BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030804
(171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SX68|RK18_ARATH 50S ribosomal protein L18, chloroplastic OS=Arabidopsis thaliana
GN=RPL18 PE=1 SV=1
Length = 170
Score = 234 bits (596), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/170 (70%), Positives = 136/170 (80%), Gaps = 5/170 (2%)
Query: 3 AGASSVWML-NQSSFLGSCQQLSSVSKLVASRRPRPAPPSLFIVEASTRPRTKREDRTAR 61
+G SV ++ N+S+FLG+ Q +V + +VEA T+ T EDR AR
Sbjct: 5 SGCGSVSLITNRSAFLGNGLQHRAV--FLKPWSSSSLQSRSMVVEAKTK--TSSEDRIAR 60
Query: 62 HSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEELDYSSGPT 121
HSRIRKK++GT ERPRLCVFRSNKHLYVQVIDDTKMHTLASAST QKPISEE DY+SGPT
Sbjct: 61 HSRIRKKVNGTTERPRLCVFRSNKHLYVQVIDDTKMHTLASASTKQKPISEEFDYTSGPT 120
Query: 122 IEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
IEV+KKVGE+IAKSCLEKGITKVAFDRGGYPYHGRI+ALA AARE+GLQF
Sbjct: 121 IEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALAAAAREHGLQF 170
>sp|Q8SAY0|RK18_ORYSJ 50S ribosomal protein L18, chloroplastic OS=Oryza sativa subsp.
japonica GN=RPL18 PE=2 SV=1
Length = 170
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 106/129 (82%)
Query: 43 FIVEASTRPRTKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLAS 102
+V A + T + DR ARH R+RKK+ GT ERPRL VFRSNKHLY QVIDDTK TL S
Sbjct: 42 LVVVAKVKVSTPQADRIARHVRLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTLVS 101
Query: 103 ASTMQKPISEELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALAD 162
ASTM K +S++L+YS+GPT+EV++K+GE+IAKSCLEKGITKV FDRGG+ YHGRI+ALAD
Sbjct: 102 ASTMHKSLSKDLEYSAGPTVEVAQKIGEVIAKSCLEKGITKVVFDRGGFLYHGRIKALAD 161
Query: 163 AAREYGLQF 171
AARE GL F
Sbjct: 162 AARENGLDF 170
>sp|Q5L3S3|RL18_GEOKA 50S ribosomal protein L18 OS=Geobacillus kaustophilus (strain
HTA426) GN=rplR PE=3 SV=1
Length = 120
Score = 156 bits (394), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 86/114 (75%), Gaps = 4/114 (3%)
Query: 58 RTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEELDYS 117
R RH+RIRKKI GT ERPRL VFRSNKH+Y Q+IDDTK T+ SAST+ K E
Sbjct: 11 RKKRHARIRKKIFGTAERPRLSVFRSNKHIYAQIIDDTKSSTIVSASTLDK----EFGLD 66
Query: 118 SGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
S IE +KKVGE++AK LEKGI KV FDRGGY YHGR++ALADAARE GL+F
Sbjct: 67 STNNIEAAKKVGELVAKRALEKGIKKVVFDRGGYLYHGRVKALADAAREAGLEF 120
>sp|C5D3T3|RL18_GEOSW 50S ribosomal protein L18 OS=Geobacillus sp. (strain WCH70) GN=rplR
PE=3 SV=1
Length = 120
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 86/114 (75%), Gaps = 4/114 (3%)
Query: 58 RTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEELDYS 117
R RH+R+RKKI GT ERPRL VFRSNKH+Y Q+IDD K T+ SAST+ K E D
Sbjct: 11 RKKRHARVRKKIFGTAERPRLNVFRSNKHIYAQIIDDMKAVTIVSASTLDK----EFDLE 66
Query: 118 SGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
S IE +KKVGE++AK LEKGI KV FDRGGY YHGR++ALADAARE GL+F
Sbjct: 67 STGNIEAAKKVGELVAKRALEKGIKKVVFDRGGYLYHGRVKALADAAREAGLEF 120
>sp|P09415|RL18_GEOSE 50S ribosomal protein L18 OS=Geobacillus stearothermophilus GN=rplR
PE=1 SV=1
Length = 120
Score = 154 bits (389), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 86/114 (75%), Gaps = 4/114 (3%)
Query: 58 RTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEELDYS 117
R RH+RIRKKI GT ERPRL VFRSNKH+Y Q+IDDTK T+ SAST+ K E
Sbjct: 11 RKKRHARIRKKIFGTTERPRLSVFRSNKHIYAQIIDDTKSATIVSASTLDK----EFGLD 66
Query: 118 SGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
S IE +KKVGE++AK LEKGI +V FDRGGY YHGR++ALADAARE GL+F
