Query 030794
Match_columns 171
No_of_seqs 124 out of 1172
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 06:58:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030794.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030794hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ucz_A UBC7, ubiquitin conjuga 100.0 1.9E-45 6.6E-50 279.8 19.6 154 1-155 1-164 (165)
2 3h8k_A Ubiquitin-conjugating e 100.0 8E-45 2.7E-49 276.1 19.1 152 4-155 2-163 (164)
3 3rz3_A Ubiquitin-conjugating e 100.0 1.1E-44 3.6E-49 279.9 17.4 158 1-158 3-176 (183)
4 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.6E-43 5.5E-48 270.1 17.3 142 1-157 1-152 (169)
5 4gpr_A Ubiquitin-conjugating e 100.0 3E-43 1E-47 264.2 17.1 139 3-155 2-150 (151)
6 2awf_A Ubiquitin-conjugating e 100.0 1.6E-43 5.3E-48 270.9 14.8 147 3-149 15-172 (172)
7 2aak_A UBC1, ubiquitin conjuga 100.0 4.3E-43 1.5E-47 263.6 16.9 140 1-155 1-150 (152)
8 1zdn_A Ubiquitin-conjugating e 100.0 5.8E-43 2E-47 264.5 16.3 138 3-154 11-158 (158)
9 1z2u_A Ubiquitin-conjugating e 100.0 6.9E-43 2.3E-47 261.9 16.4 138 3-154 2-149 (150)
10 2ayv_A Ubiquitin-conjugating e 100.0 8.9E-43 3.1E-47 265.3 16.6 137 4-154 20-166 (166)
11 2c2v_B Ubiquitin-conjugating e 100.0 2.5E-43 8.5E-48 265.4 13.1 138 4-155 4-151 (154)
12 2e2c_A Ubiquitin conjugating e 100.0 8.2E-43 2.8E-47 263.1 15.9 138 4-156 8-155 (156)
13 2c4o_A Ubiquitin-conjugating e 100.0 1.5E-42 5E-47 263.9 17.3 139 3-155 17-165 (165)
14 3rcz_B SUMO-conjugating enzyme 100.0 1.1E-42 3.7E-47 264.2 16.0 142 3-155 8-163 (163)
15 2r0j_A Ubiquitin carrier prote 100.0 9.1E-43 3.1E-47 261.0 15.2 135 7-155 3-147 (149)
16 2gjd_A Ubiquitin-conjugating e 100.0 9.6E-43 3.3E-47 263.0 15.4 143 1-155 1-157 (157)
17 1fxt_A Ubiquitin-conjugating e 100.0 7.3E-43 2.5E-47 261.5 13.8 137 6-155 2-149 (149)
18 1yh2_A HSPC150 protein similar 100.0 4E-42 1.4E-46 262.4 17.7 144 3-156 2-155 (169)
19 2bep_A Ubiquitin-conjugating e 100.0 3.4E-42 1.2E-46 260.5 16.8 139 3-155 6-158 (159)
20 1jat_A Ubiquitin-conjugating e 100.0 1.5E-42 5.1E-47 261.4 14.5 138 4-155 4-151 (155)
21 2grr_A Ubiquitin-conjugating e 100.0 4E-42 1.4E-46 260.6 16.1 142 3-155 5-160 (161)
22 3k9o_A Ubiquitin-conjugating e 100.0 6.1E-42 2.1E-46 268.0 16.2 141 1-156 2-156 (201)
23 2pwq_A Ubiquitin conjugating e 100.0 3.8E-42 1.3E-46 271.5 14.4 141 3-157 21-172 (216)
24 1i7k_A Ubiquitin-conjugating e 100.0 5.2E-42 1.8E-46 263.8 14.7 138 3-155 28-175 (179)
25 2f4z_A Tgtwinscan_2721 - E2 do 100.0 7.9E-42 2.7E-46 265.6 15.7 138 4-155 31-192 (193)
26 3bzh_A Ubiquitin-conjugating e 100.0 1.7E-41 5.8E-46 263.9 17.2 137 4-154 47-193 (194)
27 3fn1_B NEDD8-conjugating enzym 100.0 2.8E-41 9.7E-46 257.2 15.1 144 4-155 13-167 (167)
28 3e46_A Ubiquitin-conjugating e 100.0 6.6E-41 2.3E-45 269.7 17.9 140 3-156 55-208 (253)
29 1yrv_A Ubiquitin-conjugating l 100.0 3E-41 1E-45 257.5 13.2 138 1-152 20-168 (169)
30 1wzv_A Ubiquitin-conjugating e 100.0 6E-41 2E-45 252.6 14.5 137 5-155 4-151 (155)
31 2y9m_A Ubiquitin-conjugating e 100.0 2.4E-40 8.1E-45 253.3 16.6 143 4-158 5-171 (172)
32 1tte_A Ubiquitin-conjugating e 100.0 1.2E-41 4.3E-46 268.3 9.5 139 5-156 2-151 (215)
33 2fo3_A Ubiquitin-conjugating e 100.0 1.4E-40 4.9E-45 242.4 13.9 116 4-133 5-121 (125)
34 1c4z_D UBCH7, ubiquitin conjug 100.0 1E-40 3.4E-45 251.1 11.5 139 5-156 2-150 (154)
35 1y8x_A Ubiquitin-conjugating e 100.0 7.1E-40 2.4E-44 248.0 15.2 133 4-152 5-147 (160)
36 2h2y_A Ubiquitin-conjugating e 100.0 9.5E-40 3.2E-44 241.2 14.4 115 4-132 19-134 (136)
37 2nvu_C NEDD8-conjugating enzym 100.0 1.8E-39 6.2E-44 249.9 14.5 135 3-153 24-168 (180)
38 2onu_A Ubiquitin-conjugating e 100.0 4E-40 1.4E-44 247.5 8.7 135 5-156 2-148 (152)
39 2a7l_A Hypothetical ubiquitin- 100.0 2.4E-39 8.1E-44 239.0 12.5 110 6-129 23-136 (136)
40 2z5d_A Ubiquitin-conjugating e 100.0 9.7E-40 3.3E-44 251.0 10.1 134 5-156 25-170 (179)
41 1yf9_A Ubiquitin carrier prote 100.0 2.2E-39 7.5E-44 247.6 10.7 137 5-159 12-160 (171)
42 1jat_B Ubiquitin-conjugating e 100.0 1.1E-38 3.8E-43 236.1 12.4 119 1-133 2-126 (138)
43 4ddg_A Ubiquitin-conjugating e 100.0 5.8E-38 2E-42 267.5 17.9 144 4-161 2-155 (399)
44 2a4d_A Ubiquitin-conjugating e 100.0 7.2E-38 2.4E-42 236.7 14.3 119 4-133 24-146 (160)
45 3o2u_A NEDD8-conjugating enzym 100.0 7.5E-38 2.6E-42 242.8 14.4 134 4-153 28-177 (190)
46 2q0v_A Ubiquitin-conjugating e 100.0 8.2E-38 2.8E-42 235.7 12.5 117 3-133 19-141 (156)
47 4ds2_A Ubiquitin-conjugating e 100.0 6.8E-38 2.3E-42 238.6 9.5 132 1-147 5-163 (167)
48 1zuo_A Hypothetical protein LO 100.0 6.9E-38 2.4E-42 242.2 9.6 138 2-152 24-179 (186)
49 3ceg_A Baculoviral IAP repeat- 100.0 2E-36 6.8E-41 250.3 16.3 147 2-155 73-243 (323)
50 2hlw_A Ubiquitin-conjugating e 100.0 2.4E-37 8.2E-42 236.0 9.7 119 4-133 34-156 (170)
51 2f4w_A Ubiquitin-conjugating e 100.0 4.8E-36 1.6E-40 232.1 14.6 118 3-133 12-129 (187)
52 2z6o_A UFM1-conjugating enzyme 99.9 5E-28 1.7E-32 181.5 -0.1 99 5-122 32-144 (172)
53 3r3q_A Suppressor protein STP2 99.7 5.2E-18 1.8E-22 127.8 8.6 110 8-133 31-159 (162)
54 3kpa_A Probable ubiquitin fold 99.7 2.1E-19 7.1E-24 132.1 -0.8 83 5-94 34-127 (168)
55 3obq_A Tumor susceptibility ge 99.6 3.2E-15 1.1E-19 110.8 6.0 86 32-136 50-144 (146)
56 2ebm_A RWD domain-containing p 96.6 0.01 3.5E-07 41.8 7.8 68 6-76 11-78 (128)
57 2yz0_A Serine/threonine-protei 95.9 0.088 3E-06 37.4 9.8 68 7-77 12-86 (138)
58 2day_A Ring finger protein 25; 95.8 0.077 2.6E-06 37.2 9.2 68 8-76 11-82 (128)
59 3zqs_A E3 ubiquitin-protein li 95.5 0.11 3.7E-06 39.4 9.2 88 8-133 4-91 (186)
60 2ebk_A RWD domain-containing p 95.2 0.045 1.5E-06 38.5 5.9 66 9-75 11-78 (128)
61 1ukx_A GCN2, GCN2 EIF2alpha ki 93.7 0.32 1.1E-05 34.3 7.7 66 7-75 12-85 (137)
62 2daw_A RWD domain containing p 93.6 0.36 1.2E-05 35.1 8.1 69 5-77 14-99 (154)
63 2dax_A Protein C21ORF6; RWD do 90.5 0.19 6.7E-06 36.3 3.3 25 53-77 73-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 32.1 34 0.0012 16.6 2.0 20 6-25 6-25 (26)
65 3rls_A YAF9, protein AF-9 homo 29.6 1.5E+02 0.0051 21.8 6.2 44 33-78 30-73 (175)
66 2rf4_B DNA-directed RNA polyme 29.2 24 0.00081 23.1 1.5 12 6-17 63-74 (87)
67 3g9r_A Fusion complex of HIV-1 25.7 43 0.0015 18.5 1.9 15 5-19 28-42 (42)
68 2bum_A Protocatechuate 3,4-dio 21.4 83 0.0028 23.7 3.5 25 51-75 109-138 (209)
No 1
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.9e-45 Score=279.78 Aligned_cols=154 Identities=42% Similarity=0.781 Sum_probs=142.9
Q ss_pred CchHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCcc
Q 030794 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (171)
Q Consensus 1 Ma~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (171)
|+ +.+.+||++|+++|++++++|+++.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 1 M~-~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (165)
T 2ucz_A 1 MS-KTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILH 79 (165)
T ss_dssp -C-HHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSC
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCcc
Confidence 77 68999999999999999999999999866899999999999999999999999999999999999999999999999
Q ss_pred CccCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHH
Q 030794 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCF 150 (171)
Q Consensus 81 pnV~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~ 150 (171)
|||+.+|+||+++|+.++.+++|.+.+.++|+|+++|.+||++|+++|.+ ++.++.++..+|.+++++++
T Consensus 80 PNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~ 159 (165)
T 2ucz_A 80 PNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSI 159 (165)
T ss_dssp TTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHH
Confidence 99999999999999888888888888889999999999999999999976 33478889999999999999
Q ss_pred Hhhhh
Q 030794 151 LSVHS 155 (171)
Q Consensus 151 ~~~~~ 155 (171)
++++.
T Consensus 160 ~~~~~ 164 (165)
T 2ucz_A 160 LKSLG 164 (165)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 88753
No 2
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=8e-45 Score=276.09 Aligned_cols=152 Identities=42% Similarity=0.780 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCcc
Q 030794 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV 83 (171)
+.|.+||++|+++|++++++|+++.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV 81 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNI 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCC
Confidence 57899999999999999999999999866699999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHhh
Q 030794 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLSV 153 (171)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~~ 153 (171)
+.+|+||+++|++.+.++++.+.+.++|+|+++|.+||.+|+++|.+ ++.++.++..+|.++++++++++
T Consensus 82 ~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s 161 (164)
T 3h8k_A 82 YPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 161 (164)
T ss_dssp CTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 99999999999988888999999999999999999999999999976 34478899999999999999987
Q ss_pred hh
Q 030794 154 HS 155 (171)
Q Consensus 154 ~~ 155 (171)
+.
