011121 3589999998875 3 552 222247888888887654
No 194
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=76.46 E-value=2.2 Score=29.33 Aligned_cols=64 Identities=17% Similarity=0.133 Sum_probs=39.1
Q ss_pred CCHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE-C--CeeeeccCC----------CHHHHH
Q 030793 97 GDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL-N--GKHELSGGQ----------PPEVYL 163 (171)
Q Consensus 97 ~~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv-~--~~~~i~G~~----------~~~~~~ 163 (171)
.+.+.+.+++++.|++.. .+.+.. ..+. ..+|+.++|++++ + |+....|.. +.+.+.
T Consensus 82 d~~~~~~~~~~~~~~~~~--~~~d~~---~~~~-----~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~ 151 (188)
T 2cvb_A 82 DAPEKMAAFAEEHGIFFP--YLLDET---QEVA-----KAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLE 151 (188)
T ss_dssp GSHHHHHHHHHHHTCCSC--EEECSS---SHHH-----HHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHH
T ss_pred cCHHHHHHHHHHhCCCce--EEECCc---chHH-----HHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHH
Confidence 356778888888887643 222311 1221 3589999998755 3 553333442 567888
Q ss_pred HHHHHHh
Q 030793 164 RAFQVAA 170 (171)
Q Consensus 164 ~~l~~~~ 170 (171)
+.|+++.
T Consensus 152 ~~i~~ll 158 (188)
T 2cvb_A 152 AAIEALL 158 (188)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888764
No 195
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=76.45 E-value=2.4 Score=30.20 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=24.1
Q ss_pred hhCCCCcccEEEEC-C-e--eeeccCCCHHHHHHHHHH
Q 030793 135 YSANISGVPHFVLN-G-K--HELSGGQPPEVYLRAFQV 168 (171)
Q Consensus 135 ~~~gv~gvPtfvv~-~-~--~~i~G~~~~~~~~~~l~~ 168 (171)
.++||.|+||+++- | + ..+.|..+.+.+...+..
T Consensus 75 ~~~~v~~~Ptl~~~~~~~~~~~~~G~~~~~~l~~~~~~ 112 (229)
T 2ywm_A 75 EKYGVDRVPTIVIEGDKDYGIRYIGLPAGLEFTTLING 112 (229)
T ss_dssp HHTTCCBSSEEEEESSSCCCEEEESCCCTTHHHHHHHH
T ss_pred HHcCCCcCcEEEEECCCcccceecCCccHHHHHHHHHH
Confidence 46999999999874 3 2 235788777777666554
No 196
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=76.25 E-value=3.2 Score=28.30 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=25.4
Q ss_pred hhCCCCcccEEEE-C---Ce-e-eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL-N---GK-H-ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv-~---~~-~-~i~G~~~~~~~~~~l~~~~ 170 (171)
..+++.|+|+++| + |+ . .+.| .+.+.|.+.|+++.
T Consensus 95 ~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 95 QFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp HHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHH
Confidence 3688999999976 2 32 1 2344 89999999888754
No 197
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=76.08 E-value=3.6 Score=28.10 Aligned_cols=66 Identities=14% Similarity=0.107 Sum_probs=41.6
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCccc-EEEEC--Cee--eeccCCCHHHHHHHHHHHh
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVP-HFVLN--GKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvP-tfvv~--~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
+.+.+.+++++.|++.. .+.+.. . .+...+ ..+++.++| +|+|+ |+. ...|..+.+.+.+.|+++.
T Consensus 110 ~~~~~~~~~~~~~~~~~--~~~d~~-~--~~~~~~--~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 110 SRDIAQDFVTDNGLDYP--SIYDPP-F--MTAASL--GGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp CHHHHHHHHHHTTCCSC--EEECTT-C--GGGGGT--TTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCcc--EEECCc-c--hHHHHh--ccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 47888899999888754 222211 0 111111 135799999 56675 442 3468888999999988764
No 198
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.81 E-value=5.4 Score=23.60 Aligned_cols=31 Identities=13% Similarity=0.240 Sum_probs=25.1
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 83 EELFLGYFTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 83 ~~l~~a~~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
..++++||...... +.+.+..||..+||+.+
T Consensus 17 l~~Lk~yF~~n~~P-s~eei~~LA~~lgL~~~ 47 (71)
T 2da7_A 17 MSVLKAYYAMNMEP-NSDELLKISIAVGLPQE 47 (71)
T ss_dssp HHHHHHHHHHCSSC-CHHHHHHHHHHHTCCHH
T ss_pred HHHHHHHHHhCCCC-CHHHHHHHHHHhCCCHH
Confidence 46778888877766 57779999999999976
No 199
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=74.27 E-value=2.1 Score=29.64 Aligned_cols=64 Identities=19% Similarity=0.152 Sum_probs=40.7
Q ss_pred CCHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE---CCeee-----------eccCCCHHHH
Q 030793 97 GDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL---NGKHE-----------LSGGQPPEVY 162 (171)
Q Consensus 97 ~~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv---~~~~~-----------i~G~~~~~~~ 162 (171)
.+.+.+.+++++.|++.. .+.+.. ..+. ..+|+.++|++++ +|+.. ..|..+.+.+
T Consensus 96 d~~~~~~~~~~~~~~~~~--~~~d~~---~~~~-----~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l 165 (196)
T 2ywi_A 96 DSPENMKKVAEELGYPFP--YLYDET---QEVA-----KAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESI 165 (196)
T ss_dssp GSHHHHHHHHHHHTCCSC--EEECSS---CHHH-----HHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHH
T ss_pred cCHHHHHHHHHHcCCCce--EEECCc---hHHH-----HHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHH
Confidence 457788888888888653 222311 1222 2478999998765 35532 2355677888
Q ss_pred HHHHHHHh
Q 030793 163 LRAFQVAA 170 (171)
Q Consensus 163 ~~~l~~~~ 170 (171)
.+.|+++.
T Consensus 166 ~~~i~~ll 173 (196)
T 2ywi_A 166 RAALDALL 173 (196)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888764
No 200
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=73.95 E-value=3.2 Score=28.13 Aligned_cols=36 Identities=17% Similarity=0.289 Sum_probs=26.7
Q ss_pred hhCCCCccc-------EEEEC--Cee--eeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVP-------HFVLN--GKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvP-------tfvv~--~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
..+|+.|+| +|+|+ |+. ...|..+.+.+.+.|+++.
T Consensus 121 ~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (171)
T 3cmi_A 121 QKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELL 167 (171)
T ss_dssp HSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred ccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHH
Confidence 358999999 67885 542 3457778888888888765
No 201
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=72.70 E-value=2.3 Score=27.69 Aligned_cols=32 Identities=9% Similarity=0.104 Sum_probs=21.0
Q ss_pred hhCCCCcccEEEE-C--CeeeeccCCCHHHHHHHHH
Q 030793 135 YSANISGVPHFVL-N--GKHELSGGQPPEVYLRAFQ 167 (171)
Q Consensus 135 ~~~gv~gvPtfvv-~--~~~~i~G~~~~~~~~~~l~ 167 (171)
..+||.++|++++ + |+. +....+.+.+++.|+
T Consensus 107 ~~~~v~~~P~~~lid~~G~i-~~~~~~~~~l~~~l~ 141 (142)
T 3eur_A 107 NLYDLRAIPTLYLLDKNKTV-LLKDATLQKVEQYLA 141 (142)
T ss_dssp TCSCCTTCSEEEEECTTCBE-EEEEECHHHHHHHHH
T ss_pred hhcCCCcCCeEEEECCCCcE-EecCCCHHHHHHHHh
Confidence 4689999999765 3 542 332336777777665
No 202
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=72.45 E-value=2.3 Score=27.96 Aligned_cols=61 Identities=25% Similarity=0.295 Sum_probs=36.5
Q ss_pred HHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCccc-EEEEC--Cee--eeccCC--CHHHHHHHHHHH
Q 030793 99 KEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVP-HFVLN--GKH--ELSGGQ--PPEVYLRAFQVA 169 (171)
Q Consensus 99 ~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvP-tfvv~--~~~--~i~G~~--~~~~~~~~l~~~ 169 (171)
.+.+.+++++.|++.. .+.+.. ..+. ..+|+.++| +|+|+ |+. .+.|.. +.+.+.+.|+++
T Consensus 74 ~~~~~~~~~~~~~~~~--~~~d~~---~~~~-----~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 74 KVAVEEFFRKTGFTLP--VLLDAD---KRVG-----KLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp HHHHHHHHHHHCCCCC--EEECTT---CHHH-----HHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC
T ss_pred hHHHHHHHHHcCCCee--EEecCc---hHHH-----HHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHH
Confidence 5667777777777643 222311 1121 357899999 66674 442 345765 456888887764
No 203
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=72.23 E-value=2.7 Score=26.86 Aligned_cols=33 Identities=15% Similarity=0.311 Sum_probs=21.6
Q ss_pred hCCCCcccEEEECC-eeeeccCC--CHHHHHHHHHH
Q 030793 136 SANISGVPHFVLNG-KHELSGGQ--PPEVYLRAFQV 168 (171)
Q Consensus 136 ~~gv~gvPtfvv~~-~~~i~G~~--~~~~~~~~l~~ 168 (171)
++||.|+||+++-+ ...+.|.. +.+.+.+.|++
T Consensus 87 ~~~i~~~Pt~~~~~~~~~~~g~~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 87 NLKVTAVPTLLKYGTPQKLVESECLQANLVEMLFSE 122 (123)
T ss_dssp HHCCCSSSEEEETTSSCEEEGGGGGCHHHHHHHHHC
T ss_pred HCCCCeeCEEEEEcCCceEeccccCCHHHHHHHHhc
Confidence 48999999999842 22344433 46677777653
No 204
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=71.80 E-value=6.2 Score=26.06 Aligned_cols=66 Identities=11% Similarity=0.141 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCccc----------------EEEEC--Cee--eeccCC
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVP----------------HFVLN--GKH--ELSGGQ 157 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvP----------------tfvv~--~~~--~i~G~~ 157 (171)
+.+.+.+.+++.|++.. .+... .+...+ + ...+|+.++| +|+|+ |+. ...|..
T Consensus 75 ~~~~~~~~~~~~~~~~~--~l~~~---~d~~~~-~-~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~ 147 (164)
T 2ggt_A 75 TKEAIANYVKEFSPKLV--GLTGT---REEVDQ-V-ARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNK 147 (164)
T ss_dssp CHHHHHHHHHTTCSSCE--EEECC---HHHHHH-H-HHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTC
T ss_pred CHHHHHHHHHHcCCCeE--EEeCC---HHHHHH-H-HHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCC
Confidence 36678888887777642 23221 111111 1 1368999999 67775 542 346777
Q ss_pred CHHHHHHHHHHHh
Q 030793 158 PPEVYLRAFQVAA 170 (171)
Q Consensus 158 ~~~~~~~~l~~~~ 170 (171)
+.+.+.+.|+++.
