Query 030795
Match_columns 171
No_of_seqs 30 out of 32
Neff 1.9
Searched_HMMs 13730
Date Mon Mar 25 07:00:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030795.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030795hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2diia1 a.240.1.1 (A:8-55) TFI 48.2 0.87 6.3E-05 29.0 -1.5 25 95-119 2-26 (48)
2 d1ywfa1 c.45.1.5 (A:4-275) Pho 27.2 28 0.0021 25.3 3.8 26 81-106 175-200 (272)
3 d2a6aa1 c.55.1.9 (A:1-103) Hyp 26.1 16 0.0012 23.4 2.0 44 88-148 40-90 (103)
4 d1okja1 c.55.1.9 (A:1-106) Hyp 21.0 19 0.0014 23.3 1.6 28 121-148 56-90 (106)
5 d1vjpa1 c.2.1.3 (A:0-209,A:317 13.6 28 0.0021 26.7 1.1 19 134-152 193-211 (275)
6 d1u1ia1 c.2.1.3 (A:1-227,A:333 12.3 35 0.0025 26.3 1.3 21 132-152 207-227 (287)
7 d2c9aa1 b.1.1.4 (A:184-279) Re 10.2 38 0.0028 19.8 0.7 24 147-171 15-38 (96)
8 d1u8fo1 c.2.1.3 (O:3-151,O:316 9.6 36 0.0027 24.3 0.5 13 148-160 89-101 (169)
9 d1h3da1 c.94.1.1 (A:5-224) ATP 9.3 27 0.002 26.0 -0.3 37 106-143 121-158 (220)
10 d1ve4a1 c.94.1.1 (A:1-206) ATP 9.3 20 0.0014 26.6 -1.2 19 101-119 104-122 (206)
No 1
>d2diia1 a.240.1.1 (A:8-55) TFIIH basal transcription factor complex p62 subunit, BTF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.17 E-value=0.87 Score=29.02 Aligned_cols=25 Identities=32% Similarity=0.549 Sum_probs=19.0
Q ss_pred Hhhhhhhhhhhhhhhcccccchhhe
Q 030795 95 RSKANKELNDQKRLATSGANFARAY 119 (171)
Q Consensus 95 KSkaNKelNDKkRlaTS~aNfaRay 119 (171)
|.|+||||.+|-||.......-.-|
T Consensus 2 k~k~~keLeEKnr~L~enp~L~qLY 26 (48)
T d2diia1 2 KRKANKELEEKNRMLQEDPVLFQLY 26 (48)
T ss_dssp CCCSCHHHHHHHHHHHHCHHHHHHH
T ss_pred chhHHHHHHHHhhccccCHHHHHHH
Confidence 5789999999999987665544333
No 2
>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=27.24 E-value=28 Score=25.33 Aligned_cols=26 Identities=12% Similarity=0.247 Sum_probs=19.4
Q ss_pred ccccchhhHHHHHHHhhhhhhhhhhh
Q 030795 81 SSSANAGVIDEYLERSKANKELNDQK 106 (171)
Q Consensus 81 a~~A~Agvi~dyL~KSkaNKelNDKk 106 (171)
.+..+..+++||+.-.....+.+++.
T Consensus 175 lGV~~e~I~~DYllSn~~~~~~~~~~ 200 (272)
T d1ywfa1 175 VGLDRDVIVADYLRSNDSVPQLRARI 200 (272)
T ss_dssp TTCCHHHHHHHHHGGGGGHHHHHHHH
T ss_pred cCCCHHHHHHHHHhhhhhhHHHHHHH
Confidence 56778999999998776666655543
No 3
>d2a6aa1 c.55.1.9 (A:1-103) Hypothetical protein TM0874 {Thermotoga maritima [TaxId: 2336]}
Probab=26.08 E-value=16 Score=23.37 Aligned_cols=44 Identities=20% Similarity=0.336 Sum_probs=29.4
Q ss_pred hHHHHHHHhhhhhhhhhhhhhhcccccchhheeeeecccccCCCccc-------hhhHhhcCCCcccc
Q 030795 88 VIDEYLERSKANKELNDQKRLATSGANFARAYTVQFGTCKFPENFTG-------CQDLAKQKKVPFIS 148 (171)
Q Consensus 88 vi~dyL~KSkaNKelNDKkRlaTS~aNfaRaytv~fG~ckfP~Nf~G-------Cq~lA~~k~V~Fls 148 (171)
+|+++|++++ -++.|=+. +....+|..||| .+-++...++|++.
T Consensus 40 ~i~~~l~~~~--~~~~di~~---------------i~v~~GPGsfTglRig~s~akgla~~~~ip~~g 90 (103)
T d2a6aa1 40 VVKKLLDELD--LKVKDLDV---------------VGVGIGPGGLTGLRVGIATVVGLVSPYDIPVAP 90 (103)
T ss_dssp HHHHHHHHHT--CCGGGCSE---------------EEEECCSSCHHHHHHHHHHHHHHHGGGTCCEEE
T ss_pred HHHHHHHHcC--CCHHHhHH---------------HhhcCCCCcchhHHHHHHHHHHHHHHcCCCEEE
Confidence 4788887644 34445333 446789999999 45567777777764
No 4
>d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]}
Probab=20.99 E-value=19 Score=23.27 Aligned_cols=28 Identities=32% Similarity=0.475 Sum_probs=21.4
Q ss_pred eeecccccCCCccch-------hhHhhcCCCcccc
Q 030795 121 VQFGTCKFPENFTGC-------QDLAKQKKVPFIS 148 (171)
Q Consensus 121 v~fG~ckfP~Nf~GC-------q~lA~~k~V~Fls 148 (171)
..+..+.+|..|||- +-++...++|++.
