Query 030808
Match_columns 171
No_of_seqs 125 out of 185
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 07:20:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030808.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030808hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2drp_A Protein (tramtrack DNA- 97.5 0.0001 3.5E-09 46.6 4.2 54 45-98 9-65 (66)
2 2ct1_A Transcriptional repress 97.5 0.00012 4.2E-09 47.9 4.5 55 46-100 15-72 (77)
3 3uk3_C Zinc finger protein 217 97.1 0.0009 3.1E-08 40.8 4.7 51 46-98 4-57 (57)
4 2yt9_A Zinc finger-containing 96.9 0.0013 4.5E-08 43.8 4.9 52 46-97 35-89 (95)
5 1x6h_A Transcriptional repress 96.7 0.0019 6.6E-08 42.1 4.3 54 46-99 15-73 (86)
6 1x5w_A Zinc finger protein 64, 96.7 0.0017 5.9E-08 41.5 3.8 52 45-98 8-62 (70)
7 2eod_A TNF receptor-associated 96.7 0.0013 4.4E-08 42.0 3.2 48 45-95 9-59 (66)
8 1bbo_A Human enhancer-binding 96.5 0.0042 1.4E-07 37.7 4.8 50 47-98 2-54 (57)
9 2adr_A ADR1; transcription reg 96.4 0.005 1.7E-07 37.9 4.7 51 46-98 2-55 (60)
10 2gqj_A Zinc finger protein KIA 96.3 0.0011 3.8E-08 45.7 1.3 54 45-99 23-80 (98)
11 2ctd_A Zinc finger protein 512 96.3 0.0047 1.6E-07 43.2 4.5 50 46-98 34-87 (96)
12 2rpc_A Zinc finger protein ZIC 96.3 0.0067 2.3E-07 43.9 5.4 57 42-98 21-87 (155)
13 1x6e_A Zinc finger protein 24; 96.3 0.0043 1.5E-07 39.9 3.8 51 45-97 13-66 (72)
14 2d9h_A Zinc finger protein 692 96.1 0.0049 1.7E-07 40.0 3.6 56 45-100 6-65 (78)
15 2csh_A Zinc finger protein 297 96.1 0.0049 1.7E-07 42.3 3.7 54 46-101 37-93 (110)
16 2kmk_A Zinc finger protein GFI 96.1 0.0064 2.2E-07 39.0 3.9 50 46-97 29-81 (82)
17 2dlq_A GLI-kruppel family memb 96.0 0.0084 2.9E-07 41.3 4.7 20 47-66 8-28 (124)
18 2ej4_A Zinc finger protein ZIC 96.0 0.015 5.2E-07 38.6 5.8 54 44-97 23-86 (95)
19 1a1h_A QGSR zinc finger peptid 96.0 0.0097 3.3E-07 39.0 4.6 50 46-97 34-86 (90)
20 2cot_A Zinc finger protein 435 96.0 0.011 3.7E-07 38.4 4.8 52 45-98 17-71 (77)
21 2dmd_A Zinc finger protein 64, 96.0 0.0081 2.8E-07 39.9 4.3 47 47-95 9-58 (96)
22 2lce_A B-cell lymphoma 6 prote 96.0 0.014 4.9E-07 37.5 5.3 53 44-98 15-70 (74)
23 2d9k_A FLN29 gene product; zin 95.9 0.0027 9.1E-08 42.8 1.6 48 45-95 16-64 (75)
24 2wbt_A B-129; zinc finger; 2.7 95.8 0.01 3.5E-07 41.9 4.4 50 46-99 74-126 (129)
25 2dlq_A GLI-kruppel family memb 95.8 0.0097 3.3E-07 41.0 4.1 53 46-98 35-91 (124)
26 2kmk_A Zinc finger protein GFI 95.8 0.01 3.5E-07 38.0 3.9 50 47-98 2-54 (82)
27 1llm_C Chimera of ZIF23-GCN4; 95.6 0.012 4E-07 39.1 3.8 56 46-103 3-61 (88)
28 2ee8_A Protein ODD-skipped-rel 95.6 0.019 6.6E-07 38.9 4.9 53 44-98 15-70 (106)
29 2dmd_A Zinc finger protein 64, 95.5 0.016 5.6E-07 38.4 4.4 52 45-98 35-89 (96)
30 2ee8_A Protein ODD-skipped-rel 95.5 0.032 1.1E-06 37.7 5.8 52 45-98 44-98 (106)
31 2lv2_A Insulinoma-associated p 95.3 0.019 6.5E-07 40.1 4.3 52 45-98 27-81 (85)
32 2epx_A Zinc finger protein 28 95.3 0.017 5.7E-07 33.7 3.2 35 46-81 12-47 (47)
33 1wjp_A Zinc finger protein 295 95.1 0.022 7.4E-07 39.0 3.9 45 46-94 16-63 (107)
34 2yt9_A Zinc finger-containing 95.1 0.018 6.2E-07 38.1 3.4 52 45-98 6-60 (95)
35 2ytn_A Zinc finger protein 347 95.0 0.026 8.9E-07 32.9 3.7 34 46-81 12-46 (46)
36 1llm_C Chimera of ZIF23-GCN4; 95.0 0.0034 1.2E-07 41.8 -0.4 51 46-99 31-84 (88)
37 2em0_A Zinc finger protein 224 95.0 0.028 9.4E-07 32.8 3.7 34 46-81 12-46 (46)
38 2eq0_A Zinc finger protein 347 94.9 0.021 7.1E-07 33.4 2.9 35 45-81 11-46 (46)
39 2ema_A Zinc finger protein 347 94.8 0.023 7.9E-07 33.2 3.1 34 46-81 12-46 (46)
40 2eov_A Zinc finger protein 484 94.8 0.032 1.1E-06 32.4 3.7 34 46-81 12-46 (46)
41 2eop_A Zinc finger protein 268 94.8 0.029 9.8E-07 32.7 3.4 34 46-81 12-46 (46)
42 2emy_A Zinc finger protein 268 94.7 0.027 9.1E-07 32.9 3.0 34 46-81 12-46 (46)
43 2emk_A Zinc finger protein 28 94.6 0.039 1.3E-06 32.3 3.7 34 46-81 12-46 (46)
44 4gzn_C ZFP-57, zinc finger pro 94.6 0.039 1.3E-06 36.1 4.0 48 46-95 4-54 (60)
45 2ytm_A Zinc finger protein 28 94.6 0.034 1.2E-06 32.6 3.4 34 46-81 12-46 (46)
46 2ytk_A Zinc finger protein 347 94.5 0.03 1E-06 32.7 3.0 34 46-81 12-46 (46)
47 2emh_A Zinc finger protein 484 94.5 0.03 1E-06 32.7 2.9 34 46-81 12-46 (46)
48 2eps_A POZ-, at HOOK-, and zin 94.4 0.031 1.1E-06 34.2 3.0 39 45-84 11-50 (54)
49 1ubd_C Protein (YY1 zinc finge 94.4 0.054 1.8E-06 37.5 4.6 51 45-98 4-59 (124)
50 2ene_A Zinc finger protein 347 94.4 0.03 1E-06 32.7 2.8 34 46-81 12-46 (46)
51 2eq4_A Zinc finger protein 224 94.3 0.044 1.5E-06 31.8 3.4 34 46-81 12-46 (46)
52 2dlk_A Novel protein; ZF-C2H2 94.3 0.053 1.8E-06 34.7 4.1 51 46-97 7-64 (79)
53 2eoq_A Zinc finger protein 224 94.3 0.047 1.6E-06 31.8 3.6 34 46-81 12-46 (46)
54 2ep2_A Zinc finger protein 484 94.3 0.035 1.2E-06 32.3 3.0 35 45-81 11-46 (46)
55 2ytq_A Zinc finger protein 268 94.3 0.043 1.5E-06 32.1 3.4 34 46-81 12-46 (46)
56 2ytj_A Zinc finger protein 484 94.3 0.038 1.3E-06 32.2 3.1 34 46-81 12-46 (46)
57 1wjp_A Zinc finger protein 295 94.3 0.036 1.2E-06 37.9 3.4 50 46-98 42-94 (107)
58 2em5_A ZFP-95, zinc finger pro 94.2 0.036 1.2E-06 32.4 2.8 34 46-81 12-46 (46)
59 2eoo_A ZFP-95, zinc finger pro 94.2 0.037 1.3E-06 32.3 2.9 34 46-81 12-46 (46)
60 2enc_A Zinc finger protein 224 94.1 0.039 1.3E-06 32.2 2.9 34 46-81 12-46 (46)
61 2en6_A Zinc finger protein 268 94.1 0.031 1E-06 32.6 2.4 35 45-81 11-46 (46)
62 2eoe_A Zinc finger protein 347 94.1 0.04 1.4E-06 32.0 2.9 34 46-81 12-46 (46)
63 2ely_A Zinc finger protein 224 94.1 0.038 1.3E-06 32.3 2.8 34 46-81 12-46 (46)
64 2el4_A Zinc finger protein 268 94.1 0.044 1.5E-06 31.8 3.0 34 46-81 12-46 (46)
65 2epz_A Zinc finger protein 28 94.0 0.056 1.9E-06 31.5 3.4 34 46-81 12-46 (46)
66 2lt7_A Transcriptional regulat 93.9 0.047 1.6E-06 40.3 3.7 49 45-95 21-72 (133)
67 2gli_A Protein (five-finger GL 93.9 0.086 2.9E-06 37.7 5.0 36 46-81 3-40 (155)
68 2ytt_A Zinc finger protein 473 93.9 0.041 1.4E-06 32.2 2.7 34 46-81 12-46 (46)
69 2em9_A Zinc finger protein 224 93.9 0.053 1.8E-06 31.5 3.1 34 46-81 12-46 (46)
70 2ebt_A Krueppel-like factor 5; 93.9 0.083 2.8E-06 35.0 4.5 55 42-98 11-72 (100)
71 2eme_A Zinc finger protein 473 93.9 0.054 1.8E-06 31.4 3.2 34 46-81 12-46 (46)
72 1f2i_G Fusion of N-terminal 17 93.9 0.065 2.2E-06 34.0 3.8 49 45-95 18-71 (73)
73 1a1h_A QGSR zinc finger peptid 93.9 0.068 2.3E-06 34.8 4.0 51 46-98 4-59 (90)
74 2ytr_A Zinc finger protein 347 93.8 0.067 2.3E-06 31.0 3.5 34 46-81 12-46 (46)
75 2gli_A Protein (five-finger GL 93.8 0.026 9.1E-07 40.4 2.1 51 46-98 67-124 (155)
76 2epw_A Zinc finger protein 268 93.8 0.035 1.2E-06 32.3 2.3 34 46-81 12-46 (46)
77 2elz_A Zinc finger protein 224 93.8 0.07 2.4E-06 31.1 3.6 34 46-81 12-46 (46)
78 2ytd_A Zinc finger protein 473 93.7 0.055 1.9E-06 31.5 3.1 34 46-81 12-46 (46)
79 2i13_A AART; DNA binding, zinc 93.7 0.066 2.3E-06 40.0 4.2 51 46-98 105-158 (190)
80 2j7j_A Transcription factor II 93.6 0.076 2.6E-06 33.9 3.8 50 47-98 2-58 (85)
81 2em7_A Zinc finger protein 224 93.6 0.067 2.3E-06 31.1 3.2 34 46-81 12-46 (46)
82 2emm_A ZFP-95, zinc finger pro 93.5 0.063 2.2E-06 31.1 3.1 34 46-81 12-46 (46)
83 2emf_A Zinc finger protein 484 93.4 0.069 2.4E-06 31.1 3.1 34 46-81 12-46 (46)
84 2emx_A Zinc finger protein 268 93.4 0.064 2.2E-06 30.9 3.0 34 46-81 10-44 (44)
85 2ghf_A ZHX1, zinc fingers and 93.4 0.07 2.4E-06 38.4 3.7 52 46-97 18-74 (102)
86 2eml_A Zinc finger protein 28 93.3 0.077 2.6E-06 30.8 3.2 34 46-81 12-46 (46)
87 2en1_A Zinc finger protein 224 93.3 0.053 1.8E-06 31.6 2.4 34 46-81 12-46 (46)
88 2ysp_A Zinc finger protein 224 93.3 0.048 1.6E-06 31.8 2.2 34 46-81 12-46 (46)
89 2epq_A POZ-, at HOOK-, and zin 93.2 0.067 2.3E-06 31.1 2.8 35 46-82 10-45 (45)
90 2yu8_A Zinc finger protein 347 93.2 0.047 1.6E-06 31.8 2.1 34 46-81 12-46 (46)
91 2emp_A Zinc finger protein 347 93.2 0.085 2.9E-06 30.6 3.2 34 46-81 12-46 (46)
92 1tf6_A Protein (transcription 93.0 0.1 3.4E-06 39.0 4.2 52 46-97 72-130 (190)
93 2en8_A Zinc finger protein 224 93.0 0.078 2.7E-06 30.7 2.9 34 46-81 12-46 (46)
94 2j7j_A Transcription factor II 93.0 0.11 3.7E-06 33.2 3.8 47 46-97 31-85 (85)
95 2el6_A Zinc finger protein 268 92.9 0.09 3.1E-06 30.6 3.1 34 46-81 12-46 (46)
96 2em2_A Zinc finger protein 28 92.9 0.09 3.1E-06 30.6 3.1 34 46-81 12-46 (46)
97 2ep0_A Zinc finger protein 28 92.9 0.079 2.7E-06 30.8 2.8 34 46-81 12-46 (46)
98 2ep3_A Zinc finger protein 484 92.9 0.076 2.6E-06 30.9 2.7 34 46-81 12-46 (46)
99 2wbs_A Krueppel-like factor 4; 92.8 0.15 5E-06 33.1 4.2 35 47-83 36-73 (89)
100 2i13_A AART; DNA binding, zinc 92.8 0.1 3.6E-06 38.9 4.0 50 46-97 49-101 (190)
101 2yso_A ZFP-95, zinc finger pro 92.7 0.12 3.9E-06 30.0 3.3 34 46-81 12-46 (46)
102 2em8_A Zinc finger protein 224 92.7 0.072 2.5E-06 31.1 2.4 34 46-81 12-46 (46)
103 2ytg_A ZFP-95, zinc finger pro 92.6 0.065 2.2E-06 31.2 2.2 34 46-81 12-46 (46)
104 2dmi_A Teashirt homolog 3; zin 92.4 0.04 1.4E-06 37.9 1.2 52 46-97 19-76 (115)
105 2ysl_A Tripartite motif-contai 92.2 0.063 2.2E-06 35.0 1.9 48 40-87 14-69 (73)
106 2csh_A Zinc finger protein 297 92.0 0.16 5.6E-06 34.5 3.9 50 46-98 10-62 (110)
107 2dmi_A Teashirt homolog 3; zin 91.9 0.066 2.3E-06 36.8 1.8 54 44-99 48-106 (115)
108 1ubd_C Protein (YY1 zinc finge 91.8 0.16 5.6E-06 34.9 3.8 51 46-98 34-89 (124)
109 2epr_A POZ-, at HOOK-, and zin 91.5 0.13 4.5E-06 30.4 2.6 37 44-82 10-47 (48)
110 2ebt_A Krueppel-like factor 5; 91.5 0.37 1.3E-05 31.7 5.2 50 45-96 44-98 (100)
111 2jr7_A DPH3 homolog; DESR1, CS 91.0 0.071 2.4E-06 39.0 1.2 46 31-85 7-55 (89)
112 2rpc_A Zinc finger protein ZIC 90.9 0.3 1E-05 35.0 4.6 51 46-98 62-117 (155)
113 1wge_A Hypothetical protein 26 90.9 0.097 3.3E-06 37.8 1.9 46 31-85 14-62 (83)
114 2lt7_A Transcriptional regulat 90.7 0.2 6.8E-06 36.9 3.5 52 46-99 50-104 (133)
115 3mjh_B Early endosome antigen 90.3 0.2 7E-06 30.7 2.7 28 46-73 5-33 (34)
116 2wbs_A Krueppel-like factor 4; 90.3 0.32 1.1E-05 31.4 3.9 52 44-97 3-61 (89)
117 2epa_A Krueppel-like factor 10 90.3 0.75 2.6E-05 28.9 5.6 50 43-94 14-70 (72)
118 2ep1_A Zinc finger protein 484 90.2 0.34 1.2E-05 27.8 3.6 33 46-80 12-45 (46)
119 2jp9_A Wilms tumor 1; DNA bind 90.1 0.34 1.2E-05 32.8 4.0 50 46-97 6-62 (119)
120 2em3_A Zinc finger protein 28 89.9 0.27 9.2E-06 28.4 3.0 33 46-80 12-45 (46)
121 1vd4_A Transcription initiatio 89.9 0.12 4E-06 32.7 1.4 35 46-84 14-48 (62)
122 2jp9_A Wilms tumor 1; DNA bind 89.8 0.44 1.5E-05 32.3 4.4 51 46-98 36-91 (119)
123 1yop_A KTI11P; zinc finger, me 89.6 0.078 2.7E-06 38.3 0.4 46 31-85 7-55 (83)
124 2eq2_A Zinc finger protein 347 89.1 0.48 1.6E-05 27.3 3.6 33 46-80 12-45 (46)
125 2ecj_A Tripartite motif-contai 88.9 0.22 7.5E-06 30.8 2.1 41 41-81 10-58 (58)
126 2ysj_A Tripartite motif-contai 88.8 0.14 4.7E-06 32.7 1.2 19 39-57 13-31 (63)
127 1paa_A Yeast transcription fac 88.5 0.27 9.1E-06 25.3 2.0 27 46-72 2-29 (30)
128 2lv2_A Insulinoma-associated p 88.4 0.26 8.8E-06 34.2 2.4 29 46-74 56-85 (85)
129 2emi_A Zinc finger protein 484 88.4 0.43 1.5E-05 27.5 3.0 33 46-80 12-45 (46)
130 2emg_A Zinc finger protein 484 88.4 0.49 1.7E-05 27.2 3.3 33 46-80 12-45 (46)
131 2eow_A Zinc finger protein 347 88.3 0.43 1.5E-05 27.4 3.0 33 46-80 12-45 (46)
132 2kr4_A Ubiquitin conjugation f 88.2 0.48 1.7E-05 32.7 3.7 37 42-85 10-58 (85)
133 1wgm_A Ubiquitin conjugation f 88.0 0.66 2.3E-05 33.1 4.5 38 41-85 17-67 (98)
134 2yti_A Zinc finger protein 347 88.0 0.5 1.7E-05 27.2 3.2 33 46-80 12-45 (46)
135 2enf_A Zinc finger protein 347 87.9 0.53 1.8E-05 27.1 3.3 33 46-80 12-45 (46)
136 2yth_A Zinc finger protein 224 87.9 0.61 2.1E-05 26.9 3.6 33 46-80 12-45 (46)
137 2emj_A Zinc finger protein 28 87.9 0.42 1.4E-05 27.6 2.8 33 46-80 12-45 (46)
138 1tf6_A Protein (transcription 87.8 0.51 1.7E-05 35.1 3.9 52 45-98 103-161 (190)
139 2eon_A ZFP-95, zinc finger pro 87.8 0.51 1.8E-05 27.3 3.2 33 46-80 12-45 (46)
140 2en9_A Zinc finger protein 28 87.8 0.64 2.2E-05 26.8 3.6 34 45-80 11-45 (46)
141 2eor_A Zinc finger protein 224 87.7 0.46 1.6E-05 27.2 2.9 33 46-80 12-45 (46)
142 2csy_A Zinc finger protein 183 87.5 0.11 3.6E-06 34.9 -0.1 46 39-86 8-60 (81)
143 3ztg_A E3 ubiquitin-protein li 87.1 0.083 2.9E-06 36.1 -0.8 46 40-85 7-60 (92)
144 1t1h_A Gspef-atpub14, armadill 87.1 0.19 6.7E-06 33.2 1.1 46 40-86 2-54 (78)
145 2eq1_A Zinc finger protein 347 87.0 0.63 2.2E-05 26.7 3.2 33 46-80 12-45 (46)
146 2dlk_A Novel protein; ZF-C2H2 86.5 0.54 1.8E-05 29.8 2.9 36 46-83 38-76 (79)
147 2ecw_A Tripartite motif-contai 86.5 1.5 5E-05 28.6 5.2 46 42-87 15-71 (85)
148 2ytp_A Zinc finger protein 484 86.4 0.53 1.8E-05 27.2 2.7 33 46-80 12-45 (46)
149 2yts_A Zinc finger protein 484 86.0 0.67 2.3E-05 26.5 3.0 33 46-80 12-45 (46)
150 1klr_A Zinc finger Y-chromosom 85.6 0.66 2.2E-05 23.4 2.5 24 46-69 2-26 (30)
151 1ard_A Yeast transcription fac 85.5 0.9 3.1E-05 22.9 3.1 24 46-70 2-26 (29)
152 2el5_A Zinc finger protein 268 85.4 0.75 2.6E-05 25.8 2.9 32 46-79 10-42 (42)
153 2kre_A Ubiquitin conjugation f 85.3 0.91 3.1E-05 32.4 4.0 37 42-85 25-73 (100)
154 2adr_A ADR1; transcription reg 85.1 0.55 1.9E-05 28.4 2.4 28 46-73 30-58 (60)
155 2eoz_A Zinc finger protein 473 84.9 0.56 1.9E-05 27.1 2.3 33 46-80 12-45 (46)
156 2eom_A ZFP-95, zinc finger pro 84.9 1.1 3.6E-05 25.9 3.5 33 46-80 12-45 (46)
157 2yrm_A B-cell lymphoma 6 prote 84.7 1.1 3.6E-05 25.6 3.4 33 46-80 10-43 (43)
158 1wir_A Protein arginine N-meth 84.7 0.72 2.5E-05 35.1 3.3 32 44-75 13-45 (121)
159 1e4u_A Transcriptional repress 84.5 0.44 1.5E-05 32.8 1.9 44 43-87 8-62 (78)
160 2em6_A Zinc finger protein 224 84.4 1 3.5E-05 25.9 3.3 33 46-80 12-45 (46)
161 2ytf_A Zinc finger protein 268 84.3 0.84 2.9E-05 26.1 2.8 33 46-80 12-45 (46)
162 2egp_A Tripartite motif-contai 84.3 0.26 8.8E-06 32.4 0.6 46 42-87 8-65 (79)
163 1zw8_A Zinc-responsive transcr 84.2 1.9 6.4E-05 28.4 4.9 46 52-97 9-64 (64)
164 2ct1_A Transcriptional repress 84.2 0.6 2.1E-05 29.8 2.4 29 45-73 44-73 (77)
165 2em4_A Zinc finger protein 28 84.1 0.88 3E-05 26.2 2.9 33 46-80 12-45 (46)
166 2ecv_A Tripartite motif-contai 83.9 0.26 9E-06 32.4 0.5 47 41-87 14-71 (85)
167 2f42_A STIP1 homology and U-bo 83.9 0.88 3E-05 36.4 3.7 40 40-85 100-151 (179)
168 2eof_A Zinc finger protein 268 83.7 0.99 3.4E-05 25.4 2.9 32 46-79 12-44 (44)
169 2eoy_A Zinc finger protein 473 83.1 0.67 2.3E-05 26.7 2.1 34 46-80 12-46 (46)
170 2yrj_A Zinc finger protein 473 82.8 0.99 3.4E-05 25.8 2.7 33 46-80 12-45 (46)
171 2eoh_A Zinc finger protein 28 82.4 1.4 4.8E-05 25.3 3.3 32 46-79 12-44 (46)
172 2en7_A Zinc finger protein 268 81.7 1.5 5.2E-05 24.6 3.2 32 46-79 12-44 (44)
173 2yte_A Zinc finger protein 473 81.6 1.8 6.2E-05 24.0 3.5 31 46-78 10-41 (42)
174 2emz_A ZFP-95, zinc finger pro 81.5 1.6 5.5E-05 25.0 3.3 33 46-80 12-45 (46)
175 2elp_A Zinc finger protein 406 81.0 0.49 1.7E-05 25.9 0.8 22 46-67 9-32 (37)
176 2yto_A Zinc finger protein 484 80.9 1.3 4.5E-05 25.4 2.8 32 46-79 12-44 (46)
177 1x6h_A Transcriptional repress 80.8 1.2 4.2E-05 28.3 2.9 37 45-83 46-83 (86)
178 2ent_A Krueppel-like factor 15 80.7 1.5 5.1E-05 25.1 3.0 34 46-81 12-48 (48)
179 3hcs_A TNF receptor-associated 80.6 0.73 2.5E-05 34.9 1.9 47 46-95 82-131 (170)
180 2yur_A Retinoblastoma-binding 80.5 0.32 1.1E-05 32.2 -0.1 45 40-84 9-61 (74)
181 2epu_A Zinc finger protein 32; 80.5 0.96 3.3E-05 25.9 2.1 33 46-80 12-45 (45)
182 2m0f_A Zinc finger and BTB dom 80.5 1 3.6E-05 22.5 2.0 22 46-67 2-24 (29)
183 3iuf_A Zinc finger protein UBI 79.9 1 3.5E-05 26.7 2.1 30 46-75 7-37 (48)
184 3uk3_C Zinc finger protein 217 79.9 0.98 3.4E-05 26.8 2.0 24 46-69 32-56 (57)
185 2enh_A Zinc finger protein 28 79.8 1.5 5.1E-05 25.1 2.8 32 46-79 12-44 (46)
186 2ct2_A Tripartite motif protei 79.8 2.3 8E-05 28.0 4.1 46 42-87 11-68 (88)
187 2d9h_A Zinc finger protein 692 79.7 1.3 4.5E-05 28.1 2.7 30 45-74 37-67 (78)
188 2ct5_A Zinc finger BED domain 79.6 0.84 2.9E-05 31.9 1.8 30 74-103 28-62 (73)
189 1wii_A Hypothetical UPF0222 pr 79.3 0.74 2.5E-05 33.2 1.5 38 42-84 19-56 (85)
190 2drp_A Protein (tramtrack DNA- 79.2 1.2 4.1E-05 27.3 2.3 26 45-70 39-65 (66)
191 2ea6_A Ring finger protein 4; 79.2 0.46 1.6E-05 30.1 0.4 42 42-85 11-66 (69)
192 2m0e_A Zinc finger and BTB dom 78.7 1.3 4.3E-05 22.1 2.0 22 46-67 2-24 (29)
193 2c2l_A CHIP, carboxy terminus 78.3 1.9 6.4E-05 34.0 3.8 39 42-86 204-254 (281)
194 1rik_A E6APC1 peptide; E6-bind 78.3 1.1 3.8E-05 22.6 1.7 22 46-67 2-24 (29)
195 2djb_A Polycomb group ring fin 78.3 0.47 1.6E-05 31.0 0.2 45 41-87 10-62 (72)
196 2els_A Zinc finger protein 406 78.0 1.3 4.5E-05 23.9 2.0 25 45-70 8-33 (36)
197 2ep4_A Ring finger protein 24; 78.0 0.71 2.4E-05 30.0 1.0 42 42-85 11-62 (74)
198 2elm_A Zinc finger protein 406 77.8 1.4 4.7E-05 24.3 2.1 25 46-70 9-34 (37)
199 2ect_A Ring finger protein 126 77.6 0.5 1.7E-05 31.1 0.2 44 41-86 10-63 (78)
200 2elu_A Zinc finger protein 406 77.4 1.2 4.1E-05 27.6 1.8 25 47-71 10-35 (37)
201 1twf_L ABC10-alpha, DNA-direct 77.2 0.76 2.6E-05 31.9 1.0 32 42-85 24-55 (70)
202 2d8t_A Dactylidin, ring finger 77.2 1.2 4.3E-05 28.9 2.0 45 44-90 13-64 (71)
203 1x5w_A Zinc finger protein 64, 77.0 1.8 6.3E-05 26.9 2.8 27 46-72 37-64 (70)
204 1znf_A 31ST zinc finger from X 76.9 2.1 7.2E-05 21.2 2.5 21 47-67 2-23 (27)
205 2kvh_A Zinc finger and BTB dom 76.9 1.4 4.9E-05 22.1 1.9 21 46-66 3-24 (27)
206 1p7a_A BF3, BKLF, kruppel-like 76.8 2.3 7.7E-05 22.9 2.8 22 46-67 11-33 (37)
207 2ecy_A TNF receptor-associated 76.6 0.4 1.4E-05 30.8 -0.5 45 42-87 11-62 (66)
208 2m0d_A Zinc finger and BTB dom 76.4 1.7 5.7E-05 21.8 2.1 22 46-67 3-25 (30)
209 2kiz_A E3 ubiquitin-protein li 76.1 3.9 0.00013 26.0 4.2 44 42-87 10-63 (69)
210 2eq3_A Zinc finger protein 347 75.9 2 6.8E-05 24.4 2.5 32 46-79 12-44 (46)
211 2eou_A Zinc finger protein 473 75.6 3.6 0.00012 23.2 3.6 32 46-79 12-44 (44)
212 1wim_A KIAA0161 protein; ring 75.5 0.58 2E-05 32.3 0.0 51 45-95 4-74 (94)
213 2emb_A Zinc finger protein 473 75.5 2.9 0.0001 23.5 3.2 32 46-79 12-44 (44)
214 2eoj_A Zinc finger protein 268 75.1 2 6.8E-05 24.2 2.3 32 46-79 12-44 (44)
215 1rim_A E6APC2 peptide; E6-bind 74.9 3.2 0.00011 22.3 3.1 26 46-72 2-28 (33)
216 2ctu_A Zinc finger protein 483 74.8 0.045 1.5E-06 34.2 -5.4 44 45-97 17-63 (73)
217 2elx_A Zinc finger protein 406 74.5 2.4 8E-05 22.4 2.4 22 46-67 7-29 (35)
218 2elo_A Zinc finger protein 406 74.4 2.2 7.4E-05 23.0 2.3 22 46-67 9-31 (37)
219 2elr_A Zinc finger protein 406 73.5 2.8 9.5E-05 22.3 2.6 25 45-70 8-33 (36)
220 2elt_A Zinc finger protein 406 72.9 2.3 7.8E-05 22.6 2.1 24 46-70 9-33 (36)
221 2elq_A Zinc finger protein 406 72.3 2.1 7.3E-05 22.9 1.9 23 45-67 8-31 (36)
222 1srk_A Zinc finger protein ZFP 71.8 3.3 0.00011 21.9 2.6 22 46-67 7-29 (35)
223 2yu5_A Zinc finger protein 473 71.5 2.5 8.6E-05 23.8 2.2 31 46-78 12-43 (44)
224 2k5c_A Uncharacterized protein 71.3 0.79 2.7E-05 33.8 -0.1 38 47-84 9-60 (95)
225 2kvf_A Zinc finger and BTB dom 70.9 2.4 8.2E-05 21.2 1.8 21 46-66 3-24 (28)
226 1x6e_A Zinc finger protein 24; 70.6 3.1 0.00011 26.0 2.7 27 46-73 42-69 (72)
227 2kvg_A Zinc finger and BTB dom 70.2 1.7 5.9E-05 22.1 1.1 21 46-66 3-24 (27)
228 2en3_A ZFP-95, zinc finger pro 70.0 2.5 8.6E-05 24.0 2.0 32 46-79 12-44 (46)
229 2ytb_A Zinc finger protein 32; 69.4 3 0.0001 23.1 2.1 25 46-71 11-36 (42)
230 2l6l_A DNAJ homolog subfamily 68.9 0.53 1.8E-05 35.7 -1.6 51 33-93 98-151 (155)
231 2yuc_A TNF receptor-associated 68.7 3.6 0.00012 27.1 2.8 46 46-93 16-63 (76)
232 1ffk_W Ribosomal protein L37AE 68.5 1.2 4.2E-05 31.3 0.4 17 41-57 22-39 (73)
233 2en2_A B-cell lymphoma 6 prote 68.3 3.4 0.00012 22.9 2.2 26 46-72 11-37 (42)
234 2lvr_A Zinc finger and BTB dom 71.0 1.1 3.7E-05 22.7 0.0 22 46-67 3-25 (30)
235 1bor_A Transcription factor PM 67.7 1.3 4.6E-05 27.8 0.4 43 44-86 4-48 (56)
236 2elv_A Zinc finger protein 406 67.7 2.8 9.7E-05 22.4 1.8 22 46-67 9-31 (36)
237 2lvu_A Zinc finger and BTB dom 70.2 1.2 4E-05 22.3 0.0 21 46-66 2-23 (26)
238 1e8j_A Rubredoxin; iron-sulfur 66.3 3.4 0.00012 26.9 2.2 14 41-54 31-44 (52)
239 3hct_A TNF receptor-associated 65.8 11 0.00039 26.6 5.2 47 40-87 12-65 (118)
240 1njq_A Superman protein; zinc- 65.3 3.8 0.00013 22.5 2.0 26 46-72 6-32 (39)
241 3pwf_A Rubrerythrin; non heme 65.1 2.4 8.1E-05 33.3 1.5 27 44-84 136-162 (170)
242 2ept_A Zinc finger protein 32; 64.5 3.8 0.00013 22.6 1.9 25 46-71 10-35 (41)
243 2l7x_A Envelope glycoprotein; 64.5 2.1 7.3E-05 30.5 1.0 22 45-66 29-50 (77)
244 2eos_A B-cell lymphoma 6 prote 64.2 4.4 0.00015 22.5 2.2 25 46-71 11-36 (42)
245 2lvt_A Zinc finger and BTB dom 67.7 1.4 4.9E-05 22.3 0.0 21 46-66 2-23 (29)
246 2xeu_A Ring finger protein 4; 63.8 0.96 3.3E-05 28.1 -0.9 40 46-87 3-56 (64)
247 3fl2_A E3 ubiquitin-protein li 63.7 1.1 3.9E-05 32.1 -0.6 42 44-86 50-98 (124)
248 3jyw_9 60S ribosomal protein L 63.3 0.89 3.1E-05 32.1 -1.2 15 42-56 22-37 (72)
249 2yu4_A E3 SUMO-protein ligase 63.2 7.5 0.00025 26.9 3.6 32 52-84 26-59 (94)
250 2gqj_A Zinc finger protein KIA 62.9 6.4 0.00022 26.4 3.2 26 46-71 54-80 (98)
251 3j21_i 50S ribosomal protein L 62.4 0.94 3.2E-05 32.7 -1.2 13 42-54 31-43 (83)
252 2epc_A Zinc finger protein 32; 62.3 4.4 0.00015 22.3 1.9 26 46-72 11-37 (42)
253 2epv_A Zinc finger protein 268 61.0 6.3 0.00022 22.2 2.5 25 46-71 12-37 (44)
254 2jvx_A NF-kappa-B essential mo 60.8 6.1 0.00021 23.1 2.3 22 46-67 3-25 (28)
255 2e72_A POGO transposable eleme 60.5 6.3 0.00021 26.0 2.6 22 45-66 11-33 (49)
256 3htk_C E3 SUMO-protein ligase 60.2 2.8 9.7E-05 35.9 1.2 37 44-85 179-230 (267)
257 1yui_A GAGA-factor; complex (D 60.1 7.2 0.00025 23.1 2.8 25 46-71 24-49 (54)
258 4gzn_C ZFP-57, zinc finger pro 60.0 6.2 0.00021 25.3 2.6 27 46-73 32-59 (60)
259 2lcq_A Putative toxin VAPC6; P 59.9 1.9 6.6E-05 32.8 0.1 29 44-85 130-158 (165)
260 3l11_A E3 ubiquitin-protein li 59.8 1.8 6E-05 30.6 -0.2 44 43-87 12-62 (115)
261 2y43_A E3 ubiquitin-protein li 58.1 0.63 2.2E-05 32.1 -2.7 41 44-86 20-68 (99)
262 6rxn_A Rubredoxin; electron tr 57.8 3.6 0.00012 26.4 1.1 12 43-54 27-38 (46)
263 2ecn_A Ring finger protein 141 57.6 1.9 6.5E-05 27.6 -0.3 43 42-86 11-59 (70)
264 2ctd_A Zinc finger protein 512 57.5 8.8 0.0003 26.2 3.2 26 46-71 62-88 (96)
265 3izc_m 60S ribosomal protein R 57.4 3.8 0.00013 30.1 1.3 15 42-56 32-47 (92)
266 3iz5_m 60S ribosomal protein L 57.2 3.7 0.00013 30.1 1.2 13 42-54 32-44 (92)
267 3ng2_A RNF4, snurf, ring finge 56.6 1 3.5E-05 28.8 -1.7 41 45-87 9-63 (71)
268 2ghf_A ZHX1, zinc fingers and 56.4 3.5 0.00012 29.3 0.9 38 46-84 50-88 (102)
269 2epp_A POZ-, at HOOK-, and zin 56.2 12 0.00042 24.7 3.6 35 46-83 13-48 (66)
270 1vq8_Z 50S ribosomal protein L 56.0 3.4 0.00012 29.4 0.8 30 43-85 24-55 (83)
271 1lko_A Rubrerythrin all-iron(I 55.4 1.9 6.6E-05 34.1 -0.6 27 45-84 154-180 (191)
272 2ej4_A Zinc finger protein ZIC 55.2 11 0.00038 24.3 3.2 31 47-79 63-94 (95)
273 1sp2_A SP1F2; zinc finger, tra 54.1 11 0.00036 19.3 2.5 22 46-67 2-26 (31)
274 2ckl_B Ubiquitin ligase protei 54.1 1.4 4.9E-05 33.1 -1.5 43 42-85 50-100 (165)
275 4ayb_P DNA-directed RNA polyme 54.1 8.4 0.00029 25.3 2.4 11 44-54 21-31 (48)
276 2ckl_A Polycomb group ring fin 53.8 1.4 4.6E-05 31.0 -1.6 41 44-86 13-61 (108)
277 4a17_Y RPL37A, 60S ribosomal p 53.7 4 0.00014 30.6 0.9 15 42-56 32-47 (103)
278 2i5o_A DNA polymerase ETA; zin 53.5 3.4 0.00011 25.8 0.4 22 45-66 8-29 (39)
279 2l0b_A E3 ubiquitin-protein li 53.4 0.94 3.2E-05 31.2 -2.5 41 44-86 38-88 (91)
280 1iym_A EL5; ring-H2 finger, ub 53.2 0.81 2.8E-05 28.0 -2.6 38 46-85 5-53 (55)
281 3vhs_A ATPase wrnip1; zinc fin 53.1 5.8 0.0002 23.3 1.3 19 75-93 6-25 (29)
282 2kfq_A FP1; protein, de novo p 52.1 3.8 0.00013 21.7 0.4 21 46-66 2-23 (32)
283 3h0g_L DNA-directed RNA polyme 51.3 6.9 0.00024 26.8 1.7 32 42-85 17-48 (63)
284 3lrq_A E3 ubiquitin-protein li 51.3 2.1 7.1E-05 29.9 -1.0 42 44-86 20-69 (100)
285 3sp4_A Aprataxin-like protein; 51.3 9.5 0.00033 31.2 2.9 26 44-69 167-194 (204)
286 1zfd_A SWI5; DNA binding motif 51.2 13 0.00045 18.9 2.6 24 46-70 3-29 (32)
287 1x4j_A Ring finger protein 38; 50.8 0.72 2.4E-05 30.3 -3.3 42 43-86 20-71 (75)
288 1va1_A Transcription factor SP 50.3 12 0.0004 20.2 2.4 25 46-71 8-35 (37)
289 1jm7_A BRCA1, breast cancer ty 50.2 2.9 0.0001 28.9 -0.3 43 45-87 20-70 (112)
290 2wbt_A B-129; zinc finger; 2.7 49.9 12 0.00042 25.7 2.9 25 46-70 100-125 (129)
291 1z6u_A NP95-like ring finger p 49.8 3 0.0001 31.6 -0.4 43 44-87 76-125 (150)
292 1yuz_A Nigerythrin; rubrythrin 49.4 5.9 0.0002 31.7 1.3 27 44-84 169-195 (202)
293 3cc2_Z 50S ribosomal protein L 49.2 5 0.00017 30.6 0.8 32 42-85 56-88 (116)