T Consensus 148 ~~~~l~~~l~~ll 160 (164)
T 2ggt_A 148 RKGEIAASIATHM 160 (164)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 8899998888764
No 205
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=70.79 E-value=4.2 Score=30.74 Aligned_cols=34 Identities=15% Similarity=0.202 Sum_probs=25.8
Q ss_pred hhCCCCcccEEEE--CCe-------------------eeeccCCCHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGK-------------------HELSGGQPPEVYLRAFQV 168 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~-------------------~~i~G~~~~~~~~~~l~~ 168 (171)
.++||.|+||+++ +|+ ....|..+.+.+.+.+.+
T Consensus 85 ~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~ 139 (298)
T 3ed3_A 85 AKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLS 139 (298)
T ss_dssp HHTTCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHT
T ss_pred HhCCCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHH
Confidence 3689999999987 454 234688888888887764
No 206
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=70.68 E-value=11 Score=25.03 Aligned_cols=72 Identities=14% Similarity=0.145 Sum_probs=39.5
Q ss_pred CHHHHHHHHH-HcCCchhHhhh---cCCCCChHHHHHHHHHhhCCC--Cccc----EEEEC--Cee--eeccCCCHHHHH
Q 030793 98 DKEFLVECAR-KVGVEGAAEFL---DDPNSGLNEVHEELKKYSANI--SGVP----HFVLN--GKH--ELSGGQPPEVYL 163 (171)
Q Consensus 98 ~~~~L~~ia~-~~Gld~~~~~~---~~~~~~~~~v~~~~~~~~~gv--~gvP----tfvv~--~~~--~i~G~~~~~~~~ 163 (171)
+.+.+.++++ ..|++-. .+ +........+-..+.....|+ .++| +|+|+ |+. ...|..+.+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~ 160 (170)
T 2p5q_A 83 TNDQITDFVCTRFKSEFP--IFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLE 160 (170)
T ss_dssp CHHHHHHHHHHHTCCCSC--BBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGH
T ss_pred CHHHHHHHHHHhcCCCce--eEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHH
Confidence 5677777777 5676542 11 111111111222222123466 7889 67775 542 346777888899
Q ss_pred HHHHHHhC
Q 030793 164 RAFQVAAN 171 (171)
Q Consensus 164 ~~l~~~~~ 171 (171)
+.|+++.+
T Consensus 161 ~~i~~ll~ 168 (170)
T 2p5q_A 161 RDIKQLLE 168 (170)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhh
Confidence 88887653
No 207
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=70.28 E-value=4.8 Score=31.24 Aligned_cols=35 Identities=6% Similarity=0.079 Sum_probs=27.0
Q ss_pred hhCCCCcccEEEE--CCee-eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH-ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~-~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. ...|..+.+.+.+.|.+.
T Consensus 85 ~~~~V~~~PTl~~f~~G~~~~y~G~~~~~~i~~~i~~~ 122 (367)
T 3us3_A 85 KKLGLTEEDSIYVFKEDEVIEYDGEFSADTLVEFLLDV 122 (367)
T ss_dssp HHHTCCSTTEEEEEETTEEEECCSCCSHHHHHHHHHHH
T ss_pred HHcCCCcCceEEEEECCcEEEeCCCCCHHHHHHHHHHh
Confidence 3689999999976 5653 346888999998887764
No 208
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=68.83 E-value=4.9 Score=29.27 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=21.9
Q ss_pred hhCCCCcccEEEEC-CeeeeccCCCHHHHHHHHH
Q 030793 135 YSANISGVPHFVLN-GKHELSGGQPPEVYLRAFQ 167 (171)
Q Consensus 135 ~~~gv~gvPtfvv~-~~~~i~G~~~~~~~~~~l~ 167 (171)
.++||.++|||++- |...+.|..+.+.+...+.
T Consensus 80 ~~~gv~~~Pt~~i~~g~~~~~G~~~~~~l~~fv~ 113 (243)
T 2hls_A 80 SEFKVERVPTVAFLGGEVRWTGIPAGEEIRALVE 113 (243)
T ss_dssp HHTTCCSSSEEEETTTTEEEESCCCTTHHHHHHH
T ss_pred HhcCCCcCCEEEEECCceeEcCCCcHHHHHHHHH
Confidence 46999999999884 4224567766555555444
No 209
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=68.35 E-value=2.9 Score=30.12 Aligned_cols=34 Identities=6% Similarity=0.010 Sum_probs=24.3
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCH-------HHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPP-------EVYLRAFQV 168 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~-------~~~~~~l~~ 168 (171)
.+++|.|+||+++ +|+. .+.|..+. +.|.+.|.+
T Consensus 166 ~~~~i~~~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~ 210 (217)
T 2trc_P 166 DRFSSDVLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNE 210 (217)
T ss_dssp TTSCGGGCSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHT
T ss_pred HHCCCCCCCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHH
Confidence 4689999999876 5653 24676653 778777764
No 210
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=68.08 E-value=5.8 Score=32.00 Aligned_cols=34 Identities=24% Similarity=0.376 Sum_probs=26.4
Q ss_pred hCCCCcccEEEE--CCe----eeeccCCCHHHHHHHHHHH
Q 030793 136 SANISGVPHFVL--NGK----HELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~----~~i~G~~~~~~~~~~l~~~ 169 (171)
.++|.|+||+++ +|+ ....|..+.+.|.+.|++.
T Consensus 426 ~~~v~~~Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~ 465 (504)
T 2b5e_A 426 GVVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKEN 465 (504)
T ss_dssp SCCCSSSSEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHH
T ss_pred cCCceecCeEEEEeCCceecceEecCCCCHHHHHHHHHhc
Confidence 379999999987 453 2346888999999988765
No 211
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=67.62 E-value=6.5 Score=31.45 Aligned_cols=35 Identities=14% Similarity=0.354 Sum_probs=27.5
Q ss_pred hhCCCCcccEEEE--CCee--eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. ...|..+.+.+.+.|.+.
T Consensus 69 ~~~~v~~~Ptl~~~~~g~~~~~~~G~~~~~~l~~~~~~~ 107 (481)
T 3f8u_A 69 NKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQ 107 (481)
T ss_dssp HHTTCCEESEEEEEETTEEEEECCSCSSHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEEeCCceeeeecCccCHHHHHHHHHhh
Confidence 4689999999987 5642 357888999998888764
No 212
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=67.58 E-value=3 Score=29.07 Aligned_cols=11 Identities=18% Similarity=0.296 Sum_probs=9.9
Q ss_pred CCCCcccEEEE
Q 030793 137 ANISGVPHFVL 147 (171)
Q Consensus 137 ~gv~gvPtfvv 147 (171)
.|+.|+||+++
T Consensus 100 ~gv~g~Pt~v~ 110 (173)
T 3ira_A 100 LGRGGWPLNII 110 (173)
T ss_dssp HSCCCSSEEEE
T ss_pred cCCCCCcceee
Confidence 59999999986
No 213
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=66.64 E-value=6.5 Score=31.43 Aligned_cols=34 Identities=18% Similarity=0.399 Sum_probs=26.6
Q ss_pred hCCCCcccEEEE--CCe----eeeccCCCHHHHHHHHHHH
Q 030793 136 SANISGVPHFVL--NGK----HELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 136 ~~gv~gvPtfvv--~~~----~~i~G~~~~~~~~~~l~~~ 169 (171)
.++|.|+||+++ +|+ ....|..+.+.|.+.|++.
T Consensus 420 ~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 459 (481)
T 3f8u_A 420 PYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQRE 459 (481)
T ss_dssp TCCCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHH
T ss_pred hCCCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHh
Confidence 589999999987 232 2357889999999988764
No 214
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=66.40 E-value=6.2 Score=30.75 Aligned_cols=63 Identities=13% Similarity=-0.030 Sum_probs=41.3
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEE-EC--Cee--eeccCCCHHHHHHHHHHHh
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFV-LN--GKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfv-v~--~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
+.+.+.+++++.|++.. .+.+.. ..+. ..+||.++|+++ |+ |+. ...|..+.+.+.+.|+++.
T Consensus 131 ~~~~~~~~~~~~~l~fp--v~~D~~---~~l~-----~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 131 VPGNVAKGAANLGISYP--IALDNN---YATW-----TNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp CHHHHHHHHHHHTCCSC--EEECTT---SHHH-----HHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCcc--EEeCCc---HHHH-----HHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 57788888888888743 222211 1121 358999999955 53 442 3468888999988887754
No 215
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=64.53 E-value=10 Score=27.23 Aligned_cols=34 Identities=18% Similarity=0.214 Sum_probs=23.6
Q ss_pred hhCCCCcccEEEE-CC-------ee-eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL-NG-------KH-ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv-~~-------~~-~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ .+ .. .+.| .+.+.+.+.|.+.
T Consensus 83 ~~~~v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~ 125 (244)
T 3q6o_A 83 RDFNIPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDA 125 (244)
T ss_dssp HHTTCCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHH
T ss_pred HHcCCCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHH
Confidence 3689999999976 21 11 2345 5888888887764
No 216
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=64.06 E-value=9 Score=30.87 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=27.3
Q ss_pred hhCCCCcccEEEE--CCee----eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH----ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~----~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. ...|..+.+.+.+.|.+.
T Consensus 80 ~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~ 120 (504)
T 2b5e_A 80 MEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQ 120 (504)
T ss_dssp HHTTCCSSSEEEEEETTCTTCEEECCSCCSHHHHHHHHHHH
T ss_pred HhcCCCcCCEEEEEeCCccccceeecCCCCHHHHHHHHHHh
Confidence 4699999999987 5552 357888999999888764
No 217
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=63.62 E-value=9.9 Score=25.26 Aligned_cols=27 Identities=15% Similarity=0.180 Sum_probs=18.2
Q ss_pred EEEEC--Cee--eeccCCCHHHHHHHHHHHh
Q 030793 144 HFVLN--GKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 144 tfvv~--~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
+|+|+ |+. ...|..+.+.+.+.|+++.
T Consensus 133 ~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 163 (171)
T 2rli_A 133 IYLLNPDGLFTDYYGRSRSAEQISDSVRRHM 163 (171)
T ss_dssp EEEECTTSCEEEEEESSCCHHHHHHHHHHHH
T ss_pred EEEECCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 46675 542 3467778888888887654
No 218
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=62.07 E-value=5.1 Score=30.72 Aligned_cols=35 Identities=9% Similarity=0.116 Sum_probs=26.7
Q ss_pred hhCCCCcccEEEE--CCee-eeccCCCHHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH-ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~-~i~G~~~~~~~~~~l~~~ 169 (171)
.++||.|+||+++ +|+. ...|..+.+.+.+.|.+.
T Consensus 83 ~~~~v~~~Pt~~~~~~g~~~~~~G~~~~~~l~~~i~~~ 120 (350)
T 1sji_A 83 KKLGFDEEGSLYVLKGDRTIEFDGEFAADVLVEFLLDL 120 (350)
T ss_dssp HHHTCCSTTEEEEEETTEEEEECSCCCHHHHHHHHHTT
T ss_pred HhcCCCccceEEEEECCcEEEecCCCCHHHHHHHHHHh
Confidence 3689999999987 5652 357888999988877653
No 219
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=61.82 E-value=4.1 Score=27.25 Aligned_cols=33 Identities=9% Similarity=0.092 Sum_probs=22.9
Q ss_pred CCCCcccEEEE--CCee--eeccCC--CHHHHHHHHHHH
Q 030793 137 ANISGVPHFVL--NGKH--ELSGGQ--PPEVYLRAFQVA 169 (171)
Q Consensus 137 ~gv~gvPtfvv--~~~~--~i~G~~--~~~~~~~~l~~~ 169 (171)
+++.++|++++ +|+. ...|.. +.+.+.+.|+++
T Consensus 133 ~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 133 YLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp EEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred ceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 56789999765 4552 235666 788888888764
No 220
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=61.76 E-value=4.4 Score=26.31 Aligned_cols=64 Identities=11% Similarity=0.163 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccE-EEEC--CeeeeccCCCHHHHHHHHHH
Q 030793 98 DKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPH-FVLN--GKHELSGGQPPEVYLRAFQV 168 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPt-fvv~--~~~~i~G~~~~~~~~~~l~~ 168 (171)
+.+.+.+.+++.|++... .+.+.......+ ...+||.++|+ |+|+ |+. +.-..+.+.+.+.|++
T Consensus 76 ~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~-----~~~~~v~~~P~~~lid~~G~i-~~~~~~~~~l~~~l~~ 142 (143)
T 4fo5_A 76 KESIFTETVKIDKLDLST-QFHEGLGKESEL-----YKKYDLRKGFKNFLINDEGVI-IAANVTPEKLTEILKA 142 (143)
T ss_dssp CHHHHHHHHHHHTCCGGG-EEECTTGGGSHH-----HHHTTGGGCCCEEEECTTSBE-EEESCCHHHHHHHHTC
T ss_pred CHHHHHHHHHHhCCCCce-eeecccccchHH-----HHHcCCCCCCcEEEECCCCEE-EEccCCHHHHHHHHHh
Confidence 466777888888887521 122211111111 13589999995 4565 552 3323467777777654
No 221
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=60.49 E-value=10 Score=31.15 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=26.2
Q ss_pred hhCCCCcccEEEE-C-----Ce--eeeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL-N-----GK--HELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv-~-----~~--~~i~G~~~~~~~~~~l~~~~ 170 (171)
.++||.|+||+++ + |+ ....|..+.+.+.+.|.+..