Sbjct: 67 STNNIEAAKKVGELVAKRALEKGIKQVVFDRGGYLYHGRVKALADAAREAGLEF 120
>sp|A4IJK4|RL18_GEOTN 50S ribosomal protein L18 OS=Geobacillus thermodenitrificans
(strain NG80-2) GN=rplR PE=3 SV=1
Length = 120
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 87/114 (76%), Gaps = 4/114 (3%)
Query: 58 RTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEELDYS 117
R RH+RIRKKI GT ERPRL VFRSNKH+Y Q+IDD K T+ SAST+ K S LD
Sbjct: 11 RKKRHARIRKKIFGTAERPRLSVFRSNKHIYAQIIDDVKSATIVSASTLDKEFS--LD-- 66
Query: 118 SGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
S I+ +KKVGE++AK LEKGI +V FDRGGY YHGR++ALADAARE GL+F
Sbjct: 67 STNNIDAAKKVGELVAKRALEKGIKQVVFDRGGYLYHGRVKALADAAREAGLEF 120
>sp|Q8YPJ4|RL18_NOSS1 50S ribosomal protein L18 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rplR PE=3 SV=1
Length = 120
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 90/119 (75%), Gaps = 2/119 (1%)
Query: 53 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISE 112
T+RE + RH R+R K+ G+PERPRL VFRSN+H+Y QVIDDT+ HTLA+AST++ +
Sbjct: 4 TRRESKERRHRRVRGKVQGSPERPRLAVFRSNEHIYAQVIDDTQHHTLAAASTVEPELKS 63
Query: 113 ELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L +SG E S ++G++IA LEKGITKV FDRGG YHGRI+ALA+AARE GL F
Sbjct: 64 SL--ASGSNCEASAQIGKLIAARSLEKGITKVVFDRGGNLYHGRIKALAEAAREAGLDF 120
>sp|Q3MFA6|RL18_ANAVT 50S ribosomal protein L18 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rplR PE=3 SV=1
Length = 120
Score = 149 bits (376), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 89/119 (74%), Gaps = 2/119 (1%)
Query: 53 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISE 112
T+RE + RH R+R K+ G+PERPRL VFRSN+H+Y QVIDDT+ HTL SAST++ +
Sbjct: 4 TRRESKQRRHRRVRGKVQGSPERPRLAVFRSNEHIYAQVIDDTQHHTLVSASTVEPEVKS 63
Query: 113 ELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L +SG E S ++G++IA LEKGITKV FDRGG YHGRI+ALA+AARE GL F
Sbjct: 64 SL--ASGANCEASSQIGKLIAVRSLEKGITKVVFDRGGNLYHGRIKALAEAAREAGLDF 120
>sp|B7KI02|RL18_CYAP7 50S ribosomal protein L18 OS=Cyanothece sp. (strain PCC 7424)
GN=rplR PE=3 SV=1
Length = 120
Score = 149 bits (376), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 52 RTKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPIS 111
RT+ E RHSRIR+K++GTP RPRL VFRSN H+Y QVIDD HTL +AST+ K +
Sbjct: 3 RTRTESVQRRHSRIRRKVEGTPSRPRLAVFRSNNHIYAQVIDDVAQHTLVAASTLDKDLK 62
Query: 112 EELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
E +SSG T E S+ VG+++A+ L KGI KV FDRGG YHGRI+ALA AARE GL F
Sbjct: 63 GE--FSSGATCEASEAVGKLVAQRALAKGIEKVVFDRGGNLYHGRIRALAQAAREAGLDF 120
>sp|Q65P91|RL18_BACLD 50S ribosomal protein L18 OS=Bacillus licheniformis (strain DSM 13
/ ATCC 14580) GN=rplR PE=3 SV=1
Length = 120
Score = 147 bits (370), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 84/119 (70%), Gaps = 4/119 (3%)
Query: 53 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISE 112
+K R RH+R+R K+ GTPERPRL VFRSNKH+Y QVIDD TL SAST+ K +
Sbjct: 6 SKNAARLKRHARVRAKLSGTPERPRLNVFRSNKHIYAQVIDDVNGVTLVSASTLDKDFNA 65
Query: 113 ELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
E +G + KVGE++AK EKGIT V FDRGGY YHGR++ALADAARE GL+F
Sbjct: 66 E----NGSDTAAAAKVGELVAKRASEKGITNVVFDRGGYLYHGRVKALADAAREAGLEF 120
>sp|B5YDV9|RL18_DICT6 50S ribosomal protein L18 OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=rplR PE=3 SV=1
Length = 122
Score = 146 bits (368), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 91/121 (75%), Gaps = 2/121 (1%)
Query: 51 PRTKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPI 110