294 1dx8_A Rubredoxin; electron tr 48.0 7.4 0.00025 26.8 1.5 7 77-83 42-48 (70)
295 1rmd_A RAG1; V(D)J recombinati 46.3 1.2 4.2E-05 31.5 -2.9 45 42-87 19-70 (116)
296 2eox_A Zinc finger protein 473 46.2 4.6 0.00016 22.6 0.2 25 46-71 12-37 (44)
297 2ea5_A Cell growth regulator w 46.1 5.7 0.00019 26.2 0.6 38 44-87 13-58 (68)
298 2djr_A Zinc finger BED domain- 45.8 5.8 0.0002 27.8 0.6 18 86-103 48-65 (76)
299 1jm7_B BARD1, BRCA1-associated 45.0 4.8 0.00016 28.6 0.1 37 45-85 21-65 (117)
300 2jr6_A UPF0434 protein NMA0874 44.6 6 0.0002 27.1 0.6 31 42-83 4-34 (68)
301 1s24_A Rubredoxin 2; electron 43.9 7.7 0.00026 28.0 1.1 9 45-53 34-42 (87)
302 2kdx_A HYPA, hydrogenase/ureas 43.8 5.4 0.00018 29.1 0.2 30 42-84 69-99 (119)
303 1yk4_A Rubredoxin, RD; electro 43.5 8.3 0.00028 25.1 1.1 13 42-54 31-43 (52)
304 1wir_A Protein arginine N-meth 43.4 14 0.00047 28.0 2.5 33 71-103 11-45 (121)
305 2ecm_A Ring finger and CHY zin 43.3 23 0.00077 21.1 3.1 12 46-57 5-16 (55)
306 2v3b_B Rubredoxin 2, rubredoxi 43.0 8.5 0.00029 25.3 1.1 13 42-54 32-44 (55)
307 1fv5_A First zinc finger of U- 43.0 11 0.00039 22.0 1.6 20 46-65 8-28 (36)
308 2eln_A Zinc finger protein 406 42.9 14 0.00049 21.6 2.0 22 46-67 9-33 (38)
309 1v87_A Deltex protein 2; ring- 42.4 1.3 4.6E-05 31.0 -3.1 12 74-85 81-92 (114)
310 1zw8_A Zinc-responsive transcr 42.3 21 0.00073 23.1 3.0 26 44-69 36-64 (64)
311 2kn9_A Rubredoxin; metalloprot 41.9 11 0.00037 26.9 1.6 14 41-54 55-68 (81)
312 1g25_A CDK-activating kinase a 41.8 2 7E-05 27.2 -2.1 41 46-87 3-55 (65)
313 2ab3_A ZNF29; zinc finger prot 41.0 12 0.0004 18.3 1.3 22 46-67 2-26 (29)
314 4rxn_A Rubredoxin; electron tr 40.7 9.7 0.00033 25.1 1.1 13 42-54 32-44 (54)
315 2a25_A Ubiquitin ligase SIAH1; 40.7 10 0.00035 29.9 1.5 12 87-98 53-64 (193)
316 3mkr_B Coatomer subunit alpha; 40.5 14 0.00047 32.3 2.3 32 46-90 278-310 (320)
317 2js4_A UPF0434 protein BB2007; 40.4 6.7 0.00023 27.0 0.3 31 42-83 4-34 (70)
318 1i7f_A Heat shock protein 33; 39.0 6.4 0.00022 33.4 0.0 19 44-62 258-278 (292)
319 1bhi_A CRE-BP1, ATF-2; CRE bin 38.9 19 0.00066 19.1 2.1 25 46-71 6-33 (38)
320 4ap4_A E3 ubiquitin ligase RNF 38.9 5.5 0.00019 27.8 -0.4 35 47-86 49-83 (133)
321 4ayc_A E3 ubiquitin-protein li 37.9 6 0.00021 29.0 -0.3 39 45-85 52-97 (138)
322 2hf1_A Tetraacyldisaccharide-1 37.4 6.1 0.00021 27.1 -0.3 31 42-83 4-34 (68)
323 2pk7_A Uncharacterized protein 37.4 7 0.00024 26.8 -0.0 31 42-83 4-34 (69)
324 1x3c_A Zinc finger protein 292 37.2 28 0.00096 24.4 3.1 28 46-73 27-57 (73)
325 1l8d_A DNA double-strand break 36.5 17 0.00057 25.7 1.9 11 48-58 49-59 (112)
326 2jny_A Uncharacterized BCR; st 36.0 8.3 0.00028 26.4 0.2 32 41-83 5-36 (67)
327 3flo_B DNA polymerase alpha ca 35.2 3.2 0.00011 33.9 -2.3 39 44-85 20-59 (206)
328 3noy_A 4-hydroxy-3-methylbut-2 32.5 25 0.00085 31.4 2.7 24 45-68 270-294 (366)
329 3vk6_A E3 ubiquitin-protein li 32.3 47 0.0016 24.6 3.8 34 45-78 57-94 (101)
330 1chc_A Equine herpes virus-1 r 31.8 6.2 0.00021 24.9 -1.0 39 46-86 5-51 (68)
331 2vje_B MDM4 protein; proto-onc 31.3 2.5 8.5E-05 27.4 -3.0 41 44-86 5-55 (63)
332 2akl_A PHNA-like protein PA012 29.9 22 0.00077 27.8 1.8 27 46-84 27-53 (138)
333 1dl6_A Transcription factor II 29.0 12 0.00042 24.5 0.1 35 45-90 10-45 (58)
334 2kpi_A Uncharacterized protein 29.0 13 0.00045 24.4 0.2 31 40-83 4-36 (56)
335 4dvc_A Thiol:disulfide interch 28.1 6.8 0.00023 28.3 -1.4 10 45-54 29-38 (184)
336 1x6f_A Zinc finger protein 462 28.0 29 0.001 23.5 1.9 50 45-98 24-74 (88)
337 3gn3_A Putative protein-disulf 27.7 6.7 0.00023 30.1 -1.6 20 45-64 22-42 (182)
338 2jrr_A Uncharacterized protein 27.6 18 0.00063 24.9 0.8 10 45-54 39-48 (67)
339 4ic3_A E3 ubiquitin-protein li 27.5 9.7 0.00033 25.1 -0.6 38 44-87 22-67 (74)
340 2jvm_A Uncharacterized protein 27.4 20 0.00069 25.6 1.0 12 45-56 52-63 (80)
341 4a0k_B E3 ubiquitin-protein li 26.6 14 0.00047 27.4 0.0 37 48-84 50-109 (117)
342 2ecg_A Baculoviral IAP repeat- 26.2 2 7E-05 28.4 -4.2 38 44-87 23-68 (75)
343 2l8e_A Polyhomeotic-like prote 26.1 26 0.00089 22.6 1.3 12 45-56 17-28 (49)
344 1ncs_A Peptide M30F, transcrip 25.3 21 0.00071 20.5 0.6 22 46-67 18-42 (47)
345 2znm_A Thiol:disulfide interch 25.2 23 0.0008 26.0 1.1 10 45-54 30-39 (195)
346 3k7a_M Transcription initiatio 24.4 36 0.0012 28.8 2.2 41 42-91 17-58 (345)
347 3mv2_A Coatomer subunit alpha; 23.7 20 0.00067 31.4 0.4 31 45-88 286-317 (325)
348 3j20_Y 30S ribosomal protein S 22.4 13 0.00044 23.9 -0.7 15 148-162 36-50 (50)
349 2bai_A Genome polyprotein; zin 22.0 10 0.00035 22.9 -1.2 10 76-85 17-26 (32)
350 2czr_A TBP-interacting protein 22.0 17 0.00056 30.3 -0.4 25 43-67 151-175 (226)
351 3mwm_A ZUR, putative metal upt 21.9 31 0.0011 25.3 1.2 40 45-84 86-136 (139)
352 3al0_B Aspartyl/glutamyl-tRNA( 20.9 18 0.00061 33.2 -0.4 17 70-86 31-47 (482)
353 3h0l_B Aspartyl/glutamyl-tRNA( 20.9 17 0.00059 33.2 -0.5 20 67-86 29-48 (478)
354 3dpl_R Ring-box protein 1; ubi 20.1 6.7 0.00023 28.3 -2.8 10 75-84 89-98 (106)
No 1
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=97.52 E-value=0.0001 Score=46.64 Aligned_cols=54 Identities=26% Similarity=0.647 Sum_probs=45.0
Q ss_pred CcccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 45 ~~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
..|.|+.|++.| ....|..|....|..+.+.-.|++|...- ..++..|+...|+
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 369999999944 68889999999897667788999997763 5689999988886
No 2
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.49 E-value=0.00012 Score=47.88 Aligned_cols=55 Identities=20% Similarity=0.384 Sum_probs=46.3
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhcccch
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGHL 100 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~~~ 100 (171)
.|.|++|++ =.....|..|+...|..+.+.-.|++|...- ..+|..|+...|+..
T Consensus 15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~ 72 (77)
T 2ct1_A 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS 72 (77)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence 599999999 5567899999998998777888999998763 568999998888643
No 3
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=97.06 E-value=0.0009 Score=40.83 Aligned_cols=51 Identities=24% Similarity=0.386 Sum_probs=39.3
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
.|.|++|++ --+...|..|+.. |.. .++..|++|...- ..+|..|+...|+
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRT-HTG-EKPYKCEFCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHH-HHC-CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred CccCCCCcchhCChHHHHHHHHH-cCC-CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence 699999999 5577889999885 543 4567999998753 6689999988774
No 4
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.91 E-value=0.0013 Score=43.81 Aligned_cols=52 Identities=19% Similarity=0.393 Sum_probs=26.9
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhcc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH 97 (171)
.|.|+.|++ --....|..|+...|....+.-.|++|...- ..+|..|+...|
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H 89 (95)
T 2yt9_A 35 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89 (95)
T ss_dssp SEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTS
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhc
Confidence 366666666 3345556666654333323455666665432 345555654444
No 5
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.69 E-value=0.0019 Score=42.08 Aligned_cols=54 Identities=20% Similarity=0.320 Sum_probs=43.0
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCC--CCccccCCccccc--hhhHHhhhhhcccc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCE--SKVTVCPICSVKV--ARDMLSHITLQHGH 99 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e--~k~vVCPVCaa~~--s~d~l~HL~~qH~~ 99 (171)
.|.|++|++ =-....|..|+...|..+ .+...|++|...- ..+|..|+...|+.
T Consensus 15 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 15 PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCC
Confidence 599999999 556788999998888754 3678999998763 56899999876654
No 6
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.67 E-value=0.0017 Score=41.50 Aligned_cols=52 Identities=23% Similarity=0.337 Sum_probs=40.8
Q ss_pred CcccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 45 ~~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
..|.|++|++ =-....|..|+.. |.. .+.-.|++|...- ..+|..|+...|+
T Consensus 8 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~ 62 (70)
T 1x5w_A 8 HPEKCSECSYSCSSKAALRIHERI-HCT-DRPFKCNYCSFDTKQPSNLSKHMKKFHG 62 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGG-GCC-SCSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-cCC-CCCEeCCCCCCccCCHHHHHHHHHHHhC
Confidence 4699999999 4567889999976 654 3567999998764 5689999887775
No 7
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.67 E-value=0.0013 Score=42.05 Aligned_cols=48 Identities=29% Similarity=0.676 Sum_probs=39.3
Q ss_pred CcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccC-Ccccc--chhhHHhhhhh
Q 030808 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCP-ICSVK--VARDMLSHITL 95 (171)
Q Consensus 45 ~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCP-VCaa~--~s~d~l~HL~~ 95 (171)
..|.|++|++.|....|..|... ...++..|+ +|... ...+|..|+..
T Consensus 9 ~~~~C~~C~k~f~~~~L~~H~~~---~~~~p~~C~~~C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 9 RTQPCTYCTKEFVFDTIQSHQYQ---CPRLPVACPNQCGVGTVAREDLPGHLKD 59 (66)
T ss_dssp CEEECSSSCCEEEHHHHHHHHHH---CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred CCeeccccCCccCHHHHHHHHHH---cCCcCccCCcccCcccccHHHHHHHHHh
Confidence 46999999997778999999876 566789999 99775 35588888864
No 8
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=96.55 E-value=0.0042 Score=37.74 Aligned_cols=50 Identities=16% Similarity=0.349 Sum_probs=38.2
Q ss_pred ccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 47 FPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 47 F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
|.|+.|+.. -....|..|... |.. .+.-.|++|...- ..+|..|+...|+
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT-HTD-VRPYHCTYCNFSFKTKGNLTKHMKSKAH 54 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH-TSS-CCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred CcCCCCcCcCCCHHHHHHHHHh-cCC-CCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence 889999994 467889999876 543 4567899997763 5688899876553
No 9
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=96.42 E-value=0.005 Score=37.91 Aligned_cols=51 Identities=24% Similarity=0.473 Sum_probs=39.1
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
.|.|+.|+..| ....|..|... |.. .+.-.|++|...- ..+|..|+...|.
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~ 55 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRS-HTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHS 55 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHT-TTS-SCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred cCcCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence 48999999954 67889999876 543 3567899998764 5688889866664
No 10
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.33 E-value=0.0011 Score=45.74 Aligned_cols=54 Identities=19% Similarity=0.328 Sum_probs=41.8
Q ss_pred CcccCCCCCCCC--CHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhcccc
Q 030808 45 PDFPCPYCYEDF--DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (171)
Q Consensus 45 ~~F~CPfC~e~f--D~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~~ 99 (171)
..|.|++|++.| ....|..|+...|. ..+.-.|++|...- ..+|..|+...|+.
T Consensus 23 ~~~~C~~C~k~f~~~~~~L~~H~~~h~~-~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 23 GEAVCPTCNVVTRKTLVGLKKHMEVCQK-LQDALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp SCCCCTTTCCCCSSCSHHHHHHHHHHHH-HHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CCcCCCCCCCChhhhHHHHHHHHHHHcC-CCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 369999999976 58899999976443 24567999997763 56899999877753
No 11
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.30 E-value=0.0047 Score=43.21 Aligned_cols=50 Identities=24% Similarity=0.505 Sum_probs=39.7
Q ss_pred cccCCCCCCCC--CHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 46 DFPCPYCYEDF--DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 46 ~F~CPfC~e~f--D~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
.|.|+.|++.| ....|..|+.. | ..+.-.|++|...- ..+|..|+...|.
T Consensus 34 ~~~C~~C~k~F~~~~~~L~~H~~~-h--~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~ 87 (96)
T 2ctd_A 34 SVSCPTCQAVGRKTIEGLKKHMEN-C--KQEMFTCHHCGKQLRSLAGMKYHVMANHN 87 (96)
T ss_dssp CEECTTTCSCEESSHHHHHHHHHH-H--CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred CcCCCCCCCCcccCHHHHHHHHHH-H--CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence 59999999988 78999999875 6 45778999997764 5688899544553
No 12
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=96.27 E-value=0.0067 Score=43.90 Aligned_cols=57 Identities=21% Similarity=0.406 Sum_probs=43.6
Q ss_pred CCCCcccCCCCCCCC-CHHHHHHhhhhhhcCCCCc-------cccCCccccc--hhhHHhhhhhccc
Q 030808 42 DVRPDFPCPYCYEDF-DIASLCSHLEDEHSCESKV-------TVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 42 d~r~~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~-------vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
+....|.|+.|++.| +...|..|+...|..+... ..|++|...- ..+|..|+...++
T Consensus 21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 87 (155)
T 2rpc_A 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (155)
T ss_dssp TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC
T ss_pred hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC
Confidence 445689999999944 6888999999989876432 5799997753 5678899876543
No 13
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.25 E-value=0.0043 Score=39.92 Aligned_cols=51 Identities=18% Similarity=0.312 Sum_probs=38.9
Q ss_pred CcccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhcc
Q 030808 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (171)
Q Consensus 45 ~~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH 97 (171)
..|.|++|++ =-....|..|+.. |.. .+.-.|++|...- ..+|..|+...+
T Consensus 13 k~~~C~~C~k~f~~~~~L~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~ 66 (72)
T 1x6e_A 13 KPYGCVECGKAFSRSSILVQHQRV-HTG-EKPYKCLECGKAFSQNSGLINHQRIHT 66 (72)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHG-GGC-SCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred CCccCCCCCCccCCHHHHHHHHHh-cCC-CCCeECCCCCcccCCHHHHHHHHHhcC
Confidence 3699999999 4567889999875 543 4567999998763 568888987654
No 14
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.12 E-value=0.0049 Score=39.99 Aligned_cols=56 Identities=20% Similarity=0.284 Sum_probs=42.3
Q ss_pred CcccCCCCCC-CCCHHHHHHhhhhhhcC-CCCccccCCccccc--hhhHHhhhhhcccch
Q 030808 45 PDFPCPYCYE-DFDIASLCSHLEDEHSC-ESKVTVCPICSVKV--ARDMLSHITLQHGHL 100 (171)
Q Consensus 45 ~~F~CPfC~e-~fD~~~L~~H~~eeH~~-e~k~vVCPVCaa~~--s~d~l~HL~~qH~~~ 100 (171)
..|.|++|++ --....|..|+...+.. ..+.-.|++|...- ..+|..|+...|...
T Consensus 6 k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~ 65 (78)
T 2d9h_A 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65 (78)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred cCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence 3699999999 44678899998764432 35678999998764 568999998877543
No 15
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.10 E-value=0.0049 Score=42.28 Aligned_cols=54 Identities=20% Similarity=0.293 Sum_probs=37.8
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhcccchh
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGHLF 101 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~~~~ 101 (171)
.|.|++|++ --....|..|+.. |.. .+.-.|++|...- ..+|..|+...|...-
T Consensus 37 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~ 93 (110)
T 2csh_A 37 PYGCGVCGKKFKMKHHLVGHMKI-HTG-IKPYECNICAKRFMWRDSFHRHVTSCTKSYE 93 (110)
T ss_dssp SEECTTTSCEESSSHHHHHHHTT-TCC-CCCEECSSSCCEESCHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHH-cCC-CCCeeCCCCcchhcCHHHHHHHHHHcccccc
Confidence 588999988 4456778888764 433 3457899997653 5688888887775543
No 16
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=96.05 E-value=0.0064 Score=39.03 Aligned_cols=50 Identities=18% Similarity=0.468 Sum_probs=29.3
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhcc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH 97 (171)
.|.|++|++ --+...|..|....+. .+.-.|++|...- ..++..|+...+
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~ 81 (82)
T 2kmk_A 29 PYPCQYCGKRFHQKSDMKKHTFIHTG--EKPHKCQVCGKAFSQSSNLITHSRKHT 81 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHT--CCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred CeeCCcCChhhCCHHHHHHHHHHhcC--CCCCcCCCcchhhCChHHHHHHHHhhC
Confidence 477777777 3356667777654332 2445677776542 446666665443
No 17
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.03 E-value=0.0084 Score=41.27 Aligned_cols=20 Identities=30% Similarity=0.546 Sum_probs=8.9
Q ss_pred ccCCCCCCCC-CHHHHHHhhh
Q 030808 47 FPCPYCYEDF-DIASLCSHLE 66 (171)
Q Consensus 47 F~CPfC~e~f-D~~~L~~H~~ 66 (171)
|.||+|++.| +...|..|+.
T Consensus 8 ~~C~~C~~~f~~~~~l~~H~~ 28 (124)
T 2dlq_A 8 VECPTCHKKFLSKYYLKVHNR 28 (124)
T ss_dssp CCCTTTCCCCSSHHHHHHHHH
T ss_pred CCCCCCCCcCCCHHHHHHHHH
Confidence 4455554422 3444444443
No 18
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.02 E-value=0.015 Score=38.62 Aligned_cols=54 Identities=20% Similarity=0.370 Sum_probs=40.6
Q ss_pred CCcccCCCCCCCC-CHHHHHHhhhhhhcCCCCc-------cccCCccccc--hhhHHhhhhhcc
Q 030808 44 RPDFPCPYCYEDF-DIASLCSHLEDEHSCESKV-------TVCPICSVKV--ARDMLSHITLQH 97 (171)
Q Consensus 44 r~~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~-------vVCPVCaa~~--s~d~l~HL~~qH 97 (171)
...|+|+.|++.| ....|..|+...|..+... -.|++|...- ..+|..|+...+
T Consensus 23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~ 86 (95)
T 2ej4_A 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86 (95)
T ss_dssp CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHH
T ss_pred cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcC
Confidence 3468899999955 6788999998878765321 6899997764 568889987643
No 19
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=96.00 E-value=0.0097 Score=38.95 Aligned_cols=50 Identities=24% Similarity=0.482 Sum_probs=29.9
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhcc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH 97 (171)
.|.|++|++ --....|..|+.. |.. .+.-.|++|...- ..+|..|+...+
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~ 86 (90)
T 1a1h_A 34 PFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHTKIHL 86 (90)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHGGGG
T ss_pred CccCCCCCcccCCHHHHHHHHHH-cCC-CCCccCCCCCchhCCHHHHHHHHHHhc
Confidence 477777777 4456667777663 332 2445677776543 446777766544
No 20
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.99 E-value=0.011 Score=38.37 Aligned_cols=52 Identities=21% Similarity=0.489 Sum_probs=39.6
Q ss_pred CcccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 45 ~~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
..|.|+.|++.| ....|..|+.. |.. .+.-.|++|...- ..+|..|+...++
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 71 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRT-HTG-EKPYKCDECGKAFIQRSHLIGHHRVHTG 71 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTT-TCC-SCSEECSSSCCEESSHHHHHHHGGGSCC
T ss_pred CCEECCCCCcccCCHHHHHHHHHH-cCC-CcCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence 469999999955 57889999875 543 3567999998763 5688999876543
No 21
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.99 E-value=0.0081 Score=39.93 Aligned_cols=47 Identities=19% Similarity=0.400 Sum_probs=20.2
Q ss_pred ccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhh
Q 030808 47 FPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITL 95 (171)
Q Consensus 47 F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~ 95 (171)
|.|++|++.| +...|..|+...+ . .+.-.|++|...- ..++..|+..
T Consensus 9 ~~C~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~ 58 (96)
T 2dmd_A 9 HKCEVCGKCFSRKDKLKTHMRCHT-G-VKPYKCKTCDYAAADSSSLNKHLRI 58 (96)
T ss_dssp CCBTTTTBCCCCHHHHHHHGGGCC-C-CCSEECSSSCCEESSHHHHHHHHHH
T ss_pred eECCCCCCccCCHHHHHHHHHhcC-C-CCCEeCCCCCCccCCHHHHHHHHHH
Confidence 5555555532 3444555544221 1 2234455554432 3344455443
No 22
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=95.97 E-value=0.014 Score=37.47 Aligned_cols=53 Identities=25% Similarity=0.531 Sum_probs=39.7
Q ss_pred CCcccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 44 RPDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 44 r~~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
...|.|+.|++.| ....|..|... |.. .+.-.|++|...- ..+|..|+...++
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 70 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTV-HTG-EKPYRCNICGAQFNRPANLKTHTRIHSG 70 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHH-HCC-CCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred CCCeECCCCCceeCCHHHHHHHHHH-cCC-CCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence 3579999999955 67889999865 543 3567899998763 5688899876443
No 23
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.91 E-value=0.0027 Score=42.84 Aligned_cols=48 Identities=21% Similarity=0.409 Sum_probs=39.8
Q ss_pred CcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCccccc-hhhHHhhhhh
Q 030808 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV-ARDMLSHITL 95 (171)
Q Consensus 45 ~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~-s~d~l~HL~~ 95 (171)
..+.|+||++.|....|-.|. .|.. .+++.||.|...+ ..+|..|+..
T Consensus 16 r~~~C~~C~~~~~~~~L~~H~--~~c~-~~~~~C~~C~~~~~~~~l~~H~~~ 64 (75)
T 2d9k_A 16 RLAVCQHCDLELSILKLKEHE--DYCG-ARTELCGNCGRNVLVKDLKTHPEV 64 (75)
T ss_dssp CCEECSSSCCEECHHHHHHHH--HHHH-HCEEECSSSCCEEETTGGGTHHHH
T ss_pred cccCCcccChHhhHHHHHHHH--hHcC-CCceEcccCCCcCcHHHHHHHHHH
Confidence 469999999999999999997 5654 5678999998764 5688888865
No 24
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=95.82 E-value=0.01 Score=41.90 Aligned_cols=50 Identities=28% Similarity=0.603 Sum_probs=39.6
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhcccc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~~ 99 (171)
.|.|++|++ =-....|..|... | .++-.|++|...- ..+|..|+...|+-
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~-H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRY-T---EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-T---CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-C---CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence 599999999 4467789999875 6 4567899997763 66899999888764
No 25
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.80 E-value=0.0097 Score=40.96 Aligned_cols=53 Identities=23% Similarity=0.483 Sum_probs=39.1
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhc-CCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHS-CESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~-~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
.|.|++|++ -.+...|..|....|. ...+...|++|...- ..+|..|+...++
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (124)
T 2dlq_A 35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91 (124)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence 588999999 5578888999887643 345567899997753 5578888876554
No 26
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=95.77 E-value=0.01 Score=38.03 Aligned_cols=50 Identities=28% Similarity=0.495 Sum_probs=38.2
Q ss_pred ccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 47 F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
|.|+.|++ =-+...|..|+.. |.. .+...|++|...- ..++..|+...++
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLI-HSD-TRPYPCQYCGKRFHQKSDMKKHTFIHTG 54 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHH-HHT-CCCEECSSSCCEESSHHHHHHHHHHHHT
T ss_pred ccCCCCcccccCchhHHHHHHH-cCC-CCCeeCCcCChhhCCHHHHHHHHHHhcC
Confidence 88999999 5578889999986 432 4567999998764 5688888875543
No 27
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=95.60 E-value=0.012 Score=39.10 Aligned_cols=56 Identities=25% Similarity=0.440 Sum_probs=42.6
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhcccchhhh
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGHLFKL 103 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~~~~k~ 103 (171)
.|.|+.|+.. -....|..|... |.. .+.-.|++|...- ..+|..|+...|+..|..