T Consensus 83 ~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l 126 (519)
T 3t58_A 83 REFNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDAL 126 (519)
T ss_dssp HHTTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHH
T ss_pred HHcCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHH
Confidence 3699999999986 2 11 22357788999998887654
No 222
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=59.94 E-value=13 Score=27.34 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=26.4
Q ss_pred hhCCCC--cccEEEE-CCe----eee--ccCCCHHHHHHHHHHH
Q 030793 135 YSANIS--GVPHFVL-NGK----HEL--SGGQPPEVYLRAFQVA 169 (171)
Q Consensus 135 ~~~gv~--gvPtfvv-~~~----~~i--~G~~~~~~~~~~l~~~ 169 (171)
.++||. |+|||++ .|+ ..+ .|..+.+.|.+.|.+.
T Consensus 87 ~~~~V~~~~~PTl~~F~G~~~~~~~y~~~G~~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 87 DRYKVDDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSAN 130 (248)
T ss_dssp HHTTCCTTSCCEEEEESSSSSSEEECCTTSCCCHHHHHHHHHHH
T ss_pred HHhCCCcCCCCeEEEEeCCcCcceeecccCCCCHHHHHHHHHHh
Confidence 369999 9999976 233 234 6889999999888764
No 223
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=58.29 E-value=6.5 Score=25.42 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=22.6
Q ss_pred hhCCCCc-ccEEEE--CCeee---eccCCCHHHHHHHH
Q 030793 135 YSANISG-VPHFVL--NGKHE---LSGGQPPEVYLRAF 166 (171)
Q Consensus 135 ~~~gv~g-vPtfvv--~~~~~---i~G~~~~~~~~~~l 166 (171)
.++||.+ .|||++ ||+.. -.|.-+.+.+.+++
T Consensus 74 ~~~~V~h~sPq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 74 KKTNVKHESPQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp HHHTCCCCSSEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred HHhCCccCCCeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 3799995 999987 67622 24677777777654
No 224
>2ko6_A Uncharacterized protein YIHD; alpha protein, structural genomics, PSI-2, protein structure initiative; NMR {Shigella flexneri}
Probab=57.60 E-value=10 Score=23.04 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 79 HNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 79 ~~~~~~l~~a~~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
.++.+ |.+-+|....+++-.+.|..+|.++|++..
T Consensus 7 nEliE-LL~p~W~k~~dLnL~q~Lqkla~Eagf~g~ 41 (89)
T 2ko6_A 7 NEVIE-LLQPAWQKEPDFNLLQFLQKLAKESGFDGE 41 (89)
T ss_dssp HHHHH-HTHHHHHSSTTSCHHHHHHHHHHHTTCSSC
T ss_pred HHHHH-HhcHHhhcCCCccHHHHHHHHHHHhCCCCc
Confidence 34443 667789999999999999999999999875
No 225
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=57.04 E-value=4.5 Score=26.62 Aligned_cols=22 Identities=23% Similarity=0.431 Sum_probs=16.6
Q ss_pred CCCCcccEEEECCeeeeccCCCH
Q 030793 137 ANISGVPHFVLNGKHELSGGQPP 159 (171)
Q Consensus 137 ~gv~gvPtfvv~~~~~i~G~~~~ 159 (171)
.|...||.++|+|+ .|.|..+.
T Consensus 66 ~G~~tVP~IfI~G~-~IGG~ddl 87 (127)
T 3l4n_A 66 TGRGTVPNLLVNGV-SRGGNEEI 87 (127)
T ss_dssp HSCCSSCEEEETTE-ECCCHHHH
T ss_pred cCCCCcceEEECCE-EEcCHHHH
Confidence 57889999999998 46664433
No 226
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=56.11 E-value=16 Score=24.57 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=21.9
Q ss_pred CCCcccEEEE---CCee--eeccC----------CCHHHHHHHHHHHh
Q 030793 138 NISGVPHFVL---NGKH--ELSGG----------QPPEVYLRAFQVAA 170 (171)
Q Consensus 138 gv~gvPtfvv---~~~~--~i~G~----------~~~~~~~~~l~~~~ 170 (171)
++.++||+++ +|+. .+.|. .+.+.|.+.|+++.
T Consensus 100 ~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 100 DGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp TCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred cCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 3377999975 3542 24564 67888888887653
No 227
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=55.03 E-value=9.5 Score=27.40 Aligned_cols=20 Identities=25% Similarity=0.576 Sum_probs=16.1
Q ss_pred hCCCCcccEEEECCeeeeccC
Q 030793 136 SANISGVPHFVLNGKHELSGG 156 (171)
Q Consensus 136 ~~gv~gvPtfvv~~~~~i~G~ 156 (171)
..|..++|+++++|+ .+.|.
T Consensus 214 ~~g~~~vP~~~~~g~-~i~g~ 233 (241)
T 1nm3_A 214 VSGRTTVPQVFIGGK-HIGGS 233 (241)
T ss_dssp HTCCSSSCEEEETTE-EEESH
T ss_pred HhCCCCcCEEEECCE-EEECH
Confidence 478899999999998 46553
No 228
>1wi3_A DNA-binding protein SATB2; homeodomain, helix-turn-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=54.60 E-value=21 Score=21.01 Aligned_cols=30 Identities=13% Similarity=0.326 Sum_probs=23.6
Q ss_pred HHHHHHhhc-CCCCCCHHHHHHHHHHcCCchh
Q 030793 84 ELFLGYFTQ-GKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 84 ~l~~a~~~~-g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
.+++.+|.. +..+ |.+....+++.+||+..
T Consensus 20 ~~Lqs~f~~~~~yP-d~~~r~~La~~tGL~~~ 50 (71)
T 1wi3_A 20 GILQSFIHDVGLYP-DQEAIHTLSAQLDLPKH 50 (71)
T ss_dssp HHHHHHHHHHCSCC-CHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHhcCCCC-CHHHHHHHHHHhCCCHH
Confidence 456666777 7765 78889999999999975
No 229
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=53.66 E-value=10 Score=26.83 Aligned_cols=64 Identities=16% Similarity=0.142 Sum_probs=39.8
Q ss_pred CCHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE-C--CeeeeccC-----------CCHHHH
Q 030793 97 GDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL-N--GKHELSGG-----------QPPEVY 162 (171)
Q Consensus 97 ~~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv-~--~~~~i~G~-----------~~~~~~ 162 (171)
.+.+.+.+++++.|++.. .+.+.. ..+. ..+|+.++|++++ + |+....|. .+.+.+
T Consensus 109 d~~~~~~~~~~~~~~~~~--~l~D~~---~~~~-----~~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l 178 (218)
T 3u5r_E 109 ETLERVGAEVKAYGYGFP--YLKDAS---QSVA-----KAYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADL 178 (218)
T ss_dssp GSHHHHHHHHHHHTCCSC--EEECTT---CHHH-----HHHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHH
T ss_pred CCHHHHHHHHHHhCCCcc--EEECCc---cHHH-----HHcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHH
Confidence 467788888888888643 232211 1222 3578999999765 3 55333332 346788
Q ss_pred HHHHHHHh
Q 030793 163 LRAFQVAA 170 (171)
Q Consensus 163 ~~~l~~~~ 170 (171)
.++|+++.
T Consensus 179 ~~~i~~ll 186 (218)
T 3u5r_E 179 RAAVDAVL 186 (218)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888764
No 230
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=50.59 E-value=22 Score=24.26 Aligned_cols=34 Identities=12% Similarity=0.170 Sum_probs=23.4
Q ss_pred CCCCccc----EEEEC--Cee--eeccCCCHHHHHHHHHHHh
Q 030793 137 ANISGVP----HFVLN--GKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 137 ~gv~gvP----tfvv~--~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
.|+.++| +|+|+ |+. ...|..+.+.+.+.|+++.
T Consensus 141 ~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL 182 (187)
T 3dwv_A 141 LATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLL 182 (187)
T ss_dssp BSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC
T ss_pred cCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 4555666 56775 542 3467788999999988765
No 231
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=50.00 E-value=30 Score=22.83 Aligned_cols=70 Identities=16% Similarity=0.207 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHcCCchhH-hhhcCCCCChHHHHHHHHH-----------hhCCCCcccE-EEEC--Cee--eeccCC--C
Q 030793 98 DKEFLVECARKVGVEGAA-EFLDDPNSGLNEVHEELKK-----------YSANISGVPH-FVLN--GKH--ELSGGQ--P 158 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~-~~~~~~~~~~~~v~~~~~~-----------~~~gv~gvPt-fvv~--~~~--~i~G~~--~ 158 (171)
+.+.+.+++++.|++... ..+.+.+ ..+...+.. ...++.++|+ |+|+ |+. ...|.. +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~l~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~ 159 (174)
T 1xzo_A 83 KPKQLKKFAANYPLSFDNWDFLTGYS---QSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTP 159 (174)
T ss_dssp CHHHHHHHHTTSCCCGGGEEEEBCSC---HHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCC
T ss_pred CHHHHHHHHHHcCCCCcceEEEeCCC---HHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCC
Confidence 567788888888876421 1233311 222222211 1257889996 6775 542 235665 5
Q ss_pred HHHHHHHHHHHh
Q 030793 159 PEVYLRAFQVAA 170 (171)
Q Consensus 159 ~~~~~~~l~~~~ 170 (171)
.+.+.+.|+++.
T Consensus 160 ~~~l~~~l~~ll 171 (174)
T 1xzo_A 160 YDDIISDVKSAS 171 (174)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 788999988765
No 232
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=49.97 E-value=30 Score=22.36 Aligned_cols=52 Identities=33% Similarity=0.463 Sum_probs=30.1
Q ss_pred HHHHHHHHcCCc-hh-HhhhcCCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCCCH
Q 030793 101 FLVECARKVGVE-GA-AEFLDDPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQPP 159 (171)
Q Consensus 101 ~L~~ia~~~Gld-~~-~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~~~ 159 (171)
...++....|+. -. ....++ .++++.+... .|-.-||.++|+|+ .|-|..+.
