BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030795
(171 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224093408|ref|XP_002309915.1| predicted protein [Populus trichocarpa]
gi|222852818|gb|EEE90365.1| predicted protein [Populus trichocarpa]
Length = 172
Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 137/175 (78%), Positives = 154/175 (88%), Gaps = 7/175 (4%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVS---VSTPAVHGHKMPVIRAQQVDV-SKESR 56
MAAMNSSVLACNYAISG+ GSSELNAKIVS V++ V G K+PVIRAQQ S+E +
Sbjct: 1 MAAMNSSVLACNYAISGT-GSSELNAKIVSMPAVASLVVSGPKLPVIRAQQTRADSREMK 59
Query: 57 GTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFA 116
++GRRAAM LA TLFT+A AA+S++A GVI+EYLE+SKANKELND+KRLATSGANFA
Sbjct: 60 ASEGRRAAMVYLAATLFTSAAAASSANA--GVIEEYLEKSKANKELNDKKRLATSGANFA 117
Query: 117 RAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
RA+TVQFGTCKFPENFTGCQDLAKQKKVPFISDDL LEC+GKDKYKCGSNVFWKW
Sbjct: 118 RAFTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 172
>gi|118488894|gb|ABK96256.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489284|gb|ABK96447.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 172
Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/175 (78%), Positives = 154/175 (88%), Gaps = 7/175 (4%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVS---VSTPAVHGHKMPVIRAQQVDV-SKESR 56
MAAMNSSVLACNYAISG+ GSSELNAKIVS V++ V G K+PVIRAQQ S+E +
Sbjct: 1 MAAMNSSVLACNYAISGT-GSSELNAKIVSMPAVASLVVCGPKLPVIRAQQTRADSREMK 59
Query: 57 GTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFA 116
++GRRAAM LA TLFT+A AA+S++A GVI+EYLE+SKANKELND+KRLATSGANFA
Sbjct: 60 ASEGRRAAMVYLAATLFTSAAAASSANA--GVIEEYLEKSKANKELNDKKRLATSGANFA 117
Query: 117 RAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
RA+TVQFGTCKFPENFTGCQDLAKQKKVPFISDDL LEC+GKDKYKCGSNVFWKW
Sbjct: 118 RAFTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 172
>gi|357464531|ref|XP_003602547.1| Photosystem I reaction center subunit N [Medicago truncatula]
gi|355491595|gb|AES72798.1| Photosystem I reaction center subunit N [Medicago truncatula]
gi|388492560|gb|AFK34346.1| unknown [Medicago truncatula]
Length = 172
Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 138/176 (78%), Positives = 159/176 (90%), Gaps = 9/176 (5%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVSV---STPAVHGHKMPVIRAQQVDV--SKES 55
MAAMNSSVLAC+YAISGS ELNAK++SV ++P V G K+P+I+AQQV + +KES
Sbjct: 1 MAAMNSSVLACSYAISGS----ELNAKLISVPSAASPGVSGIKLPLIKAQQVRIPEAKES 56
Query: 56 RGTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANF 115
R +DGRR A+ALLA TLFTTA +A++SSANAGVI+EYLE+SKANKELND+KRLATSGANF
Sbjct: 57 RASDGRRNALALLAATLFTTAVSASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANF 116
Query: 116 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFI++DLELEC+GKDKYKCGSNVFWKW
Sbjct: 117 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFITEDLELECEGKDKYKCGSNVFWKW 172
>gi|297797407|ref|XP_002866588.1| photosystem I reaction center subunit psi-N [Arabidopsis lyrata
subsp. lyrata]
gi|297312423|gb|EFH42847.1| photosystem I reaction center subunit psi-N [Arabidopsis lyrata
subsp. lyrata]
Length = 171
Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/175 (73%), Positives = 148/175 (84%), Gaps = 8/175 (4%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVSVSTPAVHGHK----MPVIRAQQVDVSKESR 56
MAAMNSSVL C+YAI+GS GS ELN K+ V++ G K MPVI+AQ+V V +
Sbjct: 1 MAAMNSSVLTCSYAIAGS-GSVELNQKVGLVNSSVGFGQKKQMIMPVIKAQRV-VGDDVD 58
Query: 57 GTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFA 116
G++GRR+AM LA TLF+TA A S+SANAGVIDEYLERSKANKELND+KRLATSGANFA
Sbjct: 59 GSNGRRSAMVFLAATLFSTA--AVSASANAGVIDEYLERSKANKELNDKKRLATSGANFA 116
Query: 117 RAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
RA+TVQFG+CKFPENFTGCQDLAKQKKVPFIS+DL LEC+GKDKY+CGSNVFWKW
Sbjct: 117 RAFTVQFGSCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYQCGSNVFWKW 171
>gi|15237593|ref|NP_201209.1| photosystem I reaction center subunit N [Arabidopsis thaliana]
gi|1709825|sp|P49107.2|PSAN_ARATH RecName: Full=Photosystem I reaction center subunit N,
chloroplastic; Short=PSI-N; Flags: Precursor
gi|1237124|gb|AAA93075.1| PSI-N [Arabidopsis thaliana]
gi|10176952|dbj|BAB10272.1| photosystem I reaction centre subunit psaN precursor [Arabidopsis
thaliana]
gi|17065518|gb|AAL32913.1| photosystem I reaction centre subunit psaN precursor [Arabidopsis
thaliana]
gi|20148531|gb|AAM10156.1| photosystem I reaction center subunit psaN precursor [Arabidopsis
thaliana]
gi|332010449|gb|AED97832.1| photosystem I reaction center subunit N [Arabidopsis thaliana]
Length = 171
Score = 254 bits (650), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 147/175 (84%), Gaps = 8/175 (4%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVSVSTPAVHGHK----MPVIRAQQVDVSKESR 56
MAAMNSSVL C+YAI+GS GS ELN K+ V++ G K MPVI+AQ+V V +
Sbjct: 1 MAAMNSSVLTCSYAIAGS-GSVELNQKVGLVNSSVGFGQKKQMIMPVIKAQRV-VGDDVD 58
Query: 57 GTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFA 116
G++GRR+AM LA TLF+TA A S+SANAGVIDEYLERSK NKELND+KRLATSGANFA