T Consensus 162 ~~ 163 (164)
T 3h8k_A 162 LG 163 (164)
T ss_dssp HT
T ss_pred hc
Confidence 64
No 3
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=1.1e-44 Score=279.93 Aligned_cols=158 Identities=41% Similarity=0.805 Sum_probs=132.6
Q ss_pred CchHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCcc
Q 030794 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (171)
Q Consensus 1 Ma~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (171)
||++.+.+||++||++|++++++|+++.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 88899999999999999999999999996668899999999999999999999999999999999999999999999999
Q ss_pred CccCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhc------cchhhHH
Q 030794 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMN------AGYEYGN 144 (171)
Q Consensus 81 pnV~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~------~~~~~~~ 144 (171)
|||+.+|+||+++|++.+.++++.+...++|+|+++|++||++|+++|.+ ++.++.+ +..+|.+
T Consensus 83 PnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~ 162 (183)
T 3rz3_A 83 PNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTD 162 (183)
T ss_dssp TTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHH
T ss_pred CCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHH
Confidence 99999999999999877777888777789999999999999999999976 3346766 6788999
Q ss_pred HHHHHHHhhhhhhh
Q 030794 145 TLHSCFLSVHSVAC 158 (171)
Q Consensus 145 ~~~~~~~~~~~~~~ 158 (171)
+++++++++...+.
T Consensus 163 ~v~~~v~~s~~~~~ 176 (183)
T 3rz3_A 163 IIRKQVLGTKVDAE 176 (183)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887654
No 4
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-43 Score=270.12 Aligned_cols=142 Identities=34% Similarity=0.629 Sum_probs=132.9
Q ss_pred CchHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCcc
Q 030794 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (171)
Q Consensus 1 Ma~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (171)
|+ +.+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 1 Ms-~~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 78 (169)
T 1ayz_A 1 MS-TPARRRLMRDFKRMKEDAPPGVSASPL-PDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFH 78 (169)
T ss_dssp -C-CHHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEec-CCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCcc
Confidence 65 689999999999999999999999997 8899999999999999999999999999999999999999999999999
Q ss_pred CccCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHH
Q 030794 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCF 150 (171)
Q Consensus 81 pnV~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~ 150 (171)
|||+.+|.||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.+++++++
T Consensus 79 PNI~~~G~ICl~iL~-------------~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~ 145 (169)
T 1ayz_A 79 PNVYANGEICLDILQ-------------NRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETV 145 (169)
T ss_dssp TTBCTTSBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCCCCCCeEeehhhc-------------cCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHH
Confidence 999999999999997 8899999999999999999976 34478889999999999999
Q ss_pred Hhhhhhh
Q 030794 151 LSVHSVA 157 (171)
Q Consensus 151 ~~~~~~~ 157 (171)
++++...
T Consensus 146 ~~~a~~~ 152 (169)
T 1ayz_A 146 EKSWEDD 152 (169)
T ss_dssp HHHHHHH
T ss_pred HHHcCCC
Confidence 9998753
No 5
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=3e-43 Score=264.20 Aligned_cols=139 Identities=30% Similarity=0.599 Sum_probs=131.8
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCc
Q 030794 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (171)
++.|.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 80 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPV-GDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPN 80 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccce
Confidence 4678999999999999999999999996 789999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHh
Q 030794 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLS 152 (171)
Q Consensus 83 V~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~ 152 (171)
|+.+|+||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.+++++++++
T Consensus 81 v~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ 147 (151)
T 4gpr_A 81 INKNGVICLDILK-------------DQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRM 147 (151)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ECCCCEEEccccc-------------CCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9999999999997 8999999999999999999977 3448899999999999999999
Q ss_pred hhh
Q 030794 153 VHS 155 (171)
Q Consensus 153 ~~~ 155 (171)
+|.
T Consensus 148 ya~ 150 (151)
T 4gpr_A 148 YAR 150 (151)
T ss_dssp HCC
T ss_pred hcC
Confidence 875
No 6
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=1.6e-43 Score=270.93 Aligned_cols=147 Identities=49% Similarity=0.965 Sum_probs=114.2
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCc
Q 030794 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (171)
++.+.+||++|+++|++++++||++.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPN 94 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPN 94 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCC
Confidence 46789999999999999999999999986689999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCc----------HHHhhccch-hhHHHHHHH
Q 030794 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNY----------AWFLMNAGY-EYGNTLHSC 149 (171)
Q Consensus 83 V~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~----------~~~~~~~~~-~~~~~~~~~ 149 (171)
|+.+|+||+++|...+.++++++...++|+|+++|++||++|+++|.++ +.++.++.. +|.++|++|
T Consensus 95 V~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 95 VDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp BCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 9999999999998766677777777899999999999999999999763 336777777 787777764
No 7
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=4.3e-43 Score=263.60 Aligned_cols=140 Identities=32% Similarity=0.686 Sum_probs=131.5
Q ss_pred CchHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCcc
Q 030794 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (171)
Q Consensus 1 Ma~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (171)
|+ +.+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 1 Ms-~~a~~RL~~E~~~l~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (152)
T 2aak_A 1 MS-TPARKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFH 78 (152)
T ss_dssp CC-CHHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEeC-CCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCccc
Confidence 65 688999999999999999999999986 8899999999999999999999999999999999999999999999999
Q ss_pred CccCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHH
Q 030794 81 PNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCF 150 (171)
Q Consensus 81 pnV~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~ 150 (171)
|||+.+|.||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.+++++++
T Consensus 79 Pnv~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~ 145 (152)
T 2aak_A 79 PNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVV 145 (152)
T ss_dssp TTBCTTSBBCCGGGT-------------TSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCCCCCCEEechhhc-------------CCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHH
Confidence 999999999999996 8899999999999999999976 33478889999999999999
Q ss_pred Hhhhh
Q 030794 151 LSVHS 155 (171)
Q Consensus 151 ~~~~~ 155 (171)
+++|.
T Consensus 146 ~~~a~ 150 (152)
T 2aak_A 146 EQSWT 150 (152)
T ss_dssp HHHCC
T ss_pred HHHcc
Confidence 98874
No 8
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.8e-43 Score=264.45 Aligned_cols=138 Identities=25% Similarity=0.446 Sum_probs=129.8
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCc
Q 030794 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (171)
+..+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 11 s~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 89 (158)
T 1zdn_A 11 PPHIIRLVYKEVTTLTADPPDGIKVFPN-EEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPN 89 (158)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CHHHHHHHHHHHHHHHhCCCCCEEEEEC-CCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCC
Confidence 4678999999999999999999999985 889999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHh
Q 030794 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLS 152 (171)
Q Consensus 83 V~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~ 152 (171)
|+.+|+||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.+++++++++
T Consensus 90 v~~~G~iCl~iL~-------------~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~ 156 (158)
T 1zdn_A 90 VGANGEICVNVLK-------------RDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEI 156 (158)
T ss_dssp BCTTSBBCHHHHT-------------TTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCEEehhhcC-------------CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9999999999997 8999999999999999999976 3337888999999999999988
Q ss_pred hh
Q 030794 153 VH 154 (171)
Q Consensus 153 ~~ 154 (171)
+|
T Consensus 157 ~A 158 (158)
T 1zdn_A 157 HG 158 (158)
T ss_dssp HC
T ss_pred hC
Confidence 75
No 9
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=6.9e-43 Score=261.94 Aligned_cols=138 Identities=32% Similarity=0.661 Sum_probs=129.8
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCc
Q 030794 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (171)
|+.+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPV-GDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 80 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEC-CCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCc
Confidence 4678999999999999999999999996 789999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHh
Q 030794 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLS 152 (171)
Q Consensus 83 V~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~ 152 (171)
|+.+|+||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.+++++++++
T Consensus 81 v~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~ 147 (150)
T 1z2u_A 81 INSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQK 147 (150)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCeEeecccc-------------CCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997 8999999999999999999976 3347888999999999999998
Q ss_pred hh
Q 030794 153 VH 154 (171)
Q Consensus 153 ~~ 154 (171)
+|
T Consensus 148 ~a 149 (150)
T 1z2u_A 148 YA 149 (150)
T ss_dssp HC
T ss_pred Hh
Confidence 76
No 10
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=8.9e-43 Score=265.31 Aligned_cols=137 Identities=34% Similarity=0.672 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCcc
Q 030794 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV 83 (171)
+.+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI 98 (166)
T 2ayv_A 20 QGALKRINKELNDLSKDPPTNCSAGPV-GDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNI 98 (166)
T ss_dssp TTHHHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcC
Confidence 468899999999999999999999996 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCc----------HHHhhccchhhHHHHHHHHHhh
Q 030794 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNY----------AWFLMNAGYEYGNTLHSCFLSV 153 (171)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~----------~~~~~~~~~~~~~~~~~~~~~~ 153 (171)
+.+|.||+++|. ++|+|+++|.+||.+|+++|.++ +.++.++..+|.++++++++++
T Consensus 99 ~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~ 165 (166)
T 2ayv_A 99 NSQGAICLDILK-------------DQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKY 165 (166)
T ss_dssp CTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCeEEccccc-------------ccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 999999999997 89999999999999999999763 3478889999999999999887
Q ss_pred h
Q 030794 154 H 154 (171)
Q Consensus 154 ~ 154 (171)
|
T Consensus 166 A 166 (166)
T 2ayv_A 166 A 166 (166)
T ss_dssp C
T ss_pred C
Confidence 5
No 11
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.5e-43 Score=265.45 Aligned_cols=138 Identities=28% Similarity=0.462 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCcc
Q 030794 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV 83 (171)
..+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 4 ~~~~~RL~kEl~~l~~~~~~~i~~~~~-~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (154)
T 2c2v_B 4 AGLPRRIIKETQRLLAEPVPGIKAEPD-ESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNV 82 (154)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEC-CCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcC
Confidence 567899999999999999999999986 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHhh
Q 030794 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLSV 153 (171)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~~ 153 (171)
+.+|+||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.++++++++++
T Consensus 83 ~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~ 149 (154)
T 2c2v_B 83 DKLGRICLDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLY 149 (154)
T ss_dssp CTTCBBCCHHHH-------------TSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeEEchhcc-------------CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 999999999997 8999999999999999999976 34478889999999999999998
Q ss_pred hh
Q 030794 154 HS 155 (171)
Q Consensus 154 ~~ 155 (171)
|.
T Consensus 150 a~ 151 (154)
T 2c2v_B 150 AM 151 (154)
T ss_dssp SS
T ss_pred cC
Confidence 85
No 12
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=8.2e-43 Score=263.09 Aligned_cols=138 Identities=33% Similarity=0.578 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCcc
Q 030794 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV 83 (171)
+.+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i~~~p~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 86 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGITAFPD-GDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNV 86 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEC-CCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCC
Confidence 558999999999999999999999986 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHhh
Q 030794 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLSV 153 (171)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~~ 153 (171)
+.+|.||+++|. ++|+|+++|.+||.+|+++|.+ ++.++ ++..+|.++++++++++
T Consensus 87 ~~~G~iCl~iL~-------------~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~ 152 (156)
T 2e2c_A 87 DQSGNICLDILK-------------ENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTA 152 (156)
T ss_dssp CTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHH
T ss_pred ccCceEECcccc-------------ccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHh
Confidence 999999999997 8999999999999999999976 33467 78899999999999998
Q ss_pred hhh
Q 030794 154 HSV 156 (171)
Q Consensus 154 ~~~ 156 (171)
++.
T Consensus 153 ~~~ 155 (156)
T 2e2c_A 153 QSD 155 (156)
T ss_dssp HHC
T ss_pred ccC
Confidence 763
No 13
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.5e-42 Score=263.91 Aligned_cols=139 Identities=32% Similarity=0.643 Sum_probs=130.2
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCc
Q 030794 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (171)
.+.+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 17 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPn 95 (165)
T 2c4o_A 17 GSMALKRIHKELNDLARDPPAQCSAGPV-GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 95 (165)
T ss_dssp CHHHHHHHHHHHHHHHSSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCc
Confidence 3678999999999999999999999996 789999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHh
Q 030794 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLS 152 (171)
Q Consensus 83 V~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~ 152 (171)
|+.+|+||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.+++++++++
T Consensus 96 V~~~G~ICl~iL~-------------~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~ 162 (165)
T 2c4o_A 96 INSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQK 162 (165)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCeEeehhhc-------------CCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997 8999999999999999999976 3347888999999999999998
Q ss_pred hhh
Q 030794 153 VHS 155 (171)
Q Consensus 153 ~~~ 155 (171)
+|.