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c 61 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHRDIQHILPILE 61 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHHHHTHHHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCCCCccCCHHHHHHHHHHhCCCcchH
Confidence 5899999994 467889999875 544 3557899997753 568999999988755543
No 28
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=95.56 E-value=0.019 Score=38.86 Aligned_cols=53 Identities=21% Similarity=0.474 Sum_probs=37.6
Q ss_pred CCcccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 44 RPDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 44 r~~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
...|.|++|++.| +...|..|+.. |.. .+...|++|...- ..++..|+...++
T Consensus 15 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 70 (106)
T 2ee8_A 15 KKEFICKFCGRHFTKSYNLLIHERT-HTD-ERPYTCDICHKAFRRQDHLRDHRYIHSK 70 (106)
T ss_dssp CCCCBCSSSCCBCSSHHHHHHHHHH-HCC-SCCCBCSSSCCBCSCHHHHHHHGGGSCC
T ss_pred CcCeECCCCCCccCCHHHHHHHHHH-cCC-CCCcCCCCccchhCCHHHHHHHHHHhCC
Confidence 3468999999954 67788888875 332 3557899997653 5578888876554
No 29
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.55 E-value=0.016 Score=38.40 Aligned_cols=52 Identities=27% Similarity=0.475 Sum_probs=40.2
Q ss_pred CcccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 45 ~~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
..|.|++|++ --+...|..|+.. |.. .+...|++|...- ..+|..|+...|+
T Consensus 35 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 89 (96)
T 2dmd_A 35 KPYKCKTCDYAAADSSSLNKHLRI-HSD-ERPFKCQICPYASRNSSQLTVHLRSHTG 89 (96)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH-SCC-CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred CCEeCCCCCCccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHhcC
Confidence 3699999999 5577889999975 433 4567999998763 5689999877664
No 30
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=95.49 E-value=0.032 Score=37.74 Aligned_cols=52 Identities=25% Similarity=0.349 Sum_probs=39.2
Q ss_pred CcccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 45 PDFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 45 ~~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
..|.|++|++. -....|..|... |.. .+.-.|++|...- ..+|..|+...++
T Consensus 44 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 98 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQDHLRDHRYI-HSK-EKPFKCQECGKGFCQSRTLAVHKTLHMQ 98 (106)
T ss_dssp CCCBCSSSCCBCSCHHHHHHHGGG-SCC-CCTTSCSSSCCCCSSHHHHHHHHHHTTS
T ss_pred CCcCCCCccchhCCHHHHHHHHHH-hCC-CCCeECCCcCCcccCHHHHHHHHHHhCC
Confidence 35999999994 478899999765 433 3567899998763 5689999876554
No 31
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=95.33 E-value=0.019 Score=40.13 Aligned_cols=52 Identities=25% Similarity=0.430 Sum_probs=40.9
Q ss_pred CcccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 45 ~~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
..|.||+|++.| ....|..|+.. |.. .++-.|++|...- ..+|..|+...|.
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~-H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~ 81 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRL-LHA-AQVFPCKYCPATFYSSPGLTRHINKCHP 81 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHT-TSC-SSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhh-ccC-CCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence 469999999955 57889999876 433 4678999998763 6789999987774
No 32
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.25 E-value=0.017 Score=33.75 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=27.6
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++. -....|..|....|..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~~H~~~-k~~~C~~C 47 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYHTGE-KPSGPSSG 47 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTTTTS-CSSSCCCC
T ss_pred CEECCccCchhCChHHHHHHhHhhcCCC-CCCCCCCC
Confidence 5999999994 45688899987567654 56789988
No 33
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.08 E-value=0.022 Score=39.01 Aligned_cols=45 Identities=22% Similarity=0.479 Sum_probs=31.4
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhh
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHIT 94 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~ 94 (171)
.|.|++|++.| +...|..|... | .+.-.|++|...- ..+|..|++
T Consensus 16 ~~~C~~C~~~f~~~~~l~~H~~~-H---~~~~~C~~C~~~f~~~~~l~~H~~ 63 (107)
T 1wjp_A 16 VYQCRLCNAKLSSLLEQGSHERL-C---RNAAVCPYCSLRFFSPELKQEHES 63 (107)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-H---HHSBCCTTTCCCBSSHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHH-C---CCCccCCCCCCccCCHHHHHHHHH
Confidence 58888888844 56778888766 4 2456788886653 457777874
No 34
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.07 E-value=0.018 Score=38.09 Aligned_cols=52 Identities=29% Similarity=0.577 Sum_probs=40.4
Q ss_pred CcccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 45 ~~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
..|.|++|++.| +...|..|+.. |.. .+.-.|++|...- ..+|..|+...|+
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 60 (95)
T 2yt9_A 6 SGVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDG 60 (95)
T ss_dssp SCEECSSSCCEESSSHHHHHHHHH-SCS-SCSEECSSSCCEESCHHHHHHHHHHHCC
T ss_pred CCeECCCCCCccCChHHHHHHHHh-cCC-CCCCcCCCCCCccCCHHHHHHHHHHhcC
Confidence 469999999954 67889999875 543 3567999998763 5689999987775
No 35
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.05 E-value=0.026 Score=32.95 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=26.3
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++. -....|..|.. .|..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~C 46 (46)
T 2ytn_A 12 PYKCNECGKVFTQNSHLARHRG-IHTGE-KPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHGG-GTSCC-CCCSCCCC
T ss_pred CeECCCCCCeeCCHHHHHHHhh-hcCCC-CCCCCCCC
Confidence 5999999994 45678889965 46544 67789998
No 36
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=95.00 E-value=0.0034 Score=41.82 Aligned_cols=51 Identities=10% Similarity=0.039 Sum_probs=41.9
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhcccc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~~ 99 (171)
.|.|++|+. =-....|..|....|. ...+|+.|...- ..+|..||...|+.
T Consensus 31 ~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~c~~C~~~f~~~~~L~~H~~~~h~~ 84 (88)
T 1llm_C 31 PFACDICGRKFARSDERKRHRDIQHI---LPILEDKVEELLSKNYHLENEVARLKKL 84 (88)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHHHhCC---CcchHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 599999999 4477899999998884 678999997754 55799999887754
No 37
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=95.00 E-value=0.028 Score=32.83 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=26.5
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNV-HVG-EKPSGPSSG 46 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGG-GSS-SSCSCSSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCcCCCCC
Confidence 5999999994 456788999765 654 356789998
No 38
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.86 E-value=0.021 Score=33.38 Aligned_cols=35 Identities=20% Similarity=0.135 Sum_probs=27.0
Q ss_pred CcccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 45 ~~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
..|.|++|++ =-....|..|... |..+ ++-.|++|
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2eq0_A 11 KPYKCHECGKVFRRNSHLARHQLI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CCEECTTTCCEESSHHHHHHHHTT-TCCC-CCSCCSCC
T ss_pred CCeECCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 3599999999 4567788899754 6554 66789998
No 39
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=94.85 E-value=0.023 Score=33.18 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=26.6
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|... |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2ema_A 12 RYKCNECGKVFSRNSQLSQHQKI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTG-GGCC-CCCSSSCC
T ss_pred CcCCCCCcchhCCHHHHHHHHHh-cCCC-CCCCCCCC
Confidence 599999999 4567788999765 6544 56789998
No 40
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.81 E-value=0.032 Score=32.42 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=26.5
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++.| ....|..|.. .|..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2eov_A 12 PYKCSDCGKSFTWKSRLRIHQK-CHTGE-RHSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHH-HHSCC-SSCCSCCC
T ss_pred CccCCccChhhCCHHHHHHHHH-hcCCC-CCCCCCCC
Confidence 59999999944 5688999975 56554 56789998
No 41
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.79 E-value=0.029 Score=32.65 Aligned_cols=34 Identities=15% Similarity=0.064 Sum_probs=26.4
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRI-HTG-ENPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TTT-SCCSCCCCC
T ss_pred CeeCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999994 466789999765 654 356789998
No 42
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.67 E-value=0.027 Score=32.91 Aligned_cols=34 Identities=24% Similarity=0.201 Sum_probs=26.7
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|... |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2emy_A 12 PYECHECGKAFSRKYQLISHQRT-HAGE-KPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTTS-CCSCSSCC
T ss_pred CcCCCCCCcccCcHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 599999999 5567889999765 6543 56789998
No 43
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=94.62 E-value=0.039 Score=32.27 Aligned_cols=34 Identities=18% Similarity=0.178 Sum_probs=26.4
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHHH-HSS-CCCSSCCCC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 4566788899864 654 367789988
No 44
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=94.61 E-value=0.039 Score=36.13 Aligned_cols=48 Identities=23% Similarity=0.560 Sum_probs=38.1
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhh
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITL 95 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~ 95 (171)
-|.|+.|++.| ....|..|.. .|.. .++-.|++|...- ..+|..|+..
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~-~Ht~-ekp~~C~~C~k~F~~~~~L~~H~~~ 54 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRR-AHLG-YRPRSCPECGKCFRDQSEVNRHLKV 54 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHH-HHHT-CCCEECTTTCCEESSHHHHHHHGGG
T ss_pred CccCCCCCCEeCCHHHHHHHHH-HhCC-CcCeECCCCCCCcCCHHHHHHHhCc
Confidence 49999999955 5778999986 4765 4677999997763 6789999875
No 45
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.58 E-value=0.034 Score=32.63 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=26.5
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|... |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL-HTGQ-RPSGPSSG 46 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH-HHSC-CCCCCCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 599999999 4456788899865 6544 56789998
No 46
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.55 E-value=0.03 Score=32.69 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=26.6
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|.. .|.. .++-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~c 46 (46)
T 2ytk_A 12 PYKCNECGKVFTQNSHLTNHWR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HHSS-SSCSSCCCC
T ss_pred CEeCCcCCCccCCHHHHHHHHH-HHCC-CCCCCCCCC
Confidence 599999999 446788899986 4654 356789998
No 47
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.48 E-value=0.03 Score=32.67 Aligned_cols=34 Identities=24% Similarity=0.263 Sum_probs=26.6
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|.. .|..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~c 46 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQK-IHTGE-KPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHH-HHHCS-SCSSSCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHH-hcCCC-CCCCCCCC
Confidence 599999999 455678999976 56543 56789998
No 48
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=94.42 E-value=0.031 Score=34.23 Aligned_cols=39 Identities=18% Similarity=0.388 Sum_probs=31.0
Q ss_pred CcccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCcccc
Q 030808 45 PDFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVK 84 (171)
Q Consensus 45 ~~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVCaa~ 84 (171)
..|.|++|++. -....|..|+...|..+ +.-.|++|...
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~~-k~~~C~~C~k~ 50 (54)
T 2eps_A 11 KPYICQSCGKGFSRPDHLNGHIKQVHTSE-RPHKCQVWVSG 50 (54)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHTSCCC-CCCCSSSSCCS
T ss_pred CCeECCCCCcccCCHHHHHHHHHHhcCCC-CCccCCCCCCC
Confidence 36999999994 47788999998778654 56789999754
No 49
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=94.39 E-value=0.054 Score=37.47 Aligned_cols=51 Identities=25% Similarity=0.543 Sum_probs=38.2
Q ss_pred CcccCC--CCCCC-CCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 45 PDFPCP--YCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 45 ~~F~CP--fC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
..|.|| .|++. -+...|..|+. .| ..+.-.|++|...- ..++..|+...++
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 59 (124)
T 1ubd_C 4 RTIACPHKGCTKMFRDNSAMRKHLH-TH--GPRVHVCAECGKAFVESSKLKRHQLVHTG 59 (124)
T ss_dssp -CEECCSTTCCCEESSHHHHHHHHG-GG--SCCCEECTTTCCEESSHHHHHHHGGGTSC
T ss_pred CcccCCCCCCcCccCCHHHHHHHHH-Hc--CCCCeECCCCCchhCCHHHHHHHHHHcCC
Confidence 368999 89994 46788999986 46 56678899997753 5688889876543
No 50
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.37 E-value=0.03 Score=32.66 Aligned_cols=34 Identities=21% Similarity=0.180 Sum_probs=26.4
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++. -....|..|... |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQRI-HTGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TCCC-CCCSCCCC
T ss_pred CeECCCCCchhCChHHHHHHHhh-cCCC-CCCCCCCC
Confidence 5999999994 456788999765 6543 56789998
No 51
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.34 E-value=0.044 Score=31.83 Aligned_cols=34 Identities=21% Similarity=0.157 Sum_probs=26.3
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHERL-HSG-EKPSGPSSG 46 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHHH-CCS-SSCCCCCCC
T ss_pred CeECCCCCCccCchHHHHHHHHh-cCC-CCCCCCCCC
Confidence 5999999994 556789999754 654 356789988
No 52
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.33 E-value=0.053 Score=34.69 Aligned_cols=51 Identities=24% Similarity=0.505 Sum_probs=39.1
Q ss_pred cccCCC--CCC-CCCHHHHHHhhhhhhcCCCCccccCC--ccccc--hhhHHhhhhhcc
Q 030808 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQH 97 (171)
Q Consensus 46 ~F~CPf--C~e-~fD~~~L~~H~~eeH~~e~k~vVCPV--Caa~~--s~d~l~HL~~qH 97 (171)
.|.|++ |++ =-....|..|+...|..+ +.-.|++ |...- ..+|..|+...+
T Consensus 7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~-~~~~C~~~~C~k~f~~~~~L~~H~~~H~ 64 (79)
T 2dlk_A 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ-KSFSCPEPACGKSFNFKKHLKEHMKLHS 64 (79)
T ss_dssp SEECSSTTTCCEESSHHHHHHHHHHGGGSC-CCEECSCTTTCCEESSHHHHHHHHHHHH
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHHhCCC-CCeECCCCCCcCccCCHHHHHHHHHHhC
Confidence 588887 999 446889999998778754 5678998 97753 568888887543
No 53
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.32 E-value=0.047 Score=31.78 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=26.4
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++.| ....|..|.. .|..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~C 46 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSM-VHTAE-KPSGPSSG 46 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHH-HTTCC-CSSSCCCC
T ss_pred CcCCCcCCchhCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 59999999955 6778899966 46544 56789998
No 54
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.29 E-value=0.035 Score=32.34 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=27.0
Q ss_pred CcccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 45 ~~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
..|.|++|++ =-....|..|.. .|..+ ++-.|++|
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~c 46 (46)
T 2ep2_A 11 KPYECSICGKSFTKKSQLHVHQQ-IHTGE-KPSGPSSG 46 (46)
T ss_dssp CSEECSSSCCEESSHHHHHHHHH-TTSSC-CSCCSCCC
T ss_pred cCcCCCCCCcccCCHHHHHHHHH-HhCCC-CCCCCCCC
Confidence 3599999999 556788999976 46544 56789988
No 55
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.29 E-value=0.043 Score=32.07 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=26.6
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRT-HSG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTT-TCC-SCSSCCCCC
T ss_pred CcCCCccChhhCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4567889999765 654 356789988
No 56
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.26 E-value=0.038 Score=32.22 Aligned_cols=34 Identities=18% Similarity=0.126 Sum_probs=26.4
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~c 46 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQK-IHTK-QKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HTSC-CCCSSCSCC
T ss_pred CeECCCCChhhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence 599999999 456678999976 4654 466789998
No 57
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.26 E-value=0.036 Score=37.89 Aligned_cols=50 Identities=22% Similarity=0.321 Sum_probs=38.8
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
.|.|++|++. -....|..|.. |.. .+.-.|++|...- ..+|..|+...|.
T Consensus 42 ~~~C~~C~~~f~~~~~l~~H~~--H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 94 (107)
T 1wjp_A 42 AAVCPYCSLRFFSPELKQEHES--KCE-YKKLTCLECMRTFKSSFSIWRHQVEVHN 94 (107)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHH--HCS-TGGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred CccCCCCCCccCCHHHHHHHHH--cCC-CCCccCccccchhCCHHHHHHHHHHHcC
Confidence 5999999994 46788999983 654 4668999998763 5689999976663
No 58
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.20 E-value=0.036 Score=32.44 Aligned_cols=34 Identities=18% Similarity=0.062 Sum_probs=26.5
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em5_A 12 SHQCHECGRGFTLKSHLNQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TSC-SCCSSCCCC
T ss_pred CeECCcCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4567889999754 644 456789998
No 59
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.18 E-value=0.037 Score=32.34 Aligned_cols=34 Identities=24% Similarity=0.204 Sum_probs=26.5
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|... |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2eoo_A 12 PYGCNECGKNFGRHSHLIEHLKR-HFRE-KSSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHST-TSSCCSCC
T ss_pred CEEccccCcccCCHHHHHHHHHH-HcCC-CCCCCCCC
Confidence 599999999 4566789999765 6543 56789988
No 60
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.14 E-value=0.039 Score=32.16 Aligned_cols=34 Identities=24% Similarity=0.261 Sum_probs=26.7
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQR-SHSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HSCC-SSCCSSCCC
T ss_pred CcCCCCCCCcCCChHHHHHHHH-HhCC-CCCCCCCCC
Confidence 599999999 556788999975 4654 366789998
No 61
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.08 E-value=0.031 Score=32.63 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=27.2
Q ss_pred CcccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 45 ~~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
..|.|++|++ =-....|..|... |..+ ++-.|++|
T Consensus 11 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2en6_A 11 KPYGCNECGKTFSQKSILSAHQRT-HTGE-KPSGPSSG 46 (46)
T ss_dssp CCEEETTTTEEESSHHHHHHHHHH-HSSC-CCSSSCCC
T ss_pred cCeECCCCCcccCchHHHHHHHHH-cCCC-CCCCCCCC
Confidence 3699999999 4556889999875 6544 66789998
No 62
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.08 E-value=0.04 Score=32.02 Aligned_cols=34 Identities=18% Similarity=0.168 Sum_probs=26.6
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++ =-....|..|.. .|..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2eoe_A 12 PYKCNECGKVFTQNSHLANHQR-IHTGV-KPSGPSSG 46 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHG-GGSCC-CSCSSCCC
T ss_pred CeECCCcChhhCCHHHHHHHHH-HcCCC-CCCCCCCC
Confidence 599999999 556778889975 56544 66789998
No 63
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=94.06 E-value=0.038 Score=32.32 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=26.4
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++.| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKL-HTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHH-HSC-CSSCSCCCC
T ss_pred CcccCccCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 59999999954 56788899765 654 466789998
No 64
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=94.05 E-value=0.044 Score=31.80 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=26.3
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQRS-HTG-VKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGGG-SSS-CCCSCCTTC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4566788999754 654 456789998
No 65
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.98 E-value=0.056 Score=31.47 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=26.1
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++. -....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHT-TTTT-CCCCSSCCC
T ss_pred CeECCCCCceeCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 5999999994 45678889976 4644 356789988
No 66
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=93.94 E-value=0.047 Score=40.34 Aligned_cols=49 Identities=27% Similarity=0.327 Sum_probs=36.9
Q ss_pred CcccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhh
Q 030808 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITL 95 (171)
Q Consensus 45 ~~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~ 95 (171)
-.|.|+.|++ =-....|..|+. .|..+ ++-.|++|...- ..+|..|+..
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFN-IHSWE-KKYPCRYCEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHH-HHHCC-SCEECSSSSCEESSHHHHHHHHHH
T ss_pred cCeECCCCCCCcCCHHHHHHHHH-HcCCC-CCeeCCccCeecccccchhhhccc
Confidence 3699999999 456788999986 57644 567899997653 5678888765
No 67
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.92 E-value=0.086 Score=37.72 Aligned_cols=36 Identities=31% Similarity=0.465 Sum_probs=19.7
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcC-CCCccccCCc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSC-ESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~-e~k~vVCPVC 81 (171)
.|.|+.|++.| +...|..|+...|.. +.+.-+|++|
T Consensus 3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c 40 (155)
T 2gli_A 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG 40 (155)
T ss_dssp BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBT
T ss_pred cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCC
Confidence 46666666633 456666666665432 3344555543
No 68
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.91 E-value=0.041 Score=32.19 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=26.3
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|... |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWIT-HTRE-KPSGPSSG 46 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTH-HHHC-CCCSCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 599999999 4567889999766 5443 56789988
No 69
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=93.87 E-value=0.053 Score=31.45 Aligned_cols=34 Identities=21% Similarity=0.168 Sum_probs=26.4
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em9_A 12 PYNCKECGKSFRWASCLLKHQRV-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-GTS-CCCCSTTCC
T ss_pred CeECCccccccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999994 457889999754 654 356789988
No 70
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=93.86 E-value=0.083 Score=35.02 Aligned_cols=55 Identities=24% Similarity=0.441 Sum_probs=38.6
Q ss_pred CCCCcccCCC--CCC-CCCHHHHHHhhhhhhcCCCCccccC--Cccccc--hhhHHhhhhhccc
Q 030808 42 DVRPDFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCP--ICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 42 d~r~~F~CPf--C~e-~fD~~~L~~H~~eeH~~e~k~vVCP--VCaa~~--s~d~l~HL~~qH~ 98 (171)
+....|.|++ |+. --....|..|+.. |.. .+...|| +|...- ..+|..|+...++
T Consensus 11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 72 (100)
T 2ebt_A 11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRT-HTG-EKPYKCTWEGCDWRFARSDELTRHYRKHTG 72 (100)
T ss_dssp CSCCCEECCSSSCCCEESCHHHHHHHHHH-HSC-CCCEECCSSSCCCEESSHHHHHHHHHHHTS
T ss_pred ccCcceEcCCCCCCCcccCHHHHHHHHHH-hCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhCC
Confidence 3456799998 999 4478889999875 433 3557897 587653 5678888876554
No 71
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.86 E-value=0.054 Score=31.42 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=26.5
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHG-GGCC-CSCCSSCCC
T ss_pred CeECCCCChhhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 599999999 456788999985 5654 356789988
No 72
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=93.86 E-value=0.065 Score=33.95 Aligned_cols=49 Identities=24% Similarity=0.476 Sum_probs=36.4
Q ss_pred CcccCCC--CCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhh
Q 030808 45 PDFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITL 95 (171)
Q Consensus 45 ~~F~CPf--C~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~ 95 (171)
..|.||+ |++ --....|..|... |.. .+.-.|++|...- ..++..|+..
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIRI-HTG-QKPFQCRICMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHTT
T ss_pred CccCCcCCCCCCccCCHHHHHHHHHh-hCC-CCCeECCCCCchhCCHHHHHHHHHh
Confidence 4699996 999 5567889999764 554 3567899998763 5678888753
No 73
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=93.86 E-value=0.068 Score=34.77 Aligned_cols=51 Identities=25% Similarity=0.517 Sum_probs=37.8
Q ss_pred cccCCC--CCCC-CCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 46 DFPCPY--CYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 46 ~F~CPf--C~e~-fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
.|.||+ |++. -+...|..|+...+ . .+.-.|++|...- ..++..|+...++
T Consensus 4 ~~~C~~~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 59 (90)
T 1a1h_A 4 PYACPVESCDRRFSQSGSLTRHIRIHT-G-QKPFQCRICMRNFSRSDHLTTHIRTHTG 59 (90)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHHHHH-C-CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred ceECCCCCCCCccCCHHHHHHHHHHhC-C-CCCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 599995 9994 46788999987543 3 3567999998763 5688899875543
No 74
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.81 E-value=0.067 Score=31.01 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=26.1
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHTT-TTT-CSCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 5999999994 456788899754 654 356789988
No 75
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.81 E-value=0.026 Score=40.45 Aligned_cols=51 Identities=27% Similarity=0.509 Sum_probs=38.5
Q ss_pred cccCCC--CCC-CCCHHHHHHhhhhhhcCCCCccccCC--ccccc--hhhHHhhhhhccc
Q 030808 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 46 ~F~CPf--C~e-~fD~~~L~~H~~eeH~~e~k~vVCPV--Caa~~--s~d~l~HL~~qH~ 98 (171)
.|.||+ |++ =-+...|..|+.. |.. .+.-.|++ |...- ..+|..|+...|.
T Consensus 67 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 124 (155)
T 2gli_A 67 PHKCTFEGCRKSYSRLENLKTHLRS-HTG-EKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124 (155)
T ss_dssp CCCCCSTTCCCCCSSHHHHHHHHHH-TTT-CCCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred CccCCCCCCCCcccCHHHHHHHHHH-cCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 599997 999 5567889999976 443 45678998 97753 5689999866664
No 76
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.80 E-value=0.035 Score=32.26 Aligned_cols=34 Identities=21% Similarity=0.175 Sum_probs=26.2
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++.| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQRT-HVD-DKHSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH-CCS-CCCSCCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59999999944 56788999765 654 356789988
No 77
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.78 E-value=0.07 Score=31.11 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=26.3
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++.| ....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2elz_A 12 PYKCEDCGKGYNRRLNLDMHQR-VHMG-EKTSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHGG-GGGS-CCCCCSCCC
T ss_pred CeeCcccCchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 59999999954 5678889976 5654 456789988
No 78
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.73 E-value=0.055 Score=31.47 Aligned_cols=34 Identities=15% Similarity=0.150 Sum_probs=26.3
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRR-IHTG-YRPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HHTC-CCSSCSSCC
T ss_pred CeECCCCCCeeCChHHHHHHHH-HcCC-CCCCCCCCC
Confidence 599999999 455678999965 4654 356789998
No 79
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=93.71 E-value=0.066 Score=39.97 Aligned_cols=51 Identities=24% Similarity=0.496 Sum_probs=36.1
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
.|.|++|+. =-+...|..|+...+. .+.-.|++|...- ..+|..|+...++
T Consensus 105 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 105 PYACPECGKSFSQLAHLRAHQRTHTG--EKPYKCPECGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhCC--CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 588999988 4466778888875443 3456788887653 5578888876554
No 80
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=93.60 E-value=0.076 Score=33.95 Aligned_cols=50 Identities=22% Similarity=0.453 Sum_probs=25.0
Q ss_pred ccC--CCCCCCC-CHHHHHHhhhhhhcCCCCccccCC--ccccc--hhhHHhhhhhccc
Q 030808 47 FPC--PYCYEDF-DIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 47 F~C--PfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPV--Caa~~--s~d~l~HL~~qH~ 98 (171)
|.| +.|++.| ....|..|... |.. .+.-.||+ |...- ..++..|+...++
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred ccCCCCCCCcccCCHHHHHHHHHH-hCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 456 5566633 45556666533 332 23455655 65432 3455566655444
No 81
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.55 E-value=0.067 Score=31.10 Aligned_cols=34 Identities=18% Similarity=0.145 Sum_probs=26.5
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++ =-....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHMV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGGG-GTT-CCCSSTTCC
T ss_pred CccCCCccchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 5567889999764 644 456789998
No 82
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.52 E-value=0.063 Score=31.11 Aligned_cols=34 Identities=21% Similarity=0.158 Sum_probs=26.5
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++ =-....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSC-CCTTSSSCC
T ss_pred CeeCCCCChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 5567889999764 654 456789988
No 83
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.44 E-value=0.069 Score=31.14 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=26.4
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGGG-TSC-SSCSCCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4566788999864 543 466789998
No 84
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.43 E-value=0.064 Score=30.90 Aligned_cols=34 Identities=21% Similarity=0.212 Sum_probs=26.4
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++ =-....|..|... |.. .++-.|++|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 44 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQT-HAE-EKPSGPSSG 44 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HTS-SCSCSCCCC
T ss_pred CccCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 5557889999765 654 356789988
No 85
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.42 E-value=0.07 Score=38.38 Aligned_cols=52 Identities=23% Similarity=0.448 Sum_probs=39.4
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcC--CCCccccCCccccc--hhhHHhhhhhcc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSC--ESKVTVCPICSVKV--ARDMLSHITLQH 97 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~--e~k~vVCPVCaa~~--s~d~l~HL~~qH 97 (171)
.|.|++|++.| ....|..|....|.. ..++-.|++|...- ..+|..|+..-|
T Consensus 18 py~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~H 74 (102)
T 2ghf_A 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYH 74 (102)
T ss_dssp SEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTS
T ss_pred CcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhc
Confidence 59999999944 678899999877853 45678999997753 568889943334
No 86
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.31 E-value=0.077 Score=30.83 Aligned_cols=34 Identities=24% Similarity=0.194 Sum_probs=26.0
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQRI-HSG-KKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GSS-CCCSCSSCC
T ss_pred CeeCCCcCCccCCHHHHHHHHHH-hcC-CCCCCCCCC
Confidence 599999999 4556788899764 654 356789988
No 87
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.28 E-value=0.053 Score=31.56 Aligned_cols=34 Identities=26% Similarity=0.241 Sum_probs=26.2
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++ =-....|..|... |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQRV-HTGE-KPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGGG-GSCC-CCSCCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 599999999 4566788899754 6543 66789988
No 88
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.26 E-value=0.048 Score=31.77 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=26.4
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++ =-....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQKV-HTG-ERPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHTT-SCS-CCSSCCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHh-hCC-CCCCCCCCC
Confidence 599999999 4567889999765 654 356789988
No 89
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=93.21 E-value=0.067 Score=31.07 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=27.2
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCcc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICS 82 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVCa 82 (171)
.|.|+.|++. -....|..|... |.. .+.-.||+|-
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~cg 45 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRS-HDG-SVGKSGPSSG 45 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHH-HSC-CCCCCCCCCC
T ss_pred CCcCCCCCcccCCHHHHHHHHHH-ccC-CCCCCCcCCC
Confidence 5999999994 477889999865 544 4567899983
No 90
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.18 E-value=0.047 Score=31.77 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=26.2
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++ =-....|..|.. .|..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C 46 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRR-VHTGG-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTH-HHHSC-CCSCSCCC
T ss_pred CeECCcCCchhCCHHHHHHHHH-hcCCC-CCCCCCCC
Confidence 599999999 445678889975 56544 56789998
No 91
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.15 E-value=0.085 Score=30.63 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=26.7
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQVI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHHH-HHC-CSCCSCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 5567889999765 654 456789998
No 92
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=93.04 E-value=0.1 Score=38.97 Aligned_cols=52 Identities=21% Similarity=0.306 Sum_probs=31.3
Q ss_pred cccCC--CCCC-CCCHHHHHHhhhhhhcCCCCcccc--CCccccc--hhhHHhhhhhcc
Q 030808 46 DFPCP--YCYE-DFDIASLCSHLEDEHSCESKVTVC--PICSVKV--ARDMLSHITLQH 97 (171)
Q Consensus 46 ~F~CP--fC~e-~fD~~~L~~H~~eeH~~e~k~vVC--PVCaa~~--s~d~l~HL~~qH 97 (171)
.|.|+ .|+. =.+...|..|+...|....+.-+| ++|...- ..+|..|+...+
T Consensus 72 ~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~ 130 (190)
T 1tf6_A 72 NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT 130 (190)
T ss_dssp CEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGS
T ss_pred ceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhC
Confidence 46666 6766 445666667766666555555666 6675542 446666665544
No 93
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.98 E-value=0.078 Score=30.70 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=26.1
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++. -....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQR-VHMG-EKCSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHT-TTCC-SCSSCCSCC
T ss_pred CeECCCcCcccCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 5999999994 46788899975 4654 356789988
No 94
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=92.96 E-value=0.11 Score=33.22 Aligned_cols=47 Identities=23% Similarity=0.290 Sum_probs=36.9
Q ss_pred cccCCC--CCC-CCCHHHHHHhhhhhhcCCCCccccCC---ccccc--hhhHHhhhhhcc
Q 030808 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPI---CSVKV--ARDMLSHITLQH 97 (171)
Q Consensus 46 ~F~CPf--C~e-~fD~~~L~~H~~eeH~~e~k~vVCPV---Caa~~--s~d~l~HL~~qH 97 (171)
.|.||+ |++ --....|..|+...+. -.|++ |...- ..+|..|+...|
T Consensus 31 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 31 PYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHS-----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHHhCC-----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 599999 999 5578899999976554 68999 87653 568889987655
No 95
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=92.94 E-value=0.09 Score=30.64 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=26.2
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++ =-....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2el6_A 12 PYKCSQCEKSFSGKLRLLVHQRM-HTR-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHGG-GCC-SSCCSCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 4567889999654 654 356789988
No 96
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.91 E-value=0.09 Score=30.63 Aligned_cols=34 Identities=26% Similarity=0.238 Sum_probs=26.0
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|... |.. .++-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~~ 46 (46)
T 2em2_A 12 PFKCKECGKAFRQNIHLASHLRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCC-CCSSCSSCC
T ss_pred CEECCcCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4566889999764 644 356789886
No 97
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.89 E-value=0.079 Score=30.79 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=26.4
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHT-TTSS-SCCCSCCCC
T ss_pred CeeCcccCcccCChHHHHHHHH-HhCC-CCCCCCCCC
Confidence 599999999 556688999975 4654 356789988
No 98
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.89 E-value=0.076 Score=30.87 Aligned_cols=34 Identities=21% Similarity=0.250 Sum_probs=25.9
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++ =-....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~~ 46 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQK-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHT-TTTT-SCCCCTTCC
T ss_pred CeECCCCCchhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence 599999999 556678899976 4654 356789886
No 99
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=92.76 E-value=0.15 Score=33.07 Aligned_cols=35 Identities=20% Similarity=0.489 Sum_probs=14.7
Q ss_pred ccCCC--CCCC-CCHHHHHHhhhhhhcCCCCccccCCccc
Q 030808 47 FPCPY--CYED-FDIASLCSHLEDEHSCESKVTVCPICSV 83 (171)
Q Consensus 47 F~CPf--C~e~-fD~~~L~~H~~eeH~~e~k~vVCPVCaa 83 (171)
|.||+ |+.. -....|..|.. .|..+ +.-.|++|..