Sbjct: 59 GSNGRRSAMVFLAATLFSTA--AVSASANAGVIDEYLERSKTNKELNDKKRLATSGANFA 116
Query: 117 RAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
RA+TVQFG+CKFPENFTGCQDLAKQKKVPFIS+D+ LEC+GKDKYKCGSNVFWKW
Sbjct: 117 RAFTVQFGSCKFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWKW 171
>gi|224080971|ref|XP_002306249.1| predicted protein [Populus trichocarpa]
gi|118486634|gb|ABK95154.1| unknown [Populus trichocarpa]
gi|222855698|gb|EEE93245.1| predicted protein [Populus trichocarpa]
Length = 172
Score = 251 bits (642), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/175 (77%), Positives = 153/175 (87%), Gaps = 7/175 (4%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVS---VSTPAVHGHKMPVIRAQQVDV-SKESR 56
MAAMNSSVLACNYAISG+ GSSELNAKIVS V++P V G K+P+IRAQQ SKE +
Sbjct: 1 MAAMNSSVLACNYAISGT-GSSELNAKIVSMPAVASPVVSGPKLPIIRAQQARADSKEMK 59
Query: 57 GTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFA 116
++GRRAA+ LA T +AAA++SANAGVI++YLE+SKANKELND+KRLATSGANFA
Sbjct: 60 ASEGRRAALVYLAAT--LFTSAAAAASANAGVIEDYLEKSKANKELNDKKRLATSGANFA 117
Query: 117 RAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
RAYTVQFGTCKFPENFTGCQDLAKQKKVPFIS+DL LEC+GKDKYKCGSNVFWKW
Sbjct: 118 RAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW 172
>gi|449461859|ref|XP_004148659.1| PREDICTED: photosystem I reaction center subunit N,
chloroplastic-like [Cucumis sativus]
Length = 171
Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/174 (74%), Positives = 149/174 (85%), Gaps = 6/174 (3%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIV---SVSTPAVHGHKMPVIRAQQVDVSKESRG 57
MA MNSSVLACNYAISG AGS++LN+K+ SV++P V G+K+P IRAQQ V +
Sbjct: 1 MATMNSSVLACNYAISG-AGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQTKVPEAK-- 57
Query: 58 TDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFAR 117
DGRR A+ L +LF A AA++SSANAGVI++YLE+SKANKELND+KRLATSGANFAR
Sbjct: 58 NDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFAR 117
Query: 118 AYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
AYTV+FGTCKFPENFTGCQDLAKQKKVPFI+DDLELEC+GKDKYKCGSNVFWKW
Sbjct: 118 AYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW 171
>gi|449507490|ref|XP_004163047.1| PREDICTED: photosystem I reaction center subunit N,
chloroplastic-like [Cucumis sativus]
Length = 171
Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/174 (74%), Positives = 149/174 (85%), Gaps = 6/174 (3%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIV---SVSTPAVHGHKMPVIRAQQVDVSKESRG 57
MA MNSSVLACNYAISG AGS++LN+K+ SV++P V G+K+P IRAQQ V +
Sbjct: 1 MATMNSSVLACNYAISG-AGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAK-- 57
Query: 58 TDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFAR 117
DGRR A+ L +LF A AA++SSANAGVI++YLE+SKANKELND+KRLATSGANFAR
Sbjct: 58 NDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFAR 117
Query: 118 AYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
AYTV+FGTCKFPENFTGCQDLAKQKKVPFI+DDLELEC+GKDKYKCGSNVFWKW
Sbjct: 118 AYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW 171
>gi|255571379|ref|XP_002526638.1| Photosystem I reaction center subunit N, chloroplast precursor,
putative [Ricinus communis]
gi|223534030|gb|EEF35750.1| Photosystem I reaction center subunit N, chloroplast precursor,
putative [Ricinus communis]
Length = 169
Score = 249 bits (635), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/173 (76%), Positives = 145/173 (83%), Gaps = 6/173 (3%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELN--AKIVSVSTPAVHGHKMPVIRAQQVDVSKESRGT 58
MAAMNSSVLACNYAISG+A SSEL+ A + S P V G K+PVIRAQ+ + +S+
Sbjct: 1 MAAMNSSVLACNYAISGTA-SSELSKLASVPSAVFPTVSGPKLPVIRAQRAKPASDSKA- 58
Query: 59 DGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFARA 118
DGRRAAM L + TAAA SSANAGVI+EYLE+SKANKELND+KRLATSGANFARA
Sbjct: 59 DGRRAAM--LCLAATLFTTAAAVSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARA 116
Query: 119 YTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
YTVQFGTCKFPENFTGCQDLAKQKKVPFISDDL LEC+GKDKYKCGSNVFWKW
Sbjct: 117 YTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 169
>gi|351722715|ref|NP_001235206.1| uncharacterized protein LOC100499729 [Glycine max]
gi|255626111|gb|ACU13400.1| unknown [Glycine max]
Length = 167
Score = 248 bits (632), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 151/172 (87%), Gaps = 6/172 (3%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVSVSTPAVHGHKMPVIRAQ-QVDVSKESRGTD 59
MAAMNSSVLAC+YAISG+A SELN K+ SV+ A G+K+P+I+A+ +V +KES G
Sbjct: 1 MAAMNSSVLACSYAISGAA-CSELNGKVTSVAYVACSGYKLPLIKAEARVPKAKESEG-- 57
Query: 60 GRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFARAY 119
GRR A+ LLA TLFT+A + +S++A G+I++YLERSKANKELND+KRLAT+GANFARAY
Sbjct: 58 GRRGALVLLAATLFTSAASNSSANA--GIIEDYLERSKANKELNDKKRLATTGANFARAY 115
Query: 120 TVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
TV+FG+CKFPENFTGCQDLAKQKKVPF+SDDLELEC+GKDKYKCGSNVFWKW
Sbjct: 116 TVEFGSCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW 167
>gi|351725111|ref|NP_001236569.1| uncharacterized protein LOC100306036 [Glycine max]
gi|255627347|gb|ACU14018.1| unknown [Glycine max]