T Consensus 40 ~ak~lL~~~gv~~~~~~~v~~~-----~~~r~~l~~~-sg~~TvPqIFI~g~-~IGG~Ddl 93 (118)
T 2wul_A 40 AVVQILRLHGVRDYAAYNVLDD-----PELRQGIKDY-SNWPTIPQVYLNGE-FVGGCDIL 93 (118)
T ss_dssp HHHHHHHHTTCCSCEEEETTSC-----HHHHHHHHHH-HTCCSSCEEEETTE-EEECHHHH
T ss_pred HHHHHHHHhCCcCeEeecccCC-----HHHHHHHHHh-ccCCCCCeEeECCE-EECCHHHH
Confidence 344566667773 23 223322 4566655542 24467999999998 47665443
No 233
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.38 E-value=22 Score=24.65 Aligned_cols=36 Identities=11% Similarity=0.242 Sum_probs=27.2
Q ss_pred hhCCCCcccEEEEC----Ce----eeeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVLN----GK----HELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv~----~~----~~i~G~~~~~~~~~~l~~~~ 170 (171)
..+++.++|++.+= ++ ..+.|..+.++|...|..+.
T Consensus 124 ~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 124 RTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp HHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred hhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 35899999999763 21 13689999999999887653
No 234
>2l8n_A Transcriptional repressor CYTR; bacterial gene repressor, helix turn helix binding domain, L family, transcription regulation, binding protein; NMR {Escherichia coli} PDB: 2lcv_A
Probab=49.30 E-value=25 Score=20.11 Aligned_cols=39 Identities=18% Similarity=0.197 Sum_probs=25.4
Q ss_pred HHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHHH--hhCCC
Q 030793 101 FLVECARKVGVEGA--AEFLDDPNSGLNEVHEELKK--YSANI 139 (171)
Q Consensus 101 ~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~~--~~~gv 139 (171)
.+.++|+.+|++.. ..++++......+..+.+.. .++|.
T Consensus 11 t~~diA~~aGVS~sTVSr~ln~~~~vs~~t~~rV~~~a~~lgY 53 (67)
T 2l8n_A 11 TMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGY 53 (67)
T ss_dssp CHHHHHHHTTCCHHHHHHTTTCCCCSCHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHCCCHHHHHHHHcCCCCCCHHHHHHHHHHHHHhCC
Confidence 48899999999986 46776643455666655442 34554
No 235
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=49.24 E-value=11 Score=28.73 Aligned_cols=33 Identities=6% Similarity=0.274 Sum_probs=25.5
Q ss_pred hCCCCcccEEEEC--C--e--eeeccCCCHHHHHHHHHH
Q 030793 136 SANISGVPHFVLN--G--K--HELSGGQPPEVYLRAFQV 168 (171)
Q Consensus 136 ~~gv~gvPtfvv~--~--~--~~i~G~~~~~~~~~~l~~ 168 (171)
+++|.|+||+++- | + ....|..+.+.|.+.|++
T Consensus 316 ~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~ 354 (361)
T 3uem_A 316 AVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLES 354 (361)
T ss_dssp SCCCCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTT
T ss_pred hcCCcccCeEEEEECCCCcceeEecCCCCHHHHHHHHHh
Confidence 5799999999763 3 2 345788899999988764
No 236
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=48.87 E-value=12 Score=32.10 Aligned_cols=34 Identities=12% Similarity=0.230 Sum_probs=19.6
Q ss_pred hhCCCCcccEEEE--CCe--eeeccCCCHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGK--HELSGGQPPEVYLRAFQV 168 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~--~~i~G~~~~~~~~~~l~~ 168 (171)
.++||.|+||+++ +|+ ....|..+.+.+.+.|.+
T Consensus 181 ~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~ 218 (780)
T 3apo_A 181 RMKGVNSYPSLFIFRSGMAAVKYNGDRSKESLVAFAMQ 218 (780)
T ss_dssp --------CEEEEECTTSCCEECCSCSCHHHHHHHHHT
T ss_pred HHcCCceeeeEEEEeCCcEeeEecCCCCHHHHHHHHHH
Confidence 4689999999987 454 245788898888887764
No 237
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=47.92 E-value=17 Score=23.80 Aligned_cols=29 Identities=14% Similarity=0.187 Sum_probs=18.8
Q ss_pred hCCCCcccEEEE---CCee--eeccCCCHHHHHH
Q 030793 136 SANISGVPHFVL---NGKH--ELSGGQPPEVYLR 164 (171)
Q Consensus 136 ~~gv~gvPtfvv---~~~~--~i~G~~~~~~~~~ 164 (171)
.+|+.++|++++ +|+. ...|..+.+....
T Consensus 108 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~e~~~~ 141 (152)
T 2lrt_A 108 LYNVTNLPSVFLVNRNNELSARGENIKDLDEAIK 141 (152)
T ss_dssp HHTCCSCSEEEEEETTTEEEEETTTCSCHHHHHH
T ss_pred HcCcccCceEEEECCCCeEEEecCCHHHHHHHHH
Confidence 578999998765 3552 2357666655444
No 238
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=47.20 E-value=56 Score=21.23 Aligned_cols=71 Identities=14% Similarity=0.084 Sum_probs=36.3
Q ss_pred CHHHHHHH-HHHcCCchhHhhh---cCCCCChHHHHHHHHHhhCCCC-----ccc-EEEEC--Cee--eeccCCCHHHHH
Q 030793 98 DKEFLVEC-ARKVGVEGAAEFL---DDPNSGLNEVHEELKKYSANIS-----GVP-HFVLN--GKH--ELSGGQPPEVYL 163 (171)
Q Consensus 98 ~~~~L~~i-a~~~Gld~~~~~~---~~~~~~~~~v~~~~~~~~~gv~-----gvP-tfvv~--~~~--~i~G~~~~~~~~ 163 (171)
+.+.+.++ .++.|++-. .+ +........+-.-+.....|+. ++| +|+|+ |+. ...|..+.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~ 159 (169)
T 2v1m_A 82 AEAEIKKFVTEKYGVQFD--MFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIE 159 (169)
T ss_dssp CHHHHHHHHHHHHCCCSE--EBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGH
T ss_pred CHHHHHHHHHHhcCCCCc--eEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHH
Confidence 46677777 477777643 11 1111111111111222234544 456 55664 542 345777788888
Q ss_pred HHHHHHh
Q 030793 164 RAFQVAA 170 (171)
Q Consensus 164 ~~l~~~~ 170 (171)
+.|+++.
T Consensus 160 ~~i~~ll 166 (169)
T 2v1m_A 160 GDIMELL 166 (169)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8887764
No 239
>1uxc_A FRUR (1-57), fructose repressor; DNA-binding protein, LACI family, transc regulation; NMR {Escherichia coli} SCOP: a.35.1.5 PDB: 1uxd_A
Probab=46.20 E-value=20 Score=20.41 Aligned_cols=31 Identities=23% Similarity=0.256 Sum_probs=17.7
Q ss_pred HHHHHHHcCCchh--HhhhcCCC---CChHHHHHHH
Q 030793 102 LVECARKVGVEGA--AEFLDDPN---SGLNEVHEEL 132 (171)
Q Consensus 102 L~~ia~~~Gld~~--~~~~~~~~---~~~~~v~~~~ 132 (171)
+.++|+.+|++.. ..++++.. ....+..+.+
T Consensus 3 ~~diA~~aGVS~sTVSrvLng~~~~~~vs~et~~rI 38 (65)
T 1uxc_A 3 LDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKV 38 (65)
T ss_dssp HHHHHHHHTSCHHHHHHHHHTCTTTTTCTTHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 5677777788765 35555532 3444554443
No 240
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=44.74 E-value=28 Score=23.44 Aligned_cols=67 Identities=21% Similarity=0.337 Sum_probs=37.6
Q ss_pred HHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCcccEEEE-C--Cee--eeccCCC--HHHHHHHHHHHh
Q 030793 99 KEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISGVPHFVL-N--GKH--ELSGGQP--PEVYLRAFQVAA 170 (171)
Q Consensus 99 ~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~gvPtfvv-~--~~~--~i~G~~~--~~~~~~~l~~~~ 170 (171)
.+.+.+++++.|++.- ..+.++. ..+.+.+.. ..++.|+|++++ + |+. ...|..+ .+.+.+.|+++.
T Consensus 106 ~~~~~~~~~~~~~~~~-~~~~d~~---~~~~~~~~~-~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll 179 (186)
T 1jfu_A 106 PEKPKTFLKEANLTRL-GYFNDQK---AKVFQDLKA-IGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAAT 179 (186)
T ss_dssp TTHHHHHHHHTTCCTT-CCEECTT---CHHHHHHHT-TTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCC-ceEECCc---chHHHHhcc-ccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHh
Confidence 4677888888887522 1233321 233333221 234569998754 3 542 3457654 577888887764
No 241
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=43.05 E-value=27 Score=29.78 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=27.4
Q ss_pred hhCCCCcccEEEE--CCe-eeeccCCCHHHHHHHHHHHh
Q 030793 135 YSANISGVPHFVL--NGK-HELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~-~~i~G~~~~~~~~~~l~~~~ 170 (171)
..+||.|+||+++ +|+ +...|..+.+.+.+.++...
T Consensus 503 ~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~~l~~fi~~~~ 541 (780)
T 3apo_A 503 NMYNIQAYPTTVVFNQSSIHEYEGHHSAEQILEFIEDLR 541 (780)
T ss_dssp HHTTCCSSSEEEEEETTEEEEECSCSCHHHHHHHHHHHH
T ss_pred HHcCCCcCCeEEEEcCCceeeecCcccHHHHHHHHHhhc
Confidence 3699999999986 343 45578888888888887653
No 242
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=42.28 E-value=25 Score=22.96 Aligned_cols=33 Identities=15% Similarity=0.399 Sum_probs=20.0
Q ss_pred hhCCCCcccE-EEEC--Ce--eeeccCCC--HHHHHHHHH
Q 030793 135 YSANISGVPH-FVLN--GK--HELSGGQP--PEVYLRAFQ 167 (171)
Q Consensus 135 ~~~gv~gvPt-fvv~--~~--~~i~G~~~--~~~~~~~l~ 167 (171)
..+||.++|+ |+++ |+ +...|..+ .+.+.+.+.
T Consensus 109 ~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~ 148 (158)
T 3hdc_A 109 QRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLK 148 (158)
T ss_dssp HHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred HHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHH
Confidence 3689999999 5664 44 23467654 344555443
No 243
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=40.22 E-value=13 Score=26.04 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=23.0
Q ss_pred hhCCCCcccEEEE--CCe----------------eee-cc-CCCHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGK----------------HEL-SG-GQPPEVYLRAFQV 168 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~----------------~~i-~G-~~~~~~~~~~l~~ 168 (171)
.++||.|+||+++ +|. |.+ .| ..+.+.|.+-|.+
T Consensus 97 ~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~ 150 (178)
T 3ga4_A 97 KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAK 150 (178)
T ss_dssp HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHH
Confidence 4699999999987 231 222 24 6677778777654
No 244
>1p4q_A CBP/P300-interacting transactivator 2; helix, protein-protein complex, transcription/transferase complex; NMR {Homo sapiens} SCOP: j.96.1.1
Probab=38.50 E-value=15 Score=19.78 Aligned_cols=21 Identities=19% Similarity=0.279 Sum_probs=18.1
Q ss_pred CCCCCHHHHHHHHHHcCCchh
Q 030793 94 KYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 94 ~~i~~~~~L~~ia~~~Gld~~ 114 (171)
.++-|+++|..+..++|+|+.