T Consensus 36 ~~C~~~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~ 73 (89)
T 2wbs_A 36 YHCDWDGCGWKFARSDELTRHYR-KHTGH-RPFQCQKCDR 73 (89)
T ss_dssp EECCSTTTCCEESSHHHHHHHHH-HHHCC-CCEECSSSSC
T ss_pred cCCCCCCCCCccCCHHHHHHHHH-HcCCC-CCccCCCCCc
Confidence 55543 5552 23444455543 23222 2344555543
No 100
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=92.76 E-value=0.1 Score=38.87 Aligned_cols=50 Identities=22% Similarity=0.427 Sum_probs=30.9
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhcc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH 97 (171)
.|.||+|+. =-+...|..|+...+. .+...|++|...- ..++..|+...+
T Consensus 49 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~ 101 (190)
T 2i13_A 49 PYKCPECGKSFSDKKDLTRHQRTHTG--EKPYKCPECGKSFSQRANLRAHQRTHT 101 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred CccCCCcCchhCCHHHHHHHHHhcCC--CCCccCcccCCccCCHHHHHHHHHhcC
Confidence 577777777 4456677777765443 3456777776542 446667766544
No 101
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.70 E-value=0.12 Score=30.05 Aligned_cols=34 Identities=26% Similarity=0.218 Sum_probs=26.2
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2yso_A 12 SHQCRECGEIFFQYVSLIEHQVL-HMG-QKNSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HSC-CSCCCTTCC
T ss_pred CEEccccChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999994 457889999765 643 456789988
No 102
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.68 E-value=0.072 Score=31.07 Aligned_cols=34 Identities=18% Similarity=0.123 Sum_probs=26.4
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+.|++ =-....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em8_A 12 PYKCVECGKGYKRRLDLDFHQRV-HTG-EKLSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HHC-CCCCCSCCC
T ss_pred CeECcccCchhCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 699999999 4556889999875 654 356789988
No 103
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.62 E-value=0.065 Score=31.16 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=25.9
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|++|++. -....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQR-VHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGG-GGSS-CCSSCSCCC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence 5999999994 45678889975 4654 356789988
No 104
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.42 E-value=0.04 Score=37.86 Aligned_cols=52 Identities=15% Similarity=0.233 Sum_probs=34.9
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhh-hcCCCCccccCCcccc----chhhHHhhhhhcc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDE-HSCESKVTVCPICSVK----VARDMLSHITLQH 97 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~ee-H~~e~k~vVCPVCaa~----~s~d~l~HL~~qH 97 (171)
.|.|+.|++ =-....|..|+... |..+.....|++|... -..++..|+...+
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~ 76 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC
T ss_pred CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC
Confidence 599999999 55678899998851 3333334459999753 2457777776543
No 105
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.23 E-value=0.063 Score=34.96 Aligned_cols=48 Identities=17% Similarity=0.515 Sum_probs=29.9
Q ss_pred CCCCCCcccCCCCCCCCCHH-H------HHHhhhhhhcCC-CCccccCCccccchh
Q 030808 40 EDDVRPDFPCPYCYEDFDIA-S------LCSHLEDEHSCE-SKVTVCPICSVKVAR 87 (171)
Q Consensus 40 ddd~r~~F~CPfC~e~fD~~-~------L~~H~~eeH~~e-~k~vVCPVCaa~~s~ 87 (171)
.++....+.||.|.+.+... . +|..|....... .....||+|...+..
T Consensus 14 ~~~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 14 VNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred HHhCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 34566789999999855532 1 123344444432 356789999887643
No 106
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.96 E-value=0.16 Score=34.46 Aligned_cols=50 Identities=20% Similarity=0.448 Sum_probs=38.3
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
.|.| .|++ =-+...|..|+.. |.. .+...|++|...- ..+|..|+...++
T Consensus 10 ~~~C-~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 62 (110)
T 2csh_A 10 LYPC-QCGKSFTHKSQRDRHMSM-HLG-LRPYGCGVCGKKFKMKHHLVGHMKIHTG 62 (110)
T ss_dssp CEEC-TTSCEESSHHHHHHHHHH-HSC-CCSEECTTTSCEESSSHHHHHHHTTTCC
T ss_pred CEec-cCCCccCCHHHHHHHHHH-cCC-CcCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 6999 9999 5568889999885 433 3567999998764 5689999876554
No 107
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.95 E-value=0.066 Score=36.77 Aligned_cols=54 Identities=15% Similarity=0.114 Sum_probs=39.6
Q ss_pred CCcccCCCCCCCC---CHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhcccc
Q 030808 44 RPDFPCPYCYEDF---DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (171)
Q Consensus 44 r~~F~CPfC~e~f---D~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~~ 99 (171)
+..+.|++|+..| ....|..|... |.. .++-.|++|...- ..+|..|+...|..
T Consensus 48 ~~~~~C~~C~~~f~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~hh~~ 106 (115)
T 2dmi_A 48 DNHETDNNNPKRWSKPRKRSLLEMEGK-EDA-QKVLKCMYCGHSFESLQDLSVHMIKTKHY 106 (115)
T ss_dssp SCCCCCCCCCSCCSSCCCCCCCCCCCS-CCC-CSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred CCCccCCCCCcccccccHHHHHHHhhc-cCC-CcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence 4456799999976 67788888755 543 3567999997763 56899998776643
No 108
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=91.84 E-value=0.16 Score=34.95 Aligned_cols=51 Identities=20% Similarity=0.389 Sum_probs=37.4
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCC--ccccc--hhhHHhhhhhccc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPV--Caa~~--s~d~l~HL~~qH~ 98 (171)
.|.|+.|++ --+...|..|+.. |.. .+.-.|++ |...- ..++..|+...++
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 89 (124)
T 1ubd_C 34 VHVCAECGKAFVESSKLKRHQLV-HTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89 (124)
T ss_dssp CEECTTTCCEESSHHHHHHHGGG-TSC-CCCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 699999999 4567889999874 433 35678987 97653 5678888876554
No 109
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=91.52 E-value=0.13 Score=30.37 Aligned_cols=37 Identities=27% Similarity=0.267 Sum_probs=28.2
Q ss_pred CCcccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCcc
Q 030808 44 RPDFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICS 82 (171)
Q Consensus 44 r~~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVCa 82 (171)
...|.|++|++. -....|..|... |.. .++-.|++|.
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C~ 47 (48)
T 2epr_A 10 RKQVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSSGPSS 47 (48)
T ss_dssp CCSEEETTTTEEESSHHHHHHHGGG-SCS-CCCCCSCCCC
T ss_pred CcCeeCCCCCcccCCHHHHHHHHHh-cCC-CCCccCCCCC
Confidence 346999999994 467889999764 544 3567899995
No 110
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=91.49 E-value=0.37 Score=31.74 Aligned_cols=50 Identities=18% Similarity=0.406 Sum_probs=37.4
Q ss_pred CcccCCC--CCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhc
Q 030808 45 PDFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQ 96 (171)
Q Consensus 45 ~~F~CPf--C~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~q 96 (171)
..|.||+ |++ --....|..|+.. |.. .+.-.|++|...- ..+|..|+...
T Consensus 44 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H 98 (100)
T 2ebt_A 44 KPYKCTWEGCDWRFARSDELTRHYRK-HTG-AKPFQCGVCNRSFSRSDHLALHMKRH 98 (100)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHH-HTS-CCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred CCeeCCCCCCCCccCCHHHHHHHHHH-hCC-CCCeECCCCcCccCCHHHHHHHHHHh
Confidence 3599986 999 5577889999865 443 3567899997753 56888888654
No 111
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=91.01 E-value=0.071 Score=39.04 Aligned_cols=46 Identities=30% Similarity=0.748 Sum_probs=32.6
Q ss_pred ccCCCcCCCCCC-CCCcccCCCCCC--CCCHHHHHHhhhhhhcCCCCccccCCccccc
Q 030808 31 RLSIDDFEVEDD-VRPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 31 ~~g~e~~~~ddd-~r~~F~CPfC~e--~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~ 85 (171)
.+.+||++-|++ ..-.|+|| ||. .++...|-. ..-.|.||-|+-.+
T Consensus 7 eV~LeDm~~de~~~~y~ypCr-CGd~F~IteedLe~--------ge~iv~C~sCSL~I 55 (89)
T 2jr7_A 7 EVEIEDFQYDEDSETYFYPCP-CGDNFSITKEDLEN--------GEDVATCPSCSLII 55 (89)
T ss_dssp EEETTTSEEETTTTEEEEECT-TSSEEEEEHHHHHH--------TCCEEECTTTCCEE
T ss_pred EEEHHHcEEcCCCCEEEEcCC-CCCEEEECHHHHhC--------CCEEEECCCCccEE
Confidence 355677665433 35689999 999 778888853 12368899999876
No 112
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=90.94 E-value=0.3 Score=35.00 Aligned_cols=51 Identities=24% Similarity=0.393 Sum_probs=38.5
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCC--ccccc--hhhHHhhhhhccc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPV--Caa~~--s~d~l~HL~~qH~ 98 (171)
.|.|++|++.| +...|..|+.. |.. .+.-.|++ |...- ..+|..|+...++
T Consensus 62 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~ 117 (155)
T 2rpc_A 62 WEECPREGKSFKAKYKLVNHIRV-HTG-EKPFPCPFPGCGKIFARSENLKIHKRTHTG 117 (155)
T ss_dssp BTTCTTSSCCCSSHHHHHHHTHH-HHC-CCSEECSCTTTCCEESCHHHHHHHHTTTCS
T ss_pred ccCCCCcccccCCHHHHHHHHHh-cCC-CCcccCCcCCCCCccCCHHHHHHHHHhhCC
Confidence 38999999944 67889999986 433 45678998 97763 5688999876554
No 113
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=90.91 E-value=0.097 Score=37.75 Aligned_cols=46 Identities=30% Similarity=0.743 Sum_probs=32.3
Q ss_pred ccCCCcCCCCCC-CCCcccCCCCCC--CCCHHHHHHhhhhhhcCCCCccccCCccccc
Q 030808 31 RLSIDDFEVEDD-VRPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 31 ~~g~e~~~~ddd-~r~~F~CPfC~e--~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~ 85 (171)
.+.+||++-|++ ..-.|+|| ||. .++...|.. ..-.|.||-|+-++
T Consensus 14 ev~LeDm~~de~~~~y~y~Cr-CGd~F~it~edL~~--------ge~iv~C~sCSL~I 62 (83)
T 1wge_A 14 EVEIEDFQYDEDSETYFYPCP-CGDNFAITKEDLEN--------GEDVATCPSCSLII 62 (83)
T ss_dssp EEEGGGSCCBTTTTEEEECCS-SSSCEEEEHHHHHT--------TCCEEECTTTCCEE
T ss_pred EEEHHHceEccCCCEEEEeCC-CCCEEEECHHHHhC--------CCEEEECCCCceEE
Confidence 355677765444 34589999 998 777777752 12368899999875
No 114
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=90.70 E-value=0.2 Score=36.91 Aligned_cols=52 Identities=27% Similarity=0.418 Sum_probs=40.9
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhcccc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~~ 99 (171)
.|.|++|++. -....|..|.. .|..+ ++-.|++|...- ..+|..|+...|+-
T Consensus 50 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 50 KYPCRYCEKVFPLAEYRTKHEI-HHTGE-RRYQCLACGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp CEECSSSSCEESSHHHHHHHHH-HHHTC-CCEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred CeeCCccCeecccccchhhhcc-ccCCC-ccccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence 5999999994 46788999975 57654 567999997753 66899999888853
No 115
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=90.34 E-value=0.2 Score=30.65 Aligned_cols=28 Identities=29% Similarity=0.508 Sum_probs=24.1
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCES 73 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~ 73 (171)
-|.||.|-+ =-+...|..|-+..|..+.
T Consensus 5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~~ 33 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELFKHYEAVHDAGN 33 (34)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHHTSSSC
T ss_pred ccCCcHHHHHcCCHHHHHHHHHhccccCC
Confidence 599999999 5678899999999998653
No 116
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=90.30 E-value=0.32 Score=31.36 Aligned_cols=52 Identities=23% Similarity=0.485 Sum_probs=37.8
Q ss_pred CCcccCCC--CCCCC-CHHHHHHhhhhhhcCCCCccccC--Cccccc--hhhHHhhhhhcc
Q 030808 44 RPDFPCPY--CYEDF-DIASLCSHLEDEHSCESKVTVCP--ICSVKV--ARDMLSHITLQH 97 (171)
Q Consensus 44 r~~F~CPf--C~e~f-D~~~L~~H~~eeH~~e~k~vVCP--VCaa~~--s~d~l~HL~~qH 97 (171)
...|.|++ |++.| ....|..|+.. |.. .+.-.|| +|...- ..++..|+...+
T Consensus 3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~ 61 (89)
T 2wbs_A 3 TATHTCDYAGCGKTYTKSSHLKAHLRT-HTG-EKPYHCDWDGCGWKFARSDELTRHYRKHT 61 (89)
T ss_dssp CCCEECCSTTTCCEESSHHHHHHHHTT-SCS-SCCEECCSTTTCCEESSHHHHHHHHHHHH
T ss_pred CCCeeCCCCCCCCcCCCHHHHHHHHHh-cCC-CCCcCCCCCCCCCccCCHHHHHHHHHHcC
Confidence 35799999 99944 67889999875 433 4567897 597653 567888886544
No 117
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=90.28 E-value=0.75 Score=28.85 Aligned_cols=50 Identities=20% Similarity=0.375 Sum_probs=36.3
Q ss_pred CCCcccCCC--CCC-CCCHHHHHHhhhhhhcCCCCccccCC--ccccc--hhhHHhhhh
Q 030808 43 VRPDFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHIT 94 (171)
Q Consensus 43 ~r~~F~CPf--C~e-~fD~~~L~~H~~eeH~~e~k~vVCPV--Caa~~--s~d~l~HL~ 94 (171)
....|.|++ |++ =-....|..|... |.. .+.-.|++ |...- ..+|..|+.
T Consensus 14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 14 RIRSHICSHPGCGKTYFKSSHLKAHTRT-HTG-EKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp CCCCEECSSTTTCCEESSHHHHHHHHHH-HSS-SCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred ccCceeCCCCCCccccCCHHHHHHHHHh-cCC-CCCccCCCCCCCcccCCHHHHHhHhh
Confidence 345799999 999 4467889999864 543 45678976 97763 557777764
No 118
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.20 E-value=0.34 Score=27.83 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=24.4
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++.| ....|..|... |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRI-HTGE-NPSGPSS 45 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGG-GSSS-CCCSSSC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 59999999955 56788899765 6544 5567775
No 119
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=90.06 E-value=0.34 Score=32.84 Aligned_cols=50 Identities=24% Similarity=0.509 Sum_probs=29.4
Q ss_pred cccCCC--CCC-CCCHHHHHHhhhhhhcCCCCccccC--Cccccc--hhhHHhhhhhcc
Q 030808 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCP--ICSVKV--ARDMLSHITLQH 97 (171)
Q Consensus 46 ~F~CPf--C~e-~fD~~~L~~H~~eeH~~e~k~vVCP--VCaa~~--s~d~l~HL~~qH 97 (171)
.|.|++ |++ =-+...|..|+.. |.. .+...|+ +|...- ..+|..|+...+
T Consensus 6 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~ 62 (119)
T 2jp9_A 6 PFMCAYPGCNKRYFKLSHLQMHSRK-HTG-EKPYQCDFKDCERRFSRSDQLKRHQRRHT 62 (119)
T ss_dssp CBCCCSTTSCCCBSCHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred eeeCCCCCCcchhCCHHHHHHHHHh-hCC-CCCccCCCCCCcCccCCHHHHHHHHHHcC
Confidence 477776 777 3456677777664 332 3345677 575542 456667766543
No 120
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.92 E-value=0.27 Score=28.39 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=24.5
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++ =-....|..|... |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~~ 45 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQHQKT-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCCC-CCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 599999999 4567788899865 6543 5567775
No 121
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=89.86 E-value=0.12 Score=32.70 Aligned_cols=35 Identities=20% Similarity=0.452 Sum_probs=25.7
Q ss_pred cccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCcccc
Q 030808 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (171)
Q Consensus 46 ~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~ 84 (171)
.|.||.|+..|....-.. ..|.. .++-.|++|...
T Consensus 14 ~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~ 48 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTE 48 (62)
T ss_dssp EEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCB
T ss_pred CccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCc
Confidence 599999999887655333 55654 467899999764
No 122
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=89.82 E-value=0.44 Score=32.29 Aligned_cols=51 Identities=22% Similarity=0.378 Sum_probs=38.7
Q ss_pred cccCC--CCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhccc
Q 030808 46 DFPCP--YCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 46 ~F~CP--fC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH~ 98 (171)
.|.|+ .|++ --+...|..|+.. |.. .+.-.|++|...- ..++..|+...++
T Consensus 36 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (119)
T 2jp9_A 36 PYQCDFKDCERRFSRSDQLKRHQRR-HTG-VKPFQCKTCQRKFSRSDHLKTHTRTHTG 91 (119)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHHHHHT
T ss_pred CccCCCCCCcCccCCHHHHHHHHHH-cCC-CCCccCCccCchhCCHHHHHHHHHHhcC
Confidence 59999 5999 5568899999886 433 4567899998763 5688899876543
No 123
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=89.60 E-value=0.078 Score=38.27 Aligned_cols=46 Identities=30% Similarity=0.767 Sum_probs=31.9
Q ss_pred ccCCCcCCCCCC-CCCcccCCCCCC--CCCHHHHHHhhhhhhcCCCCccccCCccccc
Q 030808 31 RLSIDDFEVEDD-VRPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 31 ~~g~e~~~~ddd-~r~~F~CPfC~e--~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~ 85 (171)
.+.+||++-|++ ..-.|+|| ||. .++...|.. ..-.|.||-|+-.+
T Consensus 7 ev~leDm~~de~~~~y~ypCr-CGd~F~it~edL~~--------ge~iv~C~sCSL~I 55 (83)
T 1yop_A 7 EIEIEDMTFEPENQMFTYPCP-CGDRFQIYLDDMFE--------GEKVAVCPSCSLMI 55 (83)
T ss_dssp CCBGGGSEEETTTTEEEEEET-TTEEEEEEHHHHHT--------TCCEEECSSSCCEE
T ss_pred EEEHHHcEEcCCCCEEEEeCC-CCCeEEECHHHHhC--------CCEEEECCCCccEE
Confidence 345666664443 34689999 999 777778842 12468899999875
No 124
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.14 E-value=0.48 Score=27.28 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=23.9
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++.| ....|..|.. .|..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSKLARHQR-VHTGE-KPSGPSS 45 (46)
T ss_dssp SSSCCSSCCCCSSHHHHHHHGG-GGCCC-CCCCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCCC-CCCCCCC
Confidence 59999999954 5677889975 46544 4566765
No 125
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.92 E-value=0.22 Score=30.79 Aligned_cols=41 Identities=17% Similarity=0.519 Sum_probs=23.1
Q ss_pred CCCCCcccCCCCCCCCCHHH-------HHHhhhhhhcCC-CCccccCCc
Q 030808 41 DDVRPDFPCPYCYEDFDIAS-------LCSHLEDEHSCE-SKVTVCPIC 81 (171)
Q Consensus 41 dd~r~~F~CPfC~e~fD~~~-------L~~H~~eeH~~e-~k~vVCPVC 81 (171)
++....+.||.|.+.+.... .+..|....... .+...||+|
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 10 ENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp SCSCCCCBCSSSCCBCSSCCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred hccccCCCCccCCcccCccEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 34566889999988554321 122344444322 245678887
No 126
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.84 E-value=0.14 Score=32.66 Aligned_cols=19 Identities=16% Similarity=0.625 Sum_probs=13.9
Q ss_pred CCCCCCCcccCCCCCCCCC
Q 030808 39 VEDDVRPDFPCPYCYEDFD 57 (171)
Q Consensus 39 ~ddd~r~~F~CPfC~e~fD 57 (171)
..++....+.||.|.+.+.
T Consensus 13 ~~~~~~~~~~C~IC~~~~~ 31 (63)
T 2ysj_A 13 FVNKLQEEVICPICLDILQ 31 (63)
T ss_dssp CCCCCCCCCBCTTTCSBCS
T ss_pred HHHhCccCCCCCcCCchhC
Confidence 3345677899999988554
No 127
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=88.46 E-value=0.27 Score=25.32 Aligned_cols=27 Identities=26% Similarity=0.509 Sum_probs=19.9
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCE 72 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e 72 (171)
.|.|+.|+..| ....|..|+...|..+
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~ 29 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRHAQKIHSGN 29 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred CcCCcccCcccCChHHHHHHHHHHccCC
Confidence 48899999955 5578888866666543
No 128
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=88.43 E-value=0.26 Score=34.24 Aligned_cols=29 Identities=31% Similarity=0.724 Sum_probs=25.4
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESK 74 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k 74 (171)
.|.|++|++ =.....|..|++..|..|.+
T Consensus 56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E~R 85 (85)
T 2lv2_A 56 VFPCKYCPATFYSSPGLTRHINKCHPSENR 85 (85)
T ss_dssp SEECTTSSCEESSHHHHHHHHHTTCTTCCC
T ss_pred ccCCCCCCCEeCCHHHHHHhCcccCcCCCC
Confidence 599999999 55788999999999998864
No 129
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.36 E-value=0.43 Score=27.50 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=23.8
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++. -....|..|... |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emi_A 12 HYECSECGKAFIQKSTLSMHQRI-HRGE-KPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG-GCSC-CCCSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHhH-hCCC-CCCCCCC
Confidence 5999999994 456888899664 6543 4566764
No 130
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.36 E-value=0.49 Score=27.21 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=23.9
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++.| ....|..|.. .|..+ ++-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~ 45 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQK-IHTGE-RPSGPSS 45 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHT-TTSCC-CCSCSCC
T ss_pred CEECCccCcccCCHHHHHHHHH-HhCCC-CCCCCCC
Confidence 59999999954 5678889976 46543 5567775
No 131
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.28 E-value=0.43 Score=27.39 Aligned_cols=33 Identities=27% Similarity=0.256 Sum_probs=24.3
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++ =-....|..|.. .|..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIHQA-THSGE-KPSGPSS 45 (46)
T ss_dssp CEECTTSCCEESSHHHHHHHHH-HHCCC-SCSCTTC
T ss_pred CeeccccCChhcCHHHHHHHHH-HcCCC-CCCCCCC
Confidence 599999999 456778889976 46543 5567775
No 132
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=88.22 E-value=0.48 Score=32.67 Aligned_cols=37 Identities=19% Similarity=0.225 Sum_probs=27.6
Q ss_pred CCCCcccCCCCC------------CCCCHHHHHHhhhhhhcCCCCccccCCccccc
Q 030808 42 DVRPDFPCPYCY------------EDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 42 d~r~~F~CPfC~------------e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~ 85 (171)
+....|.||.|. -.|+...+..++.. ...||+|....
T Consensus 10 ~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l 58 (85)
T 2kr4_A 10 DAPDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLN-------SPTDPFNRQML 58 (85)
T ss_dssp TCCTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-------CSBCTTTCCBC
T ss_pred cCchheECcccCchhcCCeECCCCCEECHHHHHHHHhc-------CCCCCCCcCCC
Confidence 456789999984 35777778888764 35899998765
No 133
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=88.01 E-value=0.66 Score=33.06 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=26.8
Q ss_pred CCCCCcccCCCCCC-------------CCCHHHHHHhhhhhhcCCCCccccCCccccc
Q 030808 41 DDVRPDFPCPYCYE-------------DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 41 dd~r~~F~CPfC~e-------------~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~ 85 (171)
.+....|.||.|.+ .|+...+..++.. ...||+|....
T Consensus 17 ~~~p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~-------~~~cP~~~~~l 67 (98)
T 1wgm_A 17 ADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-------DQTDPFNRSPL 67 (98)
T ss_dssp CSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT-------SCBCTTTCSBC
T ss_pred hcCcHhcCCcCccccccCCeECCCCCeEECHHHHHHHHHh-------CCCCCCCCCCC
Confidence 34567999999843 4666666666653 35899998865
No 134
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.99 E-value=0.5 Score=27.18 Aligned_cols=33 Identities=24% Similarity=0.328 Sum_probs=23.5
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++.| ....|..|.. .|..+ ++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRG-IHTGE-KPSGPSS 45 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHT-TTSCS-CCSSTTC
T ss_pred CeECCCCCcccCChhHHHHHhH-hcCCC-CCCCCCC
Confidence 59999999954 5677888964 46543 5567765
No 135
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.95 E-value=0.53 Score=27.06 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=23.6
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++. -....|..|.. .|..+ ++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRG-IHTGE-KPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHT-TTTTS-SCCCCSC
T ss_pred CeECCCCCcccCCHHHHHHHHH-hhCCC-CCCCCCC
Confidence 5999999994 45677888965 46543 5567765
No 136
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.93 E-value=0.61 Score=26.89 Aligned_cols=33 Identities=27% Similarity=0.311 Sum_probs=23.6
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|+.|++. -....|..|... |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGGG-GTTC-CCSSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHHh-cCCC-CCCCCCC
Confidence 5999999994 456788899754 6543 5566764
No 137
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=87.88 E-value=0.42 Score=27.60 Aligned_cols=33 Identities=24% Similarity=0.236 Sum_probs=24.1
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++ =-....|..|... |..+ ++-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH-HTTS-CSSSSCC
T ss_pred CEECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 599999999 4566788899764 6543 4567775
No 138
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=87.85 E-value=0.51 Score=35.06 Aligned_cols=52 Identities=19% Similarity=0.305 Sum_probs=39.8
Q ss_pred CcccC--CCCCC-CCCHHHHHHhhhhhhcCCCCccccCC--ccccc--hhhHHhhhhhccc
Q 030808 45 PDFPC--PYCYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHG 98 (171)
Q Consensus 45 ~~F~C--PfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPV--Caa~~--s~d~l~HL~~qH~ 98 (171)
..|.| +.|++ =-+...|..|+.. |.. .++-.||+ |...- ..+|..|+...++
T Consensus 103 ~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~ 161 (190)
T 1tf6_A 103 CVYVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161 (190)
T ss_dssp SCCEECSSSSCEECSSHHHHHHHHGG-GSS-SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred ceeeCCCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence 35999 77999 5578889999875 543 35678988 98763 5689999987666
No 139
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.84 E-value=0.51 Score=27.33 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=23.9
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|+.|++. -....|..|... |..+ +.-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHSV-HSGE-RPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTTT-TTSC-CSCTTSC
T ss_pred ccCCCCCCcccCcHHHHHHHHHh-cCCC-CCCCCCC
Confidence 5999999994 456778899754 6543 4567775
No 140
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.76 E-value=0.64 Score=26.81 Aligned_cols=34 Identities=29% Similarity=0.368 Sum_probs=24.2
Q ss_pred CcccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCC
Q 030808 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 45 ~~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
..|.|++|++.| ....|..|... |..+ ++-.|++
T Consensus 11 k~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2en9_A 11 KLFKCNECKKTFTQSSSLTVHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHH-HTSS-CCCSCCC
T ss_pred CCEECCccCcccCCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 359999999944 56788889764 6543 5567765
No 141
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.66 E-value=0.46 Score=27.25 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=24.1
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++. -....|..|... |..+ ++-.|||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-kp~~C~~ 45 (46)
T 2eor_A 12 PYNCEECGKAFIHDSQLQEHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-HHSC-CCSSSTT
T ss_pred CccCCCCCCCcCCHHHHHHHHHh-cCCC-CCCCCCC
Confidence 5999999994 456788899764 6543 4567775
No 142
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.50 E-value=0.11 Score=34.93 Aligned_cols=46 Identities=24% Similarity=0.470 Sum_probs=27.2
Q ss_pred CCCCCCCcccCCCCCCCCCHHHH--HHh-----hhhhhcCCCCccccCCccccch
Q 030808 39 VEDDVRPDFPCPYCYEDFDIASL--CSH-----LEDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 39 ~ddd~r~~F~CPfC~e~fD~~~L--~~H-----~~eeH~~e~k~vVCPVCaa~~s 86 (171)
.+++....+.||.|.+.+....+ |.| |...... +...||+|...+.
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 8 GSEEEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFR--ATPRCYICDQPTG 60 (81)
T ss_dssp CSSCCCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHH--HCSBCSSSCCBCC
T ss_pred CcccCCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHH--CCCcCCCcCcccc
Confidence 34456678999999885543211 222 3333321 2457999988764
No 143
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=87.14 E-value=0.083 Score=36.07 Aligned_cols=46 Identities=20% Similarity=0.447 Sum_probs=28.7
Q ss_pred CCCCCCcccCCCCCCCCCH-HHH--HHh-----hhhhhcCCCCccccCCccccc
Q 030808 40 EDDVRPDFPCPYCYEDFDI-ASL--CSH-----LEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 40 ddd~r~~F~CPfC~e~fD~-~~L--~~H-----~~eeH~~e~k~vVCPVCaa~~ 85 (171)
+++....|.||.|.+.|.. ..| |.| |...+-.......||+|....
T Consensus 7 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 7 DDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CCCCCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cccCCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 3456778999999884332 222 334 445554444557999998764
No 144
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=87.07 E-value=0.19 Score=33.16 Aligned_cols=46 Identities=13% Similarity=0.178 Sum_probs=27.0
Q ss_pred CCCCCCcccCCCCCCCCCHHH--HHHh-----hhhhhcCCCCccccCCccccch
Q 030808 40 EDDVRPDFPCPYCYEDFDIAS--LCSH-----LEDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 40 ddd~r~~F~CPfC~e~fD~~~--L~~H-----~~eeH~~e~k~vVCPVCaa~~s 86 (171)
+++....|.||.|.+-|.... -|.| |-..+-. .....||+|...+.
T Consensus 2 ~~~~~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~-~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 2 SPEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLD-AGHKTCPKSQETLL 54 (78)
T ss_dssp CCCCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHT-TTCCBCTTTCCBCS
T ss_pred CcCCcccCCCCCccccccCCEEcCCCCeecHHHHHHHHH-HCcCCCCCCcCCCC
Confidence 445677899999988443221 1222 3333332 23678999988753
No 145
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.97 E-value=0.63 Score=26.72 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=23.6
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++.| ....|..|.. .|..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQV-IHTGE-KPSGPSS 45 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHHT-TTCCS-CCSSCCC
T ss_pred CeECCcCChhhCCHHHHHHHHH-HhCCC-CCCCCCC
Confidence 59999999955 5678888976 46443 4556764
No 146
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=86.49 E-value=0.54 Score=29.79 Aligned_cols=36 Identities=25% Similarity=0.392 Sum_probs=28.2
Q ss_pred cccCCC--CCC-CCCHHHHHHhhhhhhcCCCCccccCCccc
Q 030808 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPICSV 83 (171)
Q Consensus 46 ~F~CPf--C~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa 83 (171)
.|.|++ |++ =-....|..|+.. |..+ +.-.|++|..
T Consensus 38 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C~k 76 (79)
T 2dlk_A 38 SFSCPEPACGKSFNFKKHLKEHMKL-HSDT-RDYICEFSGP 76 (79)
T ss_dssp CEECSCTTTCCEESSHHHHHHHHHH-HHTS-CCCSCCSSSC
T ss_pred CeECCCCCCcCccCCHHHHHHHHHH-hCCC-CCeeCCCCCC
Confidence 599999 999 4567889999974 5543 5678999964
No 147
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=86.46 E-value=1.5 Score=28.62 Aligned_cols=46 Identities=22% Similarity=0.467 Sum_probs=27.4
Q ss_pred CCCCcccCCCCCCCCCHHH--HHHh-----hhhhhcCC----CCccccCCccccchh
Q 030808 42 DVRPDFPCPYCYEDFDIAS--LCSH-----LEDEHSCE----SKVTVCPICSVKVAR 87 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~--L~~H-----~~eeH~~e----~k~vVCPVCaa~~s~ 87 (171)
+....+.||.|.+.+.... -|.| |...+... .....||+|...+..
T Consensus 15 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 15 MIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CCCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred hCccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 4566899999988554321 1222 33333222 347889999887643
No 148
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.38 E-value=0.53 Score=27.15 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=24.1
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++ =-....|..|.. .|.. .++-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQR-IHTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHT-TTSC-CCCCSSCC
T ss_pred CeECCcCCcccCCHHHHHHHHH-HhCC-CCCCCCCC
Confidence 599999999 456788899976 4654 35567764
No 149
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.98 E-value=0.67 Score=26.52 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=24.0
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++ =-....|..|.. .|..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~p~~C~~ 45 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRR-IHTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGG-GTSSC-CSSCCCC
T ss_pred CEECCCCChhhCChHHHHHHHH-hcCCC-CCcCCCC
Confidence 599999999 456778889975 56543 4567765
No 150
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=85.59 E-value=0.66 Score=23.43 Aligned_cols=24 Identities=29% Similarity=0.703 Sum_probs=17.8
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhh
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEH 69 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH 69 (171)
.|.|+.|+..| ....|..|....|
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~h~ 26 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKTHIKTKH 26 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred CccCCCCCCccCCHHHHHHHHHHHc
Confidence 48899999955 5578888876544
No 151
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=85.49 E-value=0.9 Score=22.87 Aligned_cols=24 Identities=29% Similarity=0.629 Sum_probs=17.7
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHS 70 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~ 70 (171)
.|.|+.|++.| ....|..|... |.
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~-h~ 26 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHLKRHYRS-HT 26 (29)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-HS
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hc
Confidence 48999999955 56778888764 43
No 152
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=85.39 E-value=0.75 Score=25.78 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=21.9
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccC
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCP 79 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCP 79 (171)
.|.|++|++. -....|..|... |..+ ++-.||
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 42 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQRT-HAGE-SGPSSG 42 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GCCC-CSCCCC
T ss_pred CccCCCcChhhCCHHHHHHHHHh-cCCC-CCCCCC
Confidence 5999999994 456778888754 5543 444554
No 153
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=85.33 E-value=0.91 Score=32.44 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=26.3
Q ss_pred CCCCcccCCCCCC------------CCCHHHHHHhhhhhhcCCCCccccCCccccc
Q 030808 42 DVRPDFPCPYCYE------------DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 42 d~r~~F~CPfC~e------------~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~ 85 (171)
+....|.||.|.+ .|+...+..++.. ...||+|....