Length = 166
Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/172 (70%), Positives = 149/172 (86%), Gaps = 7/172 (4%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVSVSTPAVHGHKMPVIRAQ-QVDVSKESRGTD 59
MA MNSSVLAC+YAISG+A SELN K+ SV++ A G+K+P+I+ + +V +KES +
Sbjct: 1 MAGMNSSVLACSYAISGAA-CSELNGKVTSVASVASSGYKLPLIKCEARVPKAKES---E 56
Query: 60 GRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFARAY 119
GRR A+ LLA TLF +A + +S++A G+ID+YLERSKANKELND+KRLAT+GANFARAY
Sbjct: 57 GRRGALVLLAATLFISAASNSSANA--GIIDDYLERSKANKELNDKKRLATTGANFARAY 114
Query: 120 TVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
TV+FG+CKFPENFTGCQDLAKQKKVPF+SDDLELEC+GKDKYKCGSNVFWKW
Sbjct: 115 TVEFGSCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW 166
>gi|359476926|ref|XP_003631913.1| PREDICTED: photosystem I reaction center subunit N, chloroplastic
[Vitis vinifera]
Length = 173
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 151/176 (85%), Gaps = 8/176 (4%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVSV---STPAVHGHKMPVIRAQQVDVS--KES 55
MA++NSSVLACNYAISG AG+ ELN+K+VS+ ++PAV G K+P IRAQQ VS K+
Sbjct: 1 MASVNSSVLACNYAISG-AGAPELNSKLVSMPSAASPAVAGLKLPAIRAQQARVSDSKKW 59
Query: 56 RGTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANF 115
+GRRAA L+ + TAAASSSANAGVID+YLE+SKANKELND+KRLATSGANF
Sbjct: 60 GAGEGRRAA--LVYLAATLFTTAAASSSANAGVIDDYLEKSKANKELNDKKRLATSGANF 117
Query: 116 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
ARAYTVQFGTCKFPENFTGCQDLAK+KKVPF+S+DLELEC+G+DKYKCGSNVFWKW
Sbjct: 118 ARAYTVQFGTCKFPENFTGCQDLAKKKKVPFLSEDLELECEGRDKYKCGSNVFWKW 173
>gi|110631500|gb|ABG81095.1| photosystem I subunit N [Pelargonium x hortorum]
Length = 170
Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/176 (71%), Positives = 142/176 (80%), Gaps = 11/176 (6%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVSVSTPAVHGH--KMPVIRAQQVDVSKES--R 56
MA++NSSVLA N+ + GSA +L AK+ SVS+P H MPVIR++ S S R
Sbjct: 1 MASINSSVLASNFVLCGSA---DLTAKLGSVSSPVAHNQLKMMPVIRSELSTSSSSSSSR 57
Query: 57 GT-DGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANF 115
T DGRRAA+ LA TLF+TA A SSANAGVID+YLE+SKANKELND+KRL TSGANF
Sbjct: 58 ATIDGRRAALLCLAGTLFSTAVA---SSANAGVIDDYLEKSKANKELNDKKRLVTSGANF 114
Query: 116 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
ARAYTVQFG+CKFP NFTGCQDLAKQKKVPFISDDLELEC+GK+KYKCGSNVFWKW
Sbjct: 115 ARAYTVQFGSCKFPLNFTGCQDLAKQKKVPFISDDLELECEGKEKYKCGSNVFWKW 170
>gi|312281997|dbj|BAJ33864.1| unnamed protein product [Thellungiella halophila]
Length = 170
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/174 (68%), Positives = 144/174 (82%), Gaps = 7/174 (4%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVSVSTPAVHGHK---MPVIRAQQVDVSKESRG 57
MA MNSSVL C+YAISG A S+ELN K+ V++ G K M VI+AQ+V + G
Sbjct: 1 MATMNSSVLTCSYAISG-ASSAELNQKVGLVNSSVGFGQKKQTMSVIKAQRVG-GDDVDG 58
Query: 58 TDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFAR 117
++GRR+AM LA TLF++A +AS++A GVIDEYLE+SKANKELND+KRLATSGANFAR
Sbjct: 59 SNGRRSAMVFLAATLFSSAAVSASANA--GVIDEYLEKSKANKELNDKKRLATSGANFAR 116
Query: 118 AYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
A+TVQFG+CKFP+NFTGCQDLAKQKKVP+IS+DL LEC+GKDKYKCGSNVFWKW
Sbjct: 117 AFTVQFGSCKFPDNFTGCQDLAKQKKVPYISEDLALECEGKDKYKCGSNVFWKW 170
>gi|268612156|pdb|2WSC|N Chain N, Improved Model Of Plant Photosystem I
gi|268612174|pdb|2WSE|N Chain N, Improved Model Of Plant Photosystem I
gi|268612192|pdb|2WSF|N Chain N, Improved Model Of Plant Photosystem I
gi|28629385|gb|AAO49652.1| photosystem I-N subunit [Phaseolus vulgaris]
Length = 170
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/174 (70%), Positives = 148/174 (85%), Gaps = 7/174 (4%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVS---VSTPAVHGHKMPVIRAQQVDVSKESRG 57
M+AMNS+VLACNYA SG S+LNAK+ S V++P + K+P+I+A Q V+ ES+
Sbjct: 1 MSAMNSTVLACNYARSGC---SDLNAKLTSMPSVASPQLSALKLPLIKAHQAKVT-ESKS 56
Query: 58 TDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFAR 117
GRR+A+ LA TLFT A AA++SSANAGVI+EYLE+SK NKELND+KRLAT+GANFAR
Sbjct: 57 DQGRRSALVYLAATLFTAAAAASNSSANAGVIEEYLEKSKTNKELNDKKRLATTGANFAR 116
Query: 118 AYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
AYTV+FG+CKFPENFTGCQDLAKQKKVPF+SDDL+LEC+GKDKYKCGSNVFWKW
Sbjct: 117 AYTVEFGSCKFPENFTGCQDLAKQKKVPFLSDDLDLECEGKDKYKCGSNVFWKW 170
>gi|270311593|gb|ACZ72945.1| photosystem I reaction center subunit [Nicotiana tabacum]
Length = 168
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/173 (71%), Positives = 144/173 (83%), Gaps = 7/173 (4%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVSVSTPAVHGHKMPVIRAQQVDV--SKESRGT 58
MAAMNSSVLAC+YA+SG G+SEL +K S+++ +V K PVI+AQQ V S+ ++
Sbjct: 1 MAAMNSSVLACSYAVSG-IGASELTSKHASIASQSVQ--KWPVIKAQQSKVLDSEANKNQ 57
Query: 59 DGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFARA 118
GRR +ALL + A+++SSANAGVID+YLE+SKANKELND+KRLATSGANFARA
Sbjct: 58 AGRR--IALLGLAAALFTAASSNSSANAGVIDDYLEKSKANKELNDKKRLATSGANFARA 115
Query: 119 YTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
YTVQFGTCKFPENFTGCQDLAKQKKVPFISDDL LEC+GKDKYKCGSNVFWKW
Sbjct: 116 YTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 168
