BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030796
MTYYEDDEVVPELTLRIDIDENNNNNKGDYLKLREYEEGEPGSPRRWSCGKVWYWVKLAF
FLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLLLPSS
PSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQVCIIAKIDL

High Scoring Gene Products

Symbol, full name Information P value
AT1G12450 protein from Arabidopsis thaliana 8.5e-33
AT4G22850 protein from Arabidopsis thaliana 4.2e-31
AT4G12000 protein from Arabidopsis thaliana 3.9e-28
AT2G02370 protein from Arabidopsis thaliana 9.0e-16

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030796
        (171 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2034710 - symbol:AT1G12450 "AT1G12450" species...   358  8.5e-33   1
TAIR|locus:2132669 - symbol:AT4G22850 "AT4G22850" species...   342  4.2e-31   1
TAIR|locus:2118096 - symbol:AT4G12000 species:3702 "Arabi...   314  3.9e-28   1
TAIR|locus:2056246 - symbol:AT2G02370 "AT2G02370" species...   199  9.0e-16   1


>TAIR|locus:2034710 [details] [associations]
            symbol:AT1G12450 "AT1G12450" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR
            InterPro:IPR015414 Pfam:PF09335 eggNOG:COG0398 EMBL:BT010449
            EMBL:AK221763 IPI:IPI00546517 RefSeq:NP_172707.1 UniGene:At.15260
            EnsemblPlants:AT1G12450.1 GeneID:837802 KEGG:ath:AT1G12450
            TAIR:At1g12450 HOGENOM:HOG000070846 InParanoid:Q6NQK3 OMA:AITIYAK
            PhylomeDB:Q6NQK3 ProtClustDB:CLSN2682268 Genevestigator:Q6NQK3
            Uniprot:Q6NQK3
        Length = 303

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 77/170 (45%), Positives = 97/170 (57%)

Query:     1 MTYYED-DEVVPELTLRIDIDENNNNNKGDYLKLR----EYEEGEPGSPRRWSCGKV--- 52
             MTY    D  VPEL LR++ D +N    GDYLKLR    E +EG      R   G V   
Sbjct:     1 MTYSNGVDGTVPELKLRVEEDSDN----GDYLKLRGGSNEEDEGSSAESSRCPIGSVTSV 56

Query:    53 WYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPXXXXXXXXXXXXX 112
             W+WVKL   +  +G LA V IKWVGPF ++KE+IP INW   TFS P             
Sbjct:    57 WFWVKLISLVVCLGSLAFVIIKWVGPFLIEKELIPFINWVRNTFSIPVLGLLLFASVALF 116

Query:   113 XXXXXXXXXXMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
                       MW+AG+TFGYG GFLLI+SA ++G++LP+ IG  FLH++Q
Sbjct:   117 PSILLPSSPSMWMAGLTFGYGKGFLLILSAASIGVTLPFLIGHLFLHKMQ 166


>TAIR|locus:2132669 [details] [associations]
            symbol:AT4G22850 "AT4G22850" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR
            InterPro:IPR015414 Pfam:PF09335 HOGENOM:HOG000070846
            ProtClustDB:CLSN2682268 EMBL:BT004115 EMBL:BT004966 IPI:IPI00519677
            RefSeq:NP_194016.2 UniGene:At.32489 EnsemblPlants:AT4G22850.1
            GeneID:828384 KEGG:ath:AT4G22850 TAIR:At4g22850 InParanoid:Q84JU5
            OMA:NYCSVAT PhylomeDB:Q84JU5 Genevestigator:Q84JU5 Uniprot:Q84JU5
        Length = 296

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 71/167 (42%), Positives = 94/167 (56%)

Query:     1 MTYYEDDEVVPELTLRIDIDENNNNNKGDYLKLREY-EEGEPGSPRR----WSCGKVWYW 55
             MT  ED++ V EL +R++ D+     KG Y+KL E  E+G+     +        + W+W
Sbjct:     1 MTVTEDEKPVLELLVRVEDDDE----KGPYVKLSEVLEKGQESEQEKEEEKTDSSRFWFW 56

Query:    56 VKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPXXXXXXXXXXXXXXXX 115
             VKL+     +  LA V   W+GP  MDKE+IP+I WE  TF+ P                
Sbjct:    57 VKLSLLFAFLAALAVVGYIWIGPLIMDKELIPLIQWEIRTFTHPVCGLLVFASVAIFPTI 116