R+++E R RH RIRKKI GT ERPRL V++S +++Y Q+IDDTK HTL SAS+++K I
Sbjct: 4 KRSRKELRKIRHLRIRKKIIGTSERPRLAVYKSLRYIYAQIIDDTKGHTLVSASSLEKEI 63
Query: 111 SEELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQ 170
+L S IE +K VGE+IAK LEKGI KV FDRGG+ YHG+++ALAD+AR GL+
Sbjct: 64 RSQL--KSTKNIEAAKLVGEVIAKRALEKGIKKVVFDRGGFLYHGKVKALADSARAAGLE 121
Query: 171 F 171
F
Sbjct: 122 F 122
>sp|A7HM36|RL18_FERNB 50S ribosomal protein L18 OS=Fervidobacterium nodosum (strain ATCC
35602 / DSM 5306 / Rt17-B1) GN=rplR PE=3 SV=1
Length = 122
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 91/122 (74%), Gaps = 6/122 (4%)
Query: 54 KREDR----TARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKP 109
KREDR RH R+RKKI GTPERPRL VFRS KH+Y Q+IDDTK TL +AST++K
Sbjct: 3 KREDRRQLRLVRHKRLRKKIFGTPERPRLAVFRSEKHMYAQIIDDTKGITLVAASTVEKA 62
Query: 110 ISEELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGL 169
+ E+L + I +K+VG++IA+ L KGI +V FDRGG+ YHGR++ALADAARE GL
Sbjct: 63 MKEKLQKTW--NITAAKEVGKLIAERALAKGIKEVVFDRGGFKYHGRVKALADAAREAGL 120
Query: 170 QF 171
+F
Sbjct: 121 KF 122
>sp|A4XLR4|RL18_CALS8 50S ribosomal protein L18 OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=rplR PE=3 SV=2
Length = 124
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 89/119 (74%), Gaps = 2/119 (1%)
Query: 53 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISE 112
+ E R RH RIRKK+ GT ERPRLCV++S K++Y Q+IDD K HTL +AS+++ I
Sbjct: 8 NRNEKRLIRHKRIRKKVFGTAERPRLCVYKSLKYIYAQIIDDEKGHTLVAASSLEPEIKS 67
Query: 113 ELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L +S +IE ++ +G +IA+ EKGITKV FDRGGYPYHGR++ALADAARE GL+F
Sbjct: 68 RL--TSTKSIEAAQYIGRVIAERAKEKGITKVVFDRGGYPYHGRVKALADAAREAGLEF 124
>sp|B0C1E8|RL18_ACAM1 50S ribosomal protein L18 OS=Acaryochloris marina (strain MBIC
11017) GN=rplR PE=3 SV=1
Length = 118
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 89/119 (74%), Gaps = 4/119 (3%)
Query: 53 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISE 112
T+R+ +RH R+R+K+ GT ERPRL VFRSN+H+Y QVIDD + HTLA+AST++
Sbjct: 4 TRRDATRSRHQRVRRKVVGTAERPRLAVFRSNQHIYAQVIDDAQQHTLAAASTVE----S 59
Query: 113 ELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
+L SSG T + S VG+++A+ +EKGI V FDRGG YHGR++ALADAARE GL+F
Sbjct: 60 DLKSSSGATCDASTAVGKLVAERAIEKGIKAVVFDRGGNLYHGRVKALADAAREAGLEF 118
>sp|P46899|RL18_BACSU 50S ribosomal protein L18 OS=Bacillus subtilis (strain 168) GN=rplR
PE=1 SV=1
Length = 120
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 87/119 (73%), Gaps = 4/119 (3%)
Query: 53 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISE 112
+K R RH+R+R K+ GT ERPRL VFRSNKH+Y Q+IDD TLASAST+ K ++
Sbjct: 6 SKNAARLKRHARVRAKLSGTAERPRLNVFRSNKHIYAQIIDDVNGVTLASASTLDKDLNV 65
Query: 113 ELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
E S+G T + KVGE++AK EKGI+ V FDRGGY YHGR++ALADAARE GL+F
Sbjct: 66 E---STGDT-SAATKVGELVAKRAAEKGISDVVFDRGGYLYHGRVKALADAAREAGLKF 120
>sp|O67564|RL18_AQUAE 50S ribosomal protein L18 OS=Aquifex aeolicus (strain VF5) GN=rplR
PE=3 SV=1
Length = 124
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 86/122 (70%)
Query: 50 RPRTKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKP 109
R +T+RE R RH RIRKK+ GTPERPRLCV+RS KH Y Q+IDDT HTL SAST+
Sbjct: 3 RLKTRREKRLRRHKRIRKKVFGTPERPRLCVYRSLKHFYAQIIDDTIGHTLVSASTLDPE 62
Query: 110 ISEELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGL 169
+ G +I+ ++ V E+IA+ LEKGI KV FDRGG+ YHG+I+A AD RE GL
Sbjct: 63 FEKITGKRGGKSIKDAEVVAEIIARRALEKGIKKVVFDRGGFKYHGKIKAFADKCREMGL 122
Query: 170 QF 171