T Consensus 25 ~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l 73 (100)
T 2kre_A 25 DAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN-------SPTDPFNRQTL 73 (100)
T ss_dssp SCSTTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS-------CSBCSSSCCBC
T ss_pred cCcHhhCCcCccCcccCCeECCCCCEEchHHHHHHHHc-------CCCCCCCCCCC
Confidence 4567999999844 4566666666652 36899998764
No 154
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=85.08 E-value=0.55 Score=28.35 Aligned_cols=28 Identities=25% Similarity=0.389 Sum_probs=23.3
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCES 73 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~ 73 (171)
.|.||+|+. --....|..|+...|..+.
T Consensus 30 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 30 PYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred CccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence 699999999 4467899999988887653
No 155
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.94 E-value=0.56 Score=27.06 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=23.7
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++ =-....|..|... |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~ 45 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQHLRV-HTQE-TLSGPSS 45 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHHHH-HSSC-CSSSCCC
T ss_pred CeECcccChhhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 599999999 5567788899764 6543 4556764
No 156
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.91 E-value=1.1 Score=25.89 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=23.5
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++.| ....|..|... |..+ ++-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eom_A 12 GHRCSDCGKFFLQASNFIQHRRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HSSC-CCSSCCC
T ss_pred CcCCCCCCCeeCChHHHHHHHHH-hCCC-CCCCCCC
Confidence 59999999955 56788899764 6543 4556654
No 157
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.71 E-value=1.1 Score=25.61 Aligned_cols=33 Identities=24% Similarity=0.176 Sum_probs=23.7
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|+.|++. -....|..|... |.. .++-.|+|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 43 (43)
T 2yrm_A 10 AFFCNECDCRFSEEASLKRHTLQ-THS-DKSGPSSG 43 (43)
T ss_dssp CBCCSSSCCCBSSHHHHHHHHHH-HTC-TTCSSSCC
T ss_pred CEECCCCCCeeCChHHHHHHHHh-hCC-CCCccCCC
Confidence 5999999995 456788889765 543 34566765
No 158
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=84.65 E-value=0.72 Score=35.11 Aligned_cols=32 Identities=25% Similarity=0.378 Sum_probs=27.3
Q ss_pred CCcccCCCCCC-CCCHHHHHHhhhhhhcCCCCc
Q 030808 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKV 75 (171)
Q Consensus 44 r~~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~ 75 (171)
...+.|=||.+ --+...+..||.+.|.++-..
T Consensus 13 ~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~ 45 (121)
T 1wir_A 13 RQHTPCLFCDRLFASAEETFSHCKLEHQFNIDS 45 (121)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHSSCCCHHH
T ss_pred CCceeEecCCCcccCHHHHHHHHHHhcCCCHHH
Confidence 35699999999 678999999999999987544
No 159
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=84.51 E-value=0.44 Score=32.81 Aligned_cols=44 Identities=20% Similarity=0.540 Sum_probs=27.4
Q ss_pred CCCcccCCCCCCCCCHHHH------HHh-----hhhhhcCCCCccccCCccccchh
Q 030808 43 VRPDFPCPYCYEDFDIASL------CSH-----LEDEHSCESKVTVCPICSVKVAR 87 (171)
Q Consensus 43 ~r~~F~CPfC~e~fD~~~L------~~H-----~~eeH~~e~k~vVCPVCaa~~s~ 87 (171)
....+.||.|-+.++.... |-| |-.... +..+..||+|...+..
T Consensus 8 ~~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~-~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 8 KEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIR-TDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHT-TSSCSBCTTTCCBCSS
T ss_pred cccCCcCCccCccCccccccccccCCCCCcCHHHHHHHH-hcCCCCCCCCCCccCC
Confidence 3457899999997754311 333 333332 2346789999987643
No 160
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.41 E-value=1 Score=25.88 Aligned_cols=33 Identities=24% Similarity=0.401 Sum_probs=23.6
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|+.|++.| ....|..|.. .|..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQR-VHTGE-KPSGPSS 45 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHT-TTSSS-CCCCTTC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCCC-CCCCCCC
Confidence 59999999955 5678889965 56543 4566764
No 161
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.31 E-value=0.84 Score=26.08 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=23.8
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++ =-....|..|... |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQRT-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT-SCSS-SSSCCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 599999999 4567788899754 6543 4556765
No 162
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=84.30 E-value=0.26 Score=32.36 Aligned_cols=46 Identities=24% Similarity=0.570 Sum_probs=27.5
Q ss_pred CCCCcccCCCCCCCCCHHH-------HHHhhhhhhcCC-----CCccccCCccccchh
Q 030808 42 DVRPDFPCPYCYEDFDIAS-------LCSHLEDEHSCE-----SKVTVCPICSVKVAR 87 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~-------L~~H~~eeH~~e-----~k~vVCPVCaa~~s~ 87 (171)
+....+.||.|.+.|.... +|..|...+-.. .....||+|...+..
T Consensus 8 ~~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 8 NVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred hcccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 4566899999987444321 123344443332 236789999887653
No 163
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=84.22 E-value=1.9 Score=28.35 Aligned_cols=46 Identities=26% Similarity=0.483 Sum_probs=33.9
Q ss_pred CCCCC-CHHHHHHhhhhhhcCCC-----CccccC--Ccccc--chhhHHhhhhhcc
Q 030808 52 CYEDF-DIASLCSHLEDEHSCES-----KVTVCP--ICSVK--VARDMLSHITLQH 97 (171)
Q Consensus 52 C~e~f-D~~~L~~H~~eeH~~e~-----k~vVCP--VCaa~--~s~d~l~HL~~qH 97 (171)
|++.| +..+|+.|+..+|.... .+.+|. -|... ....|+.||...|
T Consensus 9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 77744 56779999999998654 357786 67654 3567999998776
No 164
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=84.17 E-value=0.6 Score=29.80 Aligned_cols=29 Identities=31% Similarity=0.554 Sum_probs=24.4
Q ss_pred CcccCCCCCCC-CCHHHHHHhhhhhhcCCC
Q 030808 45 PDFPCPYCYED-FDIASLCSHLEDEHSCES 73 (171)
Q Consensus 45 ~~F~CPfC~e~-fD~~~L~~H~~eeH~~e~ 73 (171)
..|.||+|++. -....|..|+...|..+.
T Consensus 44 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 73 (77)
T 2ct1_A 44 AKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73 (77)
T ss_dssp SSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred CccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence 46999999994 468899999999998754
No 165
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.10 E-value=0.88 Score=26.17 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=23.8
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++. -....|..|.. .|.. .++-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2em4_A 12 PYECIECGKAFKTKSSLICHRR-SHTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HHSS-SSCCCCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHH-hcCC-CCCCCCCC
Confidence 5999999994 45678889976 4654 35567775
No 166
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.94 E-value=0.26 Score=32.37 Aligned_cols=47 Identities=23% Similarity=0.612 Sum_probs=26.8
Q ss_pred CCCCCcccCCCCCCCCCHHH-H-HHh-----hhhhhcC----CCCccccCCccccchh
Q 030808 41 DDVRPDFPCPYCYEDFDIAS-L-CSH-----LEDEHSC----ESKVTVCPICSVKVAR 87 (171)
Q Consensus 41 dd~r~~F~CPfC~e~fD~~~-L-~~H-----~~eeH~~----e~k~vVCPVCaa~~s~ 87 (171)
++....+.||.|.+.+.... | |.| |...+.. +.....||+|...+..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 14 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred HHccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 34566899999988554321 1 222 2222221 2346789999887653
No 167
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=83.89 E-value=0.88 Score=36.41 Aligned_cols=40 Identities=10% Similarity=0.178 Sum_probs=29.5
Q ss_pred CCCCCCcccCCCCC------------CCCCHHHHHHhhhhhhcCCCCccccCCccccc
Q 030808 40 EDDVRPDFPCPYCY------------EDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 40 ddd~r~~F~CPfC~------------e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~ 85 (171)
+.+.+..|.||.|. -.|+...+..|+...+ . .||+|....
T Consensus 100 ~~~ip~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~-----~-tcP~t~~~l 151 (179)
T 2f42_A 100 KREIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVG-----H-FDPVTRSPL 151 (179)
T ss_dssp CCCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTC-----S-BCTTTCCBC
T ss_pred ccCCcHhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCC-----C-CCCCCcCCC
Confidence 34567899999974 4678888888887631 1 699998764
No 168
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.67 E-value=0.99 Score=25.42 Aligned_cols=32 Identities=19% Similarity=0.267 Sum_probs=22.3
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCP 79 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCP 79 (171)
.|.|++|++ =-....|..|... |..+ +.-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRT-HTGE-SGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHH-TTTS-SCSCCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-hCCC-CCCCCC
Confidence 599999999 4567788899764 6543 344554
No 169
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.07 E-value=0.67 Score=26.70 Aligned_cols=34 Identities=24% Similarity=0.245 Sum_probs=23.6
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|+.|++.| ....|..|.. .|....++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~~C~~ 46 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHER-IHTRGVKSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHT-TCCSCCTTSSSCC
T ss_pred CEECcCCCCcCCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence 59999999944 5578888974 4654235566764
No 170
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.79 E-value=0.99 Score=25.77 Aligned_cols=33 Identities=24% Similarity=0.251 Sum_probs=23.4
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++ =-....|..|.. .|..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQR-IHTGE-KPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHT-TTSSC-CSSCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHH-HcCCC-CCCCCCC
Confidence 599999999 445678888975 46443 4556764
No 171
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.37 E-value=1.4 Score=25.28 Aligned_cols=32 Identities=25% Similarity=0.473 Sum_probs=22.6
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCP 79 (171)
.|.|++|++.| ....|..|... |..+ +.-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2eoh_A 12 PYECKECRKTFIQIGHLNQHKRV-HTGE-RSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-CSSC-CSCSTT
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 59999999954 56788889754 6543 455665
No 172
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.68 E-value=1.5 Score=24.61 Aligned_cols=32 Identities=19% Similarity=0.240 Sum_probs=21.7
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccC
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCP 79 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCP 79 (171)
.|.|++|++. -....|..|.. .|..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~ 44 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTR-THTGE-SGPSSG 44 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHT-TTCCS-SSSCCC
T ss_pred CeECCCCCCccCCHHHHHHHhh-hcCCC-CCCCCC
Confidence 5999999994 45677888875 46443 344453
No 173
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.59 E-value=1.8 Score=23.99 Aligned_cols=31 Identities=26% Similarity=0.504 Sum_probs=21.2
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCcccc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVC 78 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVC 78 (171)
.|.|+.|++.| ....|..|... |..+ ++-.|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C 41 (42)
T 2yte_A 10 PYSCAECKETFSDNNRLVQHQKM-HTVK-SGPSS 41 (42)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH-TSCC-SSCCC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-hCCC-CCCCC
Confidence 59999999944 56778888764 6543 33344
No 174
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.50 E-value=1.6 Score=25.01 Aligned_cols=33 Identities=33% Similarity=0.449 Sum_probs=22.9
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++.| ....|..|... |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emz_A 12 PFKCNECGKGFGRRSHLAGHLRL-HSRE-KSSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HHHT-TCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 59999999944 56778889764 5433 4456664
No 175
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.02 E-value=0.49 Score=25.87 Aligned_cols=22 Identities=32% Similarity=0.587 Sum_probs=17.8
Q ss_pred cccCCCCCCCCCH--HHHHHhhhh
Q 030808 46 DFPCPYCYEDFDI--ASLCSHLED 67 (171)
Q Consensus 46 ~F~CPfC~e~fD~--~~L~~H~~e 67 (171)
.|.|++|+..|.. ..|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CEECSSSSCEECSSCHHHHHHHHH
T ss_pred CeECCCCChhhccCHHHHHHHHHh
Confidence 5999999997666 588899753
No 176
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.88 E-value=1.3 Score=25.38 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=22.4
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccC
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCP 79 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCP 79 (171)
.|.|++|++. -....|..|... |..+ ++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIHQQS-HTGE-RHSGPS 44 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTCC-CBTTTB
T ss_pred CEECcccCCccCCHhHHHHHHHH-cCCC-CCCCCC
Confidence 5999999994 456788889754 6543 445564
No 177
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=80.84 E-value=1.2 Score=28.32 Aligned_cols=37 Identities=11% Similarity=0.128 Sum_probs=28.4
Q ss_pred CcccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccc
Q 030808 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV 83 (171)
Q Consensus 45 ~~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa 83 (171)
..|.|+.|++ --....|..|....|. .+...|++|..
T Consensus 46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~--~~~~~~~~~~~ 83 (86)
T 1x6h_A 46 AAFVCSKCGKTFTRRNTMARHADNCAG--PDGVEGENSGP 83 (86)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHHCCC--CCSCCCCCCCC
T ss_pred cceECCCCCChhCCHHHHHHHHHHccC--CCCcccCCCCC
Confidence 4699999999 4478899999877655 34567888854
No 178
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.74 E-value=1.5 Score=25.12 Aligned_cols=34 Identities=24% Similarity=0.147 Sum_probs=25.7
Q ss_pred cccCC--CCCC-CCCHHHHHHhhhhhhcCCCCccccCCc
Q 030808 46 DFPCP--YCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (171)
Q Consensus 46 ~F~CP--fC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVC 81 (171)
.|.|+ .|++ =.....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 48 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRS-HSG-VKPSGPSSG 48 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTT-SCC-CCSCSSCCC
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59997 8999 4567889999765 554 456789988
No 179
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=80.55 E-value=0.73 Score=34.87 Aligned_cols=47 Identities=28% Similarity=0.567 Sum_probs=26.1
Q ss_pred cccCC--CCCCCCCHHHHHHhhhhhhcCCCCccccCCccccc-hhhHHhhhhh
Q 030808 46 DFPCP--YCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV-ARDMLSHITL 95 (171)
Q Consensus 46 ~F~CP--fC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~-s~d~l~HL~~ 95 (171)
...|| -|.+.+....|..|.. . =+-+.+.||-|...+ ..++..|+..
T Consensus 82 ~v~C~n~GC~~~~~~~~l~~H~~--~-C~~~~v~C~~C~~~~~r~~l~~H~~~ 131 (170)
T 3hcs_A 82 MVKCPNEGCLHKMELRHLEDHQA--H-CEFALMDCPQCQRPFQKFHINIHILK 131 (170)
T ss_dssp EEECCSTTCCCEEEGGGHHHHHT--T-CTTSEEECTTTCCEEEGGGHHHHHHH
T ss_pred ccCCCCCCCCceecHhHHHHHHh--c-CCceeeECCCCChHHHHHHHHHHhhh
Confidence 35665 3666666666666642 1 122456677776643 4566666643
No 180
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=80.54 E-value=0.32 Score=32.21 Aligned_cols=45 Identities=22% Similarity=0.495 Sum_probs=26.2
Q ss_pred CCCCCCcccCCCCCCCCCHH-HH--HHh-----hhhhhcCCCCccccCCcccc
Q 030808 40 EDDVRPDFPCPYCYEDFDIA-SL--CSH-----LEDEHSCESKVTVCPICSVK 84 (171)
Q Consensus 40 ddd~r~~F~CPfC~e~fD~~-~L--~~H-----~~eeH~~e~k~vVCPVCaa~ 84 (171)
.++....+.||.|.+.|... .| |.| |....-.......||+|...
T Consensus 9 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 9 DDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp CCCSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred cccCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 34566789999998854432 12 223 33333322334689999875
No 181
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.49 E-value=0.96 Score=25.88 Aligned_cols=33 Identities=24% Similarity=0.327 Sum_probs=23.3
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCC
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPV 80 (171)
.|.|++|++. -....|..|.. .|..+ +.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~~-k~~~C~~ 45 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQR-IHTGE-KSGPSSG 45 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHT-TTSSC-CCCCSCC
T ss_pred CccCCCCCCccCChHHHHHHHH-HhCCC-CCCCCCC
Confidence 5999999994 45677888965 46543 4566764
No 182
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=80.48 E-value=1 Score=22.51 Aligned_cols=22 Identities=23% Similarity=0.353 Sum_probs=16.9
Q ss_pred cccCCCCCCC-CCHHHHHHhhhh
Q 030808 46 DFPCPYCYED-FDIASLCSHLED 67 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~e 67 (171)
.|.|+.|++. .....|..|...
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLRI 24 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHHH
Confidence 4789999994 467788888754
No 183
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=79.95 E-value=1 Score=26.74 Aligned_cols=30 Identities=20% Similarity=0.366 Sum_probs=19.1
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCc
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKV 75 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~ 75 (171)
-|.|++|++ -.....|..|+...|..+...
T Consensus 7 p~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~ 37 (48)
T 3iuf_A 7 PYACDICGKRYKNRPGLSYHYAHSHLAEEEG 37 (48)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred CEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence 488888888 445677888877567665443
No 184
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=79.85 E-value=0.98 Score=26.79 Aligned_cols=24 Identities=33% Similarity=0.620 Sum_probs=20.3
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhh
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEH 69 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH 69 (171)
.|.||+|+. --....|..|+...|
T Consensus 32 ~~~C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 32 PYKCEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHHC
T ss_pred CcCCCCCcchhCCHHHHHHHHHHhc
Confidence 499999999 457888999998776
No 185
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.78 E-value=1.5 Score=25.14 Aligned_cols=32 Identities=34% Similarity=0.483 Sum_probs=22.2
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCP 79 (171)
.|.|+.|++.| ....|..|... |..+ +.-.|+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQRV-HSGE-KPSGPS 44 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGGG-SCCS-CCCCCC
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 59999999955 45778888764 5443 445665
No 186
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.78 E-value=2.3 Score=28.05 Aligned_cols=46 Identities=26% Similarity=0.556 Sum_probs=27.1
Q ss_pred CCCCcccCCCCCCCCCHHH-----H-HH-----hhhhhhcCC-CCccccCCccccchh
Q 030808 42 DVRPDFPCPYCYEDFDIAS-----L-CS-----HLEDEHSCE-SKVTVCPICSVKVAR 87 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~-----L-~~-----H~~eeH~~e-~k~vVCPVCaa~~s~ 87 (171)
+....+.||.|.+.|+... | |. .|....... .....||+|...+..
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 11 ALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp CCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred hccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 4556799999999766511 1 22 233322211 245789999887644
No 187
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.65 E-value=1.3 Score=28.13 Aligned_cols=30 Identities=23% Similarity=0.403 Sum_probs=24.6
Q ss_pred CcccCCCCCC-CCCHHHHHHhhhhhhcCCCC
Q 030808 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESK 74 (171)
Q Consensus 45 ~~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k 74 (171)
..|.|++|++ =-....|..|+...|..+..
T Consensus 37 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~ 67 (78)
T 2d9h_A 37 LRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67 (78)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred cccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence 3699999999 44678999999999987543
No 188
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=79.59 E-value=0.84 Score=31.87 Aligned_cols=30 Identities=23% Similarity=0.460 Sum_probs=23.7
Q ss_pred CccccCCccccc-----hhhHHhhhhhcccchhhh
Q 030808 74 KVTVCPICSVKV-----ARDMLSHITLQHGHLFKL 103 (171)
Q Consensus 74 k~vVCPVCaa~~-----s~d~l~HL~~qH~~~~k~ 103 (171)
..++|.+|-..+ +.||.+||...|...|..
T Consensus 28 ~~a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~e~~~ 62 (73)
T 2ct5_A 28 KKIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCE 62 (73)
T ss_dssp SCCEETTTTEECCCCSSTHHHHHHHHHSCHHHHHH
T ss_pred CEEECCCCCccccCCCChHhHHHHHHHHCHHHHHH
Confidence 467777776654 679999999999888865
No 189
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=79.27 E-value=0.74 Score=33.19 Aligned_cols=38 Identities=18% Similarity=0.650 Sum_probs=23.7
Q ss_pred CCCCcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCcccc
Q 030808 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~ 84 (171)
.+...|.||||+-+=. -.+..+.....-.+.|-+|-..
T Consensus 19 ~L~t~F~CPfCnh~~s-----V~vkidk~~~~g~l~C~~Cg~~ 56 (85)
T 1wii_A 19 TLETQFTCPFCNHEKS-----CDVKMDRARNTGVISCTVCLEE 56 (85)
T ss_dssp CCSSCCCCTTTCCSSC-----EEEEEETTTTEEEEEESSSCCE
T ss_pred CCCCeEcCCCCCCCCe-----EEEEEEccCCEEEEEcccCCCe
Confidence 4567999999987311 1122333333456889999875
No 190
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=79.21 E-value=1.2 Score=27.30 Aligned_cols=26 Identities=23% Similarity=0.793 Sum_probs=21.5
Q ss_pred CcccCCCCCCC-CCHHHHHHhhhhhhc
Q 030808 45 PDFPCPYCYED-FDIASLCSHLEDEHS 70 (171)
Q Consensus 45 ~~F~CPfC~e~-fD~~~L~~H~~eeH~ 70 (171)
..|.||+|++. -....|..|....|.
T Consensus 39 ~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 39 KVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 36999999994 467889999988774
No 191
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.18 E-value=0.46 Score=30.11 Aligned_cols=42 Identities=21% Similarity=0.589 Sum_probs=24.6
Q ss_pred CCCCcccCCCCCCCCCHHH---------HHHh-----hhhhhcCCCCccccCCccccc
Q 030808 42 DVRPDFPCPYCYEDFDIAS---------LCSH-----LEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~---------L~~H-----~~eeH~~e~k~vVCPVCaa~~ 85 (171)
.....+.||.|.+.+.... -|.| |...... +...||+|...+
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~~ 66 (69)
T 2ea6_A 11 RPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--NANTCPTCRKKI 66 (69)
T ss_dssp CTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHH--HCSSCTTTCCCC
T ss_pred CCCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHH--cCCCCCCCCCcc
Confidence 3456789999999776531 1333 2222221 134799998765
No 192
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=78.72 E-value=1.3 Score=22.09 Aligned_cols=22 Identities=32% Similarity=0.779 Sum_probs=16.3
Q ss_pred cccCCCCCCCC-CHHHHHHhhhh
Q 030808 46 DFPCPYCYEDF-DIASLCSHLED 67 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~e 67 (171)
.|.|+.|++.| ....|..|...
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVGNLKAHLKI 24 (29)
T ss_dssp CCCCSSCCCCCCTTTHHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHHH
Confidence 47899999955 45678888754
No 193
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=78.34 E-value=1.9 Score=34.01 Aligned_cols=39 Identities=15% Similarity=0.261 Sum_probs=25.4
Q ss_pred CCCCcccCCCCCC------------CCCHHHHHHhhhhhhcCCCCccccCCccccch
Q 030808 42 DVRPDFPCPYCYE------------DFDIASLCSHLEDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 42 d~r~~F~CPfC~e------------~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~s 86 (171)
+....|.||.|.+ .|+...+..++... ...||+|...++
T Consensus 204 ~~~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~------~~~cP~~~~~~~ 254 (281)
T 2c2l_A 204 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRV------GHFNPVTRSPLT 254 (281)
T ss_dssp CCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHT------CSSCTTTCCCCC
T ss_pred CCCcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHC------CCCCcCCCCCCc
Confidence 4567899999855 34455666666542 123999988753
No 194
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=78.33 E-value=1.1 Score=22.57 Aligned_cols=22 Identities=32% Similarity=0.626 Sum_probs=15.9
Q ss_pred cccCCCCCCCC-CHHHHHHhhhh
Q 030808 46 DFPCPYCYEDF-DIASLCSHLED 67 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~e 67 (171)
.|.|+.|++.| ....|..|...
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 1rik_A 2 KFACPECPKRFMRSDHLTLHILL 24 (29)
T ss_dssp CEECSSSSCEESCSHHHHHHHTG
T ss_pred CccCCCCCchhCCHHHHHHHHHH
Confidence 37899999844 56777788754
No 195
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.27 E-value=0.47 Score=31.02 Aligned_cols=45 Identities=22% Similarity=0.510 Sum_probs=27.6
Q ss_pred CCCCCcccCCCCCCCCC-HHHH--HHh-----hhhhhcCCCCccccCCccccchh
Q 030808 41 DDVRPDFPCPYCYEDFD-IASL--CSH-----LEDEHSCESKVTVCPICSVKVAR 87 (171)
Q Consensus 41 dd~r~~F~CPfC~e~fD-~~~L--~~H-----~~eeH~~e~k~vVCPVCaa~~s~ 87 (171)
++....+.||.|.+.+. ...| |.| |....-.. ...||+|...+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~--~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 10 SELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY--SNRCPKCNIVVHQ 62 (72)
T ss_dssp CCCCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHH--CSSCTTTCCCCCS
T ss_pred hhcCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHc--CCcCCCcCcccCc
Confidence 35567899999988554 2222 333 44433321 4589999887643
No 196
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.01 E-value=1.3 Score=23.87 Aligned_cols=25 Identities=36% Similarity=0.510 Sum_probs=18.9
Q ss_pred CcccCCCCCCC-CCHHHHHHhhhhhhc
Q 030808 45 PDFPCPYCYED-FDIASLCSHLEDEHS 70 (171)
Q Consensus 45 ~~F~CPfC~e~-fD~~~L~~H~~eeH~ 70 (171)
..|.|++|++. -....|..|... |.
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~-H~ 33 (36)
T 2els_A 8 KIFTCEYCNKVFKFKHSLQAHLRI-HT 33 (36)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH-HC
T ss_pred CCEECCCCCceeCCHHHHHHHHHH-hC
Confidence 36999999994 466788888764 43
No 197
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.01 E-value=0.71 Score=30.03 Aligned_cols=42 Identities=29% Similarity=0.580 Sum_probs=23.6
Q ss_pred CCCCcccCCCCCCCCCHHH-----HHHh-----hhhhhcCCCCccccCCccccc
Q 030808 42 DVRPDFPCPYCYEDFDIAS-----LCSH-----LEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~-----L~~H-----~~eeH~~e~k~vVCPVCaa~~ 85 (171)
+......||.|.+.|.... -|.| |...... +...||+|...+
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~--~~~~CP~Cr~~~ 62 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLE--VRKVCPLCNMPV 62 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHH--HCSBCTTTCCBC
T ss_pred cCCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHH--cCCcCCCcCccc
Confidence 3445678999988664321 1333 2322221 123899998765
No 198
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.83 E-value=1.4 Score=24.28 Aligned_cols=25 Identities=24% Similarity=0.356 Sum_probs=19.5
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHS 70 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~ 70 (171)
.|.|+.|++.| ....|..|....|.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred CeECCCCCcccCCHHHHHHHHHHHcc
Confidence 59999999954 67888999555664
No 199
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=77.55 E-value=0.5 Score=31.11 Aligned_cols=44 Identities=27% Similarity=0.724 Sum_probs=26.6
Q ss_pred CCCCCcccCCCCCCCCCHHH-----HHHhh-----hhhhcCCCCccccCCccccch
Q 030808 41 DDVRPDFPCPYCYEDFDIAS-----LCSHL-----EDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 41 dd~r~~F~CPfC~e~fD~~~-----L~~H~-----~eeH~~e~k~vVCPVCaa~~s 86 (171)
++....+.||.|.+.|+... -|.|. ..... .+...||+|...+.
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~--~~~~~CP~Cr~~~~ 63 (78)
T 2ect_A 10 EHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWL--EQHDSCPVCRKSLT 63 (78)
T ss_dssp TTSSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHH--TTTCSCTTTCCCCC
T ss_pred ccCCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHH--HcCCcCcCcCCccC
Confidence 34456789999988665332 25553 22221 12358999988764
No 200
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=77.37 E-value=1.2 Score=27.64 Aligned_cols=25 Identities=28% Similarity=0.608 Sum_probs=22.1
Q ss_pred ccCCCCCC-CCCHHHHHHhhhhhhcC
Q 030808 47 FPCPYCYE-DFDIASLCSHLEDEHSC 71 (171)
Q Consensus 47 F~CPfC~e-~fD~~~L~~H~~eeH~~ 71 (171)
--|-||-+ --|+..|..|+.+.|-.
T Consensus 10 qhcrfckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 10 QHCRFCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 36999999 88999999999999864
No 201
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=77.21 E-value=0.76 Score=31.94 Aligned_cols=32 Identities=13% Similarity=0.518 Sum_probs=23.9
Q ss_pred CCCCcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCccccc
Q 030808 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~ 85 (171)
.+.-+|.|+-||.+|++. +...+.||-|-.++
T Consensus 24 ~~~v~Y~C~~CG~~~e~~------------~~d~irCp~CG~RI 55 (70)
T 1twf_L 24 TATLKYICAECSSKLSLS------------RTDAVRCKDCGHRI 55 (70)
T ss_dssp -CCCCEECSSSCCEECCC------------TTSTTCCSSSCCCC
T ss_pred CceEEEECCCCCCcceeC------------CCCCccCCCCCceE
Confidence 356789999999977653 33567899998854
No 202
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.19 E-value=1.2 Score=28.85 Aligned_cols=45 Identities=24% Similarity=0.445 Sum_probs=27.3
Q ss_pred CCcccCCCCCCCCCHH-HH-HHh-----hhhhhcCCCCccccCCccccchhhHH
Q 030808 44 RPDFPCPYCYEDFDIA-SL-CSH-----LEDEHSCESKVTVCPICSVKVARDML 90 (171)
Q Consensus 44 r~~F~CPfC~e~fD~~-~L-~~H-----~~eeH~~e~k~vVCPVCaa~~s~d~l 90 (171)
...+.||.|.+.+... .| |.| |..... .....||+|...+..+.+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~~~~~~ 64 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSLPCKHVFCYLCVKGAS--WLGKRCALCRQEIPEDFL 64 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCT--TCSSBCSSSCCBCCHHHH
T ss_pred CCCCCCccCCcccCCCEEccCCCHHHHHHHHHHH--HCCCcCcCcCchhCHhhc
Confidence 4578999998854432 11 334 333222 223689999998866544
No 203
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=77.01 E-value=1.8 Score=26.92 Aligned_cols=27 Identities=26% Similarity=0.480 Sum_probs=22.1
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCE 72 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e 72 (171)
.|.|++|++ =-....|..|+...|...
T Consensus 37 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~ 64 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLSKHMKKFHGDM 64 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred CEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence 499999999 446789999998877643
No 204
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=76.93 E-value=2.1 Score=21.16 Aligned_cols=21 Identities=24% Similarity=0.630 Sum_probs=15.5
Q ss_pred ccCCCCCCCC-CHHHHHHhhhh
Q 030808 47 FPCPYCYEDF-DIASLCSHLED 67 (171)
Q Consensus 47 F~CPfC~e~f-D~~~L~~H~~e 67 (171)
|.|+.|++.| ....|..|...
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~~ 23 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQRV 23 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGGG
T ss_pred ccCCCCCCcCCCHHHHHHHHHH
Confidence 7899999955 45777788653
No 205
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=76.87 E-value=1.4 Score=22.09 Aligned_cols=21 Identities=29% Similarity=0.735 Sum_probs=16.1
Q ss_pred cccCCCCCCCC-CHHHHHHhhh
Q 030808 46 DFPCPYCYEDF-DIASLCSHLE 66 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~ 66 (171)
.|.|+.|++.| ....|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLR 24 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHHH
Confidence 48999999954 5677888864
No 206
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=76.82 E-value=2.3 Score=22.90 Aligned_cols=22 Identities=32% Similarity=0.659 Sum_probs=17.0
Q ss_pred cccCCCCCCCC-CHHHHHHhhhh
Q 030808 46 DFPCPYCYEDF-DIASLCSHLED 67 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~e 67 (171)
.|.|+.|++.| ....|..|...
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRKR 33 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHGG
T ss_pred CccCCCCCcccCcHHHHHHHHHH
Confidence 59999999954 56778888654
No 207
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.57 E-value=0.4 Score=30.78 Aligned_cols=45 Identities=18% Similarity=0.394 Sum_probs=26.6
Q ss_pred CCCCcccCCCCCCCCCHH--HHHHh-----hhhhhcCCCCccccCCccccchh
Q 030808 42 DVRPDFPCPYCYEDFDIA--SLCSH-----LEDEHSCESKVTVCPICSVKVAR 87 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~--~L~~H-----~~eeH~~e~k~vVCPVCaa~~s~ 87 (171)
+....+.||.|.+.+... --|.| |....-. .....||+|...+..
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 11 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLS-SSSPKCTACQESIVK 62 (66)
T ss_dssp SCCCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHT-TSSCCCTTTCCCCCT
T ss_pred cCCcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHH-hCcCCCCCCCcCCCh
Confidence 456689999997743321 12222 3333332 445689999887654
No 208
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=76.42 E-value=1.7 Score=21.77 Aligned_cols=22 Identities=41% Similarity=0.810 Sum_probs=17.2
Q ss_pred cccCCCCCCCC-CHHHHHHhhhh
Q 030808 46 DFPCPYCYEDF-DIASLCSHLED 67 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~e 67 (171)
.|.|+.|++.| ....|..|...
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~ 25 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLET 25 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 58999999954 57788888754
No 209
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=76.14 E-value=3.9 Score=26.04 Aligned_cols=44 Identities=23% Similarity=0.515 Sum_probs=23.9
Q ss_pred CCCCcccCCCCCCCCCHH-----HHHHh-----hhhhhcCCCCccccCCccccchh
Q 030808 42 DVRPDFPCPYCYEDFDIA-----SLCSH-----LEDEHSCESKVTVCPICSVKVAR 87 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~-----~L~~H-----~~eeH~~e~k~vVCPVCaa~~s~ 87 (171)
+......||.|.+.|+.. --|.| |...... +...||+|...+..
