BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030801
(171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZVC7|XYP11_ARATH Xylogen-like protein 11 OS=Arabidopsis thaliana GN=XYP11 PE=1 SV=2
Length = 176
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 75/114 (65%), Gaps = 5/114 (4%)
Query: 30 SGQAL-APGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVE 88
SGQ+ AP P A GPS SP + CL +LN+SDC SYV GSN P+ CCPELAG+V+
Sbjct: 19 SGQSPPAPEPIAADGPS-SPVN-CLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQ 76
Query: 89 SNPICLCQLLGKNNT--YGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAP 140
S+P C+C L G + +G+K+D RA +L ++CGV P +LCS+ G P +P
Sbjct: 77 SSPECVCNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFPTISP 130
>sp|Q8VYI9|NLTL5_ARATH Non-specific lipid-transfer protein-like protein At5g64080
OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1
Length = 182
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%)
Query: 37 GPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQ 96
G S +P+P DC T +LNM+DCLS+V+ G V P+ CC L +++++ CLC+
Sbjct: 28 GASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCE 87
Query: 97 LLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPGPASPG 150
+ + G+ ++IT+A LP+ C + P + C L+ P AP +PG A+ G
Sbjct: 88 AFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAPGLAPGVAAAG 141
>sp|Q9ZQI8|NLTL2_ARATH Non-specific lipid-transfer protein-like protein At2g13820
OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1
Length = 169
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 51 DCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDI 110
DC + +LNM+DCLS+VT GS V P+ CC L +V + P CLC+ + + G+ +D+
Sbjct: 26 DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTLDL 85
Query: 111 TRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPG 145
++A LPSVC V PP C L+ V + P +PG
Sbjct: 86 SKAASLPSVCKVAAPPSARCGLS-VSGDPPATAPG 119
>sp|Q6ASY2|NLTL1_ORYSJ Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp.
japonica GN=LTPL1 PE=1 SV=1
Length = 178
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 39 SMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNV-TVPDKPCCPELAGLVESNPI--CLC 95
+ A P+P+P DC + L ++DCL YVT G + P K CC E+ G ++ + CLC
Sbjct: 27 ATASSPAPAPAVDCTAEALKLADCLDYVTPGKTAPSRPSKLCCGEVKGALKDSAAVGCLC 86
Query: 96 QLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLC 130
+ T + I+ITRAL LP+ CG + C
Sbjct: 87 AAF-TSKTLPLPINITRALHLPAACGADASAFSKC 120
>sp|Q9C7F7|UGPI5_ARATH Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis
thaliana GN=At1g27950 PE=1 SV=1
Length = 193
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYG---- 105
D+C ++ CL + T T+P K CC + + E +P CLC ++ + T G
Sbjct: 33 DECNQDFQKVTLCLDFAT--GKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALK 90
Query: 106 -IKIDITRALKLPSVCGVTTPPVNLC-SLAGVPIEAP 140
+ + + ++LP+ C + + C L G+ +P
Sbjct: 91 DLGVQEDKLIQLPTSCQLHNASITNCPKLLGISPSSP 127
>sp|Q9FFY3|VAS_ARATH Lipid transfer-like protein VAS OS=Arabidopsis thaliana GN=VAS PE=2
SV=1
Length = 151
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 62 CLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIK---IDITRALKLPS 118
CL+Y+ V + CC L ++ +NP CLC+++ + + ID+ A LP+
Sbjct: 39 CLNYLNGTKEV---PQVCCNPLKSVIRNNPECLCRMISNRWSSQAERAGIDVNDAQMLPA 95
Query: 119 VCGVTTPPV 127
CG P+
Sbjct: 96 RCGEHVNPI 104
>sp|Q28UI7|AROA_JANSC 3-phosphoshikimate 1-carboxyvinyltransferase OS=Jannaschia sp.