+F
Sbjct: 123 EF 124
>sp|B9DM31|RL18_STACT 50S ribosomal protein L18 OS=Staphylococcus carnosus (strain TM300)
GN=rplR PE=3 SV=1
Length = 120
Score = 143 bits (360), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 84/118 (71%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K + R RH+R+R + GT ++PRL V+RSNKH+Y Q+IDDTK TL AST K E
Sbjct: 7 KNKVRLKRHARVRSNLSGTAQKPRLNVYRSNKHIYAQIIDDTKGVTLVQASTQDKDFENE 66
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
+G +E+S KVGE IAK +KGIT++ FDRGGY YHGR++ALADAARE GLQF
Sbjct: 67 ----TGSKVELSSKVGEAIAKKAADKGITEIVFDRGGYLYHGRVKALADAARENGLQF 120
>sp|Q18CH4|RL18_CLOD6 50S ribosomal protein L18 OS=Clostridium difficile (strain 630)
GN=rplR PE=3 SV=1
Length = 122
Score = 143 bits (360), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 87/118 (73%), Gaps = 2/118 (1%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K +R RH R+R+KI GT +RPRLCVFRS ++Y Q+IDDTK TL +AS+++ +
Sbjct: 7 KNANRLQRHKRVRRKISGTSQRPRLCVFRSANNIYAQIIDDTKRVTLVAASSLEAEVKSA 66
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
++++ E +KKVGE++AK +EKGIT+V FDRGGY YHGRIQ LA+ ARE GL+F
Sbjct: 67 VNHTGNK--EAAKKVGELVAKKAVEKGITEVVFDRGGYLYHGRIQELAEGAREAGLKF 122
>sp|Q49ZF2|RL18_STAS1 50S ribosomal protein L18 OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=rplR
PE=3 SV=1
Length = 120
Score = 143 bits (360), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 85/118 (72%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K + R RH+R+R K+ GT E+PRL ++RSNKH+Y QVIDD TLA AST +K ++ E
Sbjct: 7 KNKVRLKRHARVRNKLAGTAEKPRLNIYRSNKHIYAQVIDDVSGKTLAQASTQEKDLANE 66
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
SG +E+S KVGE +AK EKG+ + FDRGGY YHGR++ALADAARE GL+F
Sbjct: 67 ----SGSKVELSAKVGETVAKRASEKGVKTIVFDRGGYLYHGRVKALADAARENGLEF 120
>sp|A7GK36|RL18_BACCN 50S ribosomal protein L18 OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=rplR PE=3 SV=1
Length = 120
Score = 143 bits (360), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 85/118 (72%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD K TL SAST+ K +
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVKGVTLVSASTLDK----D 62
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L + IE + KVGE++AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 63 LALNGTGNIEAATKVGELVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
>sp|B9KZX2|RL18_THERP 50S ribosomal protein L18 OS=Thermomicrobium roseum (strain ATCC
27502 / DSM 5159 / P-2) GN=rplR PE=3 SV=1
Length = 124
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 84/114 (73%), Gaps = 1/114 (0%)
Query: 58 RTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEELDYS 117
R RH R+R K+ GTPERPRL VFRSNKH+Y Q+IDDT+ HTL +AST++K + E
Sbjct: 12 RKRRHLRVRAKVFGTPERPRLNVFRSNKHIYAQIIDDTRGHTLVAASTLEKEVRERFP-D 70
Query: 118 SGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
P IE ++ VG+++ + L KGIT+V FDRGGY YHGR++ALAD AR GLQF
Sbjct: 71 PHPKIEEARIVGQVVGERALAKGITRVVFDRGGYKYHGRVKALADGARAAGLQF 124
>sp|Q9ZI37|RL18_AQUPY 50S ribosomal protein L18 OS=Aquifex pyrophilus GN=rplR PE=3 SV=1
Length = 124
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 85/122 (69%)
Query: 50 RPRTKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKP 109
R +T+RE R RH RIRKK+ GTPERPRLCV+RS H Y Q+IDDT HTL SAST+
Sbjct: 3 RLKTRREKRLRRHKRIRKKVFGTPERPRLCVYRSLNHFYAQIIDDTIGHTLVSASTLDPE 62
Query: 110 ISEELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGL 169
+ G +I+ ++ V E+IA+ LEKGI KV FDRGG+ YHG+I+A AD RE GL