T Consensus 163 ~a~ 165 (165)
T 2c4o_A 163 YAM 165 (165)
T ss_dssp TTC
T ss_pred HhC
Confidence 763
No 14
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-42 Score=264.17 Aligned_cols=142 Identities=31% Similarity=0.587 Sum_probs=129.7
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCC-C---CceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCC
Q 030794 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDE-S---NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM 78 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~-~---n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 78 (171)
|.+|++||++|+++|++++++|+++.+.++ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 468999999999999999999999998733 2 899999999999999999999999999999999999999999999
Q ss_pred ccCccCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHH
Q 030794 79 WHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHS 148 (171)
Q Consensus 79 ~HpnV~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~ 148 (171)
|||||+.+|+||+++|.. .++|+|+++|.+||.+|+++|.+ ++.++.++..+|.+++++
T Consensus 88 ~HPnV~~~G~iCl~iL~~-----------~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~ 156 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNE-----------EEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRA 156 (163)
T ss_dssp CSTTBCTTSBBCCGGGCT-----------TTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHH
T ss_pred ccCCCCCCCcEeccccCC-----------CCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHH
Confidence 999999999999999962 24699999999999999999976 334788899999999999
Q ss_pred HHHhhhh
Q 030794 149 CFLSVHS 155 (171)
Q Consensus 149 ~~~~~~~ 155 (171)
+++++|.
T Consensus 157 ~~~~ya~ 163 (163)
T 3rcz_B 157 QARENAP 163 (163)
T ss_dssp HHHHTCC
T ss_pred HHHHhCc
Confidence 9998873
No 15
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=9.1e-43 Score=261.05 Aligned_cols=135 Identities=26% Similarity=0.501 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCccCCC
Q 030794 7 SLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPD 86 (171)
Q Consensus 7 ~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~ 86 (171)
.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPV-PENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEC-CCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 589999999999999999999996 7899999999999999999999999999999999999999999999999999999
Q ss_pred CceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHhhhh
Q 030794 87 GKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLSVHS 155 (171)
Q Consensus 87 G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (171)
|+||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.++++++++++|.
T Consensus 82 G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 147 (149)
T 2r0j_A 82 GRICLDILK-------------DKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYAN 147 (149)
T ss_dssp CBBCCGGGT-------------TTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CEEechhcC-------------CCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 999999997 8999999999999999999976 3347888999999999999999875
No 16
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=9.6e-43 Score=262.99 Aligned_cols=143 Identities=27% Similarity=0.489 Sum_probs=129.3
Q ss_pred CchHHHHHHHHHHHHHHhhCCCCCeEEEecCC----CCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEec
Q 030794 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDE----SNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (171)
Q Consensus 1 Ma~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~----~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 76 (171)
|+ +.+.+||++|+++|++++++|+++.+.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 1 Ms-~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 79 (157)
T 2gjd_A 1 MS-SLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPA 79 (157)
T ss_dssp ---CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCT
T ss_pred CC-hHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccC
Confidence 65 68999999999999999999999998632 48999999999999999999999999999999999999999999
Q ss_pred CCccCccCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHH
Q 030794 77 EMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTL 146 (171)
Q Consensus 77 ~i~HpnV~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~ 146 (171)
++|||||+.+|.||+++|+. .++|+|+++|.+||.+|+++|.+ ++.++.++..+|.+++
T Consensus 80 ~i~HPnv~~~G~iCl~iL~~-----------~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~ 148 (157)
T 2gjd_A 80 GFYHPNVYPSGTICLSILNE-----------DQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKV 148 (157)
T ss_dssp TCCCTTBCTTSBBCCGGGCT-----------TTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHH
T ss_pred CCccCCCCCCCcEeeecccC-----------CCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHH
Confidence 99999999999999999972 13799999999999999999976 3347888999999999
Q ss_pred HHHHHhhhh
Q 030794 147 HSCFLSVHS 155 (171)
Q Consensus 147 ~~~~~~~~~ 155 (171)
+++++++|.
T Consensus 149 ~~~~~~~a~ 157 (157)
T 2gjd_A 149 LLQAKQYSK 157 (157)
T ss_dssp HHHHHHTBC
T ss_pred HHHHHHhcC
Confidence 999998873
No 17
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=7.3e-43 Score=261.54 Aligned_cols=137 Identities=27% Similarity=0.514 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCccCC
Q 030794 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYP 85 (171)
Q Consensus 6 a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~ 85 (171)
+.+||++|+++|++++++|+++.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 46999999999999999999999975559999999999999999999999999999999999999999999999999998
Q ss_pred -CCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHhhh
Q 030794 86 -DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLSVH 154 (171)
Q Consensus 86 -~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 154 (171)
+|.||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.++++++++++|
T Consensus 82 ~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a 148 (149)
T 1fxt_A 82 VTGAICLDILK-------------NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYA 148 (149)
T ss_dssp SSCCBCCHHHH-------------TSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHC
T ss_pred CCCeEeCCcCC-------------CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 9999999997 8999999999999999999966 344788899999999999999887
Q ss_pred h
Q 030794 155 S 155 (171)
Q Consensus 155 ~ 155 (171)
.
T Consensus 149 ~ 149 (149)
T 1fxt_A 149 S 149 (149)
T ss_dssp C
T ss_pred C
Confidence 3
No 18
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4e-42 Score=262.44 Aligned_cols=144 Identities=22% Similarity=0.418 Sum_probs=132.7
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCc
Q 030794 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (171)
|.++.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQD-KDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPN 80 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeC-CCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCcccc
Confidence 5689999999999999999999999985 889999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHh
Q 030794 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLS 152 (171)
Q Consensus 83 V~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~ 152 (171)
|+.+|.||+++|+... .++|+|+++|.+||.+|+++|.+ ++.++.++..+|.++++++++.
T Consensus 81 v~~~G~iCl~iL~~~~---------~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~ 151 (169)
T 1yh2_A 81 IDSAGRICLDVLKLPP---------KGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEK 151 (169)
T ss_dssp BCTTCBBCCGGGSCTT---------TSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCcCCeEecccccCCc---------ccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999996321 27899999999999999999976 3347888899999999999999
Q ss_pred hhhh
Q 030794 153 VHSV 156 (171)
Q Consensus 153 ~~~~ 156 (171)
+|..
T Consensus 152 ~a~~ 155 (169)
T 1yh2_A 152 HARQ 155 (169)
T ss_dssp HSCC
T ss_pred Hccc
Confidence 9874
No 19
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=3.4e-42 Score=260.48 Aligned_cols=139 Identities=29% Similarity=0.535 Sum_probs=129.1
Q ss_pred hHHHHHHHHHHHHHHhhC---CCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCc
Q 030794 3 KSQASLLLQKQLKDLCKN---PVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMW 79 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~---~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 79 (171)
++.+.+||++|+++|+++ ++.|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 6 s~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 84 (159)
T 2bep_A 6 ANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 84 (159)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHTTSEEEEEC-SSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCCCEEEEeC-CCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCC
Confidence 368999999999999985 5789999996 779999999999999999999999999999999999999999999999
Q ss_pred cCccCC-CCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHH
Q 030794 80 HPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHS 148 (171)
Q Consensus 80 HpnV~~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~ 148 (171)
||||+. +|.||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.+++++
T Consensus 85 HPni~~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~ 151 (159)
T 2bep_A 85 HPNISSVTGAICLDILK-------------DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARL 151 (159)
T ss_dssp BTTBCTTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHH
T ss_pred ccCCCCCCCEEeChhhh-------------ccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHH
Confidence 999995 9999999997 8899999999999999999976 334788899999999999
Q ss_pred HHHhhhh
Q 030794 149 CFLSVHS 155 (171)
Q Consensus 149 ~~~~~~~ 155 (171)
+++++|.
T Consensus 152 ~~~~~a~ 158 (159)
T 2bep_A 152 WAHVYAG 158 (159)
T ss_dssp HHHHHSC
T ss_pred HHHHhhc
Confidence 9999874
No 20
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.5e-42 Score=261.42 Aligned_cols=138 Identities=25% Similarity=0.464 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCcc
Q 030794 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV 83 (171)
+.+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~-~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPH-DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNI 82 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEC-CCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCC
Confidence 457799999999999999999999986 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHhh
Q 030794 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLSV 153 (171)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~~ 153 (171)
+.+|.||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.++++++++++
T Consensus 83 ~~~G~iCl~iL~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~ 149 (155)
T 1jat_A 83 DRLGRICLDVLK-------------TNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLY 149 (155)
T ss_dssp CTTCCBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEchhhc-------------cCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 999999999996 8999999999999999999966 44578889999999999999998
Q ss_pred hh
Q 030794 154 HS 155 (171)
Q Consensus 154 ~~ 155 (171)
|.
T Consensus 150 a~ 151 (155)
T 1jat_A 150 AK 151 (155)
T ss_dssp SE
T ss_pred cc
Confidence 85
No 21
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=4e-42 Score=260.58 Aligned_cols=142 Identities=30% Similarity=0.511 Sum_probs=130.1
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecC----CCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCC
Q 030794 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVD----ESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM 78 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~~~~~i~~~~~~----~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 78 (171)
++.+.+||++|+++|++++++|+.+.+.+ ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 5 ~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 84 (161)
T 2grr_A 5 SGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL 84 (161)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCc
Confidence 47899999999999999999999998862 36899999999999999999999999999999999999999999999
Q ss_pred ccCccCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHH
Q 030794 79 WHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHS 148 (171)
Q Consensus 79 ~HpnV~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~ 148 (171)
|||||+.+|.||+++|.. .++|+|+++|.+||.+|+++|.+ ++.++.++..+|.+++++
T Consensus 85 ~HPnv~~~G~iCl~iL~~-----------~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~ 153 (161)
T 2grr_A 85 FHPNVYPSGTVCLSILEE-----------DKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRA 153 (161)
T ss_dssp CSTTBCTTSBBCCGGGCT-----------TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHH
T ss_pred ccCCCCCCCeEeehhcCC-----------CCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHH
Confidence 999999999999999961 14899999999999999999976 334788899999999999
Q ss_pred HHHhhhh
Q 030794 149 CFLSVHS 155 (171)
Q Consensus 149 ~~~~~~~ 155 (171)
+++++|.
T Consensus 154 ~~~~~a~ 160 (161)
T 2grr_A 154 QAKKFAP 160 (161)
T ss_dssp HHHHTCC
T ss_pred HHHHHhc
Confidence 9998874
No 22
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=6.1e-42 Score=268.01 Aligned_cols=141 Identities=30% Similarity=0.543 Sum_probs=130.2
Q ss_pred CchHHHHHHHHHHHHHHhhCC---CCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecC
Q 030794 1 MAKSQASLLLQKQLKDLCKNP---VDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (171)
Q Consensus 1 Ma~~~a~~Rl~~El~~l~~~~---~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (171)
|+ +.|.+||++|+++|++++ +.||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 Ms-~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 79 (201)
T 3k9o_A 2 MA-NIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK 79 (201)
T ss_dssp ---CTTHHHHHHHHHHHHTCHHHHTTSEEEEEC-STTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred Cc-HHHHHHHHHHHHHHHhCCCCCCCCEEEEEC-CCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccC
Confidence 55 678999999999999873 679999997 7899999999999999999999999999999999999999999999
Q ss_pred CccCccCC-CCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHH
Q 030794 78 MWHPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTL 146 (171)
Q Consensus 78 i~HpnV~~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~ 146 (171)
+|||||+. +|.||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.+++
T Consensus 80 i~HPnv~~~~G~iCl~iL~-------------~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a 146 (201)
T 3k9o_A 80 IWHPNISSVTGAICLDILK-------------DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTA 146 (201)
T ss_dssp CCBTTBCTTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHH
T ss_pred cccCCCcCCCCeeeCcccc-------------cCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHH
Confidence 99999995 9999999997 8999999999999999999977 3347899999999999
Q ss_pred HHHHHhhhhh
Q 030794 147 HSCFLSVHSV 156 (171)
Q Consensus 147 ~~~~~~~~~~ 156 (171)
+++++.+|..
T Consensus 147 ~~~~~~~a~~ 156 (201)
T 3k9o_A 147 RLWAHVYAGA 156 (201)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHhccc
Confidence 9999999974
No 23
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=3.8e-42 Score=271.45 Aligned_cols=141 Identities=31% Similarity=0.591 Sum_probs=131.8
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCc
Q 030794 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (171)
++.+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 21 ~s~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPN 99 (216)
T 2pwq_A 21 GSKELLRLQKELKDIENENVQEIDAHIK-DSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPN 99 (216)
T ss_dssp SCHHHHHHHHHHHHHHHSCTTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred cCHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCC
Confidence 3679999999999999999999999997 789999999999999999999999999999999999999999999999999
Q ss_pred cCC-CCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCc----------HHHhhccchhhHHHHHHHHH
Q 030794 83 VYP-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNY----------AWFLMNAGYEYGNTLHSCFL 151 (171)
Q Consensus 83 V~~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~----------~~~~~~~~~~~~~~~~~~~~ 151 (171)
|+. +|.||+++|. ++|+|+++|.+||.+|+++|.++ +.++.++..+|.++++++++
T Consensus 100 I~~~~G~ICL~iL~-------------~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~ 166 (216)
T 2pwq_A 100 ISSQTGAICLDVLK-------------NEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTK 166 (216)
T ss_dssp BCTTTCBBCCHHHH-------------HHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CcCCCCEEEchhhc-------------ccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHH
Confidence 995 9999999997 78999999999999999999763 33788899999999999999
Q ss_pred hhhhhh
Q 030794 152 SVHSVA 157 (171)
Q Consensus 152 ~~~~~~ 157 (171)
.+|...