>gi|330318686|gb|AEC11003.1| photosystem I reaction center subunit N [Camellia sinensis]
Length = 174
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/178 (70%), Positives = 142/178 (79%), Gaps = 11/178 (6%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAK---IVSVSTPAVHGHKMPVIRAQQVDV----SK 53
MAAMNS+VLACNYAISG SSEL +K I S+++P HK+PVIR+QQ S
Sbjct: 1 MAAMNSNVLACNYAISGVGPSSELCSKLSPIPSLASPV--AHKLPVIRSQQTSTRFPDSN 58
Query: 54 ESRGTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGA 113
+ G DGRRAA+ LA AA++SSA+AGVI+EYLE+SKANKELND KRLAT+ A
Sbjct: 59 KIIGNDGRRAALFGLAAA--LFTAAASASSADAGVIEEYLEKSKANKELNDSKRLATTDA 116
Query: 114 NFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
NFARAYTVQFGTCKFPENFTGCQDLAKQKKV F+S+DLELECKGKDKYKCGSNVFWKW
Sbjct: 117 NFARAYTVQFGTCKFPENFTGCQDLAKQKKVKFLSEDLELECKGKDKYKCGSNVFWKW 174
>gi|293337345|gb|ADE42968.1| putative photosystem I reaction center subunit [Gardenia
jasminoides]
Length = 169
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/173 (72%), Positives = 141/173 (81%), Gaps = 6/173 (3%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVSVSTPAVHGHKMPVIRAQQVDVS--KESRGT 58
MA MNSSVLACNYAISG+ GSS+L K+VS + G K+PVI+AQQ VS KES +
Sbjct: 1 MATMNSSVLACNYAISGT-GSSDLTPKLVSAPSTVAVGQKLPVIKAQQTRVSESKESE-S 58
Query: 59 DGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFARA 118
GRRAAM LA AA++SSANAGVI+EYLE+SKANKELND+KRLAT+ ANFARA
Sbjct: 59 QGRRAAMLCLAAA--LFTAAASTSSANAGVIEEYLEKSKANKELNDKKRLATTDANFARA 116
Query: 119 YTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
YTVQFG CKFPENFTGCQDLAKQKKV F+SDDL+LE KGKDKYKCGSNVFWKW
Sbjct: 117 YTVQFGACKFPENFTGCQDLAKQKKVLFLSDDLDLERKGKDKYKCGSNVFWKW 169
>gi|186532722|ref|NP_001032133.2| photosystem I reaction center subunit N [Arabidopsis thaliana]
gi|332010450|gb|AED97833.1| photosystem I reaction center subunit N [Arabidopsis thaliana]
Length = 181
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 103/146 (70%), Positives = 119/146 (81%), Gaps = 8/146 (5%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVSVSTPAVHGHK----MPVIRAQQVDVSKESR 56
MAAMNSSVL C+YAI+GS GS ELN K+ V++ G K MPVI+AQ+V V +
Sbjct: 1 MAAMNSSVLTCSYAIAGS-GSVELNQKVGLVNSSVGFGQKKQMIMPVIKAQRV-VGDDVD 58
Query: 57 GTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFA 116
G++GRR+AM LA TLF+TA A S+SANAGVIDEYLERSK NKELND+KRLATSGANFA
Sbjct: 59 GSNGRRSAMVFLAATLFSTA--AVSASANAGVIDEYLERSKTNKELNDKKRLATSGANFA 116
Query: 117 RAYTVQFGTCKFPENFTGCQDLAKQK 142
RA+TVQFG+CKFPENFTGCQDLAKQK
Sbjct: 117 RAFTVQFGSCKFPENFTGCQDLAKQK 142
>gi|259490749|ref|NP_001159046.1| photosystem I reaction center subunit N [Zea mays]
gi|195644880|gb|ACG41908.1| photosystem I reaction center subunit N [Zea mays]
Length = 145
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/128 (69%), Positives = 105/128 (82%), Gaps = 7/128 (5%)
Query: 44 IRAQQVDVSKESRGTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELN 103
++ QQV V+ +SR RAA+ LA TAT A S A AGV DEYLE+SKANKELN
Sbjct: 25 MKQQQVQVAPQSR-----RAALLGLAAVFAVTATTAGS--AKAGVFDEYLEKSKANKELN 77
Query: 104 DQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKC 163
D+KR+ATS ANFARAYTV+FG+C+FP NFTGCQDLAKQKKVPF+SDDLE+EC+GK+K+KC
Sbjct: 78 DKKRMATSAANFARAYTVEFGSCQFPYNFTGCQDLAKQKKVPFLSDDLEIECEGKEKFKC 137
Query: 164 GSNVFWKW 171
GSNVFWKW
Sbjct: 138 GSNVFWKW 145
>gi|296088540|emb|CBI37531.3| unnamed protein product [Vitis vinifera]
Length = 127
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 120/171 (70%), Gaps = 44/171 (25%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVSVSTPAVHGHKMPVIRAQQVDVSKESRGTDG 60
MA++NSSVLACNYAIS +G
Sbjct: 1 MASVNSSVLACNYAIS------------------------------------------EG 18
Query: 61 RRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFARAYT 120
RRAA L+ + TAAASSSANAGVID+YLE+SKANKELND+KRLATSGANFARAYT
Sbjct: 19 RRAA--LVYLAATLFTTAAASSSANAGVIDDYLEKSKANKELNDKKRLATSGANFARAYT 76
Query: 121 VQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
VQFGTCKFPENFTGCQDLAK+KKVPF+S+DLELEC+G+DKYKCGSNVFWKW
Sbjct: 77 VQFGTCKFPENFTGCQDLAKKKKVPFLSEDLELECEGRDKYKCGSNVFWKW 127
>gi|194689962|gb|ACF79065.1| unknown [Zea mays]
gi|194690820|gb|ACF79494.1| unknown [Zea mays]
gi|194701756|gb|ACF84962.1| unknown [Zea mays]
gi|194702296|gb|ACF85232.1| unknown [Zea mays]
gi|195641532|gb|ACG40234.1| photosystem I reaction center subunit N [Zea mays]
gi|414878361|tpg|DAA55492.1| TPA: photosystem I reaction center subunit N [Zea mays]
Length = 145
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 98/113 (86%), Gaps = 3/113 (2%)
Query: 59 DGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFARA 118
+GRRAA+ LA TAT + SA A + DEYLE+SKANKELND+KRLATSGANFARA
Sbjct: 36 EGRRAALLGLAAVFAVTAT---TGSAKATIFDEYLEKSKANKELNDKKRLATSGANFARA 92
Query: 119 YTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
YTV+FG+C+FP NFTGCQDLAKQKKVPFISDDLE+EC+GK+K+KCGSNVFWKW
Sbjct: 93 YTVEFGSCQFPYNFTGCQDLAKQKKVPFISDDLEIECEGKEKFKCGSNVFWKW 145
>gi|357160594|ref|XP_003578814.1| PREDICTED: photosystem I reaction center subunit N,
chloroplastic-like [Brachypodium distachyon]
Length = 142
