BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030798
(171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2KIP8|HACD2_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Bos taurus GN=PTPLB PE=2 SV=2
Length = 254
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%)
Query: 11 YLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGIL 70
YL YN + AGW+V L+ L+ S + S + + QT A LE++H A+GI+
Sbjct: 41 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 100
Query: 71 PSGVWLPFMQWCGRTLFFLVTACEIVQVHYVHSTISYRSTW 111
PS V L +Q R + +V S + + W
Sbjct: 101 PSSVVLTSIQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAW 141
>sp|Q7SY06|HADC_DANRE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Danio rerio GN=ptplad1 PE=2 SV=2
Length = 359
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K +LF YN +Q G WI + +L S TF + ++++ Q A +EV++ A
Sbjct: 144 KGFLFMYNLVQFLGYSWIFVNMTVRLFILGQDSFYDTFHTIADVMYFCQMLAIMEVINPA 203
Query: 67 VGILPSGVWLPFMQWCGRT--LFFLVTACEIVQ-------VHYVHSTIS 106
VG++ +GV F+Q GR LF + + E +Q V Y+ STI
Sbjct: 204 VGLVKTGVMPAFIQVMGRNFILFVIFGSLEDMQNKPVVFFVFYLWSTIE 252
>sp|Q5RBK3|HACD2_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Pongo abelii GN=PTPLB PE=2 SV=1
Length = 255
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%)
Query: 11 YLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGIL 70
YL YN + AGW+V L+ L+ S + S + + QT A LE++H A+GI+
Sbjct: 42 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 101
Query: 71 PSGVWLPFMQWCGRTLFFLVTACEIVQVHYVHSTISYRSTW 111
PS V L Q R + +V S + + W
Sbjct: 102 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAW 142
>sp|Q6Y1H2|HACD2_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Homo sapiens GN=PTPLB PE=1 SV=1
Length = 254
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%)
Query: 11 YLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGIL 70
YL YN + AGW+V L+ L+ S + S + + QT A LE++H A+GI+
Sbjct: 41 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 100
Query: 71 PSGVWLPFMQWCGRTLFFLVTACEIVQVHYVHSTISYRSTW 111
PS V L Q R + +V S + + W
Sbjct: 101 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAW 141
>sp|Q9D3B1|HACD2_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Mus musculus GN=Ptplb PE=2 SV=1
Length = 254
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%)
Query: 11 YLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGIL 70
YL YN + AGW+V L+ L+ S + S + QT A LE++H A+GI+
Sbjct: 41 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIERPLKFFQTGALLEILHCAIGIV 100
Query: 71 PSGVWLPFMQWCGRTLFFLVTACEIVQVHYVHSTISYRSTW 111
PS V L Q R + +V S + + W
Sbjct: 101 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAW 141
>sp|Q9QY80|HACD1_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Mus musculus GN=Ptpla PE=2 SV=1
Length = 281
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Query: 15 YNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGV 74
YN AGW+V ++ + + G + S + + QT A LEVVH +GI+P+ V
Sbjct: 72 YNIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLEVVHCLIGIVPTSV 131
Query: 75 WLPFMQWCGRTLFFLVTACEIVQVHYVHSTISYRSTWGNVTPKPSISIYERE--KYLCKF 132
+ +Q R + I + S + + +W VT S Y +L F
Sbjct: 132 LVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVSW-TVTEITRYSFYTFSLLDHLPHF 190
Query: 133 LCWPPFQLL 141
+ W + L
Sbjct: 191 IKWARYNLF 199
>sp|Q8K2C9|HACD3_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Mus musculus GN=ptplad1 PE=1 SV=2
Length = 362
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YLF YN +Q G WI + +L +S TF + ++++ Q A +E ++ A
Sbjct: 147 KGYLFMYNLVQLLGFSWIFVNLTVRFFILGKESFYDTFHNVADMMYFCQMLALVETLNAA 206
Query: 67 VGILPSGVWLPFMQWCGRT--LFFLVTACEIVQ 97