T Consensus 10 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~--~~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 10 EEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLI--TNKKCPICRVDIEA 63 (69)
T ss_dssp STTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHH--HCSBCTTTCSBSCS
T ss_pred cCCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHH--cCCCCcCcCccccC
Confidence 345678899997765421 11333 2222211 12369999877543
No 210
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.95 E-value=2 Score=24.40 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=22.2
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCP 79 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCP 79 (171)
.|.|++|++ =-....|..|.. .|..+ ++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-k~~~C~ 44 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQA-IHTGK-KPSGPS 44 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHT-TSCCC-CCCCSC
T ss_pred CeECCCCChhhCCHHHHHHHHH-HhCCC-CCCCCC
Confidence 599999999 445677888875 45433 445665
No 211
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.63 E-value=3.6 Score=23.21 Aligned_cols=32 Identities=22% Similarity=0.225 Sum_probs=21.6
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCP 79 (171)
.|.|+.|++.| ....|..|... |..+ ++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (44)
T 2eou_A 12 TSECQECGKIFRHSSLLIEHQAL-HAGE-SGPSSG 44 (44)
T ss_dssp CCCCTTTCCCCSSHHHHHHHHHH-HTTS-CCCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-HCCC-CCCCCC
Confidence 59999999955 46778889764 5433 334453
No 212
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=75.48 E-value=0.58 Score=32.31 Aligned_cols=51 Identities=14% Similarity=0.432 Sum_probs=31.7
Q ss_pred CcccCCCCCCCCCHHHH-----HHh-----hhhhhcC----C--CCccccCC--cccc--chhhHHhhhhh
Q 030808 45 PDFPCPYCYEDFDIASL-----CSH-----LEDEHSC----E--SKVTVCPI--CSVK--VARDMLSHITL 95 (171)
Q Consensus 45 ~~F~CPfC~e~fD~~~L-----~~H-----~~eeH~~----e--~k~vVCPV--Caa~--~s~d~l~HL~~ 95 (171)
..|.||.|.+.+..... |.| |-..|-. + ..++.||. |... +..+.+.-+..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~ll~ 74 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECMVA 74 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHHHSC
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHHHCC
Confidence 36889999886654432 444 3333322 1 24678999 9998 77776665543
No 213
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.46 E-value=2.9 Score=23.50 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=22.1
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCP 79 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCP 79 (171)
.|.|+.|++ =-....|..|.. .|..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~ 44 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQK-THAAK-SGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGG-GGCCC-CCTTCC
T ss_pred CeECCCCCCccCCHHHHHHHHH-HcCCC-CCcCCC
Confidence 599999999 456678888976 46543 334453
No 214
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.05 E-value=2 Score=24.18 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=21.3
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccC
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCP 79 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCP 79 (171)
.|.|++|++. -....|..|... |..+ +.-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQKT-HSGQ-SGPSSG 44 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHTT-SSSS-CSCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-cCCC-CCCCCC
Confidence 5999999994 456778888654 5443 334453
No 215
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=74.94 E-value=3.2 Score=22.27 Aligned_cols=26 Identities=31% Similarity=0.640 Sum_probs=18.9
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCE 72 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e 72 (171)
.|.|+.|++.| ....|..|.. .|..+
T Consensus 2 p~~C~~C~k~F~~~~~L~~H~~-~H~~~ 28 (33)
T 1rim_A 2 KFACPECPKRFMRSDHLSKHIT-LHELL 28 (33)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHH-HHTTT
T ss_pred cccCCCCCchhCCHHHHHHHHH-HhCCC
Confidence 38899999954 6678888875 46544
No 216
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.80 E-value=0.045 Score=34.15 Aligned_cols=44 Identities=16% Similarity=0.226 Sum_probs=27.5
Q ss_pred CcccCCCCCCCCCHH-HHHHhhhhhhcCCCCccccCCccccc--hhhHHhhhhhcc
Q 030808 45 PDFPCPYCYEDFDIA-SLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (171)
Q Consensus 45 ~~F~CPfC~e~fD~~-~L~~H~~eeH~~e~k~vVCPVCaa~~--s~d~l~HL~~qH 97 (171)
..|.|+.|++.|... .|.. .+.-.|++|...- ..+|..|+...+
T Consensus 17 ~~~~C~~C~k~f~~~~~l~~---------~~~~~C~~C~~~f~~~~~l~~H~~~H~ 63 (73)
T 2ctu_A 17 RSQKCSKCGIIFIRRSTLSR---------RKTPMCEKCRKDSCQEAALNKDEGNES 63 (73)
T ss_dssp SEEECSSSCCEEECCCCCCC---------SSSCCCHHHHHTCSCCCSSCCCSSCCC
T ss_pred CCeeCCcccchhCCHHHhCc---------CCCCCCCCCChhhcCHHHHHHHHHhhc
Confidence 359999998854322 2222 4567899997653 456777765533
No 217
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=74.51 E-value=2.4 Score=22.36 Aligned_cols=22 Identities=23% Similarity=0.638 Sum_probs=17.4
Q ss_pred cccCCCCCCC-CCHHHHHHhhhh
Q 030808 46 DFPCPYCYED-FDIASLCSHLED 67 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~e 67 (171)
.|.|+.|++. -....|..|...
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~ 29 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIRE 29 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCcchhCCHHHHHHHHHH
Confidence 5999999994 456788888764
No 218
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.38 E-value=2.2 Score=22.99 Aligned_cols=22 Identities=23% Similarity=0.532 Sum_probs=17.6
Q ss_pred cccCCCCCC-CCCHHHHHHhhhh
Q 030808 46 DFPCPYCYE-DFDIASLCSHLED 67 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~e 67 (171)
.|.|++|++ =-....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSHIKT 31 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHHHHH
Confidence 599999999 4556788889765
No 219
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.49 E-value=2.8 Score=22.28 Aligned_cols=25 Identities=28% Similarity=0.430 Sum_probs=18.9
Q ss_pred CcccCCCCCCCC-CHHHHHHhhhhhhc
Q 030808 45 PDFPCPYCYEDF-DIASLCSHLEDEHS 70 (171)
Q Consensus 45 ~~F~CPfC~e~f-D~~~L~~H~~eeH~ 70 (171)
..|.|+.|++.| ....|..|... |.
T Consensus 8 ~~~~C~~C~k~f~~~~~l~~H~~~-H~ 33 (36)
T 2elr_A 8 KTHLCDMCGKKFKSKGTLKSHKLL-HT 33 (36)
T ss_dssp SSCBCTTTCCBCSSHHHHHHHHHH-HS
T ss_pred CCeecCcCCCCcCchHHHHHHHHH-hc
Confidence 369999999966 56778888754 44
No 220
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.92 E-value=2.3 Score=22.64 Aligned_cols=24 Identities=33% Similarity=0.584 Sum_probs=18.3
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHS 70 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~ 70 (171)
.|.|++|++.| ....|..|... |.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~-H~ 33 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLRK-HT 33 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH-HT
T ss_pred CCCCCCCCcccCCHHHHHHHHHH-cc
Confidence 59999999955 56778889753 54
No 221
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.35 E-value=2.1 Score=22.95 Aligned_cols=23 Identities=22% Similarity=0.475 Sum_probs=17.9
Q ss_pred CcccCCCCCCCC-CHHHHHHhhhh
Q 030808 45 PDFPCPYCYEDF-DIASLCSHLED 67 (171)
Q Consensus 45 ~~F~CPfC~e~f-D~~~L~~H~~e 67 (171)
..|.|++|++.| ....|..|...
T Consensus 8 k~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elq_A 8 KPFKCSLCEYATRSKSNLKAHMNR 31 (36)
T ss_dssp CSEECSSSSCEESCHHHHHHHHHH
T ss_pred CCccCCCCCchhCCHHHHHHHHHH
Confidence 359999999954 67888889753
No 222
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=71.83 E-value=3.3 Score=21.90 Aligned_cols=22 Identities=32% Similarity=0.623 Sum_probs=17.5
Q ss_pred cccCCCCCCCC-CHHHHHHhhhh
Q 030808 46 DFPCPYCYEDF-DIASLCSHLED 67 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~e 67 (171)
.|.|++|++.| ....|..|...
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~~ 29 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLKV 29 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG
T ss_pred CeeCCCCCcccCCHHHHHHHHHH
Confidence 59999999954 67788889754
No 223
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.53 E-value=2.5 Score=23.81 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=20.2
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCCCcccc
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVC 78 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVC 78 (171)
.|.|++|++. -....|..|... |..+ ++-.|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C 43 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHERT-HARK-SGPSS 43 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHHHH-CCCC-CSSCC
T ss_pred CeECCCCCchhCCHHHHHHHhHh-cCCC-CCCCC
Confidence 5899999994 445778888754 5433 33344
No 224
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=71.31 E-value=0.79 Score=33.78 Aligned_cols=38 Identities=24% Similarity=0.477 Sum_probs=27.2
Q ss_pred ccCCCCCCCCCHHHHHHhhhhhhcC--------------CCCccccCCcccc
Q 030808 47 FPCPYCYEDFDIASLCSHLEDEHSC--------------ESKVTVCPICSVK 84 (171)
Q Consensus 47 F~CPfC~e~fD~~~L~~H~~eeH~~--------------e~k~vVCPVCaa~ 84 (171)
-.||.||+-+|-.+|++-+...-.+ +.-.-.||+|-.-
T Consensus 9 ~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEE 60 (95)
T 2k5c_A 9 AKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEE 60 (95)
T ss_dssp EECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCE
T ss_pred ccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHH
Confidence 3699999999999999876543332 1123459999874
No 225
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=70.92 E-value=2.4 Score=21.22 Aligned_cols=21 Identities=19% Similarity=0.509 Sum_probs=15.5
Q ss_pred cccCCCCCCCC-CHHHHHHhhh
Q 030808 46 DFPCPYCYEDF-DIASLCSHLE 66 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~ 66 (171)
.|.|+.|++.| ....|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYR 24 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHH
Confidence 48899999944 4577777865
No 226
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=70.59 E-value=3.1 Score=26.03 Aligned_cols=27 Identities=19% Similarity=0.289 Sum_probs=20.7
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCCC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCES 73 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e~ 73 (171)
.|.|++|++ =-....|..|+.. |..++
T Consensus 42 ~~~C~~C~~~f~~~~~L~~H~~~-H~~~~ 69 (72)
T 1x6e_A 42 PYKCLECGKAFSQNSGLINHQRI-HTSGP 69 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHSSS
T ss_pred CeECCCCCcccCCHHHHHHHHHh-cCCCC
Confidence 599999999 4567889999875 54443
No 227
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=70.20 E-value=1.7 Score=22.05 Aligned_cols=21 Identities=29% Similarity=0.797 Sum_probs=15.6
Q ss_pred cccCCCCCCCC-CHHHHHHhhh
Q 030808 46 DFPCPYCYEDF-DIASLCSHLE 66 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~ 66 (171)
.|.|+.|++.| ....|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHT
T ss_pred CcCCCCCCcccCCHHHHHHHHH
Confidence 48899999944 5567788864
No 228
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.02 E-value=2.5 Score=24.03 Aligned_cols=32 Identities=28% Similarity=0.387 Sum_probs=21.3
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCP 79 (171)
.|.|++|++.| ....|..|... |..+ +.-.||
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~ 44 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKHLRS-HERT-DPSGPS 44 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH-HHHS-CCSSCS
T ss_pred CeeCcccChhhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 59999999944 56778888754 5433 344554
No 229
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.42 E-value=3 Score=23.07 Aligned_cols=25 Identities=28% Similarity=0.590 Sum_probs=18.9
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSC 71 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~ 71 (171)
.|.|+.|++.| ....|..|.. .|..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 36 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIR-VHTG 36 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGG-GTSC
T ss_pred CeeCCCccchhCCHHHHHHHHH-HhCC
Confidence 59999999954 5677888975 4543
No 230
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=68.87 E-value=0.53 Score=35.69 Aligned_cols=51 Identities=14% Similarity=0.264 Sum_probs=32.5
Q ss_pred CCCcCCCC-CCCCCcccCCCCCC--CCCHHHHHHhhhhhhcCCCCccccCCccccchhhHHhhh
Q 030808 33 SIDDFEVE-DDVRPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHI 93 (171)
Q Consensus 33 g~e~~~~d-dd~r~~F~CPfC~e--~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~s~d~l~HL 93 (171)
.+++++.+ ++..-.+.|| ||. .+....|-. ...|.|+-|+-.+-.-|..|-
T Consensus 98 ~~~~m~~~e~~~~f~~~Cr-CG~~f~i~~~~l~~---------~~~v~C~sCSl~~~v~~~~~~ 151 (155)
T 2l6l_A 98 YLEEMSWNEGDHSFYLSCR-CGGKYSVSKDEAEE---------VSLISCDTCSLIIELLHYNHH 151 (155)
T ss_dssp ETTTSEEETTTTEEEEECS-SSCEEEEETTHHHH---------CCEEECSSSSCEEEEECCCCC
T ss_pred eHHHhccccCCcEEEEcCC-CCCeEEecHHHhCC---------CCEEECCCCceEEEEEEcccc
Confidence 34555543 2334579999 988 666655543 167999999988655454443
No 231
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=68.65 E-value=3.6 Score=27.05 Aligned_cols=46 Identities=26% Similarity=0.603 Sum_probs=24.1
Q ss_pred cccCC-CCCCCCCHHHHHHhhhhhhcCCCCccccCCccccc-hhhHHhhh
Q 030808 46 DFPCP-YCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV-ARDMLSHI 93 (171)
Q Consensus 46 ~F~CP-fC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~-s~d~l~HL 93 (171)
.-.|| .|++.+-...|-.|+..+ -..+.+.|+.|...+ ..++-.|.
T Consensus 16 ~v~C~~~C~~~v~r~~l~~H~~~~--C~~r~v~C~~C~~~~~~~~l~~H~ 63 (76)
T 2yuc_A 16 VIPCPNRCPMKLSRRDLPAHLQHD--CPKRRLKCEFCGCDFSGEAYESHE 63 (76)
T ss_dssp CCBCTTCCSCBCCSSSSTTTTTTS--CTTSCCCCSSSCCCCCHHHHHHTT
T ss_pred ccCCCccccHHhhHhHHHhhCHhh--CCCcceECCCCCCccCHHHHHHHH
Confidence 45564 566666666666665431 123456666665543 34555554
No 232
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=68.48 E-value=1.2 Score=31.33 Aligned_cols=17 Identities=18% Similarity=0.518 Sum_probs=13.5
Q ss_pred CCCCCcccCCCCCC-CCC
Q 030808 41 DDVRPDFPCPYCYE-DFD 57 (171)
Q Consensus 41 dd~r~~F~CPfC~e-~fD 57 (171)
..+...|+||||+. .+.
T Consensus 22 ~~q~~ky~C~fCgk~~vk 39 (73)
T 1ffk_W 22 IKHKKKYKCPVCGFPKLK 39 (73)
T ss_pred HhcccCccCCCCCCceeE
Confidence 36788999999998 554
No 233
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.30 E-value=3.4 Score=22.90 Aligned_cols=26 Identities=23% Similarity=0.425 Sum_probs=19.9
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcCC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSCE 72 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~e 72 (171)
.|.|++|++ =-....|..|.. .|..+
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~ 37 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVL-IHTGS 37 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTH-HHHSC
T ss_pred CEeCCCcChhhCCHHHHHHHHH-HcCCC
Confidence 599999999 456788889986 56543
No 234
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=71.01 E-value=1.1 Score=22.72 Aligned_cols=22 Identities=23% Similarity=0.484 Sum_probs=15.9
Q ss_pred cccCCCCCCCCC-HHHHHHhhhh
Q 030808 46 DFPCPYCYEDFD-IASLCSHLED 67 (171)
Q Consensus 46 ~F~CPfC~e~fD-~~~L~~H~~e 67 (171)
.|.|++|++.|. ...|..|...
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVRI 25 (30)
Confidence 488999999554 4667777653
No 235
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=67.72 E-value=1.3 Score=27.84 Aligned_cols=43 Identities=21% Similarity=0.369 Sum_probs=25.0
Q ss_pred CCcccCCCCCCCCCHHH--HHHhhhhhhcCCCCccccCCccccch
Q 030808 44 RPDFPCPYCYEDFDIAS--LCSHLEDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 44 r~~F~CPfC~e~fD~~~--L~~H~~eeH~~e~k~vVCPVCaa~~s 86 (171)
...+.||.|.+.|.... =|.|.-=..........||+|...+.
T Consensus 4 ~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWP 48 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSS
T ss_pred ccCCCceEeCCccCCeEEcCCCCcccHHHHccCCCCCCcCCcEee
Confidence 34688999988554321 13343222233335678999987753
No 236
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.70 E-value=2.8 Score=22.42 Aligned_cols=22 Identities=14% Similarity=0.120 Sum_probs=17.0
Q ss_pred cccCCCCCC-CCCHHHHHHhhhh
Q 030808 46 DFPCPYCYE-DFDIASLCSHLED 67 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~e 67 (171)
.|.|+.|+. --....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHHHH
Confidence 599999999 4456678888753
No 237
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=70.18 E-value=1.2 Score=22.25 Aligned_cols=21 Identities=24% Similarity=0.610 Sum_probs=15.1
Q ss_pred cccCCCCCCCCC-HHHHHHhhh
Q 030808 46 DFPCPYCYEDFD-IASLCSHLE 66 (171)
Q Consensus 46 ~F~CPfC~e~fD-~~~L~~H~~ 66 (171)
.|.|+.|++.|. ...|..|..
T Consensus 2 p~~C~~C~k~f~~~~~l~~H~~ 23 (26)
T 2lvu_A 2 PYVCERCGKRFVQSSQLANHIR 23 (26)
Confidence 378999999665 466777754
No 238
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=66.31 E-value=3.4 Score=26.93 Aligned_cols=14 Identities=36% Similarity=0.992 Sum_probs=10.9
Q ss_pred CCCCCcccCCCCCC
Q 030808 41 DDVRPDFPCPYCYE 54 (171)
Q Consensus 41 dd~r~~F~CPfC~e 54 (171)
+++...|.||.|+.
T Consensus 31 ~~lP~dw~CP~Cg~ 44 (52)
T 1e8j_A 31 EDLPDDWACPVCGA 44 (52)
T ss_dssp TSSCTTCCCSSSCC
T ss_pred HHCCCCCcCCCCCC
Confidence 35677889999976
No 239
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=65.78 E-value=11 Score=26.62 Aligned_cols=47 Identities=17% Similarity=0.395 Sum_probs=26.1
Q ss_pred CCCCCCcccCCCCCCCCCHHH--HHHh-----hhhhhcCCCCccccCCccccchh
Q 030808 40 EDDVRPDFPCPYCYEDFDIAS--LCSH-----LEDEHSCESKVTVCPICSVKVAR 87 (171)
Q Consensus 40 ddd~r~~F~CPfC~e~fD~~~--L~~H-----~~eeH~~e~k~vVCPVCaa~~s~ 87 (171)
.++....|.||.|.+.+.... -|.| |....-.. ....||+|...+..
T Consensus 12 ~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 12 DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRD-AGHKCPVDNEILLE 65 (118)
T ss_dssp SSCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-HCSBCTTTCCBCCG
T ss_pred ccCCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHHHhh-CCCCCCCCCCCcCH
Confidence 345677899999988544221 1222 22222111 12389999887643
No 240
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=65.33 E-value=3.8 Score=22.48 Aligned_cols=26 Identities=23% Similarity=0.747 Sum_probs=19.2
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCE 72 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e 72 (171)
.|.|+.|++.| ....|..|... |..+
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~ 32 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMNV-HRRD 32 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHHT-TCCS
T ss_pred ceECCCCCcccCCHHHHHHHHHH-cCCC
Confidence 59999999944 66778889754 5443
No 241
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=65.09 E-value=2.4 Score=33.34 Aligned_cols=27 Identities=22% Similarity=0.572 Sum_probs=19.0
Q ss_pred CCcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCcccc
Q 030808 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (171)
Q Consensus 44 r~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~ 84 (171)
...|.||.||--++- .-+.+||||.+.
T Consensus 136 ~~~~~C~~CG~i~~~--------------~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 136 KKVYICPICGYTAVD--------------EAPEYCPVCGAP 162 (170)
T ss_dssp SCEEECTTTCCEEES--------------CCCSBCTTTCCB
T ss_pred CCeeEeCCCCCeeCC--------------CCCCCCCCCCCC
Confidence 368999999983330 234499999864
No 242
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.50 E-value=3.8 Score=22.65 Aligned_cols=25 Identities=28% Similarity=0.478 Sum_probs=18.9
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSC 71 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~ 71 (171)
.|.|++|++.| ....|..|.. .|..
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 35 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHER-IHTG 35 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGG-GCCC
T ss_pred CeECCCCCCCcCCHHHHHHHHH-HhCC
Confidence 59999999944 5677888975 4544
No 243
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=64.49 E-value=2.1 Score=30.50 Aligned_cols=22 Identities=27% Similarity=0.611 Sum_probs=18.8
Q ss_pred CcccCCCCCCCCCHHHHHHhhh
Q 030808 45 PDFPCPYCYEDFDIASLCSHLE 66 (171)
Q Consensus 45 ~~F~CPfC~e~fD~~~L~~H~~ 66 (171)
+.=-||||+.-+...+|..|+.
T Consensus 29 s~NiCPYC~nRls~eGl~RHV~ 50 (77)
T 2l7x_A 29 SYNICPYCASRLTSDGLARHVT 50 (77)
T ss_dssp TTTCCTTTCCCCCTTTHHHHHT
T ss_pred CcccChhhhccCCccchhhhcc
Confidence 4457999999999999999974
No 244
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.21 E-value=4.4 Score=22.46 Aligned_cols=25 Identities=36% Similarity=0.767 Sum_probs=18.8
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSC 71 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~ 71 (171)
.|.|+.|++.| ....|..|.. .|..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 36 (42)
T 2eos_A 11 PYPCEICGTRFRHLQTLKSHLR-IHTG 36 (42)
T ss_dssp CBCCSSSCCCBSSHHHHHHHTT-TTSC
T ss_pred CEECCCCCCccCCHHHHHHHHH-hcCC
Confidence 69999999955 4677888976 4543
No 245
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=67.69 E-value=1.4 Score=22.31 Aligned_cols=21 Identities=29% Similarity=0.616 Sum_probs=15.3
Q ss_pred cccCCCCCCCC-CHHHHHHhhh
Q 030808 46 DFPCPYCYEDF-DIASLCSHLE 66 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~ 66 (171)
.|.|+.|++.| ....|..|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASSLIAHVR 23 (29)
Confidence 37899999965 4566777765
No 246
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=63.80 E-value=0.96 Score=28.15 Aligned_cols=40 Identities=23% Similarity=0.628 Sum_probs=23.3
Q ss_pred cccCCCCCCCCCHHH---------HHHh-----hhhhhcCCCCccccCCccccchh
Q 030808 46 DFPCPYCYEDFDIAS---------LCSH-----LEDEHSCESKVTVCPICSVKVAR 87 (171)
Q Consensus 46 ~F~CPfC~e~fD~~~---------L~~H-----~~eeH~~e~k~vVCPVCaa~~s~ 87 (171)
.+.||.|.+.+.... -|.| |...... +...||+|...+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--NANTCPTCRKKINH 56 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHH--HCSBCTTTCCBCTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHH--cCCCCCCCCccCCc
Confidence 578999988765431 1333 2222221 14589999887644
No 247
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=63.70 E-value=1.1 Score=32.15 Aligned_cols=42 Identities=24% Similarity=0.475 Sum_probs=25.0
Q ss_pred CCcccCCCCCCCCCHHH-------HHHhhhhhhcCCCCccccCCccccch
Q 030808 44 RPDFPCPYCYEDFDIAS-------LCSHLEDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 44 r~~F~CPfC~e~fD~~~-------L~~H~~eeH~~e~k~vVCPVCaa~~s 86 (171)
...+.||.|.+.|.... .|..|-..+-. .+...||+|...++
T Consensus 50 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 50 EETFQCICCQELVFRPITTVCQHNVCKDCLDRSFR-AQVFSCPACRYDLG 98 (124)
T ss_dssp HHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH-TTCCBCTTTCCBCC
T ss_pred ccCCCCCcCChHHcCcEEeeCCCcccHHHHHHHHh-HCcCCCCCCCccCC
Confidence 34689999988554221 12224444332 34568999988764
No 248
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=63.27 E-value=0.89 Score=32.06 Aligned_cols=15 Identities=13% Similarity=0.671 Sum_probs=12.1
Q ss_pred CCCCcccCCCCCC-CC
Q 030808 42 DVRPDFPCPYCYE-DF 56 (171)
Q Consensus 42 d~r~~F~CPfC~e-~f 56 (171)
.+...|.||||+. .+
T Consensus 22 ~q~~ky~C~fCgk~~v 37 (72)
T 3jyw_9 22 QQHARYDCSFCGKKTV 37 (72)
T ss_dssp HHHSCBCCSSCCSSCB
T ss_pred HhccCccCCCCCCcee
Confidence 4567899999998 54
No 249
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.23 E-value=7.5 Score=26.87 Aligned_cols=32 Identities=22% Similarity=0.565 Sum_probs=21.4
Q ss_pred CCCCCCHHHHHHhhhhhhcCCCCccccCC--cccc
Q 030808 52 CYEDFDIASLCSHLEDEHSCESKVTVCPI--CSVK 84 (171)
Q Consensus 52 C~e~fD~~~L~~H~~eeH~~e~k~vVCPV--Caa~ 84 (171)
||-.|+...+..++...+. ......||+ |...
T Consensus 26 cGh~f~r~cI~~~l~~~~~-~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 26 CGHTYEEDAIVRMIESRQK-RKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCCEEEHHHHHHHHHHHHT-TTCCBCCCSTTCCCC
T ss_pred CCCeecHHHHHHHHHHccC-cCCCCCCCcCcCccc
Confidence 4556777788888776542 234678999 9754
No 250
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.90 E-value=6.4 Score=26.38 Aligned_cols=26 Identities=35% Similarity=0.580 Sum_probs=21.4
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSC 71 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~ 71 (171)
.|.|++|++.| ....|..|+...|..
T Consensus 54 ~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 54 ALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp HHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 69999999955 678899999877754
No 251
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=62.36 E-value=0.94 Score=32.74 Aligned_cols=13 Identities=31% Similarity=0.846 Sum_probs=11.2
Q ss_pred CCCCcccCCCCCC
Q 030808 42 DVRPDFPCPYCYE 54 (171)
Q Consensus 42 d~r~~F~CPfC~e 54 (171)
.+.+.|.||||+.
T Consensus 31 ~q~~ky~CpfCGk 43 (83)
T 3j21_i 31 KMRQKHTCPVCGR 43 (83)
T ss_dssp HHHSCBCCSSSCS
T ss_pred HhhcccCCCCCCC
Confidence 4567899999998
No 252
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=62.35 E-value=4.4 Score=22.31 Aligned_cols=26 Identities=27% Similarity=0.448 Sum_probs=19.5
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCE 72 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e 72 (171)
.|.|+.|++.| ....|..|.. .|..+
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 37 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGSLAVHQR-SCSQS 37 (42)
T ss_dssp CEECSSSCCEESSHHHHHHHHH-HTTCC
T ss_pred CeECCCCCcccCCHHHHHHHhh-hcCCC
Confidence 59999999944 6788889975 45443
No 253
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.04 E-value=6.3 Score=22.19 Aligned_cols=25 Identities=24% Similarity=0.395 Sum_probs=19.4
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSC 71 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~ 71 (171)
.|.|+.|++.| ....|..|... |..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~ 37 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHERT-HAG 37 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GSS
T ss_pred CeECCCCCcccCchHHHHHHHhH-hcC
Confidence 69999999944 57889999764 544
No 254
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=60.76 E-value=6.1 Score=23.06 Aligned_cols=22 Identities=36% Similarity=0.686 Sum_probs=12.9
Q ss_pred cccCCCCCC-CCCHHHHHHhhhh
Q 030808 46 DFPCPYCYE-DFDIASLCSHLED 67 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~e 67 (171)
.|.||.|.. -=|...|..|-++
T Consensus 3 k~~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp CEECTTSSCEESSHHHHHHHHHH
T ss_pred cccCccccccCcChHHHHHHHHH
Confidence 466666666 5566666665543
No 255
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.53 E-value=6.3 Score=26.03 Aligned_cols=22 Identities=27% Similarity=0.542 Sum_probs=19.5
Q ss_pred CcccCCCCCCCCC-HHHHHHhhh
Q 030808 45 PDFPCPYCYEDFD-IASLCSHLE 66 (171)
Q Consensus 45 ~~F~CPfC~e~fD-~~~L~~H~~ 66 (171)
..|.||=|+..|. ...|..|..
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhh
Confidence 5899999999888 788999987
No 256
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=60.19 E-value=2.8 Score=35.85 Aligned_cols=37 Identities=27% Similarity=0.563 Sum_probs=24.7
Q ss_pred CCcccCCCCCCC-------------CCHHHHHHhhhhhhcCCCCccccCC--ccccc
Q 030808 44 RPDFPCPYCYED-------------FDIASLCSHLEDEHSCESKVTVCPI--CSVKV 85 (171)
Q Consensus 44 r~~F~CPfC~e~-------------fD~~~L~~H~~eeH~~e~k~vVCPV--Caa~~ 85 (171)
...|.||.|.+- |+...+..++. +.....||| |...+
T Consensus 179 ~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~-----~~~~~~CPvtGCr~~l 230 (267)
T 3htk_C 179 KIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQ-----GYTTRDCPQAACSQVV 230 (267)
T ss_dssp BCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHST-----TCSCEECSGGGCSCEE
T ss_pred ceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHH-----hCCCCCCCcccccCcC
Confidence 568999999652 44444444443 334578999 98865
No 257
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=60.11 E-value=7.2 Score=23.09 Aligned_cols=25 Identities=32% Similarity=0.519 Sum_probs=18.1
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcC
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSC 71 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~ 71 (171)
.|.|+.|+.. -....|..|... |..
T Consensus 24 ~~~C~~C~k~f~~~~~L~~H~~~-H~~ 49 (54)
T 1yui_A 24 PATCPICYAVIRQSRNLRRHLEL-RHF 49 (54)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HTT
T ss_pred CccCCCCCcccCCHHHHHHHHHH-hcc
Confidence 5899999994 456778888753 543
No 258
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=60.04 E-value=6.2 Score=25.33 Aligned_cols=27 Identities=26% Similarity=0.426 Sum_probs=20.8
Q ss_pred cccCCCCCCC-CCHHHHHHhhhhhhcCCC
Q 030808 46 DFPCPYCYED-FDIASLCSHLEDEHSCES 73 (171)
Q Consensus 46 ~F~CPfC~e~-fD~~~L~~H~~eeH~~e~ 73 (171)
.|.|+.|++. -....|..|.. .|..++
T Consensus 32 p~~C~~C~k~F~~~~~L~~H~~-~Htgep 59 (60)
T 4gzn_C 32 PRSCPECGKCFRDQSEVNRHLK-VHQNKP 59 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHGG-GGSCC-
T ss_pred CeECCCCCCCcCCHHHHHHHhC-ccCCCC
Confidence 6999999994 55788999975 576653
No 259
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=59.89 E-value=1.9 Score=32.78 Aligned_cols=29 Identities=31% Similarity=0.590 Sum_probs=21.7
Q ss_pred CCcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCccccc
Q 030808 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 44 r~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~ 85 (171)
.-.|.|+-||+.|+.. .....||.|-..+
T Consensus 130 ~~~y~C~~Cg~~~~~~-------------~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 130 KWRYVCIGCGRKFSTL-------------PPGGVCPDCGSKV 158 (165)
T ss_dssp CCCEEESSSCCEESSC-------------CGGGBCTTTCCBE
T ss_pred cEEEECCCCCCcccCC-------------CCCCcCCCCCCcc
Confidence 4579999999976543 3346999998753
No 260
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=59.76 E-value=1.8 Score=30.63 Aligned_cols=44 Identities=23% Similarity=0.468 Sum_probs=26.0
Q ss_pred CCCcccCCCCCCCCCHH--HHHHh-----hhhhhcCCCCccccCCccccchh
Q 030808 43 VRPDFPCPYCYEDFDIA--SLCSH-----LEDEHSCESKVTVCPICSVKVAR 87 (171)
Q Consensus 43 ~r~~F~CPfC~e~fD~~--~L~~H-----~~eeH~~e~k~vVCPVCaa~~s~ 87 (171)
....|.||.|.+.+... --|.| |..... +.....||+|...+..
T Consensus 12 ~~~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 12 SLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTV-EKASLCCPFCRRRVSS 62 (115)
T ss_dssp CHHHHBCTTTCSBCSSCEECTTSCEECHHHHCCCC-CTTTSBCTTTCCBCHH
T ss_pred CCCCCCCccCCcccCceeEcCCCCHHhHHHHHHHH-hHCcCCCCCCCcccCc
Confidence 34579999998844321 12333 333322 2335789999988754
No 261
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=58.11 E-value=0.63 Score=32.15 Aligned_cols=41 Identities=37% Similarity=0.719 Sum_probs=25.9
Q ss_pred CCcccCCCCCCCCCHH-HH--HHh-----hhhhhcCCCCccccCCccccch
Q 030808 44 RPDFPCPYCYEDFDIA-SL--CSH-----LEDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 44 r~~F~CPfC~e~fD~~-~L--~~H-----~~eeH~~e~k~vVCPVCaa~~s 86 (171)
...+.||.|.+.|... .+ |.| |-...-. ....||+|...+.
