Query 030801
Match_columns 171
No_of_seqs 154 out of 1054
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 07:09:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030801.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030801hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1afh_A Maize nonspecific lipid 99.6 5.5E-17 1.9E-21 117.0 0.3 80 50-133 2-92 (93)
2 2ljo_A Non-specific lipid-tran 99.6 3.6E-17 1.2E-21 118.3 -1.1 81 50-133 2-91 (93)
3 2alg_A Non-specific lipid tran 99.6 3.4E-17 1.2E-21 117.9 -1.2 79 50-133 2-91 (92)
4 1t12_A LTP 1, nonspecific lipi 99.6 2.1E-16 7.1E-21 113.7 0.3 78 50-133 2-90 (91)
5 1bwo_A NS-LTP1, nonspecific li 99.6 1.7E-16 5.7E-21 113.9 -0.5 79 50-133 1-90 (90)
6 1siy_A LTP 1, NS-LTP1, nonspec 99.6 2.6E-16 8.8E-21 113.1 0.0 79 50-133 1-90 (91)
7 2rkn_A DIR1 protein, AT5G48485 99.4 8.8E-15 3E-19 101.8 -0.9 72 49-126 2-75 (77)
8 1n89_A Lipid transfer protein; 99.4 6.4E-14 2.2E-18 95.3 0.2 61 57-125 5-65 (67)
9 1l6h_A LTP2, non-specific lipi 99.3 7E-14 2.4E-18 95.7 -0.2 61 57-125 6-66 (69)
10 1hyp_A Hydrophobic protein fro 97.9 1.9E-06 6.5E-11 60.3 0.4 68 58-132 10-79 (80)
11 3ob4_A Conglutin, maltose ABC 85.9 0.041 1.4E-06 48.3 -3.6 52 77-132 429-490 (500)
12 1s6d_A Albumin 8; all helix, f 78.8 0.93 3.2E-05 32.5 1.9 72 49-123 8-97 (103)
13 1sm7_A Recombinant IB pronapin 75.2 0.33 1.1E-05 35.0 -1.4 75 52-131 5-105 (109)
14 1pnb_B Napin BNIB; napin IA an 62.1 1 3.5E-05 30.4 -1.0 52 75-131 10-71 (75)
15 2lvf_A 2S albumin; allergen, c 56.4 0.63 2.1E-05 34.0 -3.1 77 50-132 6-107 (114)
16 2ds2_B Sweet protein mabinlin- 51.0 1.2 4.2E-05 29.9 -2.1 50 77-131 8-68 (72)
17 1b1u_A Protein (alpha-amylase/ 46.4 2.9 0.0001 30.9 -0.9 72 57-131 15-115 (122)
18 1bea_A Bifunctional amylase/se 44.5 7.7 0.00026 28.8 1.2 72 58-133 16-118 (127)
19 1w2q_A Conglutin, ARA H 6; all 42.1 4.5 0.00015 30.0 -0.4 84 45-131 9-118 (127)
20 1psy_A 2S albumin, RICC3; albu 22.6 42 0.0014 24.5 2.0 71 49-122 15-116 (125)
No 1
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.61 E-value=5.5e-17 Score=117.01 Aligned_cols=80 Identities=24% Similarity=0.498 Sum_probs=66.2
Q ss_pred CCchhhhcccccCHHHhhCCCCCCCCCcchHHHHHhccc-------CCCceeceeccCCCccccccCHHHHhhhhcccCC
Q 030801 50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVE-------SNPICLCQLLGKNNTYGIKIDITRALKLPSVCGV 122 (171)
Q Consensus 50 ~~C~~~l~~L~pCl~yl~g~~~~~~Ps~~CC~alk~l~~-------~~~~CLC~~~~~~~~~gi~in~trA~~LP~~Cgv 122 (171)
.+|.+++..|.||++|+++++ ..|++.||++|+++++ .+..|+|.+... ..++ .||.++|+.||++||+
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~--~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~-~~~~-~in~~~A~~LP~~C~v 77 (93)
T 1afh_A 2 ISCGQVASAIAPCISYARGQG--SGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAA-AGVS-GLNAGNAASIPSKCGV 77 (93)
T ss_dssp CSSHHHHHHHGGGHHHHTTSC--CSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHH-TTST-TCCHHHHHHHHHHHHC
T ss_pred CChHHHHHhccCcHHHHcCCC--CCChHHHHHHHHHHHHhhcCCCCCcccCEeecccc-cccc-CcCHHHHHHHHHHcCC
Confidence 579999999999999999864 5688899999999973 236899997643 3344 6899999999999999
Q ss_pred CCC----CCCCCCCC
Q 030801 123 TTP----PVNLCSLA 133 (171)
Q Consensus 123 ~~P----p~s~C~~~ 133 (171)
++| +.+||+++
T Consensus 78 ~~p~~is~~~dC~~v 92 (93)
T 1afh_A 78 SIPYTISTSTDCSRV 92 (93)
T ss_dssp CCSSCCSTTCCSSSC
T ss_pred CCCCCCCCCCCCccC
Confidence 887 45799875
No 2