T Consensus 13 ~dliDEevLtsLv~ELGLdRv 33 (52)
T 1p4q_A 13 TDFIDEEVLMSLVIEMGLDRI 33 (52)
T ss_dssp CSSSCTTHHHHHHHHHTSSSC
T ss_pred cccccHHHHHHHHHHHhhHHH
Confidence 356789999999999999975
No 245
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=38.32 E-value=12 Score=25.48 Aligned_cols=66 Identities=11% Similarity=0.105 Sum_probs=38.4
Q ss_pred CHHHHHHHHHH-cCCchhHhhhc---CCCCChHHHHHHHHHhhCCCCccc--------EEEEC--Cee--eeccCCCHHH
Q 030793 98 DKEFLVECARK-VGVEGAAEFLD---DPNSGLNEVHEELKKYSANISGVP--------HFVLN--GKH--ELSGGQPPEV 161 (171)
Q Consensus 98 ~~~~L~~ia~~-~Gld~~~~~~~---~~~~~~~~v~~~~~~~~~gv~gvP--------tfvv~--~~~--~i~G~~~~~~ 161 (171)
+.+.+.+++++ .|++-. .+. ........+ ...++.++| +|+|+ |+. ...|..+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~p--~~~~~d~~g~~~~~~------~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~ 171 (181)
T 2p31_A 100 SNKEIESFARRTYSVSFP--MFSKIAVTGTGAHPA------FKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEE 171 (181)
T ss_dssp CHHHHHHHHHHHHCCCSC--BBCCCCCSSTTSCHH------HHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHH
T ss_pred CHHHHHHHHHhhcCCCce--eEeecccCCccchhh------hhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHH
Confidence 57788888888 787643 221 100010101 112345677 78885 542 3467778899
Q ss_pred HHHHHHHHhC
Q 030793 162 YLRAFQVAAN 171 (171)
Q Consensus 162 ~~~~l~~~~~ 171 (171)
+.+.|+++.+
T Consensus 172 l~~~i~~ll~ 181 (181)
T 2p31_A 172 VRPQITALVR 181 (181)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHHHhC
Confidence 9999887653
No 246
>1r8u_A CBP/P300-interacting transactivator 2; zinc-binding motifs, protein-protein complex, TAZ zinc finger, transcription/transcription activator complex; NMR {Homo sapiens} SCOP: j.96.1.1
Probab=38.12 E-value=24 Score=18.83 Aligned_cols=20 Identities=20% Similarity=0.292 Sum_probs=17.2
Q ss_pred CCCCHHHHHHHHHHcCCchh
Q 030793 95 YIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 95 ~i~~~~~L~~ia~~~Gld~~ 114 (171)
++-|.++|..+..++|+|+.
T Consensus 2 dliDEevLtsLv~ELgLdRv 21 (50)
T 1r8u_A 2 DFIDEEVLMSLVIEMGLDRI 21 (50)
T ss_dssp CSCCHHHHHHHHHHHTGGGC
T ss_pred ccccHHHHHHHHHHHhhHHH
Confidence 45689999999999999974
No 247
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=37.38 E-value=40 Score=23.05 Aligned_cols=35 Identities=9% Similarity=0.048 Sum_probs=22.2
Q ss_pred hCCCC-----cccEEEE-C--Cee--eeccCC----CHHHHHHHHHHHh
Q 030793 136 SANIS-----GVPHFVL-N--GKH--ELSGGQ----PPEVYLRAFQVAA 170 (171)
Q Consensus 136 ~~gv~-----gvPtfvv-~--~~~--~i~G~~----~~~~~~~~l~~~~ 170 (171)
.+|+. ++|++++ + |+. ...|.. +.+.+.+.|+++.
T Consensus 121 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 121 AAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp HHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 35666 8998765 3 442 233543 6788888888754
No 248
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=33.07 E-value=49 Score=17.81 Aligned_cols=25 Identities=8% Similarity=0.120 Sum_probs=18.9
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|..|....+.+.+..++..+|++.+
T Consensus 38 ~e~g~~~~~~~~l~~i~~~l~~~~~ 62 (68)
T 2r1j_L 38 WERSETEPNGENLLALSKALQCSPD 62 (68)
T ss_dssp HHTTSSCCBHHHHHHHHHHTTSCHH
T ss_pred HHcCCCCCCHHHHHHHHHHhCCCHH
Confidence 4556655578889999999998865
No 249
>3sjr_A Uncharacterized protein; PSI-biology, MCSG, midwest center for structural genomics, U function, structural genomics; 2.94A {Chromobacterium violaceum}
Probab=32.77 E-value=51 Score=22.62 Aligned_cols=33 Identities=15% Similarity=-0.169 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHc
Q 030793 77 KQHNLAEELFLGYFTQGKYIGDKEFLVECARKV 109 (171)
Q Consensus 77 ~~~~~~~~l~~a~~~~g~~i~~~~~L~~ia~~~ 109 (171)
+...+...+|.+|-....+.+.++.|.+++.-.
T Consensus 96 RIVsfaT~FF~~yq~qhPd~~~ee~L~~Fm~lI 128 (175)
T 3sjr_A 96 HLLLGMEILMELYRQQHPDWTAPAIRQAFAPLA 128 (175)
T ss_dssp HHHHHHHHHHHHHHHTCSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 455677889999988888888888888877654
No 250
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=31.60 E-value=53 Score=21.50 Aligned_cols=43 Identities=16% Similarity=0.215 Sum_probs=26.7
Q ss_pred CCCHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCCc----ccE-EEEC
Q 030793 96 IGDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANISG----VPH-FVLN 148 (171)
Q Consensus 96 i~~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~g----vPt-fvv~ 148 (171)
..+.+.+.+++++.|++.. .+.+.+ ..+. ..+|+.| +|+ |+|+
T Consensus 71 ~d~~~~~~~~~~~~~~~~~--~~~d~~---~~~~-----~~~~v~~~~~~~P~~~lid 118 (161)
T 3drn_A 71 SDDINSHKRFKEKYKLPFI--LVSDPD---KKIR-----ELYGAKGFILPARITFVID 118 (161)
T ss_dssp SCCHHHHHHHHHHTTCCSE--EEECTT---SHHH-----HHTTCCCSSSCCCEEEEEC
T ss_pred CCCHHHHHHHHHHhCCCce--EEECCc---HHHH-----HHcCCCCcCcccceEEEEC
Confidence 3567888889888888743 233311 1221 3588889 995 4564
No 251
>3omt_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.65A {Cytophaga hutchinsonii}
Probab=31.23 E-value=58 Score=18.10 Aligned_cols=25 Identities=16% Similarity=0.158 Sum_probs=19.9
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|..|....+.+.+..++..+|++.+
T Consensus 41 ~e~g~~~~~~~~l~~ia~~l~v~~~ 65 (73)
T 3omt_A 41 WCTNDVQPSLETLFDIAEALNVDVR 65 (73)
T ss_dssp HHTTSSCCCHHHHHHHHHHHTSCGG
T ss_pred HHcCCCCCCHHHHHHHHHHHCcCHH
Confidence 4556655688899999999999876
No 252
>3bs3_A Putative DNA-binding protein; XRE-family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.65A {Bacteroides fragilis}
Probab=30.97 E-value=58 Score=18.06 Aligned_cols=25 Identities=20% Similarity=0.263 Sum_probs=19.5
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|..|....+.+.+..++..+|++.+
T Consensus 43 ~e~g~~~~~~~~l~~ia~~l~~~~~ 67 (76)
T 3bs3_A 43 WCSNKSQPSLDMLVKVAELLNVDPR 67 (76)
T ss_dssp HHTTSSCCCHHHHHHHHHHHTSCGG
T ss_pred HHcCCCCCCHHHHHHHHHHHCcCHH
Confidence 4556655678889999999999876
No 253
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=30.91 E-value=41 Score=25.43 Aligned_cols=42 Identities=14% Similarity=0.200 Sum_probs=28.5
Q ss_pred CHHHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHHH--hhCCC
Q 030793 98 DKEFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELKK--YSANI 139 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~~--~~~gv 139 (171)
....+.++|+.+|++.. ..+|+......++.++...+ .++|-
T Consensus 8 ~~~Ti~diA~~aGVS~~TVSrvLn~~~~Vs~~tr~rV~~~a~~lgY 53 (366)
T 3h5t_A 8 QYGTLASIAAKLGISRTTVSNAYNRPEQLSAELRQRILDTAEDMGY 53 (366)
T ss_dssp CTTHHHHHHHHHTSCHHHHHHHHHCGGGSCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHhCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHhCC
Confidence 34579999999999986 56776644466666665443 45553
No 254
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=30.62 E-value=39 Score=26.48 Aligned_cols=50 Identities=22% Similarity=0.322 Sum_probs=28.5
Q ss_pred HHHHcCCchh-Hhhhc--CCCCChHHHHHHHHHhhCCCCcccEEEECCeeeeccCC
Q 030793 105 CARKVGVEGA-AEFLD--DPNSGLNEVHEELKKYSANISGVPHFVLNGKHELSGGQ 157 (171)
Q Consensus 105 ia~~~Gld~~-~~~~~--~~~~~~~~v~~~~~~~~~gv~gvPtfvv~~~~~i~G~~ 157 (171)
+..+.|++-. ..+++ . .....++++.+.. ..|...||.++|+|+ .|.|..
T Consensus 281 LL~~~gV~y~eidVlEld~-~~~~~e~~~~L~~-~tG~~TVPqVFI~Gk-~IGG~D 333 (362)
T 2jad_A 281 LFEKLKVPRSKVLVLQLND-MKEGADIQAALYE-INGQRTVPNIYINGK-HIGGND 333 (362)
T ss_dssp HHTTTCCCTTTEEEEEGGG-STTHHHHHHHHHH-HHCCCSSCEEEETTE-EEESHH
T ss_pred HHHHcCCCcceEEEEEecc-ccCCHHHHHHHHH-HHCCCCcCEEEECCE-EEEChH
Confidence 5667777643 11211 1 0112345444443 348889999999998 476654
No 255
>2ewt_A BLDD, putative DNA-binding protein; the DNA-binding domain of BLDD; 1.81A {Streptomyces coelicolor}
Probab=30.59 E-value=52 Score=18.03 Aligned_cols=25 Identities=24% Similarity=0.194 Sum_probs=18.2
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|+.|....+.+.+..++..+|++.+
T Consensus 43 ~e~g~~~~~~~~l~~la~~l~v~~~ 67 (71)
T 2ewt_A 43 YERGDRAVTVQRLAELADFYGVPVQ 67 (71)
T ss_dssp HHHTCSCCCHHHHHHHHHHHTSCGG
T ss_pred HHCCCCCCCHHHHHHHHHHHCcCHH
Confidence 4456555578888889988888764
No 256
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=30.43 E-value=60 Score=17.84 Aligned_cols=25 Identities=12% Similarity=0.104 Sum_probs=18.5
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|+.|....+.+.+..++..+|++.+
T Consensus 46 ~e~g~~~~~~~~l~~l~~~l~~~~~ 70 (74)
T 1y7y_A 46 VERGQRNVSLVNILKLATALDIEPR 70 (74)
T ss_dssp HHTTCSCCBHHHHHHHHHHTTSCGG
T ss_pred HHCCCCCCCHHHHHHHHHHhCcCHH
Confidence 4556655677888889988888764
No 257
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=30.21 E-value=49 Score=22.58 Aligned_cols=34 Identities=9% Similarity=0.089 Sum_probs=21.4
Q ss_pred hCCCC-----cccEEE-EC--Cee--eeccCC----CHHHHHHHHHHH
Q 030793 136 SANIS-----GVPHFV-LN--GKH--ELSGGQ----PPEVYLRAFQVA 169 (171)
Q Consensus 136 ~~gv~-----gvPtfv-v~--~~~--~i~G~~----~~~~~~~~l~~~ 169 (171)
.+|+. ++|+++ |+ |+. ...|.. +.+++.+.|+++
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 47777 999665 43 542 233543 567888887765
No 258
>1adr_A P22 C2 repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.35.1.2
Probab=29.78 E-value=66 Score=17.75 Aligned_cols=25 Identities=8% Similarity=0.120 Sum_probs=19.9
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|..|....+.+.+..++..+|++.+
T Consensus 38 ~e~g~~~~~~~~l~~ia~~l~~~~~ 62 (76)
T 1adr_A 38 WERSETEPNGENLLALSKALQCSPD 62 (76)
T ss_dssp HHTTSSCCCHHHHHHHHHHTTSCHH
T ss_pred HHcCCCCCCHHHHHHHHHHHCcCHH
Confidence 4556665678889999999999876
No 259
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=29.75 E-value=69 Score=20.67 Aligned_cols=65 Identities=17% Similarity=0.149 Sum_probs=36.3
Q ss_pred CCHHHHHHHHHHcCCchhHhhhcCCCCChHHHHHHHHHhhCCCC----ccc---EEEEC--Cee--eeccCC----CHHH
Q 030793 97 GDKEFLVECARKVGVEGAAEFLDDPNSGLNEVHEELKKYSANIS----GVP---HFVLN--GKH--ELSGGQ----PPEV 161 (171)
Q Consensus 97 ~~~~~L~~ia~~~Gld~~~~~~~~~~~~~~~v~~~~~~~~~gv~----gvP---tfvv~--~~~--~i~G~~----~~~~ 161 (171)
.+.+.+.+++++.|++.. .+.+. .-...+. ..+|+. |+| +|+|+ |+. ...|.. ..+.