Sbjct: 63 FEKITGKRGGKSIKDAEVVAEIIARRALEKGIKKVVFDRGGFKYHGKIKAFADKCREMGL 122
Query: 170 QF 171
+F
Sbjct: 123 EF 124
>sp|B2ITP0|RL18_NOSP7 50S ribosomal protein L18 OS=Nostoc punctiforme (strain ATCC 29133
/ PCC 73102) GN=rplR PE=3 SV=1
Length = 120
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 88/119 (73%), Gaps = 2/119 (1%)
Query: 53 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISE 112
T+RE + RH R+R K+ G+PERPRL VFRSN+H+Y QVIDD++ T+ +AST++ +
Sbjct: 4 TRRESKNRRHRRVRGKVVGSPERPRLAVFRSNEHIYAQVIDDSQHQTIVAASTLEPELKS 63
Query: 113 ELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L +SG + S +VG++IA LEKGITKV FDRGG YHGR++ALADAARE GL F
Sbjct: 64 SL--ASGANRDASVQVGKLIAVRSLEKGITKVVFDRGGNLYHGRVKALADAAREAGLDF 120
>sp|A7Z0Q4|RL18_BACA2 50S ribosomal protein L18 OS=Bacillus amyloliquefaciens (strain
FZB42) GN=rplR PE=3 SV=1
Length = 120
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 87/119 (73%), Gaps = 4/119 (3%)
Query: 53 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISE 112
+K R RH+R+R K+ GT ERPRL VFRSNKH+Y Q+IDD TLASAST+ K ++
Sbjct: 6 SKNAARQKRHARVRAKLSGTAERPRLNVFRSNKHIYAQIIDDVNGVTLASASTLDKDLNV 65
Query: 113 ELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
E S+G + + KVGE++AK EKG++ V FDRGGY YHGR++ALADAARE GL+F
Sbjct: 66 E---STGDSAAAA-KVGELVAKRASEKGVSDVVFDRGGYLYHGRVKALADAAREAGLKF 120
>sp|B8G6Q9|RL18_CHLAD 50S ribosomal protein L18 OS=Chloroflexus aggregans (strain MD-66 /
DSM 9485) GN=rplR PE=3 SV=1
Length = 120
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 90/123 (73%), Gaps = 9/123 (7%)
Query: 52 RTKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPIS 111
RT RE R RH+RIRK++ GTPERPRL VFRS+ H+Y QVIDDT HTL +AST++K
Sbjct: 4 RTPRELRLRRHNRIRKRVSGTPERPRLNVFRSHAHIYAQVIDDTVGHTLVAASTIEK--- 60
Query: 112 EELDYSSGPTIEVSKK---VGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYG 168
+S P + +++ VG++IA+ L+ GITKV FDRGGY YHGR++ALA+AARE G
Sbjct: 61 ---GWSGSPELTKTQEAALVGKLIAERALQAGITKVVFDRGGYKYHGRVKALAEAAREAG 117
Query: 169 LQF 171
L F
Sbjct: 118 LNF 120
>sp|Q9Z9J8|RL18_BACHD 50S ribosomal protein L18 OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=rplR PE=3 SV=1
Length = 120
Score = 140 bits (353), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 87/123 (70%), Gaps = 5/123 (4%)
Query: 49 TRPRTKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQK 108
T+P K R RH+ +R+ I GTPERPRL VFRS+KH+Y Q+IDD T+A+AS++ K
Sbjct: 3 TKP-IKNVARKKRHAHVRRTITGTPERPRLNVFRSSKHIYAQLIDDVNGVTVAAASSLDK 61
Query: 109 PISEELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYG 168
EL +G +E +KKVGE++AK LEKG + FDRGGY YHGR+ +LADAARE G
Sbjct: 62 ----ELKLENGGNVEAAKKVGELVAKRALEKGYKTIVFDRGGYVYHGRVASLADAAREAG 117
Query: 169 LQF 171
LQF
Sbjct: 118 LQF 120
>sp|Q110C2|RL18_TRIEI 50S ribosomal protein L18 OS=Trichodesmium erythraeum (strain
IMS101) GN=rplR PE=3 SV=1
Length = 120
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 86/119 (72%), Gaps = 2/119 (1%)
Query: 53 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISE 112
T+++ RH R+RKK+ GT ERPRL VFRSN H+Y QVIDDTK HTL +AST++ +
Sbjct: 4 TRKDSIIKRHRRVRKKVFGTSERPRLSVFRSNMHIYAQVIDDTKQHTLVAASTLEAEVKS 63
Query: 113 ELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
+ SG + S ++G++IA+ LEKGI KV FDRGG YHGR++ALA+AARE GL F
Sbjct: 64 TI--KSGANCDASIQIGKLIAQRSLEKGIEKVVFDRGGNLYHGRVKALAEAAREAGLDF 120
>sp|Q6HPP2|RL18_BACHK 50S ribosomal protein L18 OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=rplR PE=3 SV=1
Length = 120
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----D 62