Query:   116 XXXXXXXMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
                    MW+AGMTFGYG+GFLLI+SA AVG+SLPYFIG  F H+IQ
Sbjct:   117 LLPSTPSMWIAGMTFGYGYGFLLIISAAAVGVSLPYFIGQLFCHKIQ 163


>TAIR|locus:2118096 [details] [associations]
            symbol:AT4G12000 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0006979 "response
            to oxidative stress" evidence=IMP] EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0006979 EMBL:AL049638 EMBL:AL161533
            InterPro:IPR015414 Pfam:PF09335 eggNOG:COG0398 HOGENOM:HOG000070846
            ProtClustDB:CLSN2682268 EMBL:AY072165 EMBL:AY096419 EMBL:AK226340
            IPI:IPI00531858 PIR:T06607 RefSeq:NP_192937.1 UniGene:At.33515
            UniGene:At.74289 EnsemblPlants:AT4G12000.1 GeneID:826807
            KEGG:ath:AT4G12000 TAIR:At4g12000 InParanoid:Q9SZ65 OMA:EMETFTH
            PhylomeDB:Q9SZ65 Genevestigator:Q9SZ65 Uniprot:Q9SZ65
        Length = 306

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 69/174 (39%), Positives = 95/174 (54%)

Query:     1 MTYYEDDEVVPELTLRIDIDENNNNNKGDYLKL--------REYEEGEPGSPRRWS-CGK 51
             MTY+E+D+ V E   R+ ++E+  +  G Y+KL        +E E+    SP   S CG+
Sbjct:     1 MTYHEEDDTVSEF--RVRVEEDGVDKLGHYVKLTEDFEVHRQETEQESSSSPSSSSSCGQ 58

Query:    52 ---VWYWVKLAFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPXXXXXXXXX 108
                VW+W+KL  F T +  L     KW+ P  MDKE+IP+I WE  TF+ P         
Sbjct:    59 KRSVWFWIKLGLFFTFLTALGLAGYKWLYPLIMDKELIPLIKWEMETFTHPVCGILVFAS 118

Query:   109 XXXXXXXXXXXXXXMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQ 162
                           MWVAG+TFGY +G LL + AVA+G+SLPYFI   FL++IQ
Sbjct:   119 VSLFPVILIPTTPSMWVAGITFGYFYGLLLTLPAVAIGVSLPYFISYLFLNKIQ 172


>TAIR|locus:2056246 [details] [associations]
            symbol:AT2G02370 "AT2G02370" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005312
            InterPro:IPR015414 Pfam:PF09335 eggNOG:COG0398 HOGENOM:HOG000070846
            ProtClustDB:CLSN2682268 EMBL:AF361611 EMBL:AY059151 EMBL:AY143883
            IPI:IPI00529472 PIR:H84435 RefSeq:NP_001077870.1 RefSeq:NP_565283.1
            UniGene:At.12988 EnsemblPlants:AT2G02370.1
            EnsemblPlants:AT2G02370.2 GeneID:814768 KEGG:ath:AT2G02370
            TAIR:At2g02370 InParanoid:Q9ZVQ5 OMA:MIPEAFI PhylomeDB:Q9ZVQ5
            ArrayExpress:Q9ZVQ5 Genevestigator:Q9ZVQ5 Uniprot:Q9ZVQ5
        Length = 320

 Score = 199 (75.1 bits), Expect = 9.0e-16, P = 9.0e-16
 Identities = 43/112 (38%), Positives = 55/112 (49%)

Query:    51 KVWYWVKLAFFLTSVGLLAA-VFIKWVGPFFMDKEVIPIINWETTTFSTPXXXXXXXXXX 109
             K  +W+K A  + +V LL   VF KW  PF   K +IPI+ WE T F  P          
Sbjct:    51 KFMWWLK-ALGICAVALLLTLVFGKWGVPFVFQKVLIPILQWEATAFGRPMLAIVLVVSL 109

Query:   110 XXXXXXXXXXXXXMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRI 161
                          MW+AGM FGYG GF++IM    +G+ LPY IG  F  R+
Sbjct:   110 ALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLMFRDRL 161


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.143   0.473    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      171       148   0.00068  104 3  11 22  0.42    31
                                                     30  0.39    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  171 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.36u 0.16s 15.52t   Elapsed:  00:00:01
  Total cpu time:  15.36u 0.16s 15.52t   Elapsed:  00:00:01
  Start:  Mon May 20 19:04:36 2013   End:  Mon May 20 19:04:37 2013

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