(strain CCS1) GN=aroA PE=3 SV=1
Length = 450
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 62 CLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTY-------GIKIDITRAL 114
C + +TEGS+V VP+ P AGL E+ + +G + TY G + RA
Sbjct: 253 CAAIITEGSDVLVPNIGLNPTRAGLFET-----LRDMGADLTYENPREEGGEPVADLRAK 307
Query: 115 KLPSVCGVTTPPVNLCSL 132
P + G+ PP S+
Sbjct: 308 FSPDMKGIEVPPERAASM 325
>sp|B3PVT4|AROE_RHIE6 Shikimate dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=aroE
PE=3 SV=1
Length = 285
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 69 GSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRA 113
G NVT+P K ELA + P L Q LG +NT ++ D+ A
Sbjct: 67 GGNVTIPHK----ELAFRLADRPDALSQELGASNTLWLEDDLLHA 107
>sp|A1TJ24|ATKA_ACIAC Potassium-transporting ATPase A chain OS=Acidovorax citrulli
(strain AAC00-1) GN=kdpA PE=3 SV=1
Length = 601
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 97 LLGKNNTY-GIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPGPASPGIY 152
++G+ Y G KI++ R +KL SV + TP + L A V + AP G G A+PG +
Sbjct: 437 MIGRTPEYLGKKIEV-REMKLTSVAILVTPLLVLVGTA-VAVLAPAGQAGIANPGAH 491
>sp|Q5GRW9|LEPA_WOLTR Elongation factor 4 OS=Wolbachia sp. subsp. Brugia malayi (strain
TRS) GN=lepA PE=3 SV=1
Length = 598
Score = 30.8 bits (68), Expect = 3.9, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 59 MSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIK 107
M+DC G +T KPC L G E +P+ C + N T G K
Sbjct: 265 MADC----KVGDTITEEKKPCGEALPGFKEIHPVVFCSIF-PNKTDGFK 308
>sp|Q9Y4I5|MTL5_HUMAN Tesmin OS=Homo sapiens GN=MTL5 PE=1 SV=2
Length = 508
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 45 SPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTY 104
S +PE+ L +L C + S+ + D CC + +SNP+ +CQL G
Sbjct: 169 SNNPEEATLQNLLAQESCCKFP---SSQELEDASCC---SLKKDSNPMVICQLKGGTQML 222
Query: 105 GIKIDITRALK 115
I TR LK
Sbjct: 223 CIDNSRTRELK 233
>sp|Q50393|EMBC_MYCSM Probable arabinosyltransferase C OS=Mycobacterium smegmatis GN=embC
PE=3 SV=2
Length = 1074
Score = 30.8 bits (68), Expect = 4.8, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 22 MVSCIGSSSGQALAPGPSMAFGPSPSPEDDCLTKVL------NMSDCLSYVTEGSNV 72
M++ IG +GQAL S+ FGP+ P D V+ N +D S V G+ V
Sbjct: 746 MLTPIGEPAGQALGAVTSLGFGPNGIPSDVSADPVMEQPGTDNFADSDSGVVTGTEV 802
>sp|Q9LDB4|NLTP6_ARATH Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana
GN=LTP6 PE=1 SV=1
Length = 113
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 16/84 (19%)
Query: 52 CLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGL-------VESNPICLCQLLGKNNTY 104
C T + ++ CLSYVT+G V CC L L V+ +C C K+
Sbjct: 23 CNTVIADLYPCLSYVTQGGPVPT---LCCNGLTTLKSQAQTSVDRQGVCRCI---KSAIG 76
Query: 105 GIKID---ITRALKLPSVCGVTTP 125
G+ + I AL+LPS CGV P
Sbjct: 77 GLTLSPRTIQNALELPSKCGVDLP 100
>sp|B0G138|PKS21_DICDI Probable polyketide synthase 21 OS=Dictyostelium discoideum GN=pks21
PE=3 SV=1
Length = 2779
Score = 29.6 bits (65), Expect = 9.2, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 49 EDDCLTKVLNMSDCLSY---VTEGSNVTVPDKPCCPELAGLVE--SNPICLCQLLGKNNT 103
E L +N D L Y V NV++ P E +G++ SN C+ +N
Sbjct: 1654 EVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISNENQNCEFKVGDNV 1713
Query: 104 YGIKIDITRALKLPSVCGVTTPPVNLCSL--AGVPI 137
+GI D T + + V V+ P N+ + A +P+
Sbjct: 1714 FGIACDTTASHVIADVLYVSHKPENISHVEAASLPV 1749
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,941,350
Number of Sequences: 539616
Number of extensions: 3219177
Number of successful extensions: 9003
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 8949
Number of HSP's gapped (non-prelim): 83
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)