+G+ + V +Q+ GR LF + E +Q
Sbjct: 207 IGVTSTPVLPALIQFLGRNFILFLVFGTMEEMQ 239
>sp|Q9N1R5|HACD1_SHEEP Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Ovis aries GN=PTPLA PE=2 SV=1
Length = 288
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 3/129 (2%)
Query: 15 YNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGV 74
YN AGW+V ++ + + G + S + + QT A LE+VH +GI+P+ V
Sbjct: 79 YNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSV 138
Query: 75 WLPFMQWCGRTLFFLVTACEIVQVHYVHSTISYRSTWGNVTPKPSISIYERE--KYLCKF 132
+ +Q R + I + S + + W VT S Y +L F
Sbjct: 139 LVAGVQVSSRIFMVWLVTHSIKPIQNEESVVLFLVAW-TVTEITRYSFYTFSLLDHLPYF 197
Query: 133 LCWPPFQLL 141
+ W +
Sbjct: 198 IKWARYNFF 206
>sp|Q9P035|HACD3_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Homo sapiens GN=PTPLAD1 PE=1 SV=2
Length = 362
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YLF YN +Q G WI + +L +S TF + ++++ Q A +E ++ A
Sbjct: 147 KGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAA 206
Query: 67 VGILPSGVWLPFMQWCGRT--LFFLVTACEIVQ 97
+G+ S V +Q GR LF + E +Q
Sbjct: 207 IGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQ 239
>sp|Q5NVQ2|PTAD1_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Pongo abelii GN=PTPLAD1 PE=2 SV=1
Length = 364
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YLF YN +Q G WI + +L +S TF + ++++ Q A +E ++ A
Sbjct: 149 KGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAA 208
Query: 67 VGILPSGVWLPFMQWCGRT--LFFLVTACEIVQ 97
+G+ S V +Q GR LF + E +Q
Sbjct: 209 IGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQ 241
>sp|A2AKM2|HACD4_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Mus musculus GN=Ptplad2 PE=2 SV=2
Length = 232
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 5 RQPIKLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEV 62
R +YLF Y +Q G WI+A + S+A TF + G ++ + Q+ + LE+
Sbjct: 13 RYRKNVYLFIYYLIQFCGHSWILANMTVRFFSFGKDSMADTFYAIGLVMRVCQSISLLEL 72
Query: 63 VHGAVGILPSGVWLPFMQWCGRT--LFFLVTACEIVQ 97
+H +GI + ++ F+Q R LF ++T+ E VQ
Sbjct: 73 LHIYIGIESNQLFPRFLQLTERVIILFGVITSQEEVQ 109
>sp|Q4W1W1|HACD1_CANFA Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Canis familiaris GN=PTPLA PE=2 SV=1
Length = 249
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 3/129 (2%)
Query: 15 YNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGV 74
YN AGW+V ++ + + G + S + + QT A LE+VH +GI+P+ V
Sbjct: 40 YNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSV 99
Query: 75 WLPFMQWCGRTLFFLVTACEIVQVHYVHSTISYRSTWGNVTPKPSISIYERE--KYLCKF 132
+ +Q R + I + S + + W VT S Y +L F
Sbjct: 100 IVAGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAW-TVTEITRYSFYTFSLLDHLPYF 158
Query: 133 LCWPPFQLL 141
+ W +
Sbjct: 159 IKWARYNFF 167
>sp|A7YY55|HACD3_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Bos taurus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YLF YN +Q G WI + +L +S TF + ++++ Q A +E ++ A
Sbjct: 147 KGYLFMYNLVQFLGFSWIFVNMTVRFFILGKESFYDTFHTVADMMYFCQMLAAVESINAA 206
Query: 67 VGILPSGVWLPFMQWCGRT--LFFLVTACEIVQ-------VHYVHSTIS 106
+G+ S V Q GR LF + E +Q V Y+ ST+
Sbjct: 207 IGVTKSPVVPSLFQLLGRNFILFIIFGTMEEMQNKAVVFFVFYIWSTVE 255
>sp|O17040|HACD_CAEEL Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase hpo-8 OS=Caenorhabditis elegans GN=hpo-8
PE=3 SV=2
Length = 218
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 8 IKLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAV 67
++ YL YN LQ GW + + L + + + S + I QTAA LEV+H V
Sbjct: 3 VQTYLVAYNVLQILGWSAILVKTVLGLANGLTWPQLYESVEFELKIFQTAAILEVIHAIV 62
Query: 68 GILPSGVWLPFMQWCGRTLF 87
G++ S V MQ R +
Sbjct: 63 GLVRSPVGTTAMQVTSRVVL 82
>sp|B0YJ81|HACD1_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Homo sapiens GN=PTPLA PE=1 SV=1