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/111 (77%), Positives = 95/111 (85%), Gaps = 2/111 (1%)
Query: 61 RRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFARAYT 120
RR+A+ LA + TA AS SA A V DEYLE+SK NKELND+KR ATSGANFARAYT
Sbjct: 34 RRSALLGLAAVI--AVTAGASGSARASVFDEYLEKSKLNKELNDKKRAATSGANFARAYT 91
Query: 121 VQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
VQFG+CKFP NFTGCQDLAKQKKVPFISDDLE+EC+GK+KYKCGSNVFWKW
Sbjct: 92 VQFGSCKFPYNFTGCQDLAKQKKVPFISDDLEIECEGKEKYKCGSNVFWKW 142
>gi|115487694|ref|NP_001066334.1| Os12g0189400 [Oryza sativa Japonica Group]
gi|77553228|gb|ABA96024.1| Photosystem I reaction centre subunit N, chloroplast precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|113648841|dbj|BAF29353.1| Os12g0189400 [Oryza sativa Japonica Group]
gi|215765179|dbj|BAG86876.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 149
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/130 (68%), Positives = 102/130 (78%), Gaps = 4/130 (3%)
Query: 42 PVIRAQQVDVSKESRGTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKE 101
PV + V V + GRRAA+ + L A A+ A AGV DEYLE+SKANKE
Sbjct: 24 PVPKRVHVAVPPKEEQGGGRRAAL----LGLAAVFAATAAGQAKAGVFDEYLEKSKANKE 79
Query: 102 LNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKY 161
LND+KRLATSGANFARAYTV+FG+C+FP NFTGCQDLAKQKKVPFISDDLE+EC+GK+KY
Sbjct: 80 LNDKKRLATSGANFARAYTVEFGSCQFPYNFTGCQDLAKQKKVPFISDDLEIECEGKEKY 139
Query: 162 KCGSNVFWKW 171
KCGSNVFWKW
Sbjct: 140 KCGSNVFWKW 149
>gi|218186547|gb|EEC68974.1| hypothetical protein OsI_37722 [Oryza sativa Indica Group]
Length = 144
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/147 (65%), Positives = 113/147 (76%), Gaps = 6/147 (4%)
Query: 28 IVSVSTPAVHGHKMPVIRAQQVDVS---KESRGTDGRRAAMALLAVTLFTTATAAASSSA 84
+ VST +V G K ++V V+ K + + GRRAA LL + ATAA A
Sbjct: 1 MAGVST-SVVGLKPAAAVPKRVHVAAPPKLEQQSGGRRAA--LLGLAAVFAATAAGQGQA 57
Query: 85 NAGVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKV 144
AGV DEYLE+SKANKELND+KRLATSGANFARAYTV+FG+C+FP NFTGCQDLAKQKKV
Sbjct: 58 RAGVFDEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCQFPYNFTGCQDLAKQKKV 117
Query: 145 PFISDDLELECKGKDKYKCGSNVFWKW 171
PFISDDLE+EC+GK+KYKCGSNVFWKW
Sbjct: 118 PFISDDLEIECEGKEKYKCGSNVFWKW 144
>gi|413916437|gb|AFW56369.1| photosystem I reaction center subunit N [Zea mays]
Length = 145
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/95 (80%), Positives = 88/95 (92%)
Query: 77 TAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQ 136
TA + SA AGV DEYLE+SKANKELND+KR+ATS ANFARAYTV+FG+C+FP NFTGCQ
Sbjct: 51 TATTAGSAKAGVFDEYLEKSKANKELNDKKRMATSAANFARAYTVEFGSCQFPYNFTGCQ 110
Query: 137 DLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
DLAKQKKVPF+SDDLE+EC+GK+K+KCGSNVFWKW
Sbjct: 111 DLAKQKKVPFLSDDLEIECEGKEKFKCGSNVFWKW 145
>gi|116779485|gb|ABK21304.1| unknown [Picea sitchensis]
gi|116782522|gb|ABK22539.1| unknown [Picea sitchensis]
gi|116785741|gb|ABK23841.1| unknown [Picea sitchensis]
gi|116786267|gb|ABK24046.1| unknown [Picea sitchensis]
gi|116790454|gb|ABK25621.1| unknown [Picea sitchensis]
gi|116791670|gb|ABK26066.1| unknown [Picea sitchensis]
gi|116794032|gb|ABK26981.1| unknown [Picea sitchensis]
gi|148906060|gb|ABR16189.1| unknown [Picea sitchensis]
gi|148906990|gb|ABR16639.1| unknown [Picea sitchensis]
gi|148907659|gb|ABR16958.1| unknown [Picea sitchensis]
gi|148908613|gb|ABR17416.1| unknown [Picea sitchensis]
gi|224285754|gb|ACN40592.1| unknown [Picea sitchensis]
gi|224286625|gb|ACN41017.1| unknown [Picea sitchensis]
Length = 173
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/142 (59%), Positives = 104/142 (73%), Gaps = 7/142 (4%)
Query: 30 SVSTPAVHGHKMPVIRAQQVDVSKESRGTDGRRAAMALLAVTLFTTATAAASSSANAGVI 89
S+S+ G + VIRA+ S +GRRAA+ L L + A S SANAG++
Sbjct: 39 SLSSLPKLGSRRLVIRAES-----SSGNANGRRAAVVGLGAALLSAI--ATSGSANAGLV 91
Query: 90 DEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISD 149
++ L +S ANK LND+KRLATSGAN ARAYTVQFGTC+ P NFTGCQDLAK K VPF+S+
Sbjct: 92 EDLLVKSAANKALNDKKRLATSGANIARAYTVQFGTCQVPYNFTGCQDLAKIKNVPFLSE 151
Query: 150 DLELECKGKDKYKCGSNVFWKW 171
D++LEC+GKDKYKCGSNVFWKW
Sbjct: 152 DMKLECEGKDKYKCGSNVFWKW 173
>gi|149242539|pdb|2O01|N Chain N, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
gi|303324976|pdb|3LW5|N Chain N, Improved Model Of Plant Photosystem I
Length = 85
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 75/85 (88%), Positives = 84/85 (98%)
Query: 87 GVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPF 146
GVI+EYLE+SK NKELND+KRLAT+GANFARAYTV+FG+CKFPENFTGCQDLAKQKKVPF
Sbjct: 1 GVIEEYLEKSKTNKELNDKKRLATTGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPF 60
Query: 147 ISDDLELECKGKDKYKCGSNVFWKW 171
+SDDL+LEC+GKDKYKCGSNVFWKW
Sbjct: 61 LSDDLDLECEGKDKYKCGSNVFWKW 85
>gi|3914466|sp|O65107.1|PSAN_MAIZE RecName: Full=Photosystem I reaction center subunit N,
chloroplastic; Short=PSI-N; Flags: Precursor
gi|2981214|gb|AAC26197.1| photosystem I complex PsaN subunit precursor, partial [Zea mays]
Length = 112
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 86/91 (94%)
Query: 81 SSSANAGVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAK 140