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 63 LALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
>sp|Q63H74|RL18_BACCZ 50S ribosomal protein L18 OS=Bacillus cereus (strain ZK / E33L)
GN=rplR PE=3 SV=1
Length = 120
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----D 62
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 63 LALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
>sp|Q81J26|RL18_BACCR 50S ribosomal protein L18 OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=rplR PE=3 SV=1
Length = 120
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----D 62
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 63 LALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
>sp|B9IZL0|RL18_BACCQ 50S ribosomal protein L18 OS=Bacillus cereus (strain Q1) GN=rplR
PE=3 SV=1
Length = 120
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----D 62
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 63 LALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
>sp|B7HQW0|RL18_BACC7 50S ribosomal protein L18 OS=Bacillus cereus (strain AH187) GN=rplR
PE=3 SV=1
Length = 120
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----D 62
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 63 LALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
>sp|B7HJ64|RL18_BACC4 50S ribosomal protein L18 OS=Bacillus cereus (strain B4264) GN=rplR
PE=3 SV=1
Length = 120
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----D 62
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 63 LALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
>sp|C1ET55|RL18_BACC3 50S ribosomal protein L18 OS=Bacillus cereus (strain 03BB102)
GN=rplR PE=3 SV=1
Length = 120
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----D 62
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 63 LALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
>sp|Q73F80|RL18_BACC1 50S ribosomal protein L18 OS=Bacillus cereus (strain ATCC 10987)
GN=rplR PE=3 SV=1
Length = 120
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----D 62
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 63 LALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
>sp|Q81VR4|RL18_BACAN 50S ribosomal protein L18 OS=Bacillus anthracis GN=rplR PE=3 SV=1
Length = 120
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----D 62
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 63 LALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
>sp|C3LJ98|RL18_BACAC 50S ribosomal protein L18 OS=Bacillus anthracis (strain CDC 684 /
NRRL 3495) GN=rplR PE=3 SV=1
Length = 120
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----D 62
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 63 LALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
>sp|C3P9S1|RL18_BACAA 50S ribosomal protein L18 OS=Bacillus anthracis (strain A0248)
GN=rplR PE=3 SV=1
Length = 120
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----D 62
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 63 LALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
>sp|B9K8A2|RL18_THENN 50S ribosomal protein L18 OS=Thermotoga neapolitana (strain ATCC
49049 / DSM 4359 / NS-E) GN=rplR PE=3 SV=1
Length = 122
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 80/105 (76%), Gaps = 2/105 (1%)
Query: 67 KKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEELDYSSGPTIEVSK 126
KK+ GTPERPRLCVFRSNKH+Y Q+IDDT HTL SAST+ + E+L + IE +K