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.60 E-value=3.6e-17 Score=118.31 Aligned_cols=81 Identities=27% Similarity=0.556 Sum_probs=65.8
Q ss_pred CCchhhhcccccCHHHhhCCCCCCCCCcchHHHHHhcccC-----CCceeceeccCCCccccccCHHHHhhhhcccCCCC
Q 030801 50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVES-----NPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTT 124 (171)
Q Consensus 50 ~~C~~~l~~L~pCl~yl~g~~~~~~Ps~~CC~alk~l~~~-----~~~CLC~~~~~~~~~gi~in~trA~~LP~~Cgv~~ 124 (171)
.+|.+++..|.||++|++++ ..|+..||+++++|++. ++.|+|.-+++....+..||.++|.+||++|||++
T Consensus 2 isC~~v~~~L~pCl~Yv~g~---~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~ 78 (93)
T 2ljo_A 2 ISCGAVTSDLSPCLTYLTGG---PGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNI 78 (93)
T ss_dssp CSSHHHHHHHHHHHHHHTTS---SCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCC
T ss_pred CCHHHHHHHHHhHHHHHcCC---CCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCC
Confidence 68999999999999999986 35889999999999764 34677776654322334689999999999999999
Q ss_pred C----CCCCCCCC
Q 030801 125 P----PVNLCSLA 133 (171)
Q Consensus 125 P----p~s~C~~~ 133 (171)
| +.+||+++
T Consensus 79 p~~Is~~~dC~~v 91 (93)
T 2ljo_A 79 PYKISTTTNCNTV 91 (93)
T ss_dssp SSCCSTTCCGGGC
T ss_pred CCCCCCCCCCCCC
Confidence 8 55799875
No 3
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.60 E-value=3.4e-17 Score=117.89 Aligned_cols=79 Identities=22% Similarity=0.501 Sum_probs=65.8
Q ss_pred CCchhhhcccccCHHHhhCCCCCCCCCcchHHHHHhcc-------cCCCceeceeccCCCccccccCHHHHhhhhcccCC
Q 030801 50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLV-------ESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGV 122 (171)
Q Consensus 50 ~~C~~~l~~L~pCl~yl~g~~~~~~Ps~~CC~alk~l~-------~~~~~CLC~~~~~~~~~gi~in~trA~~LP~~Cgv 122 (171)
.+|.+++..|.||++|+++++ .|+..||++|++|+ +.+..|+|.+... +.++ .||.++|+.||++||+
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~---~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~-~~~~-~in~~~A~~LP~~Cgv 76 (92)
T 2alg_A 2 ITCGQVSSSLAPCIPYVRGGG---AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLS-ASVP-GVNPNNAAALPGKCGV 76 (92)
T ss_dssp CCHHHHHHHHGGGHHHHHHCS---CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHH-HHST-TCCHHHHHHHHHHTTC
T ss_pred CChHHHHHhccCcHHHHcCCC---CCCHHHHHHHHHHHhhhcccCCCCcCCccccCcc-cccC-ccChHHHHHHHHHcCC
Confidence 579999999999999999863 48889999999987 3457899997543 4454 6899999999999999
Q ss_pred CCC----CCCCCCCC
Q 030801 123 TTP----PVNLCSLA 133 (171)
Q Consensus 123 ~~P----p~s~C~~~ 133 (171)
++| +.+||+++
T Consensus 77 ~~p~~is~~~dC~~v 91 (92)
T 2alg_A 77 SIPYKISASTNCATV 91 (92)
T ss_dssp CCSSCSSTTSCGGGC
T ss_pred CCCCCCCCCCCCccC
Confidence 987 45799875
No 4
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.57 E-value=2.1e-16 Score=113.67 Aligned_cols=78 Identities=31% Similarity=0.616 Sum_probs=64.4
Q ss_pred CCchhhhcccccCHHHhhCCCCCCCCCcchHHHHHhcccC-------CCceeceeccCCCccccccCHHHHhhhhcccCC
Q 030801 50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVES-------NPICLCQLLGKNNTYGIKIDITRALKLPSVCGV 122 (171)
Q Consensus 50 ~~C~~~l~~L~pCl~yl~g~~~~~~Ps~~CC~alk~l~~~-------~~~CLC~~~~~~~~~gi~in~trA~~LP~~Cgv 122 (171)
.+|.+++..|.||++|+++++ . |+ .||++|+++++. +..|+|.+.. ...++ .||.++|+.||++||+
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~--~-P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~-~~~~~-~in~~~A~~LP~~C~v 75 (91)