T Consensus 79 d~~~~~~~~~~~~~~~~~--~~~d~-~~~~~~~-----~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~ 150 (160)
T 1xvw_A 79 GPPPTHKIWATQSGFTFP--LLSDF-WPHGAVS-----QAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRL 150 (160)
T ss_dssp CCHHHHHHHHHHHTCCSC--EEECT-TTTTHHH-----HHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHH
T ss_pred CCHHHHHHHHHhcCCCce--EEecC-CcChHHH-----HHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHH
Confidence 456778888888887543 22221 0011222 247777 999 77885 542 223433 4566
Q ss_pred HHHHHHHH
Q 030793 162 YLRAFQVA 169 (171)
Q Consensus 162 ~~~~l~~~ 169 (171)
+.+.|+++
T Consensus 151 l~~~l~~l 158 (160)
T 1xvw_A 151 WTDALAAL 158 (160)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 77776654
No 260
>2xi8_A Putative transcription regulator; HTH DNA-binding motif; HET: GOL; 1.21A {Enterococcus faecalis} PDB: 2gzu_A 1utx_A* 2xj3_A 2xiu_A
Probab=29.53 E-value=69 Score=17.03 Aligned_cols=25 Identities=12% Similarity=0.109 Sum_probs=18.7
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|..|....+.+.+..++..+|++.+
T Consensus 34 ~e~g~~~~~~~~l~~i~~~l~~~~~ 58 (66)
T 2xi8_A 34 IEKNKYNPSLQLALKIAYYLNTPLE 58 (66)
T ss_dssp HHTTSCCCCHHHHHHHHHHTTSCHH
T ss_pred HHcCCCCCCHHHHHHHHHHHCcCHH
Confidence 4456555578888999999998875
No 261
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=28.99 E-value=25 Score=22.44 Aligned_cols=13 Identities=15% Similarity=0.345 Sum_probs=10.8
Q ss_pred hhCCCCcccEEEE
Q 030793 135 YSANISGVPHFVL 147 (171)
Q Consensus 135 ~~~gv~gvPtfvv 147 (171)
..+||.++||+++
T Consensus 102 ~~~~v~~~P~~~l 114 (144)
T 1i5g_A 102 TGFDVKSIPTLVG 114 (144)
T ss_dssp HHTTCCSSSEEEE
T ss_pred HHcCCCCCCEEEE
Confidence 4689999999865
No 262
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=28.94 E-value=49 Score=22.30 Aligned_cols=35 Identities=6% Similarity=0.030 Sum_probs=21.5
Q ss_pred hCCCC------cccEEEE-C--Cee--eeccCC----CHHHHHHHHHHHh
Q 030793 136 SANIS------GVPHFVL-N--GKH--ELSGGQ----PPEVYLRAFQVAA 170 (171)
Q Consensus 136 ~~gv~------gvPtfvv-~--~~~--~i~G~~----~~~~~~~~l~~~~ 170 (171)
.+|+. ++|++++ + |+. ...|.. +.+.+.+.|+++.
T Consensus 107 ~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 107 QFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred HhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 35666 8998866 2 442 233543 5778888877653
No 263
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=28.24 E-value=54 Score=24.29 Aligned_cols=32 Identities=13% Similarity=0.179 Sum_probs=22.7
Q ss_pred HHHHHHHHcCCchh--HhhhcCCCCChHHHHHHH
Q 030793 101 FLVECARKVGVEGA--AEFLDDPNSGLNEVHEEL 132 (171)
Q Consensus 101 ~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~ 132 (171)
.+.++|+.+|++.. ..+++......++.++..
T Consensus 4 ti~dvA~~agVS~~TVSrvln~~~~vs~~tr~rV 37 (332)
T 2hsg_A 4 TIYDVAREASVSMATVSRVVNGNPNVKPSTRKKV 37 (332)
T ss_dssp CHHHHHHHTTSCHHHHHHHHTTCTTSCHHHHHHH
T ss_pred CHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHHH
Confidence 47899999999987 567776444556666544
No 264
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=28.18 E-value=27 Score=22.44 Aligned_cols=13 Identities=15% Similarity=0.360 Sum_probs=10.8
Q ss_pred hhCCCCcccEEEE
Q 030793 135 YSANISGVPHFVL 147 (171)
Q Consensus 135 ~~~gv~gvPtfvv 147 (171)
..+||.++||+++
T Consensus 102 ~~~~v~~~Pt~~l 114 (146)
T 1o8x_A 102 KHFNVESIPTLIG 114 (146)
T ss_dssp HHTTCCSSSEEEE
T ss_pred HHhCCCCCCEEEE
Confidence 4689999999875
No 265
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=28.03 E-value=69 Score=18.22 Aligned_cols=25 Identities=12% Similarity=-0.090 Sum_probs=19.7
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|..|....+.+.+..++..+|++.+
T Consensus 45 ~e~g~~~~~~~~~~~ia~~l~v~~~ 69 (80)
T 3kz3_A 45 LFNGINALNAYNAALLAKILKVSVE 69 (80)
T ss_dssp HHTTSSCCCHHHHHHHHHHHTSCGG
T ss_pred HHcCCCCCCHHHHHHHHHHhCCCHH
Confidence 4566666678899999999999865
No 266
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.27 E-value=28 Score=22.17 Aligned_cols=25 Identities=20% Similarity=0.315 Sum_probs=16.0
Q ss_pred hCCCC------cccEEEE--CCee--eeccCCCHH
Q 030793 136 SANIS------GVPHFVL--NGKH--ELSGGQPPE 160 (171)
Q Consensus 136 ~~gv~------gvPtfvv--~~~~--~i~G~~~~~ 160 (171)
+++|. ++||+++ +|+. .+.|..+.+
T Consensus 76 ~~~v~~~~~~~~~Pt~~~~~~G~~~~~~~G~~~~~ 110 (137)
T 2dj0_A 76 RYKVSTSPLTKQLPTLILFQGGKEAMRRPQIDKKG 110 (137)
T ss_dssp HTTCCCCSSSSCSSEEEEESSSSEEEEESCBCSSS
T ss_pred HccCcccCCcCCCCEEEEEECCEEEEEecCcCchH
Confidence 57777 9999987 4542 245655443
No 267
>2jxu_A TERB, KP-TERB; tellurite resistance protein, plasmid, unknown function; NMR {Klebsiella pneumoniae ntuh-k2044}
Probab=26.42 E-value=73 Score=20.99 Aligned_cols=40 Identities=18% Similarity=0.080 Sum_probs=29.3
Q ss_pred cchHHHHHHHHHHHHhhcCC-CCCCHHHHHHHHHHcCCchh
Q 030793 75 LDKQHNLAEELFLGYFTQGK-YIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 75 ~~~~~~~~~~l~~a~~~~g~-~i~~~~~L~~ia~~~Gld~~ 114 (171)
++....+...++.-.+.+|. +......|..++..+|++..
T Consensus 107 ~~~~~~~l~~~~~vA~ADG~~~~~E~~~L~~ia~~Lgl~~~ 147 (153)
T 2jxu_A 107 PEAAQLALRVGIAVAKSDGNFDDDEKSAVREIARSLGFDPA 147 (153)
T ss_dssp HHHHHHHHHHHHHHHTTTTSCSSTHHHHHHHHHHHTTSCSS
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhCcCHH
Confidence 33455677777777778875 44556789999999999864
No 268
>2eqy_A RBP2 like, jumonji, at rich interactive domain 1B; ARID domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=26.39 E-value=1.2e+02 Score=19.53 Aligned_cols=63 Identities=14% Similarity=0.182 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHhcCCccccCCCCCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCch
Q 030793 34 QGIIARMTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEG 113 (171)
Q Consensus 34 ~~~~~~~~~~a~~~g~~~~~~~~~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~~i~~~~~L~~ia~~~Gld~ 113 (171)
..++..+.+.-+..|.++..+.+.....+.++|..++...| -+.++.. +. .=.+|+..+|++.
T Consensus 15 ~~Fl~~L~~F~~~rG~~l~~P~i~gk~lDLy~Ly~~V~~~G--G~~~V~~---~k------------~W~~V~~~lg~~~ 77 (122)
T 2eqy_A 15 LNFLDQIAKYWELQGSTLKIPHVERKILDLFQLNKLVAEEG--GFAVVCK---DR------------KWTKIATKMGFAP 77 (122)
T ss_dssp HHHHHHHHHHHHHHTCCCCCCBSSSSBCCHHHHHHHHHHHT--CHHHHHH---TT------------THHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHcCCCCCCCeECCEeccHHHHHHHHHHcc--CHHHHcC---CC------------cHHHHHHHhCCCC
Confidence 45778888888888999855545677888999999998887 3444442 11 2345777888864
No 269
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=25.80 E-value=28 Score=25.51 Aligned_cols=34 Identities=6% Similarity=-0.025 Sum_probs=22.2
Q ss_pred hhCCCCcccEEEE--CCee--eeccCC-------CHHHHHHHHHH
Q 030793 135 YSANISGVPHFVL--NGKH--ELSGGQ-------PPEVYLRAFQV 168 (171)
Q Consensus 135 ~~~gv~gvPtfvv--~~~~--~i~G~~-------~~~~~~~~l~~ 168 (171)
.+++|.|+|||++ +|+. .+.|.. ..+.|.+.|.+
T Consensus 179 ~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~ 223 (245)
T 1a0r_P 179 DRFSSDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNE 223 (245)
T ss_dssp TSSCTTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHT
T ss_pred HHCCCCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHH
Confidence 3689999999987 5652 244542 34567776654
No 270
>3f6w_A XRE-family like protein; helix-turn-helix, DNA binding protein, xenobiotic response E family of transcriptional regulators; HET: MSE BTB; 1.85A {Pseudomonas syringae PV}
Probab=25.33 E-value=81 Score=17.91 Aligned_cols=25 Identities=12% Similarity=0.084 Sum_probs=20.1
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|+.|....+.+.+..++..+|++.+
T Consensus 47 ~e~g~~~~~~~~l~~l~~~l~~~~~ 71 (83)
T 3f6w_A 47 TENAERRLDVIEFMDFCRGIGTDPY 71 (83)
T ss_dssp HHTTSSCCCHHHHHHHHHHHTCCHH
T ss_pred HHCCCCCCCHHHHHHHHHHcCCCHH
Confidence 4566655678899999999999876
No 271
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=25.07 E-value=24 Score=22.48 Aligned_cols=13 Identities=8% Similarity=0.396 Sum_probs=10.7
Q ss_pred hhCCCCcccEEEE
Q 030793 135 YSANISGVPHFVL 147 (171)
Q Consensus 135 ~~~gv~gvPtfvv 147 (171)
..+||.++||+++
T Consensus 102 ~~~~v~~~Pt~~l 114 (144)
T 1o73_A 102 KTFGVESIPTLIT 114 (144)
T ss_dssp HHHTCCSSSEEEE
T ss_pred HHcCCCCCCEEEE
Confidence 3578999999876
No 272
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=24.74 E-value=33 Score=22.82 Aligned_cols=13 Identities=8% Similarity=0.296 Sum_probs=11.2
Q ss_pred hhCCCCcccEEEE
Q 030793 135 YSANISGVPHFVL 147 (171)
Q Consensus 135 ~~~gv~gvPtfvv 147 (171)
..+||.++||+++
T Consensus 122 ~~~~v~~~Pt~~l 134 (165)
T 3s9f_A 122 KKYSVESIPTLIG 134 (165)
T ss_dssp HHTTCCSSSEEEE
T ss_pred HHcCCCCCCEEEE
Confidence 4689999999876
No 273
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=24.64 E-value=56 Score=24.33 Aligned_cols=32 Identities=9% Similarity=0.221 Sum_probs=21.7
Q ss_pred HHHHHHHHcCCchh--HhhhcCCCCChHHHHHHH
Q 030793 101 FLVECARKVGVEGA--AEFLDDPNSGLNEVHEEL 132 (171)
Q Consensus 101 ~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~ 132 (171)
.+.++|+.+|++.. ..+|+......++.++..