T Consensus 167 ~ya~~~ 172 (216)
T 2pwq_A 167 TFATGP 172 (216)
T ss_dssp HHSCCC
T ss_pred HhcCCC
Confidence 999743
No 24
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.2e-42 Score=263.84 Aligned_cols=138 Identities=25% Similarity=0.451 Sum_probs=127.9
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCc
Q 030794 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (171)
++.+.+||++||++|++++++||++.+. ++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++||||
T Consensus 28 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 106 (179)
T 1i7k_A 28 RGPVGKRLQQELMTLMMSGDKGISAFPE-SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPN 106 (179)
T ss_dssp --CHHHHHHHHHHHHHHHCCTTEEEEEE-TTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTT
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEEc-CCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCc
Confidence 4668899999999999999999999986 789999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHh
Q 030794 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLS 152 (171)
Q Consensus 83 V~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~ 152 (171)
|+.+|+||+++|. ++|+|+++|.+||.+|+++|.+ ++.++ ++..+|.+++++++++
T Consensus 107 V~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~ 172 (179)
T 1i7k_A 107 VDTQGNISLDILK-------------EKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSK 172 (179)
T ss_dssp BCTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHT
T ss_pred cccCCeEEcccCc-------------CcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHH
Confidence 9999999999997 8999999999999999999966 33477 8889999999999988
Q ss_pred hhh
Q 030794 153 VHS 155 (171)
Q Consensus 153 ~~~ 155 (171)
++.
T Consensus 173 ~~~ 175 (179)
T 1i7k_A 173 QVT 175 (179)
T ss_dssp TCC
T ss_pred Hhc
Confidence 764
No 25
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=7.9e-42 Score=265.56 Aligned_cols=138 Identities=28% Similarity=0.559 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHHHhhCCC-------------CCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCC
Q 030794 4 SQASLLLQKQLKDLCKNPV-------------DGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPP 70 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~-------------~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP 70 (171)
..+.+||++|+++|+++++ .||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP 109 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIV-GGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPP 109 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEc-CCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCC
Confidence 4578999999999999987 79999997 789999999999999999999999999999999999999
Q ss_pred eeEEecCCccCccCC-CCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccc
Q 030794 71 TVRFTSEMWHPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAG 139 (171)
Q Consensus 71 ~v~f~t~i~HpnV~~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~ 139 (171)
+|+|.|++|||||+. +|.||+++|. ++|+|+++|.+||++|+++|.+ ++.++.++.
T Consensus 110 ~V~F~T~i~HPNI~~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~ 176 (193)
T 2f4z_A 110 KMKFVTKIWHPNISSQTGAICLDILK-------------HEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENH 176 (193)
T ss_dssp EEEESSCCCBTTBCTTTCBBCCGGGT-------------TTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCH
T ss_pred eEEEecCCccCCCcCCCCEEECcccc-------------ccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCH
Confidence 999999999999995 9999999997 7899999999999999999976 344788999
Q ss_pred hhhHHHHHHHHHhhhh
Q 030794 140 YEYGNTLHSCFLSVHS 155 (171)
Q Consensus 140 ~~~~~~~~~~~~~~~~ 155 (171)
.+|.++++++++++|.
T Consensus 177 ~~f~~~ar~~t~~ya~ 192 (193)
T 2f4z_A 177 PLFVQTAKLWTETFAK 192 (193)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHcc
Confidence 9999999999998874
No 26
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.7e-41 Score=263.94 Aligned_cols=137 Identities=31% Similarity=0.593 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCcc
Q 030794 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV 83 (171)
+.+.+||++||++|++++++||++.+. ++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 125 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPK-GDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNI 125 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecc-cCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceE
Confidence 568999999999999999999999986 8899999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCc----------HHHhhccchhhHHHHHHHHHhh
Q 030794 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNY----------AWFLMNAGYEYGNTLHSCFLSV 153 (171)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~----------~~~~~~~~~~~~~~~~~~~~~~ 153 (171)
+.+|.|||++|. ++|+|+++|.+||++|+++|.++ +.++.++..+|.++++++++++
T Consensus 126 ~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~y 192 (194)
T 3bzh_A 126 NSQGVICLDILK-------------DNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRY 192 (194)
T ss_dssp CTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCceechhhh-------------ccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 999999999996 89999999999999999999763 3378889999999999999987
Q ss_pred h
Q 030794 154 H 154 (171)
Q Consensus 154 ~ 154 (171)
|
T Consensus 193 a 193 (194)
T 3bzh_A 193 A 193 (194)
T ss_dssp C
T ss_pred h
Confidence 6
No 27
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=2.8e-41 Score=257.25 Aligned_cols=144 Identities=23% Similarity=0.446 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCcc
Q 030794 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV 83 (171)
+.+.+||++|+++|++++++|+++.+.+++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 91 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNI 91 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCC
Confidence 579999999999999999999999977678999999998 8999999999999999999999999999999999999999
Q ss_pred CCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCc-----------HHHhhccchhhHHHHHHHHHh
Q 030794 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNY-----------AWFLMNAGYEYGNTLHSCFLS 152 (171)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~-----------~~~~~~~~~~~~~~~~~~~~~ 152 (171)
+.+|+||+++|... +...++|+|+++|.+||.+|+++|.+. +.++.++..+|.+++++++++
T Consensus 92 ~~~G~iCl~iL~~~-------~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~ 164 (167)
T 3fn1_B 92 TETGEICLSLLREH-------SIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKR 164 (167)
T ss_dssp CTTCCBCCGGGSBC-------SSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCEEechhhccC-------CCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 99999999999731 112358999999999999999999772 237888999999999999999
Q ss_pred hhh
Q 030794 153 VHS 155 (171)
Q Consensus 153 ~~~ 155 (171)
+|+
T Consensus 165 ~A~ 167 (167)
T 3fn1_B 165 YAR 167 (167)
T ss_dssp HCC
T ss_pred hcC
Confidence 874
No 28
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=6.6e-41 Score=269.73 Aligned_cols=140 Identities=29% Similarity=0.529 Sum_probs=130.7
Q ss_pred hHHHHHHHHHHHHHHhhC---CCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCc
Q 030794 3 KSQASLLLQKQLKDLCKN---PVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMW 79 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~---~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 79 (171)
++.+.+||++||++|+++ ++.||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 55 s~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~-~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 133 (253)
T 3e46_A 55 ANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 133 (253)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHTTSEEEEEC-STTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCEEEEEC-CCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCc
Confidence 378999999999999987 4689999997 789999999999999999999999999999999999999999999999
Q ss_pred cCccCC-CCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCc----------HHHhhccchhhHHHHHH
Q 030794 80 HPNVYP-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNY----------AWFLMNAGYEYGNTLHS 148 (171)
Q Consensus 80 HpnV~~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~----------~~~~~~~~~~~~~~~~~ 148 (171)
||||+. +|.||+++|. ++|+|+++|.+||++|+++|.++ +.++.++..+|.+++++
T Consensus 134 HPNV~~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~ 200 (253)
T 3e46_A 134 HPNISSVTGAICLDILK-------------DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARL 200 (253)
T ss_dssp BTTBCTTTCBBCCGGGT-------------TCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHH
T ss_pred cCCccCCCCeeeccccc-------------CCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHH
Confidence 999995 9999999997 89999999999999999999773 34788999999999999
Q ss_pred HHHhhhhh
Q 030794 149 CFLSVHSV 156 (171)
Q Consensus 149 ~~~~~~~~ 156 (171)
|++.+|..
T Consensus 201 ~t~~yA~~ 208 (253)
T 3e46_A 201 WAHVYAGA 208 (253)
T ss_dssp HHHHHHCC
T ss_pred HHHHhccc
Confidence 99999974
No 29
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3e-41 Score=257.50 Aligned_cols=138 Identities=30% Similarity=0.522 Sum_probs=124.4
Q ss_pred CchHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCcc
Q 030794 1 MAKSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (171)
Q Consensus 1 Ma~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (171)
|+ +.+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 20 M~-~~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 97 (169)
T 1yrv_A 20 MH-GRAYLLLHRDFCDLKENNYKGITAKPV-SEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFH 97 (169)
T ss_dssp GG-CHHHHHHHHHHHHHHHHCCTTEEEEEC-STTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCC
T ss_pred cC-hHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCcc
Confidence 44 689999999999999999999999986 7899999999999999999999999999999999999999999999999
Q ss_pred Ccc-CCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHH
Q 030794 81 PNV-YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSC 149 (171)
Q Consensus 81 pnV-~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~ 149 (171)
||| +.+|+||+++|+. .++|+|+++|.+||.+|+++|.+ ++.++.++..+|.++ +++
T Consensus 98 PNI~~~~G~ICL~iL~~-----------~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~ 165 (169)
T 1yrv_A 98 PNVDPHTGQPCIDFLDN-----------PEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRL 165 (169)
T ss_dssp TTBCTTTCCBCCHHHHC-----------GGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHH
T ss_pred CcccCCCCeEeehhhcC-----------CcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHH
Confidence 999 7899999999951 26899999999999999999976 334778888888877 777
Q ss_pred HHh
Q 030794 150 FLS 152 (171)
Q Consensus 150 ~~~ 152 (171)
++.
T Consensus 166 v~~ 168 (169)
T 1yrv_A 166 FNR 168 (169)
T ss_dssp HC-
T ss_pred hhC
Confidence 653
No 30
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=6e-41 Score=252.63 Aligned_cols=137 Identities=29% Similarity=0.559 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEE-EecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCcc
Q 030794 5 QASLLLQKQLKDLCKNPVDGFSA-GLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (171)
Q Consensus 5 ~a~~Rl~~El~~l~~~~~~~i~~-~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV 83 (171)
.+.+||++|+++|++++++|+++ .+ +++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~-~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV 81 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSS-DDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNV 81 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEE-CSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEec-CCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcC
Confidence 47899999999999999999999 55 5889999999999 999999999999999999999999999999999999999
Q ss_pred CCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHhh
Q 030794 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLSV 153 (171)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~~ 153 (171)
+.+|.||+++|+ .++|+|+++|.+||.+|+++|.+ ++.++.++..+|.++++++++++
T Consensus 82 ~~~G~iCl~iL~------------~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~ 149 (155)
T 1wzv_A 82 DENGQICLPIIS------------SENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRF 149 (155)
T ss_dssp CTTCBCCCGGGC------------TTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCeEeecCCC------------ccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999993 28999999999999999999976 34478889999999999999998
Q ss_pred hh
Q 030794 154 HS 155 (171)
Q Consensus 154 ~~ 155 (171)
|.
T Consensus 150 a~ 151 (155)
T 1wzv_A 150 GV 151 (155)
T ss_dssp CE
T ss_pred cc
Confidence 86
No 31
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=2.4e-40 Score=253.28 Aligned_cols=143 Identities=24% Similarity=0.409 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHhh-C-C------CC---CeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCee
Q 030794 4 SQASLLLQKQLKDLCK-N-P------VD---GFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTV 72 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~-~-~------~~---~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v 72 (171)
+.+.+||++|+++|++ + + +. ++.+.+.+++|+++|+++|.||++|||+||.|+++|.||++||++||+|
T Consensus 5 ~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v 84 (172)
T 2y9m_A 5 DTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKI 84 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEE
Confidence 6799999999999998 5 3 33 4566774588999999999999999999999999999999999999999
Q ss_pred EEec-CCccCccC-CCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhc-cc
Q 030794 73 RFTS-EMWHPNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMN-AG 139 (171)
Q Consensus 73 ~f~t-~i~HpnV~-~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~-~~ 139 (171)
+|.| ++|||||+ .+|.||+++|+ .++|+|+++|.+||.+|+++|.+ ++.++.+ +.