T 1t12_A 2 ITCGQVTSNLAPCLAYLRNTG--P-LG-RCCGGVKALVNSARTTEDRQIACTCLKSA-AGAIS-GINLGKAAGLPSTCGV 75 (91)
T ss_dssp CCHHHHHHHTHHHHHHHTTSS--C-CT-THHHHHHHHHHTTCSTHHHHHHHHHHHHH-HHHCT-TCCHHHHHHHHHHTTC
T ss_pred CChHHHHHhccCcHHHHcCCC--C-hH-HHHHHHHHHHhhccCCCCCCccCCCcccc-ccccC-CcChhHHHHHHHHcCC
Confidence 579999999999999999864 4 88 999999999764 5799998532 23444 6899999999999999
Q ss_pred CCC----CCCCCCCC
Q 030801 123 TTP----PVNLCSLA 133 (171)
Q Consensus 123 ~~P----p~s~C~~~ 133 (171)
++| +.+||+++
T Consensus 76 ~~p~~is~~~dC~~v 90 (91)
T 1t12_A 76 NIPYKISPSTDCSKV 90 (91)
T ss_dssp CCSSCSSSSSCCTTC
T ss_pred CCCCCCCCCCCCccC
Confidence 887 45799875
No 5
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.57 E-value=1.7e-16 Score=113.92 Aligned_cols=79 Identities=28% Similarity=0.472 Sum_probs=63.8
Q ss_pred CCchhhhcccccCHHHhhCCCCCCCCCcchHHHHHhcccC-------CCceeceeccCCCccccccCHHHHhhhhcccCC
Q 030801 50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVES-------NPICLCQLLGKNNTYGIKIDITRALKLPSVCGV 122 (171)
Q Consensus 50 ~~C~~~l~~L~pCl~yl~g~~~~~~Ps~~CC~alk~l~~~-------~~~CLC~~~~~~~~~gi~in~trA~~LP~~Cgv 122 (171)
.+|.+++..|.||++|+++++ . |+.+||++|+++++. +..|+|.+... ..++ .||.++|+.||++||+
T Consensus 1 i~C~~v~~~L~pCl~y~~~~~--~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~-~~~~-~in~~~A~~LP~~C~v 75 (90)
T 1bwo_A 1 IDCGHVDSLVRPCLSYVQGGP--G-PSGQCCDGVKNLHNQARSQSDRQSACNCLKGIA-RGIH-NLNEDNARSIPPKCGV 75 (90)
T ss_dssp CCHHHHHHHHGGGHHHHTTCS--C-CCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHH-TTCT-TCCHHHHHTHHHHHTC
T ss_pred CCHHHHHHhhcccHHHHcCCC--C-CCHHHhHHHHHHHhhccCCCCCCccCcCccCch-hccC-CcCHHHHHHHHHHcCC
Confidence 369999999999999999863 3 999999999998742 46899975432 3343 6899999999999999
Q ss_pred CCC----CCCCCCCC
Q 030801 123 TTP----PVNLCSLA 133 (171)
Q Consensus 123 ~~P----p~s~C~~~ 133 (171)
++| +.+||+++
T Consensus 76 ~~p~~is~~~dC~~v 90 (90)
T 1bwo_A 76 NLPYTISLNIDCSRV 90 (90)
T ss_dssp CCSSCCCTTCCGGGC
T ss_pred CCCCCCCCCCCCCCC
Confidence 987 44688763
No 6
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.56 E-value=2.6e-16 Score=113.06 Aligned_cols=79 Identities=23% Similarity=0.552 Sum_probs=64.4
Q ss_pred CCchhhhcccccCHHHhhCCCCCCCCCcchHHHHHhcccC-------CCceeceeccCCCccccccCHHHHhhhhcccCC
Q 030801 50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVES-------NPICLCQLLGKNNTYGIKIDITRALKLPSVCGV 122 (171)
Q Consensus 50 ~~C~~~l~~L~pCl~yl~g~~~~~~Ps~~CC~alk~l~~~-------~~~CLC~~~~~~~~~gi~in~trA~~LP~~Cgv 122 (171)
.+|.+++..|.||++|+++++ . |+..||++|+++++. +..|+|.+.. ...++ .||.++|+.||++||+
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~--~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k~~-~~~~~-~in~~~A~~LP~~Cgv 75 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGG--V-VPPSCCTGVKNILNSSRTTADRRAVCSCLKAA-AGAVR-GINPNNAEALPGKCGV 75 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCS--C-CCHHHHHHHHHHHTTTCSSHHHHHHHHHHHHH-TTCCS-SCCHHHHHHHHHHHTC
T ss_pred CCHHHHHHhccCcHHHHhCCC--C-CcHHHHHHHHHHHhhhccCCCCCcCCcccCCc-ccccC-CcCHHHHHHHHHHcCC
Confidence 369999999999999999863 3 999999999998643 4589998532 23443 5899999999999999
Q ss_pred CCC----CCCCCCCC
Q 030801 123 TTP----PVNLCSLA 133 (171)
Q Consensus 123 ~~P----p~s~C~~~ 133 (171)
++| +.+||+++
T Consensus 76 ~~p~~is~~~dC~~v 90 (91)
T 1siy_A 76 NIPYKISTSTNCNSI 90 (91)
T ss_dssp CCSSCSCTTSCSSTT
T ss_pred CCCCCCCCCCCCccC
Confidence 887 45799875
No 7