T Consensus 20 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~ 68 (99)
T 2y43_A 20 DDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLS--YKTQCPTCCVTVT 68 (99)
T ss_dssp HHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHT--TCCBCTTTCCBCC
T ss_pred CCCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHH--CCCCCCCCCCcCC
Confidence 3478999998855433 22 444 4444433 2468999988764
No 262
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=57.79 E-value=3.6 Score=26.42 Aligned_cols=12 Identities=33% Similarity=0.805 Sum_probs=5.7
Q ss_pred CCCcccCCCCCC
Q 030808 43 VRPDFPCPYCYE 54 (171)
Q Consensus 43 ~r~~F~CPfC~e 54 (171)
+...+.||.|+.
T Consensus 27 lP~dw~CP~Cg~ 38 (46)
T 6rxn_A 27 LPDDWCCPVCGV 38 (46)
T ss_dssp SCTTCBCTTTCC
T ss_pred CCCCCcCcCCCC
Confidence 334455555543
No 263
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.61 E-value=1.9 Score=27.62 Aligned_cols=43 Identities=26% Similarity=0.590 Sum_probs=25.3
Q ss_pred CCCCcccCCCCCCCCCHHHH-HHh-----hhhhhcCCCCccccCCccccch
Q 030808 42 DVRPDFPCPYCYEDFDIASL-CSH-----LEDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~L-~~H-----~~eeH~~e~k~vVCPVCaa~~s 86 (171)
+....+.||.|.+.+....| |.| |..... .+...||+|...+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 11 QLTDEEECCICMDGRADLILPCAHSFCQKCIDKWS--DRHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCCCCSSSCCSCCSEEETTTEEECHHHHHHSS--CCCSSCHHHHHCTT
T ss_pred cCCCCCCCeeCCcCccCcccCCCCcccHHHHHHHH--HCcCcCCCcCCccc
Confidence 44567899999885443211 333 333222 24678999977653
No 264
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=57.47 E-value=8.8 Score=26.17 Aligned_cols=26 Identities=23% Similarity=0.533 Sum_probs=21.4
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcC
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSC 71 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~ 71 (171)
.|.|+.|++.| ....|..|+...|..
T Consensus 62 ~~~C~~Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 62 MFTCHHCGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred CeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence 69999999966 568899997778864
No 265
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=57.45 E-value=3.8 Score=30.10 Aligned_cols=15 Identities=13% Similarity=0.671 Sum_probs=11.9
Q ss_pred CCCCcccCCCCCC-CC
Q 030808 42 DVRPDFPCPYCYE-DF 56 (171)
Q Consensus 42 d~r~~F~CPfC~e-~f 56 (171)
.+...|+||||+. .+
T Consensus 32 ~q~~ky~CpfCgk~~v 47 (92)
T 3izc_m 32 QQHARYDCSFCGKKTV 47 (92)
T ss_dssp HHHSCCCCSSSCSSCC
T ss_pred HHhcCCcCCCCCCcee
Confidence 4567899999998 53
No 266
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=57.19 E-value=3.7 Score=30.13 Aligned_cols=13 Identities=15% Similarity=0.682 Sum_probs=11.1
Q ss_pred CCCCcccCCCCCC
Q 030808 42 DVRPDFPCPYCYE 54 (171)
Q Consensus 42 d~r~~F~CPfC~e 54 (171)
.+...|+||||+.
T Consensus 32 ~q~~ky~CpfCgk 44 (92)
T 3iz5_m 32 SQHSKYFCEFCGK 44 (92)
T ss_dssp HHHSCBCCTTTCS
T ss_pred HHhccccCcccCC
Confidence 4567899999998
No 267
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=56.60 E-value=1 Score=28.77 Aligned_cols=41 Identities=22% Similarity=0.624 Sum_probs=24.1
Q ss_pred CcccCCCCCCCCCHHH---------HHHh-----hhhhhcCCCCccccCCccccchh
Q 030808 45 PDFPCPYCYEDFDIAS---------LCSH-----LEDEHSCESKVTVCPICSVKVAR 87 (171)
Q Consensus 45 ~~F~CPfC~e~fD~~~---------L~~H-----~~eeH~~e~k~vVCPVCaa~~s~ 87 (171)
..+.||.|.+.++... -|.| |-...-. +...||+|...+..
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK--NANTCPTCRKKINH 63 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHH--HCSBCTTTCCBCCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHH--cCCCCCCCCCccCh
Confidence 3688999998776531 1233 3332221 12489999887643
No 268
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=56.40 E-value=3.5 Score=29.29 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=29.2
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCcccc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVK 84 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVCaa~ 84 (171)
.|.|+.|++.| ....|..|....|..+ ++-.|.++...
T Consensus 50 pf~C~~Cgk~F~~~~~L~~H~~r~Htge-kpy~C~~~~~~ 88 (102)
T 2ghf_A 50 SYVCVECNFLTKRYDALSEHNLKYHPGE-ENFKLTMVKRN 88 (102)
T ss_dssp CEEETTTTEEESSTHHHHTHHHHTSTTC-CCEEEEECCCS
T ss_pred CcCCCCCCcccCCHHHHHHHHHHhcCCC-CCeeCCcccCC
Confidence 59999999954 5678999966778765 56789886543
No 269
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=56.22 E-value=12 Score=24.67 Aligned_cols=35 Identities=23% Similarity=0.362 Sum_probs=24.7
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccCCccc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSV 83 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCPVCaa 83 (171)
-|.|+.|++.| ....|..|... |..+ ...|-+|..
T Consensus 13 py~C~~CgK~F~~~s~L~~H~r~-Htg~--~~~~~~~~~ 48 (66)
T 2epp_A 13 ILPCGLCGKVFTDANRLRQHEAQ-HGVT--SLQLGYIDL 48 (66)
T ss_dssp CCCCTTTCCCCSCHHHHHHHHHH-HTTT--SCCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHhhhhh-hCCC--ccccccccC
Confidence 59999999955 56789999875 6554 345556654
No 270
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=56.03 E-value=3.4 Score=29.41 Aligned_cols=30 Identities=27% Similarity=0.541 Sum_probs=20.8
Q ss_pred CCCcccCCCCCC--CCCHHHHHHhhhhhhcCCCCccccCCccccc
Q 030808 43 VRPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 43 ~r~~F~CPfC~e--~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~ 85 (171)
+...|+|||||. -++. ......||-|-...
T Consensus 24 q~~~y~Cp~CG~~~v~r~-------------atGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 24 MNEDHACPNCGEDRVDRQ-------------GTGIWQCSYCDYKF 55 (83)
T ss_dssp HHSCEECSSSCCEEEEEE-------------ETTEEEETTTCCEE
T ss_pred ccccCcCCCCCCcceecc-------------CCCeEECCCCCCEe
Confidence 446899999998 2222 23467899998764
No 271
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=55.39 E-value=1.9 Score=34.10 Aligned_cols=27 Identities=19% Similarity=0.511 Sum_probs=18.5
Q ss_pred CcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCcccc
Q 030808 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (171)
Q Consensus 45 ~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~ 84 (171)
..|.|+.||--+|-. .-+-+||+|.+.
T Consensus 154 ~~~~C~~CG~~~~g~-------------~~p~~CP~C~~~ 180 (191)
T 1lko_A 154 TKWRCRNCGYVHEGT-------------GAPELCPACAHP 180 (191)
T ss_dssp EEEEETTTCCEEEEE-------------ECCSBCTTTCCB
T ss_pred ceEEECCCCCEeeCC-------------CCCCCCCCCcCC
Confidence 379999999854411 122399999874
No 272
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.23 E-value=11 Score=24.28 Aligned_cols=31 Identities=26% Similarity=0.326 Sum_probs=22.6
Q ss_pred ccCCCCCCCC-CHHHHHHhhhhhhcCCCCccccC
Q 030808 47 FPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (171)
Q Consensus 47 F~CPfC~e~f-D~~~L~~H~~eeH~~e~k~vVCP 79 (171)
|.|+.|++.| ....|..|+.. |..+ ++-.|+
T Consensus 63 ~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 94 (95)
T 2ej4_A 63 EECPREGKSFKAKYKLVNHIRV-HTGE-KSGPSS 94 (95)
T ss_dssp TTCSSTTCCCSSHHHHHHHHHH-HHTC-CCCSSC
T ss_pred cCCCCCCcccCCHHHHHHHHHh-cCCC-CCCCCC
Confidence 9999999955 67889999875 6544 344554
No 273
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=54.10 E-value=11 Score=19.26 Aligned_cols=22 Identities=32% Similarity=0.640 Sum_probs=16.2
Q ss_pred cccCC--CCCCCC-CHHHHHHhhhh
Q 030808 46 DFPCP--YCYEDF-DIASLCSHLED 67 (171)
Q Consensus 46 ~F~CP--fC~e~f-D~~~L~~H~~e 67 (171)
.|.|+ .|++.| ....|..|...
T Consensus 2 p~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CCBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred CcCCcCCCCCcccCCHhHHHHHHHH
Confidence 37897 899955 56788888754
No 274
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=54.07 E-value=1.4 Score=33.13 Aligned_cols=43 Identities=23% Similarity=0.529 Sum_probs=26.3
Q ss_pred CCCCcccCCCCCCCCCHH-HH--HHh-----hhhhhcCCCCccccCCccccc
Q 030808 42 DVRPDFPCPYCYEDFDIA-SL--CSH-----LEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~-~L--~~H-----~~eeH~~e~k~vVCPVCaa~~ 85 (171)
+....+.||.|.+.|... .+ |.| |....-. .....||+|...+
T Consensus 50 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 50 SLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALR-SGNKECPTCRKKL 100 (165)
T ss_dssp CCHHHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHH-TTCCBCTTTCCBC
T ss_pred hCCCCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHH-hCcCCCCCCCCcC
Confidence 345679999998855432 22 333 4444332 2356899998875
No 275
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=54.07 E-value=8.4 Score=25.32 Aligned_cols=11 Identities=45% Similarity=1.102 Sum_probs=6.3
Q ss_pred CCcccCCCCCC
Q 030808 44 RPDFPCPYCYE 54 (171)
Q Consensus 44 r~~F~CPfC~e 54 (171)
-++..|||||-
T Consensus 21 lP~IrCpyCGy 31 (48)
T 4ayb_P 21 LPGVRCPYCGY 31 (48)
T ss_dssp CSSSCCTTTCC
T ss_pred CCCcccCccCc
Confidence 45566666654
No 276
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=53.76 E-value=1.4 Score=30.97 Aligned_cols=41 Identities=29% Similarity=0.551 Sum_probs=25.1
Q ss_pred CCcccCCCCCCCCCH-HHH--HHh-----hhhhhcCCCCccccCCccccch
Q 030808 44 RPDFPCPYCYEDFDI-ASL--CSH-----LEDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 44 r~~F~CPfC~e~fD~-~~L--~~H-----~~eeH~~e~k~vVCPVCaa~~s 86 (171)
...+.||.|.+.|.. ..+ |.| |...+-.. ...||+|...+.
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~--~~~CP~Cr~~~~ 61 (108)
T 2ckl_A 13 NPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET--SKYCPICDVQVH 61 (108)
T ss_dssp GGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTS--CSBCTTTCCBSC
T ss_pred CCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHh--CCcCcCCCcccc
Confidence 347899999884432 222 333 44444432 378999988764
No 277
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=53.67 E-value=4 Score=30.57 Aligned_cols=15 Identities=20% Similarity=0.802 Sum_probs=11.9
Q ss_pred CCCCcccCCCCCC-CC
Q 030808 42 DVRPDFPCPYCYE-DF 56 (171)
Q Consensus 42 d~r~~F~CPfC~e-~f 56 (171)
.+...|+|||||. .+
T Consensus 32 ~q~aky~CpfCgk~~v 47 (103)
T 4a17_Y 32 TQHAKYGCPFCGKVAV 47 (103)
T ss_dssp HHHSCEECTTTCCEEE
T ss_pred HhhcCCCCCCCCCcee
Confidence 4567899999998 53
No 278
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=53.47 E-value=3.4 Score=25.76 Aligned_cols=22 Identities=18% Similarity=0.475 Sum_probs=18.0
Q ss_pred CcccCCCCCCCCCHHHHHHhhh
Q 030808 45 PDFPCPYCYEDFDIASLCSHLE 66 (171)
Q Consensus 45 ~~F~CPfC~e~fD~~~L~~H~~ 66 (171)
..|.||-|++.+.+.+..+|.+
T Consensus 8 ~~~~C~~C~~~i~~~~~~EH~D 29 (39)
T 2i5o_A 8 DQVPCEKCGSLVPVWDMPEHMD 29 (39)
T ss_dssp CEEECTTTCCEEEGGGHHHHHH
T ss_pred CCcccccccCcCCcccccchhh
Confidence 4689999999888888888864
No 279
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=53.35 E-value=0.94 Score=31.18 Aligned_cols=41 Identities=22% Similarity=0.579 Sum_probs=23.9
Q ss_pred CCcccCCCCCCCCCHHH-----HHHh-----hhhhhcCCCCccccCCccccch
Q 030808 44 RPDFPCPYCYEDFDIAS-----LCSH-----LEDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 44 r~~F~CPfC~e~fD~~~-----L~~H-----~~eeH~~e~k~vVCPVCaa~~s 86 (171)
.....||.|.++|.... -|.| |....-. ++..||+|...+.
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~--~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQ--KSGTCPVCRCMFP 88 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHT--TTCBCTTTCCBSS
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHH--cCCcCcCcCccCC
Confidence 45788999987654311 1444 3333221 3458999987654
No 280
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=53.23 E-value=0.81 Score=27.98 Aligned_cols=38 Identities=26% Similarity=0.692 Sum_probs=19.8
Q ss_pred cccCCCCCCCCCH----HHH--HHh-----hhhhhcCCCCccccCCccccc
Q 030808 46 DFPCPYCYEDFDI----ASL--CSH-----LEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 46 ~F~CPfC~e~fD~----~~L--~~H-----~~eeH~~e~k~vVCPVCaa~~ 85 (171)
...||.|.++++. ..| |.| |..... .++..||+|...+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~--~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWL--GSHSTCPLCRLTV 53 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTT--TTCCSCSSSCCCS
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHH--HcCCcCcCCCCEe
Confidence 3567777775543 222 333 222221 2345799997653
No 281
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=53.06 E-value=5.8 Score=23.33 Aligned_cols=19 Identities=32% Similarity=0.683 Sum_probs=13.0
Q ss_pred ccccCCccc-cchhhHHhhh
Q 030808 75 VTVCPICSV-KVARDMLSHI 93 (171)
Q Consensus 75 ~vVCPVCaa-~~s~d~l~HL 93 (171)
.|-||||-. ||...+-.||
T Consensus 6 ~vqcpvcqq~mpaahin~hl 25 (29)
T 3vhs_A 6 QVQCPVCQQMMPAAHINSHL 25 (29)
T ss_dssp EEECTTTCCEEEGGGHHHHH
T ss_pred eeeChHHHHhCcHHHHHHHH
Confidence 478999965 4666555555
No 282
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=52.10 E-value=3.8 Score=21.70 Aligned_cols=21 Identities=33% Similarity=0.790 Sum_probs=13.7
Q ss_pred cccCCCCCCCCCH-HHHHHhhh
Q 030808 46 DFPCPYCYEDFDI-ASLCSHLE 66 (171)
Q Consensus 46 ~F~CPfC~e~fD~-~~L~~H~~ 66 (171)
.|.|+.|++.|.. ..|..|..
T Consensus 2 p~~C~~C~k~f~~~~~L~~H~~ 23 (32)
T 2kfq_A 2 AFACPACPKRFMRSDALSKHIK 23 (32)
T ss_dssp CSSSSSSCTTHHHHHTTSSSTT
T ss_pred CCCCCCCCcccCCHHHHHHHHH
Confidence 3788888886654 34556653
No 283
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=51.34 E-value=6.9 Score=26.75 Aligned_cols=32 Identities=22% Similarity=0.404 Sum_probs=23.2
Q ss_pred CCCCcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCccccc
Q 030808 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~ 85 (171)
...-.|.|.-|+.++++. ....+.||-|..++
T Consensus 17 ~~~v~Y~C~~Cg~~~~l~------------~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 17 PATMIYLCADCGARNTIQ------------AKEVIRCRECGHRV 48 (63)
T ss_dssp --CCCCBCSSSCCBCCCC------------SSSCCCCSSSCCCC
T ss_pred CCCeEEECCCCCCeeecC------------CCCceECCCCCcEE
Confidence 345689999999977743 13568999998765
No 284
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=51.31 E-value=2.1 Score=29.90 Aligned_cols=42 Identities=29% Similarity=0.521 Sum_probs=24.4
Q ss_pred CCcccCCCCCCCCCHHHH---HHh-----hhhhhcCCCCccccCCccccch
Q 030808 44 RPDFPCPYCYEDFDIASL---CSH-----LEDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 44 r~~F~CPfC~e~fD~~~L---~~H-----~~eeH~~e~k~vVCPVCaa~~s 86 (171)
...+.||.|.+.|...-. |.| |-...-... ...||+|...+.
T Consensus 20 ~~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~-~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 20 AEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQ-RAQCPHCRAPLQ 69 (100)
T ss_dssp HHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHT-CSBCTTTCCBCC
T ss_pred CCCCCCccCCccccCccccCCCCChhhHHHHHHHHHHC-cCCCCCCCCcCC
Confidence 347899999885543222 222 333332222 268999988764
No 285
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=51.28 E-value=9.5 Score=31.17 Aligned_cols=26 Identities=35% Similarity=0.634 Sum_probs=22.0
Q ss_pred CCcccCCCCCCCC-C-HHHHHHhhhhhh
Q 030808 44 RPDFPCPYCYEDF-D-IASLCSHLEDEH 69 (171)
Q Consensus 44 r~~F~CPfC~e~f-D-~~~L~~H~~eeH 69 (171)
...+.|..|+.+| + ...|..|++++-
T Consensus 167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e~ 194 (204)
T 3sp4_A 167 QEDLKCWRCGETFGRHFTKLKAHLQEEY 194 (204)
T ss_dssp GSCCBCTTTCCBCTTCHHHHHHHHHHHH
T ss_pred CCCceeCCCCchhhcccHHHHHHHHHHH
Confidence 4568999999988 3 999999998863
No 286
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=51.18 E-value=13 Score=18.92 Aligned_cols=24 Identities=25% Similarity=0.546 Sum_probs=17.1
Q ss_pred cccCC--CCCCCC-CHHHHHHhhhhhhc
Q 030808 46 DFPCP--YCYEDF-DIASLCSHLEDEHS 70 (171)
Q Consensus 46 ~F~CP--fC~e~f-D~~~L~~H~~eeH~ 70 (171)
.|.|+ .|+..| ....|..|... |.
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~ 29 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKS-HQ 29 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGG-GT
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHH-cc
Confidence 48898 799954 46778888654 43
No 287
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.79 E-value=0.72 Score=30.28 Aligned_cols=42 Identities=29% Similarity=0.593 Sum_probs=23.3
Q ss_pred CCCcccCCCCCCCCCHH----HH-HHhh-----hhhhcCCCCccccCCccccch
Q 030808 43 VRPDFPCPYCYEDFDIA----SL-CSHL-----EDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 43 ~r~~F~CPfC~e~fD~~----~L-~~H~-----~eeH~~e~k~vVCPVCaa~~s 86 (171)
......||.|.++|+.. .| |.|. ...-- ..+..||+|...+.
T Consensus 20 ~~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~--~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 20 QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL--KANRTCPICRADSG 71 (75)
T ss_dssp SSSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHH--HHCSSCTTTCCCCC
T ss_pred cCCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHH--HcCCcCcCcCCcCC
Confidence 34467899998866532 11 4442 11111 12347999987653
No 288
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=50.31 E-value=12 Score=20.22 Aligned_cols=25 Identities=24% Similarity=0.444 Sum_probs=18.4
Q ss_pred cccCCC--CCCCC-CHHHHHHhhhhhhcC
Q 030808 46 DFPCPY--CYEDF-DIASLCSHLEDEHSC 71 (171)
Q Consensus 46 ~F~CPf--C~e~f-D~~~L~~H~~eeH~~ 71 (171)
.|.|++ |++.| ....|..|... |..
T Consensus 8 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~ 35 (37)
T 1va1_A 8 QHICHIQGCGKVYGKTSHLRAHLRW-HTG 35 (37)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHHH-HHT
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh-cCC
Confidence 599996 99954 67778888754 543
No 289
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=50.22 E-value=2.9 Score=28.90 Aligned_cols=43 Identities=21% Similarity=0.529 Sum_probs=23.2
Q ss_pred CcccCCCCCCCCCHH--HHHHh-----hhhhhcCC-CCccccCCccccchh
Q 030808 45 PDFPCPYCYEDFDIA--SLCSH-----LEDEHSCE-SKVTVCPICSVKVAR 87 (171)
Q Consensus 45 ~~F~CPfC~e~fD~~--~L~~H-----~~eeH~~e-~k~vVCPVCaa~~s~ 87 (171)
..+.||.|.+.+... --|.| |...+... .....||+|...+..
T Consensus 20 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 367888887744321 11222 33333322 234689999887643
No 290
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=49.92 E-value=12 Score=25.67 Aligned_cols=25 Identities=28% Similarity=0.616 Sum_probs=20.6
Q ss_pred cccCCCCCCCC-CHHHHHHhhhhhhc
Q 030808 46 DFPCPYCYEDF-DIASLCSHLEDEHS 70 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~~eeH~ 70 (171)
.|.|++|++.| ....|..|....|.
T Consensus 100 ~~~C~~C~k~f~~~~~l~~H~~~h~~ 125 (129)
T 2wbt_A 100 TKVCPVCKKEFTSTDSALDHVCKKHN 125 (129)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHCC
Confidence 49999999955 66789999887765
No 291
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=49.78 E-value=3 Score=31.60 Aligned_cols=43 Identities=21% Similarity=0.453 Sum_probs=25.7
Q ss_pred CCcccCCCCCCCCCHHH-------HHHhhhhhhcCCCCccccCCccccchh
Q 030808 44 RPDFPCPYCYEDFDIAS-------LCSHLEDEHSCESKVTVCPICSVKVAR 87 (171)
Q Consensus 44 r~~F~CPfC~e~fD~~~-------L~~H~~eeH~~e~k~vVCPVCaa~~s~ 87 (171)
...|.||.|.+.|.... .|..|...+-. .....||+|...+..
T Consensus 76 ~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 76 EQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFK-AQVFSCPACRHDLGQ 125 (150)
T ss_dssp HHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH-TTCCBCTTTCCBCCT
T ss_pred ccCCEeecCChhhcCCEEcCCCCchhHHHHHHHHH-hCCCcCCCCCccCCC
Confidence 45799999988444221 22334444433 234589999887654
No 292
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=49.41 E-value=5.9 Score=31.75 Aligned_cols=27 Identities=26% Similarity=0.502 Sum_probs=19.5
Q ss_pred CCcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCcccc
Q 030808 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (171)
Q Consensus 44 r~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~ 84 (171)
...|.|+.||--+| + ..+-+||+|.+.
T Consensus 169 ~~~~~C~~CG~i~~--g------------~~p~~CP~C~~~ 195 (202)
T 1yuz_A 169 DKFHLCPICGYIHK--G------------EDFEKCPICFRP 195 (202)
T ss_dssp CCEEECSSSCCEEE--S------------SCCSBCTTTCCB
T ss_pred CcEEEECCCCCEEc--C------------cCCCCCCCCCCC
Confidence 36899999998544 1 123799999764
No 293
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=49.19 E-value=5 Score=30.58 Aligned_cols=32 Identities=28% Similarity=0.667 Sum_probs=22.0
Q ss_pred CCCCcccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccc
Q 030808 42 DVRPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 42 d~r~~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~ 85 (171)
.+...|.|||||. .+-..+ ..--.|+-|-...
T Consensus 56 ~q~akytCPfCGk~~vKR~a------------vGIW~C~~Cgk~f 88 (116)
T 3cc2_Z 56 EMNEDHACPNCGEDRVDRQG------------TGIWQCSYCDYKF 88 (116)
T ss_dssp HHHSCEECSSSCCEEEEEEE------------TTEEEETTTCCEE
T ss_pred HhccCCcCCCCCCceeEecC------------ceeEECCCCCCEE
Confidence 5577899999998 554322 2345689887764
No 294
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=48.02 E-value=7.4 Score=26.82 Aligned_cols=7 Identities=43% Similarity=1.436 Sum_probs=3.6
Q ss_pred ccCCccc
Q 030808 77 VCPICSV 83 (171)
Q Consensus 77 VCPVCaa 83 (171)
+||+|.+
T Consensus 42 ~CP~Cga 48 (70)
T 1dx8_A 42 MCPACRS 48 (70)
T ss_dssp BCTTTCC
T ss_pred cCCCCCC
Confidence 4555544
No 295
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=46.29 E-value=1.2 Score=31.52 Aligned_cols=45 Identities=13% Similarity=0.178 Sum_probs=24.8
Q ss_pred CCCCcccCCCCCCCCCHHH--HHH-----hhhhhhcCCCCccccCCccccchh
Q 030808 42 DVRPDFPCPYCYEDFDIAS--LCS-----HLEDEHSCESKVTVCPICSVKVAR 87 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~--L~~-----H~~eeH~~e~k~vVCPVCaa~~s~ 87 (171)
+....|.||.|.+.+.... -|. .|....-.. ....||+|...+..
T Consensus 19 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 19 HFVKSISCQICEHILADPVETSCKHLFCRICILRCLKV-MGSYCPSCRYPCFP 70 (116)
T ss_dssp HHHHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-TCSBCTTTCCBCCG
T ss_pred hccCCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhH-CcCcCCCCCCCCCH
Confidence 3455799999988554321 121 222222211 14579999887643
No 296
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.24 E-value=4.6 Score=22.63 Aligned_cols=25 Identities=24% Similarity=0.351 Sum_probs=18.9
Q ss_pred cccCCCCCC-CCCHHHHHHhhhhhhcC
Q 030808 46 DFPCPYCYE-DFDIASLCSHLEDEHSC 71 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~~L~~H~~eeH~~ 71 (171)
.|.|+.|++ =-....|..|... |..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~ 37 (44)
T 2eox_A 12 SYNCNECGKAFTRIFHLTRHQKI-HTR 37 (44)
T ss_dssp CEEETTTTEEESSSHHHHTTHHH-HCC
T ss_pred CeECcccCcccCCHHHHHHHHHH-hCC
Confidence 599999999 4456778889764 543
No 297
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.15 E-value=5.7 Score=26.19 Aligned_cols=38 Identities=21% Similarity=0.472 Sum_probs=23.7
Q ss_pred CCcccCCCCCC-CCCHHH-------HHHhhhhhhcCCCCccccCCccccchh
Q 030808 44 RPDFPCPYCYE-DFDIAS-------LCSHLEDEHSCESKVTVCPICSVKVAR 87 (171)
Q Consensus 44 r~~F~CPfC~e-~fD~~~-------L~~H~~eeH~~e~k~vVCPVCaa~~s~ 87 (171)
.....|+.|.+ .-|..- +|..|.. +...||+|...+..
T Consensus 13 ~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~------~~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 13 ENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK------YFQQCPMCRQFVQE 58 (68)
T ss_dssp CCSSCCSSSSSSCCCCEETTTTBCCSCTTHHH------HCSSCTTTCCCCCC
T ss_pred CCCCCCCCcCcCCCCEEEECCCChhhhHHHHh------cCCCCCCCCcchhc
Confidence 34678999988 444433 3333333 23579999987643
No 298
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.78 E-value=5.8 Score=27.82 Aligned_cols=18 Identities=11% Similarity=0.220 Sum_probs=12.8
Q ss_pred hhhHHhhhhhcccchhhh
Q 030808 86 ARDMLSHITLQHGHLFKL 103 (171)
Q Consensus 86 s~d~l~HL~~qH~~~~k~ 103 (171)
+.+|.+||...|...++.
T Consensus 48 TS~L~rHL~~~H~~e~~~ 65 (76)
T 2djr_A 48 TTALWKHLKSMHREELEK 65 (76)
T ss_dssp SCHHHHHHHHTTHHHHHH
T ss_pred hHHHHHHHHHHCHHHHHh
Confidence 457888887777777654
No 299
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=45.04 E-value=4.8 Score=28.62 Aligned_cols=37 Identities=24% Similarity=0.537 Sum_probs=22.0
Q ss_pred CcccCCCCCCCCC-HHHH--HHh-----hhhhhcCCCCccccCCccccc
Q 030808 45 PDFPCPYCYEDFD-IASL--CSH-----LEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 45 ~~F~CPfC~e~fD-~~~L--~~H-----~~eeH~~e~k~vVCPVCaa~~ 85 (171)
..+.||.|.+.|. -..| |.| |...+.. ..||+|...+
T Consensus 21 ~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~----~~CP~Cr~~~ 65 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG----TGCPVCYTPA 65 (117)
T ss_dssp HTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT----TBCSSSCCBC
T ss_pred hCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc----CCCcCCCCcC
Confidence 4688999988443 3333 333 2332221 6799998775
No 300
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=44.59 E-value=6 Score=27.11 Aligned_cols=31 Identities=6% Similarity=0.110 Sum_probs=20.8
Q ss_pred CCCCcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCccc
Q 030808 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa 83 (171)
.+.....||.|.-.+.... +....+||-|..
T Consensus 4 ~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (68)
T 2jr6_A 4 KFLDILVCPVTKGRLEYHQ-----------DKQELWSRQAKL 34 (68)
T ss_dssp SSSCCCBCSSSCCBCEEET-----------TTTEEEETTTTE
T ss_pred HHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 4567899999987444221 236688998854
No 301
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=43.91 E-value=7.7 Score=28.03 Aligned_cols=9 Identities=22% Similarity=0.508 Sum_probs=6.2
Q ss_pred CcccCCCCC
Q 030808 45 PDFPCPYCY 53 (171)
Q Consensus 45 ~~F~CPfC~ 53 (171)
..|.|+.||
T Consensus 34 ~~y~C~vCG 42 (87)
T 1s24_A 34 LKWICITCG 42 (87)
T ss_dssp CEEEETTTT
T ss_pred ceEECCCCC
Confidence 467777775
No 302
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=43.82 E-value=5.4 Score=29.12 Aligned_cols=30 Identities=27% Similarity=0.544 Sum_probs=22.1
Q ss_pred CCCCcccCCCCCCCCCHHHHHHhhhhhhcCCCCcc-ccCCcccc
Q 030808 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVT-VCPICSVK 84 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~v-VCPVCaa~ 84 (171)
+....|.|+-||..|.. +.... .||.|...
T Consensus 69 ~~p~~~~C~~CG~~~e~-------------~~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 69 DEKVELECKDCSHVFKP-------------NALDYGVCEKCHSK 99 (119)
T ss_dssp EECCEEECSSSSCEECS-------------CCSTTCCCSSSSSC
T ss_pred eccceEEcCCCCCEEeC-------------CCCCCCcCccccCC
Confidence 34568999999996665 12356 89999765
No 303
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=43.49 E-value=8.3 Score=25.06 Aligned_cols=13 Identities=38% Similarity=0.974 Sum_probs=11.2
Q ss_pred CCCCcccCCCCCC
Q 030808 42 DVRPDFPCPYCYE 54 (171)
Q Consensus 42 d~r~~F~CPfC~e 54 (171)
++...+.||.|+.
T Consensus 31 ~lP~dw~CP~Cg~ 43 (52)
T 1yk4_A 31 DLPDDWVCPLCGA 43 (52)
T ss_dssp GSCTTCBCTTTCC
T ss_pred HCCCCCcCCCCCC
Confidence 5677899999987
No 304
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=43.40 E-value=14 Score=27.98 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=26.9
Q ss_pred CCCCccccCCccccc--hhhHHhhhhhcccchhhh
Q 030808 71 CESKVTVCPICSVKV--ARDMLSHITLQHGHLFKL 103 (171)
Q Consensus 71 ~e~k~vVCPVCaa~~--s~d~l~HL~~qH~~~~k~ 103 (171)
.|..+++|-.|...- ...++.|+...|+|.+..
T Consensus 11 ~e~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~ 45 (121)
T 1wir_A 11 HGRQHTPCLFCDRLFASAEETFSHCKLEHQFNIDS 45 (121)
T ss_dssp CCCCCEECSSSCCEESSHHHHHHHHHHSSCCCHHH
T ss_pred CCCCceeEecCCCcccCHHHHHHHHHHhcCCCHHH
Confidence 355679999998763 668999999999997754
No 305
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=43.25 E-value=23 Score=21.09 Aligned_cols=12 Identities=42% Similarity=0.991 Sum_probs=8.3
Q ss_pred cccCCCCCCCCC
Q 030808 46 DFPCPYCYEDFD 57 (171)
Q Consensus 46 ~F~CPfC~e~fD 57 (171)
.+.||.|.+.+.