T Consensus 85 ~f~t~~i~HPni~~~~G~iCl~iL~------------~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~ 152 (172)
T 2y9m_A 85 SFMQNNILHCNVKSATGEICLNILK------------PEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDM 152 (172)
T ss_dssp EECTTSCCCTTEETTTTEECCGGGS------------TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCH
T ss_pred EEeeCCeecCCCcCCCCEEeccccC------------CCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCH
Confidence 9999 99999995 79999999996 27899999999999999999976 3447888 88
Q ss_pred hhhHHHHHHHHHhhhhhhh
Q 030794 140 YEYGNTLHSCFLSVHSVAC 158 (171)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~ 158 (171)
.+|.++++++++.++..+.
T Consensus 153 ~~f~~~~~~~~~~~~~~~~ 171 (172)
T 2y9m_A 153 SAYQGIVKYFLAERERINN 171 (172)
T ss_dssp HHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHhhhc
Confidence 9999999999999877553
No 32
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.2e-41 Score=268.33 Aligned_cols=139 Identities=27% Similarity=0.498 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCccC
Q 030794 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (171)
Q Consensus 5 ~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~ 84 (171)
.+.+||++|+++|++++++||++.+.+++++++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 46899999999999999999999997555677999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCc----------HHHhhccchhhHHHHHHHHHhh
Q 030794 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNY----------AWFLMNAGYEYGNTLHSCFLSV 153 (171)
Q Consensus 85 ~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~----------~~~~~~~~~~~~~~~~~~~~~~ 153 (171)
. +|.||+++|. ++|+|++||.+||.+|+++|.++ +.++.++..+|.++++++++.+
T Consensus 82 ~~~G~ICL~iL~-------------~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~y 148 (215)
T 1tte_A 82 SVTGAICLDILR-------------NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLY 148 (215)
T ss_dssp SSSSCCCSSTTT-------------CCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHS
T ss_pred CCCCEEECccCC-------------CCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 9 9999999997 89999999999999999999773 3478889999999999999999
Q ss_pred hhh
Q 030794 154 HSV 156 (171)
Q Consensus 154 ~~~ 156 (171)
|..
T Consensus 149 A~~ 151 (215)
T 1tte_A 149 ASE 151 (215)
T ss_dssp SCC
T ss_pred ccC
Confidence 864
No 33
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-40 Score=242.40 Aligned_cols=116 Identities=26% Similarity=0.528 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCC-ccCc
Q 030794 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM-WHPN 82 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~Hpn 82 (171)
+.+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||||
T Consensus 5 ~~a~~RL~kEl~~l~~~~~~~~~~~~~-~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 83 (125)
T 2fo3_A 5 GNANYRIQKELHNFLNNPPINCTLDVH-PNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTH 83 (125)
T ss_dssp ----CHHHHHHHHHHHSCCTTEEEEEC-TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeC-cchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCc
Confidence 478899999999999999999999985 88999999999999999999999999999999999999999999996 9999
Q ss_pred cCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCcHH
Q 030794 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAW 133 (171)
Q Consensus 83 V~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~~~ 133 (171)
|+.+|+||+++|. ++|+|+++|++||.+|+++|.++..
T Consensus 84 v~~~G~iCl~iL~-------------~~W~P~~~i~~vl~si~~ll~~p~~ 121 (125)
T 2fo3_A 84 VYSNGDICLSLLG-------------DDYNPSLSISGLVLSIISMLSSAKE 121 (125)
T ss_dssp BCTTSBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHC----
T ss_pred CCCCCEEEchhcC-------------CCCCCCCcHHHHHHHHHHHHhCccc
Confidence 9999999999997 8999999999999999999987654
No 34
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=1e-40 Score=251.15 Aligned_cols=139 Identities=27% Similarity=0.521 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCccC
Q 030794 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (171)
Q Consensus 5 ~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~ 84 (171)
.+.+||++|+++|++++++|+.+.+.+++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 80 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNID 80 (154)
T ss_dssp --CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCC
Confidence 367999999999999999999877666889999999998 9999999999999999999999999999999999999999
Q ss_pred CCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHhhh
Q 030794 85 PDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLSVH 154 (171)
Q Consensus 85 ~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 154 (171)
.+|.||+++|. .++|+|+++|.+||.+|+++|.+ ++.++.++..+|.++++++++++|
T Consensus 81 ~~G~iCl~iL~------------~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a 148 (154)
T 1c4z_D 81 EKGQVCLPVIS------------AENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYG 148 (154)
T ss_dssp TTCBBCCTTTS------------SSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC-
T ss_pred CCCEEECCCCC------------CCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhc
Confidence 99999999996 27899999999999999999966 344788899999999999999988
Q ss_pred hh
Q 030794 155 SV 156 (171)
Q Consensus 155 ~~ 156 (171)
..
T Consensus 149 ~~ 150 (154)
T 1c4z_D 149 EK 150 (154)
T ss_dssp --
T ss_pred cc
Confidence 63
No 35
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.1e-40 Score=247.99 Aligned_cols=133 Identities=28% Similarity=0.498 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCcc
Q 030794 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV 83 (171)
+.+.+||++|+++| ++++|+++...+++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 81 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcC
Confidence 57899999999999 57889999843588999999998 9999999999999999999999999999999999999999
Q ss_pred CCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHh
Q 030794 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLS 152 (171)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~ 152 (171)
+.+|.||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.++++++++.
T Consensus 82 ~~~G~iCl~iL~-------------~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 82 DLEGNVCLNILR-------------EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp CTTCBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred CCCCeEEcccch-------------hhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 999999999997 8899999999999999999966 3447888999999999998875
No 36
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.5e-40 Score=241.24 Aligned_cols=115 Identities=29% Similarity=0.566 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCC-ccCc
Q 030794 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM-WHPN 82 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~Hpn 82 (171)
+.+.+||++|+++|++++++|+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||||
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~-~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 97 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTIDVH-PSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTH 97 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEEEC-TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEEec-cccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCc
Confidence 468899999999999999999999985 88999999999999999999999999999999999999999999996 9999
Q ss_pred cCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCcH
Q 030794 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYA 132 (171)
Q Consensus 83 V~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~~ 132 (171)
|+.+|+||+++|. ++|+|+++|.+||.+|+++|.++.
T Consensus 98 v~~~G~ICl~iL~-------------~~WsP~~ti~~vL~si~sll~~p~ 134 (136)
T 2h2y_A 98 VYSNGDICLSVLG-------------DDYNPSLSISGLILSIISMLSSAK 134 (136)
T ss_dssp BCTTCCBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHSSSC
T ss_pred CCCCCEEECcccc-------------CCCCCCCcHHHHHHHHHHHHhCcC
Confidence 9999999999997 899999999999999999987654
No 37
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-39 Score=249.93 Aligned_cols=135 Identities=27% Similarity=0.455 Sum_probs=123.3
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCc
Q 030794 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (171)
++.+.+||++|+++| ++++|+++...+++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 24 ~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPN 100 (180)
T 2nvu_C 24 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 100 (180)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCC
Confidence 367899999999999 57889999843589999999998 999999999999999999999999999999999999999
Q ss_pred cCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHHHHHHh
Q 030794 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLHSCFLS 152 (171)
Q Consensus 83 V~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~ 152 (171)
|+.+|.||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.++++++++.
T Consensus 101 V~~~G~iCl~iL~-------------~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 101 IDLEGNVALNILR-------------EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp BCTTSBBCCGGGT-------------TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred CCCCCcEEccccc-------------ccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9999999999997 8899999999999999999976 3347888889999999998875
Q ss_pred h
Q 030794 153 V 153 (171)
Q Consensus 153 ~ 153 (171)
.
T Consensus 168 ~ 168 (180)
T 2nvu_C 168 G 168 (180)
T ss_dssp E
T ss_pred C
Confidence 3
No 38
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=4e-40 Score=247.45 Aligned_cols=135 Identities=27% Similarity=0.515 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCccC
Q 030794 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (171)
Q Consensus 5 ~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~ 84 (171)
.+.+||++|+++|+++ |+++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~ 77 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELN-NGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVD 77 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEc-cCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCc
Confidence 4678999999999874 7888886 78999999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHH-HHHhhcC----------cHHHhhccchhhHHHHHHHHHh
Q 030794 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRS-LSPGVLN----------YAWFLMNAGYEYGNTLHSCFLS 152 (171)
Q Consensus 85 ~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~-i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~ 152 (171)
. +|.||+++|. ++|+|+++|.+||.+ |++||.+ ++.++.++..+|.++++++++.
T Consensus 78 ~~~G~iCl~il~-------------~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~ 144 (152)
T 2onu_A 78 EASGSVCLDVIN-------------QTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKL 144 (152)
T ss_dssp TTTCBBCHHHHH-------------HHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CcCCeEeccccc-------------ccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 5 9999999997 889999999999999 6899865 4447888999999999999999
Q ss_pred hhhh
Q 030794 153 VHSV 156 (171)
Q Consensus 153 ~~~~ 156 (171)
+|..
T Consensus 145 ~a~~ 148 (152)
T 2onu_A 145 YASK 148 (152)
T ss_dssp HSCG
T ss_pred hccC
Confidence 8864
No 39
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-39 Score=239.01 Aligned_cols=110 Identities=36% Similarity=0.682 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEE--ecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCc--cC
Q 030794 6 ASLLLQKQLKDLCKNPVDGFSAG--LVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMW--HP 81 (171)
Q Consensus 6 a~~Rl~~El~~l~~~~~~~i~~~--~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~--Hp 81 (171)
+.+||++|+++|++++++|+++. + +++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++| ||
T Consensus 23 ~~~RL~kEl~~l~~~~~~gi~v~~~~-~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HP 101 (136)
T 2a7l_A 23 MQKRLQKELLALQNDPPPGMTLNEKS-VQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHP 101 (136)
T ss_dssp SCHHHHHHHHHHHHSCCTTCCCCTTC-CCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEee-CccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCc
Confidence 34999999999999999999965 5 4889999999999999999999999999999999999999999999998 99
Q ss_pred ccCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhc
Q 030794 82 NVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVL 129 (171)
Q Consensus 82 nV~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~ 129 (171)
||+.+|+||+++|. ++|+|+++|++||++|+++|.
T Consensus 102 NV~~~G~ICL~iL~-------------~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 102 HVYSNGHICLSILT-------------EDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp TBCTTCBBCCGGGT-------------TTCCTTSCHHHHHHHHHHHTC
T ss_pred cCCCCCeEEchhcC-------------CCCCCCCcHHHHHHHHHHHhC
Confidence 99999999999997 899999999999999999873
No 40
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.7e-40 Score=251.02 Aligned_cols=134 Identities=22% Similarity=0.504 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCccC
Q 030794 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (171)
Q Consensus 5 ~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~ 84 (171)
.+.+||++|+++|++ +|+++.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 25 ~a~~RL~kEl~~l~~---~g~~v~~~--ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~ 99 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE---SKHEVTIL--GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNID 99 (179)
T ss_dssp HHHHHHHHHHHHHHH---SSSCEEEE--EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHhcCc---CCCEEEEC--CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCC
Confidence 689999999999985 57888885 4789999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHH-HHHhhcC----------cHHHhhccchhhHHHHHHHHHh
Q 030794 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRS-LSPGVLN----------YAWFLMNAGYEYGNTLHSCFLS 152 (171)
Q Consensus 85 ~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~-i~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~ 152 (171)
. +|.||+++|. ++|+|+++|.+||.+ |+++|.+ ++.++.++..+|.+++++++++
T Consensus 100 ~~~G~ICL~iL~-------------~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~ 166 (179)
T 2z5d_A 100 EASGTVCLDVIN-------------QTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQK 166 (179)
T ss_dssp TTTCBBCHHHHH-------------HHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCeEeccccc-------------cCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9 9999999997 889999999999999 9999976 3447888999999999999999
Q ss_pred hhhh
Q 030794 153 VHSV 156 (171)
Q Consensus 153 ~~~~ 156 (171)
+|..
T Consensus 167 ~a~~ 170 (179)
T 2z5d_A 167 YATE 170 (179)
T ss_dssp HSSH
T ss_pred Hccc
Confidence 9874
No 41
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-39 Score=247.65 Aligned_cols=137 Identities=21% Similarity=0.422 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCccC
Q 030794 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVY 84 (171)
Q Consensus 5 ~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~ 84 (171)
++.+||++|+++|++++. ++ +. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~-~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~ 86 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YP-SDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVD 86 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EE-CSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CC-CCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCc
Confidence 578999999999999874 43 33 78999999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHH-HHhhcC----------cHHHhhccchhhHHHHHHHHHh
Q 030794 85 P-DGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSL-SPGVLN----------YAWFLMNAGYEYGNTLHSCFLS 152 (171)
Q Consensus 85 ~-~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i-~~ll~~----------~~~~~~~~~~~~~~~~~~~~~~ 152 (171)
. +|.||+++|. ++|+|+++|.+||.+| ++||.+ ++.++.++..+|.+++++++++
T Consensus 87 ~~~G~iCl~iL~-------------~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~ 153 (171)
T 1yf9_A 87 ERSGSVCLDVIN-------------QTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVST 153 (171)
T ss_dssp TTTCBBCHHHHH-------------HHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ccCCeEeccccc-------------cCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 5 9999999997 8899999999999997 788865 3447888999999999999999
Q ss_pred hhhhhhh
Q 030794 153 VHSVACH 159 (171)
Q Consensus 153 ~~~~~~~ 159 (171)
+|.....