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.42 E-value=8.8e-15 Score=101.80 Aligned_cols=72 Identities=28% Similarity=0.614 Sum_probs=59.8
Q ss_pred CCCchhhhcccccCHHHhhCCCCCCCCCcchHHHHHhcccCCCceeceeccCC--CccccccCHHHHhhhhcccCCCCCC
Q 030801 49 EDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKN--NTYGIKIDITRALKLPSVCGVTTPP 126 (171)
Q Consensus 49 ~~~C~~~l~~L~pCl~yl~g~~~~~~Ps~~CC~alk~l~~~~~~CLC~~~~~~--~~~gi~in~trA~~LP~~Cgv~~Pp 126 (171)
..+|.+++.+|.+|++|+++++ ...|+..||++|++ .+..|||.++++. ..+ .||.++|+.||++||+++|+
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~~-~~~Ps~~CC~~lk~---~~~~ClC~~~~~~~~~~~--gin~~~A~~LP~~Cgv~~p~ 75 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKEN-PTSPSQPCCTALQH---ADFACLCGYKNSPWLGSF--GVDPELASALPKQCGLANAP 75 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSSS-CCCCCHHHHHHHTT---CCHHHHHTTTTCHHHHHH--TBCHHHHHHHHHHTTCSCCC
T ss_pred cchHHhHHHhHhhCHHHHcCCC-CCCCCHHHHHHHHh---cCcCCcCcccCCcchhhc--CcCHHHHHHHHHHcCCCCCC
Confidence 3679999999999999999742 35799999999998 3679999998742 233 47999999999999999863
No 8
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.36 E-value=6.4e-14 Score=95.34 Aligned_cols=61 Identities=30% Similarity=0.614 Sum_probs=52.4
Q ss_pred cccccCHHHhhCCCCCCCCCcchHHHHHhcccCCCceeceeccCCCccccccCHHHHhhhhcccCCCCC
Q 030801 57 LNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTP 125 (171)
Q Consensus 57 ~~L~pCl~yl~g~~~~~~Ps~~CC~alk~l~~~~~~CLC~~~~~~~~~gi~in~trA~~LP~~Cgv~~P 125 (171)
..|.||++|++++ ..|+.+||++|++ +..|+|.++++ ..++..||.++|+.||++||+++|
T Consensus 5 ~~L~pC~~~v~~~---~~Ps~~CC~~lk~----~~~ClC~~~k~-~~~~~~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 5 SQLAVCASAILSG---AKPSGECCGNLRA----QQGCFCQYAKD-PTYGQYIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp STTHHHHHHHTTC---CCCCHHHHHHHHH----HSSHHHHGGGC-STTHHHHTCHHHHHHHHHHTSCCS
T ss_pred hhcccCHHHHcCC---CCCCHHHHHhhCC----CCCCCCccccC-cccccccCHHHHHHHHHHcCCCCC
Confidence 5789999999975 3699999999998 47999998876 444556899999999999999986
No 9
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.35 E-value=7e-14 Score=95.66 Aligned_cols=61 Identities=28% Similarity=0.631 Sum_probs=52.4
Q ss_pred cccccCHHHhhCCCCCCCCCcchHHHHHhcccCCCceeceeccCCCccccccCHHHHhhhhcccCCCCC
Q 030801 57 LNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTP 125 (171)
Q Consensus 57 ~~L~pCl~yl~g~~~~~~Ps~~CC~alk~l~~~~~~CLC~~~~~~~~~gi~in~trA~~LP~~Cgv~~P 125 (171)
++|.||++|++++ ..|+.+||++|++ +..|+|.++++ ..++..||.++|+.||++||+++|
T Consensus 6 ~~L~pC~~~v~~~---~~Ps~~CC~~lk~----~~~ClC~~~k~-~~~~~~in~~~A~~Lp~~Cgv~~P 66 (69)
T 1l6h_A 6 GQLTVCTGAIAGG---ARPTAACCSSLRA----QQGCFCQFAKD-PRYGRYVNSPNARKAVSSCGIALP 66 (69)
T ss_dssp TTHHHHHHHHTTC---CSTTHHHHHHHHH----HHHHHHHHTTC-SSHHHHTTTTTGGGCCCCCSSCSC
T ss_pred hhcccCHHHHcCC---CCCCHHHHHhhCC----CCCCCCccccC-cccccccCHHHHHHHHHHcCCCCC
Confidence 5789999999975 3699999999998 47999998876 444556899999999999999985
No 10
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=97.89 E-value=1.9e-06 Score=60.32 Aligned_cols=68 Identities=28% Similarity=0.637 Sum_probs=55.4
Q ss_pred ccccCHHHhhCCCCCCCCCcchHHHHHhcccC-CCceeceeccCCCccccccCHHHHhh-hhcccCCCCCCCCCCCC
Q 030801 58 NMSDCLSYVTEGSNVTVPDKPCCPELAGLVES-NPICLCQLLGKNNTYGIKIDITRALK-LPSVCGVTTPPVNLCSL 132 (171)
Q Consensus 58 ~L~pCl~yl~g~~~~~~Ps~~CC~alk~l~~~-~~~CLC~~~~~~~~~gi~in~trA~~-LP~~Cgv~~Pp~s~C~~ 132 (171)
+|..|.+.+.+. ..+...||+-++++.+. ...|||..++ .+|+ +|.+.+++ |.+.||...|++++|..