T Consensus 2 ti~diA~~agVS~~TVSrvLn~~~~vs~~tr~rV 35 (340)
T 1qpz_A 2 TIKDVAKRANVSTTTVSHVINKTRFVAEETRNAV 35 (340)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHTCSCCCHHHHHHH
T ss_pred CHHHHHHHHCCCHHHHHHHHcCcCCCCHHHHHHH
Confidence 37789999999986 566765444555555543
No 274
>3b7h_A Prophage LP1 protein 11; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomics; 2.00A {Lactobacillus plantarum WCFS1}
Probab=24.56 E-value=91 Score=17.28 Aligned_cols=25 Identities=8% Similarity=0.126 Sum_probs=19.6
Q ss_pred hhcCCC-CCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKY-IGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~-i~~~~~L~~ia~~~Gld~~ 114 (171)
|..|.. ..+.+.+..++..+|++.+
T Consensus 40 ~e~g~~~~~~~~~l~~ia~~l~~~~~ 65 (78)
T 3b7h_A 40 MFEGRSKRPTITTIRKVCGTLGISVH 65 (78)
T ss_dssp HHCTTCCCCCHHHHHHHHHHHTCCHH
T ss_pred HHcCCCCCCCHHHHHHHHHHcCCCHH
Confidence 445665 5678899999999999876
No 275
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=24.53 E-value=64 Score=24.04 Aligned_cols=34 Identities=12% Similarity=0.135 Sum_probs=24.4
Q ss_pred HHHHHHHHHcCCchh--HhhhcCCCCChHHHHHHHH
Q 030793 100 EFLVECARKVGVEGA--AEFLDDPNSGLNEVHEELK 133 (171)
Q Consensus 100 ~~L~~ia~~~Gld~~--~~~~~~~~~~~~~v~~~~~ 133 (171)
..+.++|+.+|++.. ..+++......++.++...
T Consensus 11 ~ti~diA~~agVS~~TVSr~Ln~~~~vs~~tr~rV~ 46 (344)
T 3kjx_A 11 LTLRDVSEASGVSEMTVSRVLRNRGDVSDATRARVL 46 (344)
T ss_dssp CCHHHHHHHHCCCSHHHHHHHTTCSCCCHHHHHHHH
T ss_pred CCHHHHHHHHCCCHHHHHHHHcCCCCCCHHHHHHHH
Confidence 358999999999987 5677764455666666543
No 276
>3t76_A VANU, transcriptional regulator vanug; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.12A {Enterococcus faecalis} PDB: 3t75_A* 3tyr_A* 3tys_A*
Probab=24.45 E-value=86 Score=18.73 Aligned_cols=24 Identities=4% Similarity=0.111 Sum_probs=19.5
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|+.|..+ +.+.|..+|..+|++.+
T Consensus 57 iE~G~~~-s~~~l~kIa~~L~v~~~ 80 (88)
T 3t76_A 57 LGKNENV-SLTVLLAICEYLNCDFG 80 (88)
T ss_dssp HHTTCCC-CHHHHHHHHHHHTCCGG
T ss_pred HHcCCCc-CHHHHHHHHHHHCcCHH
Confidence 4556665 88999999999999875
No 277
>2kpj_A SOS-response transcriptional repressor, LEXA; NESG, GFT, structural genomics, PSI-2, protein structure initiative; NMR {Eubacterium rectale atcc 33656}
Probab=24.43 E-value=86 Score=18.50 Aligned_cols=25 Identities=12% Similarity=0.093 Sum_probs=20.1
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|+.|....+.+.|..++..+|++.+
T Consensus 42 ~e~G~~~p~~~~l~~ia~~l~v~~~ 66 (94)
T 2kpj_A 42 WCKGIAIPRMGKVQALADYFNINKS 66 (94)
T ss_dssp HHTTSCCCCHHHHHHHHHHHTCCTH
T ss_pred HHhCCCCCCHHHHHHHHHHHCcCHH
Confidence 5567666678899999999999876
No 278
>2b5a_A C.BCLI; helix-turn-helix motif, gene regulation; 1.54A {Bacillus caldolyticus} SCOP: a.35.1.3
Probab=24.43 E-value=87 Score=17.31 Aligned_cols=25 Identities=4% Similarity=-0.016 Sum_probs=19.2
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|..|....+.+.+..++..+|++.+
T Consensus 43 ~e~g~~~~~~~~l~~la~~l~~~~~ 67 (77)
T 2b5a_A 43 VERGDRNISLINIHKICAALDIPAS 67 (77)
T ss_dssp HHTTCSCCBHHHHHHHHHHTTCCHH
T ss_pred HHCCCCCCCHHHHHHHHHHhCcCHH
Confidence 4456655678889999999999875
No 279
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=23.63 E-value=1.4e+02 Score=19.97 Aligned_cols=70 Identities=16% Similarity=0.124 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHcCCchhHhhhc---CCCCChHHHHHHHHHh--hCCCCc-----cc-EEEEC--Cee--eeccCCCHHHH
Q 030793 98 DKEFLVECARKVGVEGAAEFLD---DPNSGLNEVHEELKKY--SANISG-----VP-HFVLN--GKH--ELSGGQPPEVY 162 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~~---~~~~~~~~v~~~~~~~--~~gv~g-----vP-tfvv~--~~~--~i~G~~~~~~~ 162 (171)
+.+.+.+++++.|++-. .+. ........+-..+... ..|+.| +| +|+|+ |+. ...|..+.+.+
T Consensus 100 ~~~~~~~~~~~~~~~~p--~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l 177 (185)
T 2gs3_A 100 SNEEIKEFAAGYNVKFD--MFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVI 177 (185)
T ss_dssp CHHHHHHHHHHTTCCSE--EBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGG
T ss_pred CHHHHHHHHHHcCCCCe--eeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHH
Confidence 56788889998888743 121 1011111121212111 125555 46 55664 542 34577778888
Q ss_pred HHHHHHH
Q 030793 163 LRAFQVA 169 (171)
Q Consensus 163 ~~~l~~~ 169 (171)
.+.|+++
T Consensus 178 ~~~i~~l 184 (185)
T 2gs3_A 178 EKDLPHY 184 (185)
T ss_dssp GGGHHHH
T ss_pred HHHHHHh
Confidence 8888765
No 280
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=23.25 E-value=1.2e+02 Score=21.42 Aligned_cols=27 Identities=11% Similarity=0.054 Sum_probs=18.9
Q ss_pred EEEEC--Cee--eeccCCCHHHHHHHHHHHh
Q 030793 144 HFVLN--GKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 144 tfvv~--~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
||+|+ |+. ...|..+.+.+++.|+++.
T Consensus 180 tfLID~~G~vv~~~~g~~~~~~l~~~I~~ll 210 (215)
T 2i3y_A 180 KFLVGPDGIPVMRWSHRATVSSVKTDILAYL 210 (215)
T ss_dssp EEEECTTSCEEEEECTTSCHHHHHHHHHHHG
T ss_pred EEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 68886 543 2356677888988888764
No 281
>2ofy_A Putative XRE-family transcriptional regulator; transcription regulator, structural genomics, PS protein structure initiative; 1.70A {Rhodococcus SP} SCOP: a.35.1.3
Probab=23.21 E-value=92 Score=17.83 Aligned_cols=25 Identities=12% Similarity=0.070 Sum_probs=19.2
Q ss_pred hhcCCC-CCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKY-IGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~-i~~~~~L~~ia~~~Gld~~ 114 (171)
|+.|.. ..+.+.|..++..+|++.+
T Consensus 47 ~E~g~~~~p~~~~l~~ia~~l~v~~~ 72 (86)
T 2ofy_A 47 IETGRIATPAFFTIAAVARVLDLSLD 72 (86)
T ss_dssp HHTTCCSSCBHHHHHHHHHHTTCCHH
T ss_pred HHcCCCCCCCHHHHHHHHHHhCCCHH
Confidence 455665 5578889999999999876
No 282
>3lfp_A CSP231I C protein; transcriptional regulator, DNA binding protein, helix-turn-H restriction-modification, transcription; 2.00A {Citrobacter SP} PDB: 3lis_A
Probab=22.58 E-value=79 Score=18.83 Aligned_cols=25 Identities=20% Similarity=0.246 Sum_probs=20.7
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|+.|....+.+.+..+|..+|++.+
T Consensus 38 ~E~g~~~p~~~~l~~la~~l~v~~~ 62 (98)
T 3lfp_A 38 YEKGKHAPDFEMANRLAKVLKIPVS 62 (98)
T ss_dssp HHHTSSCCCHHHHHHHHHHHTSCGG
T ss_pred HHCCCCCCCHHHHHHHHHHHCcCHH
Confidence 5567666689999999999999876
No 283
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=22.42 E-value=1.2e+02 Score=20.41 Aligned_cols=31 Identities=13% Similarity=0.163 Sum_probs=23.6
Q ss_pred hCCCCcccEEEECCeeeeccCCCHHHHHHHHHHH
Q 030793 136 SANISGVPHFVLNGKHELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 136 ~~gv~gvPtfvv~~~~~i~G~~~~~~~~~~l~~~ 169 (171)
++|..|. +=+|++.|.|.-+...+..+|+.-
T Consensus 70 ELGt~g~---id~~rlii~G~~~~~~i~~~L~~y 100 (148)
T 2d74_B 70 EIATAGT---LEGRRVVLQGRFTPYLIANKLKKY 100 (148)
T ss_dssp HSCCCEE---EETTEEEESSCCCHHHHHHHHHHH
T ss_pred HhCCcee---ecCCEEEEEeeeCHHHHHHHHHHH
Confidence 6665553 448898899999999999888753
No 284
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=22.39 E-value=27 Score=23.60 Aligned_cols=70 Identities=14% Similarity=0.062 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHcCCchhHhhh---cCCCCChHHHHHHHHHhhC--CC-----CcccE-EEEC--Cee--eeccCCCHHHH
Q 030793 98 DKEFLVECARKVGVEGAAEFL---DDPNSGLNEVHEELKKYSA--NI-----SGVPH-FVLN--GKH--ELSGGQPPEVY 162 (171)
Q Consensus 98 ~~~~L~~ia~~~Gld~~~~~~---~~~~~~~~~v~~~~~~~~~--gv-----~gvPt-fvv~--~~~--~i~G~~~~~~~ 162 (171)
+.+.+.+++++.|++-. .+ +........+-..+..... |+ ..+|+ |+|+ |+. ...|..+.+.+
T Consensus 98 ~~~~~~~~~~~~~~~~p--~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l 175 (183)
T 2obi_A 98 SNEEIKEFAAGYNVKFD--MFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVI 175 (183)
T ss_dssp CHHHHHHHHHTTTCCSE--EBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHH
T ss_pred CHHHHHHHHHHcCCCce--EEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHH
Confidence 57788888888887643 11 1101111112122221111 44 44697 6664 542 34577777888
Q ss_pred HHHHHHH
Q 030793 163 LRAFQVA 169 (171)
Q Consensus 163 ~~~l~~~ 169 (171)
.+.|+++
T Consensus 176 ~~~i~~l 182 (183)
T 2obi_A 176 EKDLPHY 182 (183)
T ss_dssp HTTSGGG
T ss_pred HHHHHHh
Confidence 7776653
No 285
>2lm1_A Lysine-specific demethylase LID; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Drosophila melanogaster}
Probab=22.22 E-value=1.4e+02 Score=18.53 Aligned_cols=63 Identities=10% Similarity=0.147 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhcCCccccCCCCCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCch
Q 030793 34 QGIIARMTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEG 113 (171)
Q Consensus 34 ~~~~~~~~~~a~~~g~~~~~~~~~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~~i~~~~~L~~ia~~~Gld~ 113 (171)
..++..+.+.-+..|.++..+.+.....+.+++...+...| -+.++.. +.. =.+++..+|++.