T Consensus 154 ~a~~~~~ 160 (171)
T 1yf9_A 154 HATPQKA 160 (171)
T ss_dssp HCCHHHH
T ss_pred HcChhhH
Confidence 9876443
No 42
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=1.1e-38 Score=236.06 Aligned_cols=119 Identities=29% Similarity=0.450 Sum_probs=106.9
Q ss_pred CchHHHHHHHHHHHHHHhhC-CCCCeEEEecCCC--CceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecC
Q 030794 1 MAKSQASLLLQKQLKDLCKN-PVDGFSAGLVDES--NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (171)
Q Consensus 1 Ma~~~a~~Rl~~El~~l~~~-~~~~i~~~~~~~~--n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (171)
|++.++.+||++|+++|+++ +++|+++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 77778899999999999998 7889999986444 59999999999999999999999999999999999999999999
Q ss_pred CccCccCCC-Cce--eeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCcHH
Q 030794 78 MWHPNVYPD-GKV--CISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAW 133 (171)
Q Consensus 78 i~HpnV~~~-G~i--Cl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~~~ 133 (171)
+|||||+.+ |.| |+++| ++|+|+++|++||.+|+++|.++.+
T Consensus 82 i~HPnv~~~~G~i~~cL~~l--------------~~W~p~~~i~~vl~~i~~ll~~pn~ 126 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTL--------------RDWKRAYTMETLLLDLRKEMATPAN 126 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHH--------------HTCCTTCCHHHHHHHHHHHHTSHHH
T ss_pred cccCCEeCCCCEEeeecccC--------------CCCCCcCcHHHHHHHHHHHHcCCCC
Confidence 999999996 999 99988 4799999999999999999987655
No 43
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=5.8e-38 Score=267.54 Aligned_cols=144 Identities=29% Similarity=0.574 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCcc
Q 030794 4 SQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNV 83 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV 83 (171)
+.|.+||++|+++|++++++|+++.|. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 80 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPV-GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 80 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEE-TTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEc-CCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeecccccccc
Confidence 578999999999999999999999997 8899999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCc----------HHHhhccchhhHHHHHHHHHhh
Q 030794 84 YPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNY----------AWFLMNAGYEYGNTLHSCFLSV 153 (171)
Q Consensus 84 ~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~----------~~~~~~~~~~~~~~~~~~~~~~ 153 (171)
+.+|.||+++|. ++|+|+++|.+||.+|+++|.++ +.++.++..+|.++++++++++
T Consensus 81 ~~~G~iCl~il~-------------~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~ 147 (399)
T 4ddg_A 81 NSNGSISLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 147 (399)
T ss_dssp CTTCBBCCGGGT-------------TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCeEeCcccc-------------cCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 999999999997 89999999999999999999773 3378899999999999999999
Q ss_pred hhhhhhhH
Q 030794 154 HSVACHLM 161 (171)
Q Consensus 154 ~~~~~~~~ 161 (171)
|......-
T Consensus 148 a~~~v~~D 155 (399)
T 4ddg_A 148 AMGGSAYD 155 (399)
T ss_dssp TSCTTHHH
T ss_pred hccccchh
Confidence 87654443
No 44
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=7.2e-38 Score=236.71 Aligned_cols=119 Identities=26% Similarity=0.436 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHhhCCCCC-eEEEecCCCC--ceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCcc
Q 030794 4 SQASLLLQKQLKDLCKNPVDG-FSAGLVDESN--VFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~~~-i~~~~~~~~n--~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (171)
.++.+||++|+++|++++++| +++.+.+++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 103 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 103 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCcee
Confidence 578999999999999999988 7787755665 8999999999999999999999999999999999999999999999
Q ss_pred CccC-CCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCcHH
Q 030794 81 PNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAW 133 (171)
Q Consensus 81 pnV~-~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~~~ 133 (171)
|||+ .+|+||+++|.. .++|+|+++|++||++|+++|.+.++
T Consensus 104 PNV~~~~G~ICl~iL~~-----------~~~WsP~~ti~~vL~sI~~ll~~~pn 146 (160)
T 2a4d_A 104 NGVNSSNGVVDPRAISV-----------LAKWQNSYSIKVVLQELRRLMMSKEN 146 (160)
T ss_dssp TTBCTTTCBBCGGGSHH-----------HHTCCTTCCHHHHHHHHHHHHTSTTT
T ss_pred CCEECCCCEEehhhcCC-----------ccCCCccCcHHHHHHHHHHHHccCCC
Confidence 9999 599999999841 16899999999999999999976443
No 45
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=7.5e-38 Score=242.78 Aligned_cols=134 Identities=25% Similarity=0.428 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHhhCCCCCeEEEe---cCCCCce---EEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecC
Q 030794 4 SQASLLLQKQLKDLCKNPVDGFSAGL---VDESNVF---EWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~~~i~~~~---~~~~n~~---~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (171)
+.+.+||++||++|+ +++|+++.. .+++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 28 s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 104 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKK 104 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSC
T ss_pred cHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecC
Confidence 678999999999998 678999982 3589999 9999997 888999999999999999999999999999999
Q ss_pred CccCccCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcC----------cHHHhhccchhhHHHHH
Q 030794 78 MWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLN----------YAWFLMNAGYEYGNTLH 147 (171)
Q Consensus 78 i~HpnV~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~----------~~~~~~~~~~~~~~~~~ 147 (171)
+|||||+.+|.||+++|. ++|+|+++|.+||.+|+++|.+ ++.++.++..+|.++++
T Consensus 105 i~HPnV~~~G~iCl~iL~-------------~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar 171 (190)
T 3o2u_A 105 IFHPNIDLKGNVCLNILR-------------EDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVR 171 (190)
T ss_dssp CCCTTBCTTSBBCCGGGT-------------TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHH
T ss_pred cccCCCCCCCeEechhcc-------------CCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHH
Confidence 999999999999999997 8999999999999999999976 33478889999999999
Q ss_pred HHHHhh
Q 030794 148 SCFLSV 153 (171)
Q Consensus 148 ~~~~~~ 153 (171)
++++..
T Consensus 172 ~~~~~~ 177 (190)
T 3o2u_A 172 LTMSGG 177 (190)
T ss_dssp HHHBTC
T ss_pred HHHHhc
Confidence 998654
No 46
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=8.2e-38 Score=235.67 Aligned_cols=117 Identities=31% Similarity=0.475 Sum_probs=107.7
Q ss_pred hHHHHHHHHHHHHHHhhC-CCCCeEEEecCCC--CceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCc
Q 030794 3 KSQASLLLQKQLKDLCKN-PVDGFSAGLVDES--NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMW 79 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~-~~~~i~~~~~~~~--n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 79 (171)
+.++.+||++|+++|+++ +++|+++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 19 ~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~ 98 (156)
T 2q0v_A 19 IVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIE 98 (156)
T ss_dssp CCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred cchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccc
Confidence 356889999999999998 7889999986443 5999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCce---eeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCcHH
Q 030794 80 HPNVYPDGKV---CISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAW 133 (171)
Q Consensus 80 HpnV~~~G~i---Cl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~~~ 133 (171)
||||+.+|+| |+++|. .|+|+++|++||++|+++|.++.+
T Consensus 99 HPNV~~~G~icisCL~iL~--------------~WsP~~ti~~vL~sI~~ll~~Pn~ 141 (156)
T 2q0v_A 99 MSCVDNCGRVIKNNLHILK--------------NWNRNYTIETILISLRQEMLSSAN 141 (156)
T ss_dssp CTTBCTTSBBCGGGSHHHH--------------TCCTTCCHHHHHHHHHHHTTSTTT
T ss_pred cCCCccCCeEehhhccccc--------------CCCCcCcHHHHHHHHHHHHhCCCC
Confidence 9999999999 889884 499999999999999999987544
No 47
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=6.8e-38 Score=238.59 Aligned_cols=132 Identities=23% Similarity=0.484 Sum_probs=115.1
Q ss_pred CchHHHHHHHHHHHHHHhhCC------------CCCeEEEecCCCCceEEEEEEECCCCCCCC--CcEEEEEEEcCCCCC
Q 030794 1 MAKSQASLLLQKQLKDLCKNP------------VDGFSAGLVDESNVFEWSVSIIGPPDTLYE--GGFFNAIMTFPDNYP 66 (171)
Q Consensus 1 Ma~~~a~~Rl~~El~~l~~~~------------~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~--gg~f~~~i~fp~~YP 66 (171)
|+ +.+.+||++|+++|++++ +.++.+.+. ++|+++|+++|.||++|||+ ||.|+++|.||++||
T Consensus 5 Ms-~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~-~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP 82 (167)
T 4ds2_A 5 MK-NISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVD-TDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYP 82 (167)
T ss_dssp CC-CCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEE-ESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTT
T ss_pred cc-HHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeC-CCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCC
Confidence 55 578999999999999987 678999885 88999999999999999999 999999999999999
Q ss_pred CCCCeeEEecCCccCccCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHH-HHHHhhcC------------cHH
Q 030794 67 VSPPTVRFTSEMWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWR-SLSPGVLN------------YAW 133 (171)
Q Consensus 67 ~~pP~v~f~t~i~HpnV~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~-~i~~ll~~------------~~~ 133 (171)
++||+|+|.|++|||||+.+|.||+++|. ++|+|++++.++|+ .|++++.. ++.
T Consensus 83 ~~pP~v~f~t~i~HPnv~~~G~iCl~il~-------------~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~ 149 (167)
T 4ds2_A 83 HEPPTVRFVTPVYSPLVTGEGGICDRMVN-------------DFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARH 149 (167)
T ss_dssp TSCCEEEESSCCCCSSCCTTSCCCTHHHH-------------TTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHH
T ss_pred CCCCEEEEeCCcccccCCCCCEEEcccCc-------------CCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHH
Confidence 99999999999999999999999999997 89999999999765 56666643 333
Q ss_pred HhhccchhhHHHHH
Q 030794 134 FLMNAGYEYGNTLH 147 (171)
Q Consensus 134 ~~~~~~~~~~~~~~ 147 (171)
++.++..+|.++++
T Consensus 150 l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 150 YLEKFPQDFAARVR 163 (167)
T ss_dssp HHHHCHHHHHHHHT
T ss_pred HHHHCHHHHHHHHh
Confidence 56666666666665
No 48
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=6.9e-38 Score=242.21 Aligned_cols=138 Identities=21% Similarity=0.391 Sum_probs=121.2
Q ss_pred chHHHHHHHHHHHHHHhhCC---CCCeEEEecCCCCceEEEEEEECC-CCCCCCC-----------cEEEEEEEcCCCCC
Q 030794 2 AKSQASLLLQKQLKDLCKNP---VDGFSAGLVDESNVFEWSVSIIGP-PDTLYEG-----------GFFNAIMTFPDNYP 66 (171)
Q Consensus 2 a~~~a~~Rl~~El~~l~~~~---~~~i~~~~~~~~n~~~w~~~i~Gp-~~tpy~g-----------g~f~~~i~fp~~YP 66 (171)
++..+.+||++||++|++++ +.++++.+. ++|+++|+++|.|| ++|||+| |.|+++|.||++||
T Consensus 24 ~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~-~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP 102 (186)
T 1zuo_A 24 GSVQASDRLMKELRDIYRSQSYKTGIYSVELI-NDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFP 102 (186)
T ss_dssp CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEE-TTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEc-CCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCC
Confidence 34789999999999999998 688999987 78999999999997 9999998 89999999999999
Q ss_pred CCCCeeEEecCCccC-ccCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCcHH--HhhccchhhH
Q 030794 67 VSPPTVRFTSEMWHP-NVYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAW--FLMNAGYEYG 143 (171)
Q Consensus 67 ~~pP~v~f~t~i~Hp-nV~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~~~--~~~~~~~~~~ 143 (171)
++||+|+|.|++||| ||+.+|.|||++|. .++|+|+++|++||++|+++|.++++ .+..+..+|.