T Consensus 10 kLgvCanvL~g~---~~~~~~CC~Ll~GL~dleAAvCLCtaik---~Lgi-lnlpv~L~llln~Cgk~~P~gF~C~~ 79 (80)
T 1hyp_A 10 DLSICLNILGGS---LGTVDDCCALIGGLGDIEAIVCLCIQLR---ALGI-LNLNRNLQLILNSCGRSYPSNATCPR 79 (80)
T ss_dssp CCGGGGGGGGTC---CTTHHHHHHHHHTSCHHHHHHHHHHHHH---HHTC-SCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred chhHHHHHhCcC---CCCCCccchhhhCcchhhhhhhhhhhcc---ccce-eecChhHHHHHHHhCCcCcCCCCCCC
Confidence 588999988542 23667899999999877 4689999886 3677 78888888 67799999999999963
No 11
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=85.87 E-value=0.041 Score=48.34 Aligned_cols=52 Identities=31% Similarity=0.700 Sum_probs=34.8
Q ss_pred cchHHHHHhcccCCCceeceeccCC--Cc--------cccccCHHHHhhhhcccCCCCCCCCCCCC
Q 030801 77 KPCCPELAGLVESNPICLCQLLGKN--NT--------YGIKIDITRALKLPSVCGVTTPPVNLCSL 132 (171)
Q Consensus 77 ~~CC~alk~l~~~~~~CLC~~~~~~--~~--------~gi~in~trA~~LP~~Cgv~~Pp~s~C~~ 132 (171)
.+||+.|+.+.+ ++.|.|..+... .. ..-.+ ..+|..||..||+..| ..|+-
T Consensus 429 ~~cc~~l~~~~~-~~~c~c~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~p~~c~~~~~--~~c~~ 490 (500)
T 3ob4_A 429 ERCCNELNEFEN-NQRCMCEALQQIMENQSDRLQGRQQEQQF-KRELRNLPQQCGLRAP--QRCDL 490 (500)
T ss_dssp HHHHHHHGGGTT-CHHHHHHHHHHHHHHHHTTCCSSHHHHHH-HHHHHTHHHHTTCCCC--SCCCC
T ss_pred HHHHHHHHhCCc-ccccccHHHHHHHHHHHHHhhhHHHHHHH-HHHHhhCchhcCCCCC--ccCCc
Confidence 689999999721 179999987542 00 00112 3458899999999853 46873
No 12
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=78.79 E-value=0.93 Score=32.46 Aligned_cols=72 Identities=21% Similarity=0.469 Sum_probs=48.2
Q ss_pred CCCchhhh--cc-cccCHHHhhCCC----CC------CCCCcchHHHHHhcccCCCceeceeccCC--Cccc---cccCH
Q 030801 49 EDDCLTKV--LN-MSDCLSYVTEGS----NV------TVPDKPCCPELAGLVESNPICLCQLLGKN--NTYG---IKIDI 110 (171)
Q Consensus 49 ~~~C~~~l--~~-L~pCl~yl~g~~----~~------~~Ps~~CC~alk~l~~~~~~CLC~~~~~~--~~~g---i~in~ 110 (171)
...|...+ .. |..|..||.... .- ...-..||.-|+.+ +..|.|..+... ..++ ..-..
T Consensus 8 ~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~---~~~CrC~al~~~~Q~q~~g~q~~~~~ 84 (103)
T 1s6d_A 8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVM 84 (103)
T ss_dssp SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHHH
T ss_pred CcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc---CcccCcHHHHHHHHHHhcchhHHHHH
Confidence 56798876 35 899999997421 00 12346899999997 789999987532 1111 11124
Q ss_pred HHHhhhhcccCCC
Q 030801 111 TRALKLPSVCGVT 123 (171)
Q Consensus 111 trA~~LP~~Cgv~ 123 (171)
.+|..||..|++.