+ SA A + DEYLE+SKANKELND+KRLATSGANFARAYTV+FG+C+FP NFTGCQDLAK
Sbjct: 22 TGSAKATIFDEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCQFPYNFTGCQDLAK 81
Query: 141 QKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
QKKVPFISDDLE+EC+GK+K+KCGSNVFWKW
Sbjct: 82 QKKVPFISDDLEIECEGKEKFKCGSNVFWKW 112
>gi|37927472|gb|AAP69817.1| putative photosystem I reaction center subunit N precursor, partial
[Vitis vinifera]
Length = 85
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/83 (89%), Positives = 82/83 (98%)
Query: 89 IDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFIS 148
D+YLE+SKANKELND+KRLATSGANFARAYTVQFGTCKFPENFTGCQDLAK+KKVPF+S
Sbjct: 3 FDDYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKKKKVPFLS 62
Query: 149 DDLELECKGKDKYKCGSNVFWKW 171
+DLELEC+G+DKYKCGSNVFWKW
Sbjct: 63 EDLELECEGRDKYKCGSNVFWKW 85
>gi|400879|sp|P31093.1|PSAN_HORVU RecName: Full=Photosystem I reaction center subunit N,
chloroplastic; Short=PSI-N; Flags: Precursor
gi|19095|emb|CAA47056.1| photosystem I subunit N [Hordeum vulgare subsp. vulgare]
gi|326517280|dbj|BAK00007.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 145
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/106 (77%), Positives = 93/106 (87%)
Query: 66 ALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGT 125
ALL + ATAA++ SA A V DEYLE+SK NKELND+KR ATSGANFARAYTVQFG+
Sbjct: 40 ALLGLAAVFAATAASAGSARASVFDEYLEKSKLNKELNDKKRAATSGANFARAYTVQFGS 99
Query: 126 CKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGSNVFWKW 171
CKFP NFTGCQDLAKQKKVPFI+DDLE+EC+GK+K+KCGSNVFWKW
Sbjct: 100 CKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNVFWKW 145
>gi|148905772|gb|ABR16050.1| unknown [Picea sitchensis]
Length = 172
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 103/142 (72%), Gaps = 8/142 (5%)
Query: 30 SVSTPAVHGHKMPVIRAQQVDVSKESRGTDGRRAAMALLAVTLFTTATAAASSSANAGVI 89
S+S+ G + VIRA+ S +GRRAA+ L L + A S SANAG++
Sbjct: 39 SLSSLPKLGSRRLVIRAES-----SSGNANGRRAAVVGLGAALLSAI--ATSGSANAGLV 91
Query: 90 DEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISD 149
++ L +S ANK LND+KRLATSGAN ARAYTVQFGTC+ P NFTGCQDLAK K VPF+S+
Sbjct: 92 EDLLVKSAANKALNDKKRLATSGANIARAYTVQFGTCQVPYNFTGCQDLAKIKNVPFLSE 151
Query: 150 DLELECKGKDKYKCGSNVFWKW 171
D++LEC+GKDKY CGSNVFWKW
Sbjct: 152 DMKLECEGKDKY-CGSNVFWKW 172
>gi|326506464|dbj|BAJ86550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 86
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 80/84 (95%)
Query: 88 VIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFI 147
V DEYLE+SK NKELND+KR ATSGANFARAYTVQFG+CKFP NFTGCQDLAKQKKVPFI
Sbjct: 3 VFDEYLEKSKLNKELNDKKRAATSGANFARAYTVQFGSCKFPYNFTGCQDLAKQKKVPFI 62
Query: 148 SDDLELECKGKDKYKCGSNVFWKW 171
+DDLE+EC+GK+K+KCGSNVFWKW
Sbjct: 63 TDDLEIECEGKEKFKCGSNVFWKW 86
>gi|372477812|gb|AEX97100.1| photosystem I reaction center subunit, partial [Malus x domestica]
Length = 112
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/100 (82%), Positives = 91/100 (91%)
Query: 61 RRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFARAYT 120
RR A+ L TLF A AA++SSANAGVI++YLE+SKANKELND+KRLATSGANFARAYT
Sbjct: 13 RRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 72
Query: 121 VQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDK 160
V+FGTCKFPENFTGCQDLAKQKKVPF SDDLELEC+GKDK
Sbjct: 73 VEFGTCKFPENFTGCQDLAKQKKVPFTSDDLELECEGKDK 112
>gi|302784440|ref|XP_002973992.1| hypothetical protein SELMODRAFT_19706 [Selaginella moellendorffii]
gi|302803500|ref|XP_002983503.1| hypothetical protein SELMODRAFT_19703 [Selaginella moellendorffii]
gi|300148746|gb|EFJ15404.1| hypothetical protein SELMODRAFT_19703 [Selaginella moellendorffii]
gi|300158324|gb|EFJ24947.1| hypothetical protein SELMODRAFT_19706 [Selaginella moellendorffii]
Length = 82
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 73/82 (89%)
Query: 90 DEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISD 149
++ L +S ANKELND+KRL TSGAN ARAYTV+F TC+FP NFTGCQDLAK++ V F+SD
Sbjct: 1 EDLLAKSAANKELNDKKRLTTSGANLARAYTVEFNTCRFPYNFTGCQDLAKKQDVKFLSD 60
Query: 150 DLELECKGKDKYKCGSNVFWKW 171
DL+LEC+GKDKYKCGSNVFWKW
Sbjct: 61 DLKLECEGKDKYKCGSNVFWKW 82
>gi|74272701|gb|ABA01146.1| chloroplast photosystem I subunit N [Chlamydomonas incerta]
Length = 139
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Query: 56 RGTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANF 115
R + GRR + L A+ L T T A ANAGV+++ +S ANK LND+KRLATS AN
Sbjct: 25 RASAGRRELLGLGAIALGLTMTLA--PVANAGVVEDLQAKSSANKALNDKKRLATSYANL 82
Query: 116 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGS 165
AR+ TV GTC FPENF GC++LA K V FI++D+++EC+GK +CGS
Sbjct: 83 ARSRTVYDGTCTFPENFFGCEELAFNKGVKFIAEDIKIECEGKTAKECGS 132
>gi|227204189|dbj|BAH56946.1| AT5G64040 [Arabidopsis thaliana]
Length = 103
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 77/104 (74%), Gaps = 8/104 (7%)
Query: 1 MAAMNSSVLACNYAISGSAGSSELNAKIVSVSTPAVHGHK----MPVIRAQQVDVSKESR 56
MAAMNSSVL C+YAI+GS GS ELN K+ V++ G K MPVI+AQ+V V +
Sbjct: 1 MAAMNSSVLTCSYAIAGS-GSVELNQKVGLVNSSVGFGQKKQMIMPVIKAQRV-VGDDVD 58