T Consensus 103 ~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~------------~~~WsP~~ti~~VL~sI~slL~~p~a~~~~~~~~~~Y~ 170 (186)
T 1zuo_A 103 FDPPFVRVVLPVLSGGYVLGGGALCMELLT------------KQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYN 170 (186)
T ss_dssp SSCCEEEEEESCEESTTBCGGGBBCCGGGS------------TTTCCTTSCHHHHHHHHHHHHHHTTCEECTTCCTTCCC
T ss_pred CCCCeEEEeCCccCCCccCCCCcEEeccCC------------CCCCCCcCcHHHHHHHHHHHHcCCChhHhhccCHHHHh
Confidence 999999999999999 69999999999996 27899999999999999999977444 3444556777
Q ss_pred HHHHHHHHh
Q 030794 144 NTLHSCFLS 152 (171)
Q Consensus 144 ~~~~~~~~~ 152 (171)
+.++.++.+
T Consensus 171 ~~~~~~~~~ 179 (186)
T 1zuo_A 171 LARAQQSYN 179 (186)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 766665544
No 49
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=250.28 Aligned_cols=147 Identities=27% Similarity=0.385 Sum_probs=125.9
Q ss_pred chHHHHHHHHHHHHHHhhCCCCC----eEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecC
Q 030794 2 AKSQASLLLQKQLKDLCKNPVDG----FSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (171)
Q Consensus 2 a~~~a~~Rl~~El~~l~~~~~~~----i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (171)
+++.+.+||++|+++|++++++| +.+.+. ++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+
T Consensus 73 ~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~-ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~ 151 (323)
T 3ceg_A 73 NSAARARRLAQEAVTLSTSLPLSSSSSVFVRCD-EERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETT 151 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEE-SSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCS
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCcccceeeccc-CCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEecc
Confidence 35789999999999999998875 445564 8899999999999999999999999999999999999999999999
Q ss_pred -----CccCccCCCCceeeccCCCCCCCCCCCCCCCCCCCccC-cHHHHHHHHHHhhcCcH--------------HHhhc
Q 030794 78 -----MWHPNVYPDGKVCISILHPPGDDPNGYELATERWTPVH-TAASVWRSLSPGVLNYA--------------WFLMN 137 (171)
Q Consensus 78 -----i~HpnV~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~-~l~~il~~i~~ll~~~~--------------~~~~~ 137 (171)
+|||||+.+|+|||++|+.+.+ ...++|+|++ +|.+||++|++||.+.. .++.+
T Consensus 152 ~g~~~ifHPNV~~~G~ICLsiL~~~~g------~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~ 225 (323)
T 3ceg_A 152 GGHSVRFNPNLYNDGKVCLSILNTWHG------RPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQ 225 (323)
T ss_dssp TTTTCCCBTTBCTTCBBCCGGGTSSCC------CGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHH
T ss_pred CCCcccccCCCCcCCeEechhhccccC------CCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhh
Confidence 9999999999999999963211 2236899999 89999999999996322 23455
Q ss_pred cchhhHHHHHHHHHhhhh
Q 030794 138 AGYEYGNTLHSCFLSVHS 155 (171)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~ 155 (171)
+..+|.++++.+++++|.
T Consensus 226 d~~~Y~~~vr~~t~k~A~ 243 (323)
T 3ceg_A 226 SSREYDGNIRQATVKWAM 243 (323)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHhh
Confidence 677888999999988764
No 50
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=236.04 Aligned_cols=119 Identities=26% Similarity=0.436 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHHHhhCCCCC-eEEEecCCCC--ceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCcc
Q 030794 4 SQASLLLQKQLKDLCKNPVDG-FSAGLVDESN--VFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWH 80 (171)
Q Consensus 4 ~~a~~Rl~~El~~l~~~~~~~-i~~~~~~~~n--~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (171)
.++.+||++|+++|++++++| +++.+.+++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 113 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 113 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccccc
Confidence 468999999999999999888 6777755654 9999999999999999999999999999999999999999999999
Q ss_pred CccC-CCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCcHH
Q 030794 81 PNVY-PDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAW 133 (171)
Q Consensus 81 pnV~-~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~~~ 133 (171)
|||+ .+|+||+++|+. .++|+|+++|++||++|+++|.+.++
T Consensus 114 PNV~~~~G~ICl~iL~~-----------~~~WsP~~ti~~vL~sI~~ll~~~pn 156 (170)
T 2hlw_A 114 NGVNSSNGVVDPRAISV-----------LAKWQNSYSIKVVLQELRRLMMSKEN 156 (170)
T ss_dssp SSBCSSSCBBCTTTCHH-----------HHTCCSSCCHHHHHHHHHHHHHSTTT
T ss_pred CCEeCCCCEEEhhhcCC-----------CCCCCccCcHHHHHHHHHHHHccCCC
Confidence 9999 699999998841 16899999999999999999976433
No 51
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.8e-36 Score=232.09 Aligned_cols=118 Identities=24% Similarity=0.520 Sum_probs=102.1
Q ss_pred hHHHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCc
Q 030794 3 KSQASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPN 82 (171)
Q Consensus 3 ~~~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~Hpn 82 (171)
++.+.+||++|+++|++++++||++.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ |||
T Consensus 12 ~~~a~~RL~kEl~~l~~~~~~~i~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~ 88 (187)
T 2f4w_A 12 PTTATQRLKQDYLRIKKDPVPYICAEPL-PSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGR 88 (187)
T ss_dssp --CHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSS
T ss_pred ccHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cce
Confidence 3568899999999999999999999986 8899999999999999999999999999999999999999999999 999
Q ss_pred cCCCCceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCcHH
Q 030794 83 VYPDGKVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAW 133 (171)
Q Consensus 83 V~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~~~ 133 (171)
|+.+|+||+++|+. +.+.|+|+++|.+||.+|+++|.++.+
T Consensus 89 ~~~~G~ICL~iL~~----------~~~~W~P~~ti~~vL~si~sll~~p~p 129 (187)
T 2f4w_A 89 FKCNTRLCLSITDF----------HPDTWNPAWSVSTILTGLLSFMVEKGP 129 (187)
T ss_dssp BCTTSCBC--------------------CCTTCCHHHHHHHHHHHHHSCCC
T ss_pred eccCCeEeeecccc----------CccCCCCcCcHHHHHHHHHHHhcCCCC
Confidence 99999999999941 128899999999999999999987665
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.93 E-value=5e-28 Score=181.53 Aligned_cols=99 Identities=17% Similarity=0.238 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCc----------EEEEEEEcCCCCCCCCCeeEE
Q 030794 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGG----------FFNAIMTFPDNYPVSPPTVRF 74 (171)
Q Consensus 5 ~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v~f 74 (171)
...+||++|++.|.+ ++.+. .+|++.|.+.+.||++|+|+|| .|.+++.||++||.+||+|+|
T Consensus 32 ~w~~RL~eE~k~L~k------~v~p~-k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F 104 (172)
T 2z6o_A 32 LWVQRLKEEYQSLIR------YVENN-KNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAV 104 (172)
T ss_dssp HHHHHHHHHHHHHHH------HHHHH-HHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBC
T ss_pred HHHHHHHHHHHHHHH------HhccC-ccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeee
Confidence 349999999999998 35554 6799999999999999999999 999999999999999999999
Q ss_pred ecC-CccCccCCCCceeeccCCCCCCCCCCCCCCCC---CCCccCcHHHHHH
Q 030794 75 TSE-MWHPNVYPDGKVCISILHPPGDDPNGYELATE---RWTPVHTAASVWR 122 (171)
Q Consensus 75 ~t~-i~HpnV~~~G~iCl~~l~~~~~~~~~~~~~~~---~W~p~~~l~~il~ 122 (171)
.+. +||||||.+|+|||++|. .. .|+|+++|.++|.
T Consensus 105 ~~~~~~hpnmY~~G~ICLdIL~------------kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 105 PELDGKTAKMYRGGKICLTDHF------------KPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp GGGTTTCSSBCTTSBBCCCTTH------------HHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCCCCCCCCCcEechhhc------------cccccccCCccCHHHHHh
Confidence 998 999999999999999994 13 4559999999994
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.74 E-value=5.2e-18 Score=127.82 Aligned_cols=110 Identities=21% Similarity=0.231 Sum_probs=87.5
Q ss_pred HHHHHHHHHHhhCCCCCeEE----EecCCCCceEEEEEEECCCCCCCCCcE---EEEEEEcCCCCCCCCCeeEEecC---
Q 030794 8 LLLQKQLKDLCKNPVDGFSA----GLVDESNVFEWSVSIIGPPDTLYEGGF---FNAIMTFPDNYPVSPPTVRFTSE--- 77 (171)
Q Consensus 8 ~Rl~~El~~l~~~~~~~i~~----~~~~~~n~~~w~~~i~Gp~~tpy~gg~---f~~~i~fp~~YP~~pP~v~f~t~--- 77 (171)
+|..+|+.++.+.-+ .+.. ... +|...++-+.+.|.-..+|+|+. |.+.|.||.+||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp-~L~p~t~~yt~-~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~ 108 (162)
T 3r3q_A 31 RTTFHDSLALLDNFH-SLRPRTRVFTH-SDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFD 108 (162)
T ss_dssp HHHHHHHHHHHHHCT-TEEEEEEEEEC-TTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCC
T ss_pred hHHHHHHHHHHHhCC-CCceeeeeEEc-CCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcc
Confidence 567788887755432 3332 223 56666777777777779999998 88999999999999999977541
Q ss_pred -------Cc-cCccCCCCceeeccCCCCCCCCCCCCCCCCCCCc-cCcHHHHHHHHHHhhcCcHH
Q 030794 78 -------MW-HPNVYPDGKVCISILHPPGDDPNGYELATERWTP-VHTAASVWRSLSPGVLNYAW 133 (171)
Q Consensus 78 -------i~-HpnV~~~G~iCl~~l~~~~~~~~~~~~~~~~W~p-~~~l~~il~~i~~ll~~~~~ 133 (171)
++ ||||+.+|+||++.| ++|+| +.+|.++|.+|+++|.++.+
T Consensus 109 m~~~~~~I~~hpnVD~~G~I~lpyL--------------~~W~p~~s~L~~ll~~l~~lf~ep~~ 159 (162)
T 3r3q_A 109 MNTISSSLPIQEYIDSNGWIALPIL--------------HAWDPAAMNLIMVVQELMSLLHEPPQ 159 (162)
T ss_dssp TTTSCTTSTHHHHBCTTSBBCCGGG--------------GSCCGGGCCHHHHHHHHHHTTSCCCC
T ss_pred ccccccccCCCCCCCCCCcEeCccc--------------ccCCCCcCcHHHHHHHHHHHhcCCCC
Confidence 77 999999999999999 46999 67999999999999876543
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.72 E-value=2.1e-19 Score=132.13 Aligned_cols=83 Identities=19% Similarity=0.353 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCc----------EEEEEEEcCCCCCCCCCeeEE
Q 030794 5 QASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGG----------FFNAIMTFPDNYPVSPPTVRF 74 (171)
Q Consensus 5 ~a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v~f 74 (171)
.-.+||++||+.|-+ +++. +.++-..|...+.||++|+|+|+ .|.+++.||.+||.+||+|+|
T Consensus 34 ~w~~RlkeEy~alI~------yv~~-nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~F 106 (168)
T 3kpa_A 34 KWTARLKEEYASLIT------YVEH-NKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIAL 106 (168)
T ss_dssp HHHHHHHHHHHHHHH------HHHH-HHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBC
T ss_pred HHHHHHHHHHHHHHH------HHHh-cccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeec
Confidence 467899999999843 1222 23344578899999999999999 999999999999999999999
Q ss_pred ecC-CccCccCCCCceeeccC
Q 030794 75 TSE-MWHPNVYPDGKVCISIL 94 (171)
Q Consensus 75 ~t~-i~HpnV~~~G~iCl~~l 94 (171)
.+. .+|||+|.+|+|||+++
T Consensus 107 p~ldgkt~kmYr~GkICLdIh 127 (168)
T 3kpa_A 107 PELEGKTVKMYRGGKICMTTH 127 (168)
T ss_dssp GGGTTTCSSEETTTEECCCTT
T ss_pred ccccCcCccccCCCcEEeccc
Confidence 995 89999999999999865
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.56 E-value=3.2e-15 Score=110.77 Aligned_cols=86 Identities=19% Similarity=0.326 Sum_probs=75.6
Q ss_pred CCCceEEEEEEECCCCCCCCCcEEEE--EEEcCCCCCCCCCeeEEecC------CccCccCCCCceeeccCCCCCCCCCC
Q 030794 32 ESNVFEWSVSIIGPPDTLYEGGFFNA--IMTFPDNYPVSPPTVRFTSE------MWHPNVYPDGKVCISILHPPGDDPNG 103 (171)
Q Consensus 32 ~~n~~~w~~~i~Gp~~tpy~gg~f~~--~i~fp~~YP~~pP~v~f~t~------i~HpnV~~~G~iCl~~l~~~~~~~~~ 103 (171)
..+++.|.++|. .+|+|+.|.+ .|-||.+||++||.| |.++ .+||||+.+|+||++.|.