T Consensus 85 q~A~~LP~~C~i~ 97 (103)
T 1s6d_A 85 SMAHNLPIECNLM 97 (103)
T ss_dssp HHHHHHHHHTTSS
T ss_pred HHHHhcHHhcCCC
Confidence 4677899999996
No 13
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=75.23 E-value=0.33 Score=34.99 Aligned_cols=75 Identities=21% Similarity=0.511 Sum_probs=46.3
Q ss_pred chhhhcc---cccCHHHhhC----CCCCCCC---------CcchHHHHHhcccCCCceeceeccCC--C-----cccc--
Q 030801 52 CLTKVLN---MSDCLSYVTE----GSNVTVP---------DKPCCPELAGLVESNPICLCQLLGKN--N-----TYGI-- 106 (171)
Q Consensus 52 C~~~l~~---L~pCl~yl~g----~~~~~~P---------s~~CC~alk~l~~~~~~CLC~~~~~~--~-----~~gi-- 106 (171)
|...+.. |.+|..|+.. ++....| -..||..|+.+ +..|.|..+... . .++-
T Consensus 5 C~~q~q~~q~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v---~~qCrC~al~~~v~~~~~qgq~~~~~ 81 (109)
T 1sm7_A 5 CQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQ 81 (109)
T ss_dssp HHTTHHHHCCCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTT---CHHHHTTTTHHHHHTSSCSSCCCTTH
T ss_pred hHHHHHcCccHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhc---CccCCCHHHHHHHHHHHHhcccchHH
Confidence 5555543 8999999973 1110111 25799999997 789999987532 0 0110
Q ss_pred -ccCHHHHhhhhcccCCCCCCCCCCC
Q 030801 107 -KIDITRALKLPSVCGVTTPPVNLCS 131 (171)
Q Consensus 107 -~in~trA~~LP~~Cgv~~Pp~s~C~ 131 (171)
.-...+|..||..||+..+ ..|.
T Consensus 82 ~~~~~~~a~~LP~~Cnl~~~--~~C~ 105 (109)
T 1sm7_A 82 STRIYQIAKNLPNVCNMKQI--GTCP 105 (109)
T ss_dssp HHHHHHTTSSHHHHSCCCSS--CSSC
T ss_pred HHHHHHHHHhCHHhcCCCCC--CCCC
Confidence 0123346779999999743 3565
No 14
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=62.09 E-value=1 Score=30.36 Aligned_cols=52 Identities=27% Similarity=0.539 Sum_probs=35.0
Q ss_pred CCcchHHHHHhcccCCCceeceeccCC-----C--cccc---ccCHHHHhhhhcccCCCCCCCCCCC
Q 030801 75 PDKPCCPELAGLVESNPICLCQLLGKN-----N--TYGI---KIDITRALKLPSVCGVTTPPVNLCS 131 (171)
Q Consensus 75 Ps~~CC~alk~l~~~~~~CLC~~~~~~-----~--~~gi---~in~trA~~LP~~Cgv~~Pp~s~C~ 131 (171)
.-..||.-|+.+ +..|.|..+... . .++- .-...+|..||..||+..+ ..|.
T Consensus 10 ~~qqCC~qL~~~---~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~--~~C~ 71 (75)
T 1pnb_B 10 LREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI--GTCP 71 (75)
T ss_dssp CTHHHHHHHHTS---CGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT--CCCC
T ss_pred HHHHHHHHHHhC---CcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC--CCCC
Confidence 446899999997 789999987532 0 0110 1124567779999999753 4565
No 15
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=56.37 E-value=0.63 Score=33.98 Aligned_cols=77 Identities=25% Similarity=0.599 Sum_probs=46.7
Q ss_pred CCchhhh---cccccCHHHhhC----CCCCCCCC-------cchHHHHHhcccCCCceeceeccCC-C----c---cc-c
Q 030801 50 DDCLTKV---LNMSDCLSYVTE----GSNVTVPD-------KPCCPELAGLVESNPICLCQLLGKN-N----T---YG-I 106 (171)
Q Consensus 50 ~~C~~~l---~~L~pCl~yl~g----~~~~~~Ps-------~~CC~alk~l~~~~~~CLC~~~~~~-~----~---~g-i 106 (171)
..|...+ ..|..|..||.. ++...... ..||+-|+.+ +..|.|..+... . . ++ -
T Consensus 6 q~C~~q~q~~~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv---~~~CrC~aL~~~v~~~~qq~~~~~~~ 82 (114)
T 2lvf_A 6 EECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRGE 82 (114)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHS---CHHHHHHHHHHHHHHHHHHHCCCCSH
T ss_pred HhhHHHHHHhHhHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHC---CcCccCHHHHHHHHHHHHHHhhhhhh
Confidence 3466543 358899999962 21111111 2399999997 889999977533 0 0 00 0
Q ss_pred --ccCHHHHhhhhcccCCCCCCCCCCCC
Q 030801 107 --KIDITRALKLPSVCGVTTPPVNLCSL 132 (171)
Q Consensus 107 --~in~trA~~LP~~Cgv~~Pp~s~C~~ 132 (171)
.==...|..||+.||+. | ..|.-
T Consensus 83 ~~~~~~q~A~~LP~~C~i~--p-~~C~f 107 (114)