Query: 57 GTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANK 100
G++GRR+AM LA TLF+TA A S+SANAGVIDEYLERSK NK
Sbjct: 59 GSNGRRSAMVFLAATLFSTA--AVSASANAGVIDEYLERSKTNK 100
>gi|12744797|gb|AAK06774.1|AF323725_1 PsaN precursor [Chlamydomonas reinhardtii]
Length = 139
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Query: 56 RGTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANF 115
R + GRR + L A+ L T T A ANAGV+++ +S ANK LND+KRLATS AN
Sbjct: 25 RASAGRRELLGLGALALGLTMTLA--PVANAGVVEDLQAKSAANKALNDKKRLATSYANL 82
Query: 116 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGS 165
AR+ TV GTC FPENF GC++LA K V FI++D+++EC+GK +CGS
Sbjct: 83 ARSRTVYDGTCTFPENFFGCEELAFNKGVKFIAEDIKIECEGKTAKECGS 132
>gi|159487379|ref|XP_001701700.1| photosystem I reaction center subunit N [Chlamydomonas reinhardtii]
gi|158280919|gb|EDP06675.1| photosystem I reaction center subunit N [Chlamydomonas reinhardtii]
Length = 139
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Query: 56 RGTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANF 115
R + GRR + L A+ L T T A ANAGV+ + +S ANK LND+KRLATS AN
Sbjct: 25 RASAGRRELLGLGALALGLTMTLA--PVANAGVVSDLQAKSAANKALNDKKRLATSYANL 82
Query: 116 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYKCGS 165
AR+ TV GTC FPENF GC++LA K V FI++D+++EC+GK +CGS
Sbjct: 83 ARSRTVYDGTCTFPENFFGCEELAFNKGVKFIAEDIKIECEGKTAKECGS 132
>gi|302844261|ref|XP_002953671.1| photosystem I reaction center subunit N, chloroplast precursor
[Volvox carteri f. nagariensis]
gi|11134150|sp|Q9SBN5.1|PSAN_VOLCA RecName: Full=Photosystem I reaction center subunit N,
chloroplastic; Short=PSI-N; Flags: Precursor
gi|5902586|gb|AAD55563.1|AF110781_1 photosystem I reaction center subunit PSAN precursor [Volvox
carteri f. nagariensis]
gi|300261080|gb|EFJ45295.1| photosystem I reaction center subunit N, chloroplast precursor
[Volvox carteri f. nagariensis]
Length = 139
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 61/78 (78%)
Query: 88 VIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFI 147
V+++ L +S ANK LN++KRLATS AN AR+ TV GTC+FPENF GC++LA K V +I
Sbjct: 55 VVEDLLAKSAANKALNNKKRLATSYANLARSRTVYDGTCQFPENFFGCEELAFNKGVKYI 114
Query: 148 SDDLELECKGKDKYKCGS 165
++DL++EC+GKD CGS
Sbjct: 115 AEDLKIECEGKDAKSCGS 132
>gi|412992925|emb|CCO16458.1| unknown [Bathycoccus prasinos]
Length = 100
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 57/74 (77%)
Query: 84 ANAGVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKK 143
A+AG+ ++ L S+ANKE+ND+KR TS ANFAR+ TV G+CKFP+N GC++ A+
Sbjct: 3 AHAGLTEDLLASSEANKEMNDKKRAMTSSANFARSRTVTDGSCKFPDNLLGCENAAEFGN 62
Query: 144 VPFISDDLELECKG 157
V F+SDD++LEC+G
Sbjct: 63 VKFLSDDIKLECEG 76
>gi|145347364|ref|XP_001418138.1| psaN, PSI-N, photosystem I polypeptide [Ostreococcus lucimarinus
CCE9901]
gi|144578367|gb|ABO96431.1| psaN, PSI-N, photosystem I polypeptide [Ostreococcus lucimarinus
CCE9901]
Length = 139
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 5/106 (4%)
Query: 61 RRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFARAYT 120
+ A++ L AV A + + A A + + L +++ANKELND+KR ATS ANF R+ T
Sbjct: 26 KAASLGLAAVV----AVSLQVAPARADLTSDLLAKTEANKELNDKKRAATSSANFERSRT 81
Query: 121 VQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKYK-CGS 165
V G C FP+N GC++ A++ V F+SDDL++EC+G D K C S
Sbjct: 82 VTDGFCNFPQNIFGCENAAEKGDVKFLSDDLKVECEGTDAGKICAS 127
>gi|307104372|gb|EFN52626.1| hypothetical protein CHLNCDRAFT_32470 [Chlorella variabilis]
Length = 145
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 57/84 (67%)
Query: 84 ANAGVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKK 143
A A + + + +S NK L+D++RLATS +NFAR+ TV GTCKFP N+ GC A
Sbjct: 55 AKADLTSDLMAKSSENKALHDKQRLATSYSNFARSRTVSDGTCKFPGNWFGCDIGAVAGD 114
Query: 144 VPFISDDLELECKGKDKYKCGSNV 167
V F++DD++LEC GK+ KC SN+
Sbjct: 115 VKFVADDIKLECTGKEAGKCASNM 138
>gi|303280219|ref|XP_003059402.1| photosystem I subunit N, chloroplast precursor [Micromonas pusilla
CCMP1545]
gi|226459238|gb|EEH56534.1| photosystem I subunit N, chloroplast precursor [Micromonas pusilla
CCMP1545]
Length = 155
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 84 ANAGVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKK 143
A A + + L RS+ANKELND+KR TS ANF R+ TV G C+FP+NF GC+ +
Sbjct: 61 AKADLTSDLLARSEANKELNDKKRALTSSANFERSRTVTDGVCEFPKNFFGCEIASSNGG 120
Query: 144 VPFISDDLELECKG-KDKYKCGS 165
V F+SDD ++EC+G +D C S
Sbjct: 121 VAFLSDDKDIECEGTRDGKVCAS 143
>gi|308804662|ref|XP_003079643.1| PSAN_VOLCA Photosystem I reaction centre subunit N, chl (ISS)
[Ostreococcus tauri]
gi|116058099|emb|CAL53288.1| PSAN_VOLCA Photosystem I reaction centre subunit N, chl (ISS)
[Ostreococcus tauri]
Length = 131
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 91 EYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDD 150
+ L R++ANK LNDQKR ATS ANF R+ V G C+FP+N GCQ+ A++ V F+SDD
Sbjct: 44 DLLARTEANKSLNDQKRAATSSANFERSRLVTDGFCQFPQNIFGCQNAAEKGSVKFLSDD 103
Query: 151 LELECKGK-DKYKCGS 165
+ +EC+G D C S
Sbjct: 104 MAIECEGTADGKTCSS 119
>gi|255074285|ref|XP_002500817.1| photosystem I subunit N, chloroplast precursor [Micromonas sp.