T Consensus 50 ~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~-------- 116 (146)
T 3obq_A 50 SRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLH-------- 116 (146)
T ss_dssp TCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHH--------
T ss_pred hheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEeccccc--------
Confidence 358999999996 6899999995 888999999999999 7776 589999999999999994
Q ss_pred CCCCCCCCCc-cCcHHHHHHHHHHhhcCcHHHhh
Q 030794 104 YELATERWTP-VHTAASVWRSLSPGVLNYAWFLM 136 (171)
Q Consensus 104 ~~~~~~~W~p-~~~l~~il~~i~~ll~~~~~~~~ 136 (171)
.|++ ..+|.+++..+++.|...++++.
T Consensus 117 ------~W~~~~snL~~ll~~l~~~F~~epPv~s 144 (146)
T 3obq_A 117 ------EWKHPQSDLLGLIQVMIVVFGDEPPVFS 144 (146)
T ss_dssp ------TCCTTTCCHHHHHHHHHHHHHHSCSEEE
T ss_pred ------ccCCCCCCHHHHHHHHHHHHhhCCCCcc
Confidence 5998 78999999999999987777543
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.58 E-value=0.01 Score=41.85 Aligned_cols=68 Identities=16% Similarity=0.160 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEec
Q 030794 6 ASLLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTS 76 (171)
Q Consensus 6 a~~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 76 (171)
...+...|+..|..--+..+.+. .+....+.+.|..-.+..-+.-.+.+.|.||++||..||.|.+.+
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~---~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVL---SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEC---CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEEc---cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 35567889999987766656542 223456666665222222234478899999999999999997654
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=95.89 E-value=0.088 Score=37.42 Aligned_cols=68 Identities=10% Similarity=0.191 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEecCC-------CCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecC
Q 030794 7 SLLLQKQLKDLCKNPVDGFSAGLVDE-------SNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSE 77 (171)
Q Consensus 7 ~~Rl~~El~~l~~~~~~~i~~~~~~~-------~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 77 (171)
..+-..|+..|..--+..+.. .+. +....+.+.|....+ .-..-.+.+.|.+|++||..||.|.+.+.
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~--~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 12 YEIQCNELEAIRSIYMDDFTD--LTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHHHTTSSSSEEC--CSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred HHHHHHHHHHHHHHChhhhee--cccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 455678888888766555433 212 124567777763222 21234788999999999999999987653
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=95.85 E-value=0.077 Score=37.18 Aligned_cols=68 Identities=13% Similarity=0.203 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhhCCCCCeEEEecCC--CCceEEEEEEECCCCCCC--CCcEEEEEEEcCCCCCCCCCeeEEec
Q 030794 8 LLLQKQLKDLCKNPVDGFSAGLVDE--SNVFEWSVSIIGPPDTLY--EGGFFNAIMTFPDNYPVSPPTVRFTS 76 (171)
Q Consensus 8 ~Rl~~El~~l~~~~~~~i~~~~~~~--~n~~~w~~~i~Gp~~tpy--~gg~f~~~i~fp~~YP~~pP~v~f~t 76 (171)
.+...|+..|+.--+..+...-. . .+...+.+.+..+.+..- ..-.+.+.|.+|++||..+|.|.+.+
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~-~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKG-NGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECC-TTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecC-CCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 45788999888777666655321 1 234556666652222111 12478899999999999999998775
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=95.47 E-value=0.11 Score=39.42 Aligned_cols=88 Identities=13% Similarity=0.203 Sum_probs=62.9
Q ss_pred HHHHHHHHHHhhCCCCCeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCCccCccCCCC
Q 030794 8 LLLQKQLKDLCKNPVDGFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEMWHPNVYPDG 87 (171)
Q Consensus 8 ~Rl~~El~~l~~~~~~~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G 87 (171)
.+|.+|+.+|-=+. +... .+++....+++... .|....++|.++.+||.+||.+...-|. |
T Consensus 4 ~~li~Ei~~iGW~~-----l~~i-d~~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~------ 64 (186)
T 3zqs_A 4 SSLIEEIGTLGWDK-----LVYA-DTCFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYFVDFPV--P------ 64 (186)
T ss_dssp CSHHHHHHHHCGGG-----EEEE-CTTSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEECCCSS--C------
T ss_pred HHHHHHHHHhCCce-----eeee-cCCccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeEEcCCC--C------
Confidence 36788888882211 2223 35677888888733 3788899999999999999988655443 1
Q ss_pred ceeeccCCCCCCCCCCCCCCCCCCCccCcHHHHHHHHHHhhcCcHH
Q 030794 88 KVCISILHPPGDDPNGYELATERWTPVHTAASVWRSLSPGVLNYAW 133 (171)
Q Consensus 88 ~iCl~~l~~~~~~~~~~~~~~~~W~p~~~l~~il~~i~~ll~~~~~ 133 (171)
+ .-.|+|..+|.+++...+..+..-..
T Consensus 65 ------~-------------~~~w~~~ssL~~v~~qF~~~Le~lq~ 91 (186)
T 3zqs_A 65 ------F-------------CASWTPQSSLISIYSQFLAAIESLKA 91 (186)
T ss_dssp ------C-------------CCCCCTTCCHHHHHHHHHHHHHHTHH
T ss_pred ------c-------------ccccCCCccHHHHHHHHHHHHHHHHH
Confidence 0 14699999999999999988765444
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.17 E-value=0.045 Score=38.49 Aligned_cols=66 Identities=14% Similarity=0.161 Sum_probs=40.5
Q ss_pred HHHHHHHHHhhCCCC--CeEEEecCCCCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEe
Q 030794 9 LLQKQLKDLCKNPVD--GFSAGLVDESNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFT 75 (171)
Q Consensus 9 Rl~~El~~l~~~~~~--~i~~~~~~~~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 75 (171)
+...|+..|+.--+. .+...-....+...+.+.|.. .+..-..-.+.+.|.+|++||..||.|.+.
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 456788877765443 343321112234577777763 221111247899999999999999998543
No 61
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=93.69 E-value=0.32 Score=34.26 Aligned_cols=66 Identities=15% Similarity=0.098 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEecCCC------CceEEEEEEECCCC-C-CCCCcEEEEEEEcCCCCCCCCCeeEEe
Q 030794 7 SLLLQKQLKDLCKNPVDGFSAGLVDES------NVFEWSVSIIGPPD-T-LYEGGFFNAIMTFPDNYPVSPPTVRFT 75 (171)
Q Consensus 7 ~~Rl~~El~~l~~~~~~~i~~~~~~~~------n~~~w~~~i~Gp~~-t-py~gg~f~~~i~fp~~YP~~pP~v~f~ 75 (171)
..+...|+..|+.--+..+... +.+ ....+.+.|. +.+ + .-..-.+.+.|.||++||..||.|.+.
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~--~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 12 SQRQDHELQALEAIYGSDFQDL--RPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp HHHHHHHHHHHHHHTSSSEEEC--CCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEE
T ss_pred HHHHHHHHHHHHHHCcccceec--cCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEe
Confidence 4566788888887665555442 121 1345666665 222 1 001246889999999999999999774
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.64 E-value=0.36 Score=35.08 Aligned_cols=69 Identities=14% Similarity=0.080 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHhhCCC--CCeEEEec-----------C--CC--CceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCC
Q 030794 5 QASLLLQKQLKDLCKNPV--DGFSAGLV-----------D--ES--NVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPV 67 (171)
Q Consensus 5 ~a~~Rl~~El~~l~~~~~--~~i~~~~~-----------~--~~--n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~ 67 (171)
-...+-..|+..|..--+ .-+.+.-. + .+ ..+.+.+.|.- .+ + ...+.+.|.+|.+||.
T Consensus 14 ~~~e~Q~eElEaL~SIY~~~de~~v~d~~~~~~l~~~~~~~~~~~p~~~~~~i~l~~-~~-~--~~~i~L~v~lP~~YP~ 89 (154)
T 2daw_A 14 ESLQLQLLEMEMLFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQI-EE-P--KVKIDLQVTMPHSYPY 89 (154)
T ss_dssp HHHHHHHHHHHHHHHHCCSTTSEEESCGGGTHHHHHHHHTSCCSCCCCEEEEEEEEE-TT-T--TEEEEEEEEECSSTTS
T ss_pred hhHHHHHHHHHHHHHhCCCCCeEEEeccchHHHHHHhhcccccCCCCceEEEEEEec-CC-C--CceEEEEEEcCCCCCC
Confidence 344566778888877655 44544200 0 01 11345544432 11 1 2378999999999999
Q ss_pred CCCeeEEecC
Q 030794 68 SPPTVRFTSE 77 (171)
Q Consensus 68 ~pP~v~f~t~ 77 (171)
.+|.|...+.
T Consensus 90 ~~P~i~l~~~ 99 (154)
T 2daw_A 90 LALQLFGRSS 99 (154)
T ss_dssp SCCEEEEECS
T ss_pred CCCcEEEEeC
Confidence 9999976643
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=90.55 E-value=0.19 Score=36.32 Aligned_cols=25 Identities=24% Similarity=0.470 Sum_probs=21.3
Q ss_pred cEEEEEEEcCCCCCCCCCeeEEecC
Q 030794 53 GFFNAIMTFPDNYPVSPPTVRFTSE 77 (171)
Q Consensus 53 g~f~~~i~fp~~YP~~pP~v~f~t~ 77 (171)
-.+.+.|.+|.+||..||.|.+...
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999987653
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=32.07 E-value=34 Score=16.65 Aligned_cols=20 Identities=25% Similarity=0.255 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHhhCCCCCe
Q 030794 6 ASLLLQKQLKDLCKNPVDGF 25 (171)
Q Consensus 6 a~~Rl~~El~~l~~~~~~~i 25 (171)
-..||.-|+...+.+++.|.
T Consensus 6 eldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 6 ELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHhhhccCCCCCC
Confidence 35689999999999988764
No 65
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=29.61 E-value=1.5e+02 Score=21.81 Aligned_cols=44 Identities=16% Similarity=0.341 Sum_probs=32.0
Q ss_pred CCceEEEEEEECCCCCCCCCcEEEEEEEcCCCCCCCCCeeEEecCC
Q 030794 33 SNVFEWSVSIIGPPDTLYEGGFFNAIMTFPDNYPVSPPTVRFTSEM 78 (171)
Q Consensus 33 ~n~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 78 (171)
+..+.|.+.+.|+.+.-...-+=++.+.+.+.||. |...+..+.
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PP 73 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPP 73 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSS
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCC
Confidence 46779999999987655445566788888899974 665555553
No 66
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=29.18 E-value=24 Score=23.11 Aligned_cols=12 Identities=25% Similarity=0.329 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHH
Q 030794 6 ASLLLQKQLKDL 17 (171)
Q Consensus 6 a~~Rl~~El~~l 17 (171)
..||||+||+-|
T Consensus 63 QLKRvQRdlrGL 74 (87)
T 2rf4_B 63 QLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHhhcCC
Confidence 578999999987
No 67
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=25.71 E-value=43 Score=18.49 Aligned_cols=15 Identities=13% Similarity=0.215 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHhh
Q 030794 5 QASLLLQKQLKDLCK 19 (171)
Q Consensus 5 ~a~~Rl~~El~~l~~ 19 (171)
.-.+||.+|++.+++
T Consensus 28 ~~~~~~~~~~~~~~~ 42 (42)
T 3g9r_A 28 SKIKRIENEIKRIKK 42 (42)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 457899999998864
No 68
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=21.45 E-value=83 Score=23.73 Aligned_cols=25 Identities=20% Similarity=0.392 Sum_probs=21.5
Q ss_pred CCcEEEEEEEcCCCCCC-----CCCeeEEe
Q 030794 51 EGGFFNAIMTFPDNYPV-----SPPTVRFT 75 (171)
Q Consensus 51 ~gg~f~~~i~fp~~YP~-----~pP~v~f~ 75 (171)
+.|.|.|.-.+|--||. +||.|.|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 46899999999999998 78888765
Done!