T 2lvf_A 83 QMRRMMRLAENIPSRCNLS--P-MRCPM 107 (114)
T ss_dssp HHHHHHHHHHHHHHHHCCC--C-SCCTT
T ss_pred HHHHHHHHHHhChHhcCCC--c-ccCCC
Confidence 00124577899999997 2 35764
No 16
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=51.01 E-value=1.2 Score=29.89 Aligned_cols=50 Identities=24% Similarity=0.658 Sum_probs=34.0
Q ss_pred cchHHHHHhcccCCCceeceeccCCC-------c-ccc---ccCHHHHhhhhcccCCCCCCCCCCC
Q 030801 77 KPCCPELAGLVESNPICLCQLLGKNN-------T-YGI---KIDITRALKLPSVCGVTTPPVNLCS 131 (171)
Q Consensus 77 ~~CC~alk~l~~~~~~CLC~~~~~~~-------~-~gi---~in~trA~~LP~~Cgv~~Pp~s~C~ 131 (171)
..||+-|+.+ +..|.|..+...- . .|. .-...+|..||..||+..+ ..|+
T Consensus 8 qqCC~eL~~~---~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~--~~C~ 68 (72)
T 2ds2_B 8 RQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI--GACP 68 (72)
T ss_dssp HHHHHHHTTS---CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTC--CCCC
T ss_pred HHHHHHHHhc---CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCC--CcCC
Confidence 4799999997 8899999876420 0 110 1235567789999999642 3565
No 17
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=46.37 E-value=2.9 Score=30.89 Aligned_cols=72 Identities=21% Similarity=0.422 Sum_probs=44.3
Q ss_pred cccccCHHHhhCC---CCCCCC----CcchHHHHHhcccCCCceeceeccCC--Ccc-------cc--c-c-------CH
Q 030801 57 LNMSDCLSYVTEG---SNVTVP----DKPCCPELAGLVESNPICLCQLLGKN--NTY-------GI--K-I-------DI 110 (171)
Q Consensus 57 ~~L~pCl~yl~g~---~~~~~P----s~~CC~alk~l~~~~~~CLC~~~~~~--~~~-------gi--~-i-------n~ 110 (171)
..|..|.+||... .....| -..||.-|+++ +..|.|..+... ..+ |. . + -.
T Consensus 15 ~~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~ 91 (122)
T 1b1u_A 15 NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQR 91 (122)
T ss_dssp STTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHS---CHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHH
T ss_pred ccchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhC---CccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHH
Confidence 3577899999631 101223 24699999997 689999876432 011 10 0 0 11
Q ss_pred HHHhhh--hcccCCCCCCC-CCCC
Q 030801 111 TRALKL--PSVCGVTTPPV-NLCS 131 (171)
Q Consensus 111 trA~~L--P~~Cgv~~Pp~-s~C~ 131 (171)
..|..| |..||+.++++ ..|.
T Consensus 92 ~~A~~Lv~P~~Cnl~~~~g~~~C~ 115 (122)
T 1b1u_A 92 AFAPKLVTEVECNLATIHGGPFCL 115 (122)
T ss_dssp HHGGGTTSTTTTCCCCTTSSSCCS
T ss_pred HHHHhcCCcccCCCCCCCCCcccc
Confidence 357779 99999998754 3554
No 18
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=44.51 E-value=7.7 Score=28.79 Aligned_cols=72 Identities=26% Similarity=0.480 Sum_probs=45.5
Q ss_pred ccccCHHHhhC----CCCCCCC----CcchHHHHHhcccCCCceeceeccCC--Cc---------ccc--cc-------C
Q 030801 58 NMSDCLSYVTE----GSNVTVP----DKPCCPELAGLVESNPICLCQLLGKN--NT---------YGI--KI-------D 109 (171)
Q Consensus 58 ~L~pCl~yl~g----~~~~~~P----s~~CC~alk~l~~~~~~CLC~~~~~~--~~---------~gi--~i-------n 109 (171)
.|..|..||.. .+ ...| -..||.-|+++ ...|.|..+... .. -|. .+ -
T Consensus 16 pL~~CR~Yv~~q~C~~g-~~~p~e~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~ 91 (127)
T 1bea_A 16 PLPSCRWYVTSRTCGIG-PRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQ 91 (127)
T ss_dssp CCHHHHHHHHHHHHSCC-CSSCHHHHHHHHHHHHHTS---CGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHH
T ss_pred cchHHHHHHHHhhcccC-CCCchHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhcccccccccccccccCCCcHHHH
Confidence 57789999962 11 1223 24599999997 789999976422 00 111 01 1
Q ss_pred HHHHhhh--hcccCCCCCCC-CCCCCC
Q 030801 110 ITRALKL--PSVCGVTTPPV-NLCSLA 133 (171)
Q Consensus 110 ~trA~~L--P~~Cgv~~Pp~-s~C~~~ 133 (171)
...|..| |..||+..+++ ..|...