T Consensus 17 ~~F~~~L~~F~~~~g~~l~~P~i~gk~vdL~~Ly~~V~~~G--G~~~V~~---~~~------------W~~va~~lg~~~ 79 (107)
T 2lm1_A 17 LNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEG--GMEQTTK---DRK------------WAKVANRMQYPS 79 (107)
T ss_dssp HHHHHHHHHHHTTTCCCCSCCCTTTSSCCHHHHHHHHHHHT--CHHHHHH---HTT------------HHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHcCCCCCCCeECCEeecHHHHHHHHHHhc--CHHHhcc---cCc------------HHHHHHHhCCCC
Confidence 35677888888888999875445567778899998888887 3444432 112 235777788864
No 286
>3s8q_A R-M controller protein; protein-DNA complex, helix-turn-helix; HET: DNA; 2.10A {Enterobacter SP} SCOP: a.35.1.0 PDB: 3clc_A* 3ufd_A*
Probab=21.88 E-value=1.1e+02 Score=17.35 Aligned_cols=25 Identities=8% Similarity=-0.076 Sum_probs=20.2
Q ss_pred hhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|+.|....+.+.|..++..+|++.+
T Consensus 44 ~e~g~~~~~~~~l~~ia~~l~v~~~ 68 (82)
T 3s8q_A 44 IERNSRNLTIKSLELIMKGLEVSDV 68 (82)
T ss_dssp HHTTCCCCBHHHHHHHHHHTTCCHH
T ss_pred HHCCCCCCCHHHHHHHHHHHCcCHH
Confidence 4567655678899999999999876
No 287
>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}
Probab=21.71 E-value=64 Score=23.36 Aligned_cols=34 Identities=21% Similarity=0.122 Sum_probs=25.7
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCchh
Q 030793 81 LAEELFLGYFTQGKYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 81 ~~~~l~~a~~~~g~~i~~~~~L~~ia~~~Gld~~ 114 (171)
-.++||..|-..+.+.-..+.+..++.++|++.+
T Consensus 7 ~l~~lF~~Y~d~~~d~I~~eGi~~l~~DLgv~pe 40 (221)
T 4gba_A 7 RLEELFRRYKDEREDAILEEGMERFCNDLCVDPT 40 (221)
T ss_dssp HHHHHHHTTSCSSSSEECHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHhcCCCCCccCHHHHHHHHHHcCCChh
Confidence 3567888876544454568889999999999875
No 288
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=21.68 E-value=1.4e+02 Score=20.72 Aligned_cols=27 Identities=7% Similarity=-0.013 Sum_probs=18.0
Q ss_pred EEEEC--Cee--eeccCCCHHHHHHHHHHHh
Q 030793 144 HFVLN--GKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 144 tfvv~--~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
||+|+ |+. ...|..+.+.+.+.|+++.
T Consensus 162 tflID~~G~i~~~~~g~~~~~~l~~~I~~ll 192 (207)
T 2r37_A 162 KFLVGPDGIPIMRWHHRTTVSNVKMDILSYM 192 (207)
T ss_dssp EEEECTTSCEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 68886 543 2356677888888877653
No 289
>2jrz_A Histone demethylase jarid1C; bright/ARID domain, helical, structural genomics, structural genomics consortium, SGC, oxidoreductase; NMR {Homo sapiens} PDB: 2yqe_A
Probab=21.63 E-value=84 Score=20.05 Aligned_cols=63 Identities=10% Similarity=0.176 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhcCCccccCCCCCCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHcCCch
Q 030793 34 QGIIARMTEVFRGLGLEYNMSGLTGNTLDSHRLLYLAGQQGLDKQHNLAEELFLGYFTQGKYIGDKEFLVECARKVGVEG 113 (171)
Q Consensus 34 ~~~~~~~~~~a~~~g~~~~~~~~~~~s~~a~r~~~~a~~~g~~~~~~~~~~l~~a~~~~g~~i~~~~~L~~ia~~~Gld~ 113 (171)
..++..+.+.-+..|.++..+.+.....+.++|..++...| -+.++... . .=.+++..+|++.
T Consensus 13 ~~Fl~~L~~F~~~rG~~l~~P~i~gk~lDL~~Ly~~V~~~G--G~~~V~~~---~------------~W~~Va~~lg~~~ 75 (117)
T 2jrz_A 13 LNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVVEEG--GYEAICKD---R------------RWARVAQRLNYPP 75 (117)
T ss_dssp HHHHHHHHHHHHTTTSCCCCCEETTEECCHHHHHHHHHHHT--CHHHHHHT---T------------THHHHHHHTTCCT
T ss_pred HHHHHHHHHHHHHcCCCCCCCeECCEeecHHHHHHHHHHcc--CHHHhccc---C------------cHHHHHHHhCCCC
Confidence 46778888888889999875435567778899999888887 34444421 1 2345777888864
No 290
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=21.16 E-value=37 Score=23.06 Aligned_cols=11 Identities=9% Similarity=0.259 Sum_probs=9.3
Q ss_pred CCCCcccEEEE
Q 030793 137 ANISGVPHFVL 147 (171)
Q Consensus 137 ~gv~gvPtfvv 147 (171)
.|+.|+||+++
T Consensus 106 ~~v~~iPt~i~ 116 (167)
T 1z6n_A 106 LERIAIPLVLV 116 (167)
T ss_dssp CSSCCSSEEEE
T ss_pred cCCCCcCeEEE
Confidence 46999999876
No 291
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=20.92 E-value=70 Score=22.30 Aligned_cols=33 Identities=9% Similarity=0.001 Sum_probs=22.4
Q ss_pred CCCccc-EEEEC--Cee--eeccCCCHHHHHHHHHHHh
Q 030793 138 NISGVP-HFVLN--GKH--ELSGGQPPEVYLRAFQVAA 170 (171)
Q Consensus 138 gv~gvP-tfvv~--~~~--~i~G~~~~~~~~~~l~~~~ 170 (171)
+|.++| ||+|+ |+. ...|..+.+.+.+.|+++.
T Consensus 169 ~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~ll 206 (208)
T 2f8a_A 169 DVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALL 206 (208)
T ss_dssp CCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred ccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHHHh
Confidence 466778 55665 543 3457778888888888765
No 292
>2h5n_A Hypothetical protein PG_1108; SAD, MCSG,PSI, structural genomics, PR structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: a.287.1.2
Probab=20.88 E-value=1e+02 Score=20.03 Aligned_cols=42 Identities=10% Similarity=0.033 Sum_probs=31.3
Q ss_pred cCcchHHHHHHHHHHHHhhcCC-CCCCHHHHHHHHHHcCCchh
Q 030793 73 QGLDKQHNLAEELFLGYFTQGK-YIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 73 ~g~~~~~~~~~~l~~a~~~~g~-~i~~~~~L~~ia~~~Gld~~ 114 (171)
..++.-..+.+.+++--+.+|. +......|..++.-+|++..
T Consensus 79 ~~~e~r~~ll~~L~~IA~ADG~i~~~E~~lLr~ia~~Lgls~~ 121 (133)
T 2h5n_A 79 MDEERKKYVASYLGVIMASDGDIDDNELALWTLISTLCGLPTM 121 (133)
T ss_dssp SCHHHHHHHHHHHHHHSCBTTBCCHHHHHHHHHHHHHHTCCCC
T ss_pred CCHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHcCCCHH
Confidence 3444556788888988888885 33445679999999999864
No 293
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=26.35 E-value=21 Score=23.36 Aligned_cols=33 Identities=21% Similarity=0.090 Sum_probs=18.4
Q ss_pred hCC--CCcccEEEE---CCee--eeccCCCHHHHHHHHHHH
Q 030793 136 SAN--ISGVPHFVL---NGKH--ELSGGQPPEVYLRAFQVA 169 (171)
Q Consensus 136 ~~g--v~gvPtfvv---~~~~--~i~G~~~~~~~~~~l~~~ 169 (171)
.+| +.|+|++++ +|+. ...|. +.+.+.+.|+++
T Consensus 107 ~~~~~~~~~P~~~lid~~G~i~~~~~g~-~~~~l~~~l~~l 146 (159)
T 2ls5_A 107 KYALRDAGITRNVLIDREGKIVKLTRLY-NEEEFASLVQQI 146 (159)
Confidence 455 678999875 2442 12343 445566666554
No 294
>3qq6_A HTH-type transcriptional regulator SINR; helix-turn-helix motif, biofilm, repressor, SINI; 1.90A {Bacillus subtilis}
Probab=20.21 E-value=1.1e+02 Score=17.33 Aligned_cols=25 Identities=12% Similarity=0.117 Sum_probs=20.1
Q ss_pred hhcC-CCCCCHHHHHHHHHHcCCchh
Q 030793 90 FTQG-KYIGDKEFLVECARKVGVEGA 114 (171)
Q Consensus 90 ~~~g-~~i~~~~~L~~ia~~~Gld~~ 114 (171)
|+.| ....+.+.|..+|..+|++.+
T Consensus 43 ~E~G~~~~p~~~~l~~ia~~l~v~~~ 68 (78)
T 3qq6_A 43 IERNLQTNPSIQFLEKVSAVLDVSVH 68 (78)
T ss_dssp HHTTSCCCCBHHHHHHHHHHHTCCHH
T ss_pred HHcCCCCCCCHHHHHHHHHHHCcCHH
Confidence 4567 555688899999999999876
Done!