Length = 288
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%)
Query: 15 YNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGV 74
Y+ AGW+V ++ + + G + S + + QT A LE+VH +GI+P+ V
Sbjct: 79 YDIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSV 138
Query: 75 WLPFMQWCGRTLFFLVTACEIVQVHYVHSTISYRSTW 111
+ +Q R + I + S + + W
Sbjct: 139 IVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAW 175
>sp|Q5VWC8|HACD4_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Homo sapiens GN=PTPLAD2 PE=1 SV=1
Length = 232
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 11 YLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVG 68
YLF Y +Q G WI + S+ TF + G ++ + Q+ + LE++H VG
Sbjct: 19 YLFIYYLIQFCGHSWIFTNMTVRFFSFGKDSMVDTFYAIGLVMRLCQSVSLLELLHIYVG 78
Query: 69 ILPSGVWLPFMQWCGR--TLFFLVTACEIVQVHYV 101
I + + F+Q R LF ++T+ E VQ YV
Sbjct: 79 IESNHLLPRFLQLTERIIILFVVITSQEEVQEKYV 113
>sp|Q5ZEJ0|PAS2B_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2B OS=Oryza sativa subsp.
japonica GN=PAS2B PE=2 SV=1
Length = 221
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 9 KLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVG 68
+LYL YN GW ++ ++ LL + A +A+ + QTAAFLE++HG VG
Sbjct: 10 RLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEA-VYAAVERPLQFAQTAAFLEILHGLVG 68
Query: 69 ILPSGV 74
++ S V
Sbjct: 69 LVRSPV 74
>sp|Q7XSZ4|PAS2A_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2A OS=Oryza sativa subsp.
japonica GN=PAS2A PE=2 SV=2
Length = 221
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 9 KLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVG 68
+LYL YN GW ++ ++ LL + A +A+ + QTAAFLE++HG VG
Sbjct: 10 RLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEA-VYAAVERPLQFAQTAAFLEILHGLVG 68
Query: 69 ILPSGV 74
++ S V
Sbjct: 69 LVRSPV 74
>sp|Q5ZM57|HACD_CHICK Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Gallus gallus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 36.2 bits (82), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YL YN +Q G WI + +L S TF + ++++ QT A +E+++
Sbjct: 147 KGYLIMYNLVQFLGFSWIFVNMTVRLFILGKDSFYDTFHTIADMMYFCQTLALMEILNSL 206
Query: 67 VGILPSGVWLPFMQWCGRT--LFFLVTACEIVQ 97
+G++ S + +Q GR LF ++ + E +Q
Sbjct: 207 IGLVRSPLIPAVIQVFGRNFILFVVLGSLEEMQ 239
>sp|Q8VZB2|PAS2_ARATH Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2 OS=Arabidopsis thaliana
GN=PAS2 PE=1 SV=1
Length = 221
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 9 KLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVG 68
++YL YN + AGW +++ ++ L T + + + + + QTAA LE++HG VG
Sbjct: 10 RVYLTLYNWIVFAGWAQVLYLAITTLKET-GYENVYDAIEKPLQLAQTAAVLEILHGLVG 68
Query: 69 ILPSGV 74
++ S V
Sbjct: 69 LVRSPV 74
>sp|Q8NP09|Y2017_CORGL Uncharacterized membrane protein Cgl2017/cg2211 OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=Cgl2017 PE=4 SV=1
Length = 147
Score = 30.0 bits (66), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 16 NSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVW 75
N++Q AGWI +FML N G E IW+L A L +G+L ++
Sbjct: 34 NTIQLAGWISVLFMLGYNF-------GNHKGHVETIWLLVITALL-----VIGLLIH-LF 80
Query: 76 LPFMQWCGRTLFFLVTACEIVQVHYVHSTISYRSTWGNVT 115
P + RT+ V+ + + + TWGN+T
Sbjct: 81 EPKLSQV-RTITSRNKPVGHVEPDWTYDQATLTGTWGNLT 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.140 0.474
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,056,076
Number of Sequences: 539616
Number of extensions: 2242772
Number of successful extensions: 5864
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 5842
Number of HSP's gapped (non-prelim): 29
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 57 (26.6 bits)