Sbjct: 20 KKVFGTPERPRLCVFRSNKHIYAQIIDDTIGHTLVSASTLDPELREKLQKTW--NIEAAK 77
Query: 127 KVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
+VG +I K +EKGI KV FDRGGY YHGR++ALAD ARE GL+F
Sbjct: 78 EVGLLIGKRAIEKGIKKVVFDRGGYKYHGRVKALADGAREAGLEF 122
>sp|B7K233|RL18_CYAP8 50S ribosomal protein L18 OS=Cyanothece sp. (strain PCC 8801)
GN=rplR PE=3 SV=1
Length = 120
Score = 139 bits (350), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 2/119 (1%)
Query: 53 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISE 112
+++E RH RIRKK++GTP PRL VFRSN H+Y Q+IDD HT+A+AST++ + +
Sbjct: 4 SRKESVQRRHRRIRKKVNGTPNCPRLAVFRSNLHIYAQIIDDVGQHTIAAASTVEPDLKK 63
Query: 113 ELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L SSG T E S VG+++A+ L +GI +V FDRGG YHGR++ALADAARE GLQF
Sbjct: 64 SL--SSGSTCEASAAVGKLVAERALAQGIEQVVFDRGGNLYHGRVKALADAAREAGLQF 120
>sp|A9KJH8|RL18_CLOPH 50S ribosomal protein L18 OS=Clostridium phytofermentans (strain
ATCC 700394 / DSM 18823 / ISDg) GN=rplR PE=3 SV=1
Length = 122
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 84/119 (70%), Gaps = 2/119 (1%)
Query: 53 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISE 112
K E R +H+RIR + GTP RPRL VFRSN H+Y Q+IDDT +TL SAST++K +
Sbjct: 6 NKSEVRIKKHNRIRNRFSGTPTRPRLAVFRSNNHMYAQIIDDTVGNTLVSASTLEKGVKA 65
Query: 113 ELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
EL+ ++ + + +G +IAK LEKGIT V FDRGG+ Y G++QALA+AARE GL F
Sbjct: 66 ELEKTN--DVAAAAMLGTVIAKKALEKGITTVVFDRGGFIYQGKVQALAEAAREAGLNF 122
>sp|Q1ISA6|RL18_KORVE 50S ribosomal protein L18 OS=Koribacter versatilis (strain
Ellin345) GN=rplR PE=3 SV=1
Length = 124
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 85/110 (77%)
Query: 62 HSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEELDYSSGPT 121
HSRIRKK++GTPERPRL V+RS HLYVQVIDD+K TL +A+T++ ++E +G
Sbjct: 15 HSRIRKKMEGTPERPRLNVYRSTNHLYVQVIDDSKGATLVAANTLEFGEAKEGKRPTGGN 74
Query: 122 IEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
+ +K++G+ IA+ +KGI KV FDRGGY YHGRI+ALADAARE GL+F
Sbjct: 75 LSAAKQLGKAIAERAKQKGINKVVFDRGGYLYHGRIKALADAAREGGLEF 124
>sp|B9LJE8|RL18_CHLSY 50S ribosomal protein L18 OS=Chloroflexus aurantiacus (strain ATCC
29364 / DSM 637 / Y-400-fl) GN=rplR PE=3 SV=1
Length = 120
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 89/123 (72%), Gaps = 9/123 (7%)
Query: 52 RTKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPIS 111
RT RE R RH+RIRK++ GTPERPRL VFRS+ H+Y QVIDDT HTL +AST +K
Sbjct: 4 RTPRELRLRRHNRIRKRVFGTPERPRLNVFRSHVHIYAQVIDDTVGHTLVAASTNEK--- 60
Query: 112 EELDYSSGPTIEVSKK---VGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYG 168
+S P + +++ VG++IA+ L+ GITKV FDRGGY YHGR++ALA+AARE G
Sbjct: 61 ---GWSGSPELTKTQEAALVGKLIAERALQAGITKVVFDRGGYKYHGRVKALAEAAREAG 117
Query: 169 LQF 171
L F
Sbjct: 118 LNF 120
>sp|A9WH82|RL18_CHLAA 50S ribosomal protein L18 OS=Chloroflexus aurantiacus (strain ATCC
29366 / DSM 635 / J-10-fl) GN=rplR PE=3 SV=1
Length = 120
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 89/123 (72%), Gaps = 9/123 (7%)
Query: 52 RTKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPIS 111
RT RE R RH+RIRK++ GTPERPRL VFRS+ H+Y QVIDDT HTL +AST +K
Sbjct: 4 RTPRELRLRRHNRIRKRVFGTPERPRLNVFRSHVHIYAQVIDDTVGHTLVAASTNEK--- 60
Query: 112 EELDYSSGPTIEVSKK---VGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYG 168
+S P + +++ VG++IA+ L+ GITKV FDRGGY YHGR++ALA+AARE G
Sbjct: 61 ---GWSGSPELTKTQEAALVGKLIAERALQAGITKVVFDRGGYKYHGRVKALAEAAREAG 117
Query: 169 LQF 171
L F
Sbjct: 118 LNF 120