T Consensus 56 ~~i~v~~GPGsfTglRig~s~akgla~~~~ip~~~ 90 (106)
T d1okja1 56 NALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIG 90 (106)
T ss_dssp CEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEeeccCccccchHHHHHHHHHHHHcCCCEEE
Confidence 345678999999995 5567778888765
No 5
>d1vjpa1 c.2.1.3 (A:0-209,A:317-381) Hypothetical protein TM1419 {Thermotoga maritima [TaxId: 2336]}
Probab=13.56 E-value=28 Score=26.73 Aligned_cols=19 Identities=26% Similarity=0.361 Sum_probs=17.7
Q ss_pred chhhHhhcCCCcccccCcc
Q 030795 134 GCQDLAKQKKVPFISDDLE 152 (171)
Q Consensus 134 GCq~lA~~k~V~FlsdDl~ 152 (171)
+-+++|++++||.+-||++
T Consensus 193 al~ela~~~gvPi~GdD~K 211 (275)
T d1vjpa1 193 AFVELAKENNLVVFGDDGS 211 (275)
T ss_dssp HHHHHHHHTTEEEECSSBH
T ss_pred HHHHHHHHcCCcEEcccch
Confidence 6899999999999999985
No 6
>d1u1ia1 c.2.1.3 (A:1-227,A:333-392) Myo-inositol 1-phosphate synthase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=12.35 E-value=35 Score=26.35 Aligned_cols=21 Identities=29% Similarity=0.472 Sum_probs=18.3
Q ss_pred ccchhhHhhcCCCcccccCcc
Q 030795 132 FTGCQDLAKQKKVPFISDDLE 152 (171)
Q Consensus 132 f~GCq~lA~~k~V~FlsdDl~ 152 (171)
.-+-+++|++++||.+-||+|
T Consensus 207 ~Pal~ela~~~gvPiaGdD~K 227 (287)
T d1u1ia1 207 IPALKELAEKKGVPHAGNDGK 227 (287)
T ss_dssp SHHHHHHHHTTTCEEEESSBC
T ss_pred CHHHHHHHHHcCCCEeccchh
Confidence 345799999999999999986
No 7
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.17 E-value=38 Score=19.82 Aligned_cols=24 Identities=8% Similarity=0.281 Sum_probs=14.3
Q ss_pred cccCccceecccccccccCcceecC
Q 030795 147 ISDDLELECKGKDKYKCGSNVFWKW 171 (171)
Q Consensus 147 lsdDl~lECeGk~~~kCgSnvfwkw 171 (171)
..+++.|+|+-.....- ..++|+|
T Consensus 15 ~G~~v~l~C~~~g~p~p-~~~~~~~ 38 (96)
T d2c9aa1 15 AGQFATFQCSAIGRTVA-GDRLWLQ 38 (96)
T ss_dssp SSSCEEEEEEEESCCCS-SCEEEEE
T ss_pred CCCEEEEEEEEeecCCC-cEEEEEe
Confidence 46789999965433222 3456665
No 8
>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}
Probab=9.64 E-value=36 Score=24.28 Aligned_cols=13 Identities=15% Similarity=0.181 Sum_probs=10.5
Q ss_pred ccCccceeccccc
Q 030795 148 SDDLELECKGKDK 160 (171)
Q Consensus 148 sdDl~lECeGk~~ 160 (171)
.=|+-|||+|+-.
T Consensus 89 ~vDiViEcTG~f~ 101 (169)
T d1u8fo1 89 GAEYVVESTGVFT 101 (169)
T ss_dssp TCCEEEECSSSCC
T ss_pred CCCEEEEecceec
Confidence 4589999999854
No 9
>d1h3da1 c.94.1.1 (A:5-224) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Escherichia coli [TaxId: 562]}
Probab=9.30 E-value=27 Score=25.97 Aligned_cols=37 Identities=30% Similarity=0.377 Sum_probs=24.1
Q ss_pred hhhhcccccchhheeeeecccccC-CCccchhhHhhcCC
Q 030795 106 KRLATSGANFARAYTVQFGTCKFP-ENFTGCQDLAKQKK 143 (171)
Q Consensus 106 kRlaTS~aNfaRaytv~fG~ckfP-~Nf~GCq~lA~~k~ 143 (171)
+|.||.+-|..|.|-..-|. ++- --..|...+|-.-+
T Consensus 121 ~RIATkYp~it~~y~~~~gi-~~~ii~~~Ga~E~ap~~g 158 (220)
T d1h3da1 121 KRIATSYPHLLKRYLDQKGI-SFKSCLLNGSVEVAPRAG 158 (220)
T ss_dssp CEEEESCHHHHHHHHHHHTC-CCEEEECSSCTTHHHHTT
T ss_pred CEEhhhhhHHHHHHHHhccc-cceeeeccccccceecCC
Confidence 59999999999999766663 221 11236666665444
No 10
>d1ve4a1 c.94.1.1 (A:1-206) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Thermus thermophilus [TaxId: 274]}
Probab=9.28 E-value=20 Score=26.57 Aligned_cols=19 Identities=26% Similarity=0.350 Sum_probs=0.0
Q ss_pred hhhhhhhhhcccccchhhe
Q 030795 101 ELNDQKRLATSGANFARAY 119 (171)
Q Consensus 101 elNDKkRlaTS~aNfaRay 119 (171)
+..+-+|.||.+.|++|.|
T Consensus 104 ~~~~~~rIATkYpnit~~~ 122 (206)
T d1ve4a1 104 DTGPIRRVATKYPNFTARL 122 (206)
T ss_dssp CCSCCCEEEESCHHHHHHH
T ss_pred ccCCccEeeHHHHHHHHHH
Done!