T Consensus 92 ~~~A~~Lv~P~~Cnl~~~~g~~~C~~~ 118 (127)
T 1bea_A 92 RGFAATLVTEAECNLATISGVAECPWI 118 (127)
T ss_dssp HHHHTTTTSTTTTCCCCTTSSSCCTTT
T ss_pred HHHHHhcCCcccCCCCCCCCCCCCCcc
Confidence 3347779 99999988744 367654
No 19
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=42.14 E-value=4.5 Score=30.00 Aligned_cols=84 Identities=19% Similarity=0.499 Sum_probs=52.9
Q ss_pred CCCCCCCchhhh--cccccCHHHhhCCC--CC----C--CC-------CcchHHHHHhcccCCCceeceeccCC------
Q 030801 45 SPSPEDDCLTKV--LNMSDCLSYVTEGS--NV----T--VP-------DKPCCPELAGLVESNPICLCQLLGKN------ 101 (171)
Q Consensus 45 ap~~~~~C~~~l--~~L~pCl~yl~g~~--~~----~--~P-------s~~CC~alk~l~~~~~~CLC~~~~~~------ 101 (171)
..+....|...+ ..|..|..||.... .. . .. -..||.-|+.+. ++..|.|..+...
T Consensus 9 ~~~~~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~-~~~qCrCeaL~q~~Q~qq~ 87 (127)
T 1w2q_A 9 RQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCD 87 (127)
T ss_dssp CCSTTCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTS-CCCTTHHHHHHHHHHHSCT
T ss_pred CCCcccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhc-cCCCccCHHHHHHHHHHHh
Confidence 334467798876 47999999997421 00 0 11 257999999963 3689999987642
Q ss_pred CccccccC---HHHHhhhhcccCCCCCCCCCCC
Q 030801 102 NTYGIKID---ITRALKLPSVCGVTTPPVNLCS 131 (171)
Q Consensus 102 ~~~gi~in---~trA~~LP~~Cgv~~Pp~s~C~ 131 (171)
..-+-.+. ..+|..||..|++.-| ..|.
T Consensus 88 q~~gqq~~~~~~q~A~~LP~~C~i~~~--~~C~ 118 (127)
T 1w2q_A 88 RLQDRQMVQQFKRELMSLPQQCNFRAP--QRCD 118 (127)
T ss_dssp TTTTSTTHHHHHHHHHHHHHHHTCCCS--SCCS
T ss_pred hhhhHHHHHHHHHHHHHhHHhcCCCCC--CcCC
Confidence 00111112 3557789999999543 3465
No 20
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=22.61 E-value=42 Score=24.48 Aligned_cols=71 Identities=25% Similarity=0.535 Sum_probs=47.2
Q ss_pred CCCchhhh--cccccCHHHhhCCC-CC-------CCC-----------CcchHHHHHhcccCCCceeceeccCC------
Q 030801 49 EDDCLTKV--LNMSDCLSYVTEGS-NV-------TVP-----------DKPCCPELAGLVESNPICLCQLLGKN------ 101 (171)
Q Consensus 49 ~~~C~~~l--~~L~pCl~yl~g~~-~~-------~~P-----------s~~CC~alk~l~~~~~~CLC~~~~~~------ 101 (171)
...|...+ ..|.+|..||.... .. ..| -..||..|+.+ +..|.|..+...
T Consensus 15 ~q~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~---~~~C~C~aL~~~v~~~~q 91 (125)
T 1psy_A 15 SQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQ 91 (125)
T ss_dssp SSSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhc---CcccccHHHHHHHHHHHH
Confidence 46798877 57999999997420 00 012 25799999996 889999988432
Q ss_pred --Ccccc--ccCHHHHhhhhcccCC
Q 030801 102 --NTYGI--KIDITRALKLPSVCGV 122 (171)
Q Consensus 102 --~~~gi--~in~trA~~LP~~Cgv 122 (171)
..-|- .=-..+|..||..||+
T Consensus 92 Qgq~~gqq~~~~~q~A~~LP~~C~i 116 (125)
T 1psy_A 92 QGQLHGEESERVAQRAGEIVSSCGV 116 (125)
T ss_dssp HTTCCTTCSHHHHHHHHHHHHHHTC
T ss_pred HhhhhHHHHHHHHHHHHhhHHHcCC
Confidence 01111 0123457779999999
Done!