>sp|B7IT35|RL18_BACC2 50S ribosomal protein L18 OS=Bacillus cereus (strain G9842) GN=rplR
PE=3 SV=1
Length = 120
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 82/118 (69%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----D 62
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L + E + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 63 LALNGTSNTEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
>sp|B9E9K7|RL18_MACCJ 50S ribosomal protein L18 OS=Macrococcus caseolyticus (strain
JCSC5402) GN=rplR PE=3 SV=1
Length = 120
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K + R RH+R+R K+ GT ERPRL V+RSNKH+Y QVIDD K TLA AST K + E
Sbjct: 7 KNKVRMKRHARVRSKLAGTTERPRLNVYRSNKHIYAQVIDDVKGVTLAQASTQDKNLGLE 66
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
+ +E + KVGE +AK +EKG+ V FDRGGY +HGR++ALADAARE GL+F
Sbjct: 67 ----TTSNVEAAAKVGEAVAKLAVEKGVKAVVFDRGGYLFHGRVKALADAARENGLEF 120
>sp|B7JKD5|RL18_BACC0 50S ribosomal protein L18 OS=Bacillus cereus (strain AH820) GN=rplR
PE=3 SV=1
Length = 120
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 82/118 (69%), Gaps = 4/118 (3%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +
Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----D 62
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L + IE + KVGE +AK +E G+ +V FDRGGY YHGR++ALA+AARE GLQF
Sbjct: 63 LALNGTSNIEAATKVGESVAKRAVEXGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
>sp|C5CGI6|RL18_KOSOT 50S ribosomal protein L18 OS=Kosmotoga olearia (strain TBF 19.5.1)
GN=rplR PE=3 SV=1
Length = 122
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 52 RTKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPIS 111
R ++E R RH R+R KI GTPERPRL V+RS +H+Y Q+IDD T+ SAST+ K +
Sbjct: 5 RDRKELRRKRHLRVRSKIKGTPERPRLAVYRSERHIYAQIIDDIAGRTIVSASTVDKELR 64
Query: 112 EELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
E+L + E +K+VG++IAK EKGI K+ FDRGG+ +HGRI++LADAARE GL+F
Sbjct: 65 EKLTKTWNQ--EAAKEVGKLIAKRAAEKGIKKIVFDRGGFKFHGRIKSLADAAREAGLEF 122
>sp|B1XJJ2|RL18_SYNP2 50S ribosomal protein L18 OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=rplR PE=3 SV=1
Length = 120
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 77/103 (74%), Gaps = 2/103 (1%)
Query: 69 IDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEELDYSSGPTIEVSKKV 128
++GT +RPRL VFRS+KH+Y QVIDD K HTL +AST+ K + EL +SG I S V
Sbjct: 20 VEGTGDRPRLAVFRSHKHIYAQVIDDEKQHTLVAASTLDKDLKGEL--ASGGNISASTAV 77
Query: 129 GEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
G +IAK LEKGITKV FDRGG YHGR++ALADAARE GL F
Sbjct: 78 GNLIAKRALEKGITKVVFDRGGNLYHGRVKALADAAREAGLDF 120
>sp|C6E4P1|RL18_GEOSM 50S ribosomal protein L18 OS=Geobacter sp. (strain M21) GN=rplR
PE=3 SV=1
Length = 122
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 83/118 (70%), Gaps = 2/118 (1%)
Query: 54 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISEE 113
K+ R R +R+RKKI G+P RPRL VF+S +H+Y Q+IDDT TLASAST+ ++E
Sbjct: 7 KQVARLKRQTRVRKKITGSPARPRLNVFKSARHIYAQLIDDTTGATLASASTLLGDVAEG 66
Query: 114 LDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 171
L Y+ IE + KVG IAK LEK IT V FDR G+ YHGRI+ALADAARE GL F
Sbjct: 67 LSYTG--NIEAATKVGAAIAKKALEKEITAVVFDRNGFLYHGRIKALADAARENGLSF 122
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,326,878
Number of Sequences: 539616
Number of extensions: 2166990
Number of successful extensions: 7612
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 6078
Number of HSP's gapped (non-prelim): 810
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)