RCC299]
gi|226516080|gb|ACO62075.1| photosystem I subunit N, chloroplast precursor [Micromonas sp.
RCC299]
Length = 157
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 84 ANAGVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKK 143
A A + + L R++ANKELND+KR ATS ANF R+ TV G CKFP+N GC+ +
Sbjct: 63 AKADLTSDLLARTEANKELNDKKRAATSSANFERSRTVTDGVCKFPQNMLGCEIASSTGD 122
Query: 144 VPFISDDLELECKG-KDKYKCGS 165
V F+S D LEC+G +D C S
Sbjct: 123 VAFLSADKALECEGTRDGKVCAS 145
>gi|125578737|gb|EAZ19883.1| hypothetical protein OsJ_35469 [Oryza sativa Japonica Group]
Length = 107
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 61/130 (46%), Gaps = 46/130 (35%)
Query: 42 PVIRAQQVDVSKESRGTDGRRAAMALLAVTLFTTATAAASSSANAGVIDEYLERSKANKE 101
PV + V V + GRRAA+ + L A A+ A AGV DEYLE+SKANK
Sbjct: 24 PVPKRVHVAVPPKEEQGGGRRAAL----LGLAAVFAATAAGQAKAGVFDEYLEKSKANK- 78
Query: 102 LNDQKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECKGKDKY 161
KVPFISDDLE+EC+GK+KY
Sbjct: 79 -----------------------------------------KVPFISDDLEIECEGKEKY 97
Query: 162 KCGSNVFWKW 171
KCGSNVFWKW
Sbjct: 98 KCGSNVFWKW 107
>gi|219877910|gb|ACL50605.1| chloroplast photosystem I subunit N [Agrostis canina]
Length = 23
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/23 (82%), Positives = 23/23 (100%)
Query: 149 DDLELECKGKDKYKCGSNVFWKW 171
DDLE+EC+GK+K+KCGSNVFWKW
Sbjct: 1 DDLEIECEGKEKFKCGSNVFWKW 23
>gi|357455887|ref|XP_003598224.1| hypothetical protein MTR_3g008630 [Medicago truncatula]
gi|355487272|gb|AES68475.1| hypothetical protein MTR_3g008630 [Medicago truncatula]
Length = 124
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Query: 27 KIVSVSTPAVHGHKM--PVIRAQQVDVSKESRGTDGRRAAMALLAVTLFTTATAAASSSA 84
K S + AVH K P +R+ ++ GRR L +++ ATA +
Sbjct: 11 KYTSSNVQAVHNRKQANPTLRSTNMEF--------GRRG----LVLSIVIAATATQDPES 58
Query: 85 NAGVIDEYLERSKANKELNDQKRLATSGANFARAYTVQF 123
++ +YL++++ NKE ND++R+ +N+ R Y F
Sbjct: 59 RTLLLQKYLKKTQENKEKNDKERV---DSNYKRNYKDYF 94
>gi|225375575|ref|ZP_03752796.1| hypothetical protein ROSEINA2194_01200 [Roseburia inulinivorans DSM
16841]
gi|225212554|gb|EEG94908.1| hypothetical protein ROSEINA2194_01200 [Roseburia inulinivorans DSM
16841]
Length = 283
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 105 QKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISD 149
++++A S A + ++YTV+ TC F EN T +L KQ+KV + D
Sbjct: 41 RRQVAFSEAVYEKSYTVEGVTCYFAENLTRAYELLKQRKVALMID 85
>gi|242038245|ref|XP_002466517.1| hypothetical protein SORBIDRAFT_01g009180 [Sorghum bicolor]
gi|241920371|gb|EER93515.1| hypothetical protein SORBIDRAFT_01g009180 [Sorghum bicolor]
Length = 121
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 67 LLAVTLFTTATAAASSSANAGVIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTC 126
LL + T A S + ++ EYL++S+ NKE ND++RL + R Y FG
Sbjct: 38 LLTLLTSTAAIPPGGSESRKALLQEYLKKSEENKEKNDKERLDDY---YKRNYKDYFGLI 94
Query: 127 KFP 129
+ P
Sbjct: 95 EGP 97
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.126 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,327,229,131
Number of Sequences: 23463169
Number of extensions: 80365970
Number of successful extensions: 224434
Number of sequences better than 100.0: 70
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 224310
Number of HSP's gapped (non-prelim): 72
length of query: 171
length of database: 8,064,228,071
effective HSP length: 131
effective length of query: 40
effective length of database: 9,285,520,228
effective search space: 371420809120
effective search space used: 371420809120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)