T Consensus 5 ~~~C~IC~~~~~ 16 (55)
T 2ecm_A 5 SSGCPICLEDIH 16 (55)
T ss_dssp CCSCTTTCCCCC
T ss_pred CCcCcccChhhc
Confidence 467888877653
No 306
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=42.97 E-value=8.5 Score=25.30 Aligned_cols=13 Identities=38% Similarity=0.912 Sum_probs=11.0
Q ss_pred CCCCcccCCCCCC
Q 030808 42 DVRPDFPCPYCYE 54 (171)
Q Consensus 42 d~r~~F~CPfC~e 54 (171)
++...+.||.|+.
T Consensus 32 ~lP~dw~CP~Cga 44 (55)
T 2v3b_B 32 DIPADWVCPDCGV 44 (55)
T ss_dssp GSCTTCCCTTTCC
T ss_pred HCCCCCcCCCCCC
Confidence 4677899999987
No 307
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=42.96 E-value=11 Score=21.95 Aligned_cols=20 Identities=30% Similarity=0.482 Sum_probs=16.5
Q ss_pred cccCCCCCCCC-CHHHHHHhh
Q 030808 46 DFPCPYCYEDF-DIASLCSHL 65 (171)
Q Consensus 46 ~F~CPfC~e~f-D~~~L~~H~ 65 (171)
-|.|+.|++.| ....|..|.
T Consensus 8 p~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 8 RFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCEETTTTEECSCHHHHHHHH
T ss_pred CeECCCCCCccCCHhHccCcC
Confidence 69999999955 567788887
No 308
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.94 E-value=14 Score=21.55 Aligned_cols=22 Identities=32% Similarity=0.430 Sum_probs=17.5
Q ss_pred cccCCC--CCC-CCCHHHHHHhhhh
Q 030808 46 DFPCPY--CYE-DFDIASLCSHLED 67 (171)
Q Consensus 46 ~F~CPf--C~e-~fD~~~L~~H~~e 67 (171)
-|.|++ |++ =.....|..|+..
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r~ 33 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLKV 33 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 499987 999 5577888899753
No 309
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=42.35 E-value=1.3 Score=31.03 Aligned_cols=12 Identities=25% Similarity=0.578 Sum_probs=9.3
Q ss_pred CccccCCccccc
Q 030808 74 KVTVCPICSVKV 85 (171)
Q Consensus 74 k~vVCPVCaa~~ 85 (171)
+...||+|.+..
T Consensus 81 ~~~~CP~CR~~~ 92 (114)
T 1v87_A 81 GSLQCPSCKTIY 92 (114)
T ss_dssp SCCBCTTTCCBS
T ss_pred CCCcCCCCCCcc
Confidence 456899998764
No 310
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=42.27 E-value=21 Score=23.08 Aligned_cols=26 Identities=27% Similarity=0.477 Sum_probs=22.3
Q ss_pred CCcccCC--CCCC-CCCHHHHHHhhhhhh
Q 030808 44 RPDFPCP--YCYE-DFDIASLCSHLEDEH 69 (171)
Q Consensus 44 r~~F~CP--fC~e-~fD~~~L~~H~~eeH 69 (171)
...|.|. -|+. .-+...|+.|+..+|
T Consensus 36 ~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 36 MEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp SCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 3579998 8988 777899999999887
No 311
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=41.93 E-value=11 Score=26.92 Aligned_cols=14 Identities=43% Similarity=1.032 Sum_probs=11.2
Q ss_pred CCCCCcccCCCCCC
Q 030808 41 DDVRPDFPCPYCYE 54 (171)
Q Consensus 41 dd~r~~F~CPfC~e 54 (171)
+++...|.||.|+.
T Consensus 55 edlPddW~CPvCga 68 (81)
T 2kn9_A 55 DDIPDDWSCPDCGA 68 (81)
T ss_dssp TTSCTTCCCTTTCC
T ss_pred hHCCCCCcCCCCCC
Confidence 35677899999987
No 312
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=41.78 E-value=2 Score=27.24 Aligned_cols=41 Identities=24% Similarity=0.581 Sum_probs=22.5
Q ss_pred cccCCCCCC-CCCHH------HHHHh-----hhhhhcCCCCccccCCccccchh
Q 030808 46 DFPCPYCYE-DFDIA------SLCSH-----LEDEHSCESKVTVCPICSVKVAR 87 (171)
Q Consensus 46 ~F~CPfC~e-~fD~~------~L~~H-----~~eeH~~e~k~vVCPVCaa~~s~ 87 (171)
++.||.|.+ .+... .-|.| |.+.... .+...||+|...+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFV-RGAGNCPECGTPLRK 55 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHH-TTSSSCTTTCCCCSS
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHH-cCCCcCCCCCCcccc
Confidence 467888876 33221 11333 4444422 235689999887644
No 313
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=40.99 E-value=12 Score=18.34 Aligned_cols=22 Identities=27% Similarity=0.454 Sum_probs=15.7
Q ss_pred cccCC--CCCCCC-CHHHHHHhhhh
Q 030808 46 DFPCP--YCYEDF-DIASLCSHLED 67 (171)
Q Consensus 46 ~F~CP--fC~e~f-D~~~L~~H~~e 67 (171)
.|.|+ .|++.| ....|..|...
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHHH
Confidence 37788 999844 56778888653
No 314
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=40.74 E-value=9.7 Score=25.12 Aligned_cols=13 Identities=38% Similarity=0.958 Sum_probs=11.1
Q ss_pred CCCCcccCCCCCC
Q 030808 42 DVRPDFPCPYCYE 54 (171)
Q Consensus 42 d~r~~F~CPfC~e 54 (171)
++...+.||.|+.
T Consensus 32 ~lP~dw~CP~Cg~ 44 (54)
T 4rxn_A 32 DIPDDWVCPLCGV 44 (54)
T ss_dssp GSCTTCBCTTTCC
T ss_pred HCCCCCcCcCCCC
Confidence 5677899999987
No 315
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=40.73 E-value=10 Score=29.88 Aligned_cols=12 Identities=25% Similarity=0.504 Sum_probs=6.4
Q ss_pred hhHHhhhhhccc
Q 030808 87 RDMLSHITLQHG 98 (171)
Q Consensus 87 ~d~l~HL~~qH~ 98 (171)
.++..|+...|+
T Consensus 53 ~~l~~H~~~~H~ 64 (193)
T 2a25_A 53 DAVMPHLMHQHK 64 (193)
T ss_dssp TTHHHHHHHHCT
T ss_pred HHHHHHHHHHCC
Confidence 355555555554
No 316
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=40.45 E-value=14 Score=32.26 Aligned_cols=32 Identities=19% Similarity=0.423 Sum_probs=20.3
Q ss_pred cccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCc-cccchhhHH
Q 030808 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPIC-SVKVARDML 90 (171)
Q Consensus 46 ~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVC-aa~~s~d~l 90 (171)
.-.|||||..+.. +-+.-+|||| .+.+|.+-+
T Consensus 278 ~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~~~ 310 (320)
T 3mkr_B 278 VEKCPLSGACYSP-------------EFKGQICKVTTVTEIGKDVI 310 (320)
T ss_dssp CEECTTTCCEECG-------------GGTTSBCTTTSSBBSSCCCC
T ss_pred CccCCCCCCeech-------------hhCCCCCCCCcCcccCCccc
Confidence 4589999874321 2345699999 445665543
No 317
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=40.37 E-value=6.7 Score=27.01 Aligned_cols=31 Identities=16% Similarity=0.375 Sum_probs=20.8
Q ss_pred CCCCcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCccc
Q 030808 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa 83 (171)
.+.....||.|.-.+.... +....+||-|..
T Consensus 4 ~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (70)
T 2js4_A 4 RLLDILVCPVCKGRLEFQR-----------AQAELVCNADRL 34 (70)
T ss_dssp CCCCCCBCTTTCCBEEEET-----------TTTEEEETTTTE
T ss_pred HHhhheECCCCCCcCEEeC-----------CCCEEEcCCCCc
Confidence 4567899999977443211 245689999854
No 318
>1i7f_A Heat shock protein 33; HSP33, redox sensitive molecular chaperone, chaperone; 2.70A {Escherichia coli} SCOP: d.193.1.1 PDB: 1xjh_A
Probab=39.01 E-value=6.4 Score=33.44 Aligned_cols=19 Identities=26% Similarity=0.658 Sum_probs=0.0
Q ss_pred CCcccCCCCCC--CCCHHHHH
Q 030808 44 RPDFPCPYCYE--DFDIASLC 62 (171)
Q Consensus 44 r~~F~CPfC~e--~fD~~~L~ 62 (171)
..+..|.||++ .||..+|-
T Consensus 258 ~iev~C~FC~~~Y~F~~~dl~ 278 (292)
T 1i7f_A 258 EIDMHCDYCGNHYLFNAMDIA 278 (292)
T ss_dssp ---------------------
T ss_pred CEEEEeeCCCCEEEeCHHHHH
Confidence 44555555555 55554443
No 319
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=38.94 E-value=19 Score=19.11 Aligned_cols=25 Identities=24% Similarity=0.381 Sum_probs=18.2
Q ss_pred cccCCC--CCC-CCCHHHHHHhhhhhhcC
Q 030808 46 DFPCPY--CYE-DFDIASLCSHLEDEHSC 71 (171)
Q Consensus 46 ~F~CPf--C~e-~fD~~~L~~H~~eeH~~ 71 (171)
.|.|++ |+. =-....|..|... |..
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~ 33 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKHK-HEM 33 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHHH-HHT
T ss_pred ceECCCCCCCcccCCHHHHHHHHHH-hCC
Confidence 599995 999 4456778889754 543
No 320
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=38.89 E-value=5.5 Score=27.82 Aligned_cols=35 Identities=23% Similarity=0.462 Sum_probs=23.1
Q ss_pred ccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCccccch
Q 030808 47 FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 47 F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~s 86 (171)
..||.|.+.++...+.. -..+.....||||-....
T Consensus 49 ~~CP~Cr~~~~~~~l~~-----l~i~~~~~~C~iC~~~~~ 83 (133)
T 4ap4_A 49 NTCPTCRKKINHKRYHP-----IYIGSGTVSCPICMDGYS 83 (133)
T ss_dssp SBCTTTCCBCTTTCEEE-----CBCSSSSCBCTTTCCBHH
T ss_pred CCCCCCCCcCccccccc-----cccCCCCCCCCCCCCccc
Confidence 48999998776544322 122455678999987653
No 321
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=37.90 E-value=6 Score=28.97 Aligned_cols=39 Identities=31% Similarity=0.694 Sum_probs=22.8
Q ss_pred CcccCCCCCCCCCH-HHH-HHh-----hhhhhcCCCCccccCCccccc
Q 030808 45 PDFPCPYCYEDFDI-ASL-CSH-----LEDEHSCESKVTVCPICSVKV 85 (171)
Q Consensus 45 ~~F~CPfC~e~fD~-~~L-~~H-----~~eeH~~e~k~vVCPVCaa~~ 85 (171)
..+.||.|.+.|.. ..| |.| |-...- .+...||+|...+
T Consensus 52 ~~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~ 97 (138)
T 4ayc_A 52 NELQCIICSEYFIEAVTLNCAHSFCSYCINEWM--KRKIECPICRKDI 97 (138)
T ss_dssp HHSBCTTTCSBCSSEEEETTSCEEEHHHHHHHT--TTCSBCTTTCCBC
T ss_pred ccCCCcccCcccCCceECCCCCCccHHHHHHHH--HcCCcCCCCCCcC
Confidence 35789999884432 222 333 433332 2345799998765
No 322
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=37.41 E-value=6.1 Score=27.06 Aligned_cols=31 Identities=13% Similarity=0.289 Sum_probs=20.3
Q ss_pred CCCCcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCccc
Q 030808 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa 83 (171)
.+.....||.|.-.+.... +....+||-|..
T Consensus 4 ~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (68)
T 2hf1_A 4 KFLEILVCPLCKGPLVFDK-----------SKDELICKGDRL 34 (68)
T ss_dssp CCEEECBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred HHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 4556889999977444221 245678998854
No 323
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=37.37 E-value=7 Score=26.83 Aligned_cols=31 Identities=10% Similarity=0.348 Sum_probs=20.5
Q ss_pred CCCCcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCccc
Q 030808 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (171)
Q Consensus 42 d~r~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa 83 (171)
.+.....||.|.-.+.... +....+||-|..
T Consensus 4 ~LLeiL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (69)
T 2pk7_A 4 KLLDILACPICKGPLKLSA-----------DKTELISKGAGL 34 (69)
T ss_dssp CGGGTCCCTTTCCCCEECT-----------TSSEEEETTTTE
T ss_pred HHHhheeCCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 4556889999977443211 245688999854
No 324
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=37.22 E-value=28 Score=24.41 Aligned_cols=28 Identities=21% Similarity=0.506 Sum_probs=21.6
Q ss_pred cccCCC--CCCCC-CHHHHHHhhhhhhcCCC
Q 030808 46 DFPCPY--CYEDF-DIASLCSHLEDEHSCES 73 (171)
Q Consensus 46 ~F~CPf--C~e~f-D~~~L~~H~~eeH~~e~ 73 (171)
-|.|++ |++-| ....|..|....|..+.
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~rriHTgEK 57 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQAVHKSDL 57 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHHHHSSSCC
T ss_pred CeECCCCCcChhHcCHHHHHHHhhhhCCCCC
Confidence 499976 99955 56678899887888643
No 325
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=36.50 E-value=17 Score=25.72 Aligned_cols=11 Identities=27% Similarity=0.794 Sum_probs=8.6
Q ss_pred cCCCCCCCCCH
Q 030808 48 PCPYCYEDFDI 58 (171)
Q Consensus 48 ~CPfC~e~fD~ 58 (171)
+||.||..++.
T Consensus 49 ~CPvCgs~l~~ 59 (112)
T 1l8d_A 49 KCPVCGRELTD 59 (112)
T ss_dssp ECTTTCCEECH
T ss_pred CCCCCCCcCCH
Confidence 69999887664
No 326
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=36.00 E-value=8.3 Score=26.39 Aligned_cols=32 Identities=9% Similarity=0.119 Sum_probs=20.8
Q ss_pred CCCCCcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCccc
Q 030808 41 DDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (171)
Q Consensus 41 dd~r~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa 83 (171)
..+.....||.|.-.+.... +....+||-|..
T Consensus 5 ~~LLeiL~CP~ck~~L~~~~-----------~~g~LvC~~c~~ 36 (67)
T 2jny_A 5 PQLLEVLACPKDKGPLRYLE-----------SEQLLVNERLNL 36 (67)
T ss_dssp GGGTCCCBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred HHHHHHhCCCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 35567889999976443211 245688998854
No 327
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=35.23 E-value=3.2 Score=33.91 Aligned_cols=39 Identities=18% Similarity=0.427 Sum_probs=24.2
Q ss_pred CCcccCCCCCCCCCHHHHHHhhhhhhc-CCCCccccCCccccc
Q 030808 44 RPDFPCPYCYEDFDIASLCSHLEDEHS-CESKVTVCPICSVKV 85 (171)
Q Consensus 44 r~~F~CPfC~e~fD~~~L~~H~~eeH~-~e~k~vVCPVCaa~~ 85 (171)
+-+|.||.|+.++...++.. .... .+..-..||-|...+
T Consensus 20 ~l~l~Cp~C~~~~~F~gv~~---~~~~~~~~sg~~C~~C~~~~ 59 (206)
T 3flo_B 20 TLELSCPSCDKRFPFGGIVS---SNYYRVSYNGLQCKHCEQLF 59 (206)
T ss_dssp CEEEECTTTCCEEEECSSSC---CSSEEEETTEEEETTTCCBC
T ss_pred eeEEECCCCCCccCCCCccc---CCCcccccccccCCCCCCcC
Confidence 44799999997444334432 1111 344567899998865
No 328
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=32.47 E-value=25 Score=31.36 Aligned_cols=24 Identities=17% Similarity=0.578 Sum_probs=21.0
Q ss_pred CcccCCCCCC-CCCHHHHHHhhhhh
Q 030808 45 PDFPCPYCYE-DFDIASLCSHLEDE 68 (171)
Q Consensus 45 ~~F~CPfC~e-~fD~~~L~~H~~ee 68 (171)
..-.||-||. .||+.++..-+++.
T Consensus 270 ~~ISCPtCGRt~~dl~~~~~~ie~~ 294 (366)
T 3noy_A 270 EIVACPTCGRIEVDLPKVVKEVQEK 294 (366)
T ss_dssp EEEECCCCTTCCSCHHHHHHHHHHH
T ss_pred EEEECCCCCCccccHHHHHHHHHHH
Confidence 3589999999 99999999988864
No 329
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=32.27 E-value=47 Score=24.64 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=22.0
Q ss_pred CcccCC---CCCC-CCCHHHHHHhhhhhhcCCCCcccc
Q 030808 45 PDFPCP---YCYE-DFDIASLCSHLEDEHSCESKVTVC 78 (171)
Q Consensus 45 ~~F~CP---fC~e-~fD~~~L~~H~~eeH~~e~k~vVC 78 (171)
+.|-|+ .|-+ -+++.+|..|+...|....+.|..
T Consensus 57 ~if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~~~~~~~ 94 (101)
T 3vk6_A 57 SLFMCSIVQGCKRTYLSQRDLQAHINHRHMRAGKPVTR 94 (101)
T ss_dssp GCCCCCCCCCCCCCCSSHHHHHHHHHHHTTTSCCCCCS
T ss_pred CEEECCCCCCHHHHhcCHHHHHHHHHHHhhhcCCCCCC
Confidence 456666 5666 677777777777777666555433
No 330
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=31.76 E-value=6.2 Score=24.87 Aligned_cols=39 Identities=31% Similarity=0.584 Sum_probs=20.9
Q ss_pred cccCCCCCCCCCHH---HHHHh-----hhhhhcCCCCccccCCccccch
Q 030808 46 DFPCPYCYEDFDIA---SLCSH-----LEDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 46 ~F~CPfC~e~fD~~---~L~~H-----~~eeH~~e~k~vVCPVCaa~~s 86 (171)
...||.|.+.+... .-|.| |..... .+...||+|...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~--~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWI--RQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHH--HHSCSTTTTCCCCC
T ss_pred CCCCeeCCccccCCcEecCCCCeeHHHHHHHHH--hCcCcCcCCChhhH
Confidence 45788888855431 11333 222211 12357999987764
No 331
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=31.30 E-value=2.5 Score=27.39 Aligned_cols=41 Identities=22% Similarity=0.408 Sum_probs=22.6
Q ss_pred CCcccCCCCCC-CCCHHHH---HHh------hhhhhcCCCCccccCCccccch
Q 030808 44 RPDFPCPYCYE-DFDIASL---CSH------LEDEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 44 r~~F~CPfC~e-~fD~~~L---~~H------~~eeH~~e~k~vVCPVCaa~~s 86 (171)
.....|+.|.+ .-|..-+ |.| |...-.. +...||+|...+.
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~--~~~~CPiCR~~i~ 55 (63)
T 2vje_B 5 NLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKK--AGASCPICKKEIQ 55 (63)
T ss_dssp GGGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHH--TTCBCTTTCCBCC
T ss_pred CcCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHH--hCCcCCCcCchhh
Confidence 34567999987 3343222 333 3332221 2358999988763
No 332
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=29.91 E-value=22 Score=27.79 Aligned_cols=27 Identities=30% Similarity=0.805 Sum_probs=18.6
Q ss_pred cccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCcccc
Q 030808 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (171)
Q Consensus 46 ~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~ 84 (171)
.=+||-|+.++. ..+....|||-|+--
T Consensus 27 lP~CP~C~seyt------------YeDg~l~vCPeC~hE 53 (138)
T 2akl_A 27 LPPCPQCNSEYT------------YEDGALLVCPECAHE 53 (138)
T ss_dssp SCCCTTTCCCCC------------EECSSSEEETTTTEE
T ss_pred CCCCCCCCCcce------------EecCCeEECCccccc
Confidence 457999976553 124556899999764
No 333
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=29.02 E-value=12 Score=24.47 Aligned_cols=35 Identities=20% Similarity=0.519 Sum_probs=23.9
Q ss_pred CcccCCCCCC-CCCHHHHHHhhhhhhcCCCCccccCCccccchhhHH
Q 030808 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKVARDML 90 (171)
Q Consensus 45 ~~F~CPfC~e-~fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~s~d~l 90 (171)
....||.|+. ++.. . .+...+||..|-..+..+.+
T Consensus 10 ~~~~Cp~C~~~~lv~---------D--~~~ge~vC~~CGlVl~e~~i 45 (58)
T 1dl6_A 10 PRVTCPNHPDAILVE---------D--YRAGDMICPECGLVVGDRVI 45 (58)
T ss_dssp SCCSBTTBSSSCCEE---------C--SSSCCEECTTTCCEECCSCC
T ss_pred ccccCcCCCCCceeE---------e--CCCCeEEeCCCCCEEecccc
Confidence 3457999987 4311 1 24567999999887776654
No 334
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=29.00 E-value=13 Score=24.37 Aligned_cols=31 Identities=19% Similarity=0.532 Sum_probs=20.7
Q ss_pred CCCCCCcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccC--Cccc
Q 030808 40 EDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCP--ICSV 83 (171)
Q Consensus 40 ddd~r~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCP--VCaa 83 (171)
|.++.....||.|...+.... ...+|+ -|..
T Consensus 4 d~~lL~iL~CP~c~~~L~~~~-------------~~L~C~~~~c~~ 36 (56)
T 2kpi_A 4 EAGLLEILACPACHAPLEERD-------------AELICTGQDCGL 36 (56)
T ss_dssp CCSCTTSCCCSSSCSCEEEET-------------TEEEECSSSCCC
T ss_pred CHHHHhheeCCCCCCcceecC-------------CEEEcCCcCCCc
Confidence 345677899999977544322 567888 7743
No 335
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=28.13 E-value=6.8 Score=28.29 Aligned_cols=10 Identities=40% Similarity=0.916 Sum_probs=8.3
Q ss_pred CcccCCCCCC
Q 030808 45 PDFPCPYCYE 54 (171)
Q Consensus 45 ~~F~CPfC~e 54 (171)
..|.||||..
T Consensus 29 ~dy~Cp~C~~ 38 (184)
T 4dvc_A 29 FSFYCPHCNT 38 (184)
T ss_dssp ECTTCHHHHH
T ss_pred ECCCCHhHHH
Confidence 3699999976
No 336
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=28.04 E-value=29 Score=23.46 Aligned_cols=50 Identities=24% Similarity=0.320 Sum_probs=30.9
Q ss_pred CcccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCccccchhhHHhhhhhccc
Q 030808 45 PDFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHG 98 (171)
Q Consensus 45 ~~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~s~d~l~HL~~qH~ 98 (171)
..|.|+.|+.. -....|..|... |..+ ++-.|.-|.. ..+++.|....-+
T Consensus 24 kpy~C~~C~k~F~~~~~L~~H~~~-Ht~e-kp~~C~~~~~--~~~~~~~~~~~~~ 74 (88)
T 1x6f_A 24 STYQCKHCDSKLQSTAELTSHLNI-HNEE-FQKRAKRQER--RKQLLSKQKYADG 74 (88)
T ss_dssp SCEECSSSCCEESSHHHHHHHHHH-HHHH-HHHHCCCCSC--CCCCCCCCCCCCC
T ss_pred CCCcCCCCCCEeCCHHHHHHHHHH-hCCC-CCcccchhhh--HHHHHhhhccccc
Confidence 35999999994 456778889764 5432 3456766643 3345555444333
No 337
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=27.72 E-value=6.7 Score=30.13 Aligned_cols=20 Identities=20% Similarity=0.532 Sum_probs=14.9
Q ss_pred CcccCCCCCC-CCCHHHHHHh
Q 030808 45 PDFPCPYCYE-DFDIASLCSH 64 (171)
Q Consensus 45 ~~F~CPfC~e-~fD~~~L~~H 64 (171)
..|.||||.. .-.+..+.+.
T Consensus 22 ~D~~Cp~C~~~~~~~~~~l~~ 42 (182)
T 3gn3_A 22 LEPTCPFSVKAFFKLDDLLAQ 42 (182)
T ss_dssp ECTTCHHHHHHHTTHHHHHHH
T ss_pred ECCCCHhHHHHHHHHHHHHHH
Confidence 4699999998 6666666543
No 338
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=27.60 E-value=18 Score=24.91 Aligned_cols=10 Identities=40% Similarity=0.846 Sum_probs=7.9
Q ss_pred CcccCCCCCC
Q 030808 45 PDFPCPYCYE 54 (171)
Q Consensus 45 ~~F~CPfC~e 54 (171)
....||||+.
T Consensus 39 g~~~CpYCg~ 48 (67)
T 2jrr_A 39 GWVECPYCDC 48 (67)
T ss_dssp SEEEETTTTE
T ss_pred CeEECCCCCC
Confidence 4678999986
No 339
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=27.47 E-value=9.7 Score=25.06 Aligned_cols=38 Identities=18% Similarity=0.517 Sum_probs=22.6
Q ss_pred CCcccCCCCCCCC-CHHH-------HHHhhhhhhcCCCCccccCCccccchh
Q 030808 44 RPDFPCPYCYEDF-DIAS-------LCSHLEDEHSCESKVTVCPICSVKVAR 87 (171)
Q Consensus 44 r~~F~CPfC~e~f-D~~~-------L~~H~~eeH~~e~k~vVCPVCaa~~s~ 87 (171)
...+.||.|.+.+ +... +|..|.... ..||+|...+..
T Consensus 22 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~------~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 22 QEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAV------DKCPMCYTVITF 67 (74)
T ss_dssp HHHTBCTTTSSSBCCEEEETTCCBCCCHHHHTTC------SBCTTTCCBCSE
T ss_pred ccCCCCCCCCCCCCCEEEcCCCChhHHHHhhhcC------ccCCCcCcCccC
Confidence 3468899998843 3332 222232221 689999887643
No 340
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=27.45 E-value=20 Score=25.58 Aligned_cols=12 Identities=25% Similarity=0.697 Sum_probs=9.4
Q ss_pred CcccCCCCCCCC
Q 030808 45 PDFPCPYCYEDF 56 (171)
Q Consensus 45 ~~F~CPfC~e~f 56 (171)
..-.||||+.-|
T Consensus 52 g~~~CpYCg~~f 63 (80)
T 2jvm_A 52 GFVECGYCDRRY 63 (80)
T ss_dssp CEEECSSSSCEE
T ss_pred CeEECCCCCCEE
Confidence 468899999844
No 341
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=26.63 E-value=14 Score=27.42 Aligned_cols=37 Identities=22% Similarity=0.462 Sum_probs=0.0
Q ss_pred cCCCCCCCCCHHH--------------------HHHhhhhhhcCCC---CccccCCcccc
Q 030808 48 PCPYCYEDFDIAS--------------------LCSHLEDEHSCES---KVTVCPICSVK 84 (171)
Q Consensus 48 ~CPfC~e~fD~~~--------------------L~~H~~eeH~~e~---k~vVCPVCaa~ 84 (171)
.|+.|-++|+... -|.|.--.|+.+. .+..||+|...
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~ 109 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 109 (117)
T ss_dssp ------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCe
Confidence 6888887765421 3666666666543 35689999764
No 342
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.22 E-value=2 Score=28.39 Aligned_cols=38 Identities=21% Similarity=0.561 Sum_probs=22.7
Q ss_pred CCcccCCCCCCCC-CHHH-------HHHhhhhhhcCCCCccccCCccccchh
Q 030808 44 RPDFPCPYCYEDF-DIAS-------LCSHLEDEHSCESKVTVCPICSVKVAR 87 (171)
Q Consensus 44 r~~F~CPfC~e~f-D~~~-------L~~H~~eeH~~e~k~vVCPVCaa~~s~ 87 (171)
...+.||.|.+.+ +..- +|..|.. +...||+|...+..
T Consensus 23 ~~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~~------~~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 23 QEEKLCKICMDRNIAIVFVPCGHLVTCKQCAE------AVDKCPMCYTVITF 68 (75)
T ss_dssp HHHHSCSSSCSSCCCBCCSSSCCCCBCHHHHH------HCSBCTTTCCBCCC
T ss_pred CCCCCCCcCCCCCCCEEEecCCCHHHHHHHhh------CCCCCccCCceecC
Confidence 4568899998733 3322 2233332 23679999887643
No 343
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=26.13 E-value=26 Score=22.61 Aligned_cols=12 Identities=25% Similarity=0.525 Sum_probs=8.2
Q ss_pred CcccCCCCCCCC
Q 030808 45 PDFPCPYCYEDF 56 (171)
Q Consensus 45 ~~F~CPfC~e~f 56 (171)
..-.|++||+.+
T Consensus 17 ~~~~C~~CG~~i 28 (49)
T 2l8e_A 17 NLLKCEYCGKYA 28 (49)
T ss_dssp SEEECTTTCCEE
T ss_pred CCCcChhccCcc
Confidence 345699998843
No 344
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=25.26 E-value=21 Score=20.48 Aligned_cols=22 Identities=27% Similarity=0.600 Sum_probs=15.7
Q ss_pred cccCC--CCCCCCC-HHHHHHhhhh
Q 030808 46 DFPCP--YCYEDFD-IASLCSHLED 67 (171)
Q Consensus 46 ~F~CP--fC~e~fD-~~~L~~H~~e 67 (171)
.|.|+ .|++.|. ...|..|...
T Consensus 18 ~~~C~~~~C~k~F~~~~~L~~H~~~ 42 (47)
T 1ncs_A 18 TFECLFPGCTKTFKRRYNIRSHIQT 42 (47)
T ss_dssp EEECCCTTCCCEECSSSSHHHHHHH
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH
Confidence 59996 5999554 4668888654
No 345
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=25.19 E-value=23 Score=26.01 Aligned_cols=10 Identities=20% Similarity=0.494 Sum_probs=8.6
Q ss_pred CcccCCCCCC
Q 030808 45 PDFPCPYCYE 54 (171)
Q Consensus 45 ~~F~CPfC~e 54 (171)
..|.||||..
T Consensus 30 ~d~~Cp~C~~ 39 (195)
T 2znm_A 30 FGYFCVHCHH 39 (195)
T ss_dssp ECTTSCCTTS
T ss_pred ECCCChhHHH
Confidence 3699999988
No 346
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=24.37 E-value=36 Score=28.82 Aligned_cols=41 Identities=15% Similarity=0.460 Sum_probs=27.2
Q ss_pred CCCCcccCCCCCCC-CCHHHHHHhhhhhhcCCCCccccCCccccchhhHHh
Q 030808 42 DVRPDFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLS 91 (171)
Q Consensus 42 d~r~~F~CPfC~e~-fD~~~L~~H~~eeH~~e~k~vVCPVCaa~~s~d~l~ 91 (171)
++.....||.|+.. =+ +..+ .+....||.-|-..+..+.+.
T Consensus 17 ~~~~~~~Cp~Cg~~~~~-------iv~D--~~~G~~vC~~CG~Vl~e~~id 58 (345)
T 3k7a_M 17 NLNIVLTCPECKVYPPK-------IVER--FSEGDVVCALCGLVLSDKLVD 58 (345)
T ss_dssp CCCCCCCCSTTCCSCCC-------CCCC--SSSCSCCCSSSCCCCCCCCCC
T ss_pred cccCCCcCcCCCCCCCc-------eEEE--CCCCCEecCCCCeEccccccc
Confidence 44557789999873 11 1112 346688999999988766554
No 347
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=23.66 E-value=20 Score=31.39 Aligned_cols=31 Identities=16% Similarity=0.189 Sum_probs=19.3
Q ss_pred CcccCCCCCCCCCHHHHHHhhhhhhcCCCCccccCCcc-ccchhh
Q 030808 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICS-VKVARD 88 (171)
Q Consensus 45 ~~F~CPfC~e~fD~~~L~~H~~eeH~~e~k~vVCPVCa-a~~s~d 88 (171)
+.-.|||||..+. .+-+.-+||||- +.+|.+
T Consensus 286 ~~v~Cp~cgA~y~-------------~~~kG~lC~vC~l~~IG~~ 317 (325)
T 3mv2_A 286 PSVSDPLTGSKYV-------------ITEKDKIDRIAMISKIGAP 317 (325)
T ss_dssp CEEECTTTCCEEE-------------GGGTTSBCSSSSCBBTTCC
T ss_pred CCccCCCCCCeec-------------hhhCCCCCCCCcCcccCCC
Confidence 3568999987432 123456999994 445544
No 348
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=22.39 E-value=13 Score=23.90 Aligned_cols=15 Identities=33% Similarity=0.820 Sum_probs=12.3
Q ss_pred hhhhcCCcccchhhc
Q 030808 148 HQHICGKQGTAFWHQ 162 (171)
Q Consensus 148 ~~~~~~~~~~~~~~~ 162 (171)
..+.|+++|..+|.+
T Consensus 36 ~R~~C~kCG~t~~~~ 50 (50)
T 3j20_Y 36 DRWACGKCGYTEWKK 50 (50)
T ss_dssp SEEECSSSCCEEECC
T ss_pred CeEECCCCCCEEECc
Confidence 467899999999864
No 349
>2bai_A Genome polyprotein; zinc finger domain, viruses, cardiovirus, structural genomics, PSI, protein structure initiative; NMR {Mengo virus} SCOP: g.87.1.1
Probab=21.96 E-value=10 Score=22.93 Aligned_cols=10 Identities=40% Similarity=0.840 Sum_probs=7.8
Q ss_pred cccCCccccc
Q 030808 76 TVCPICSVKV 85 (171)
Q Consensus 76 vVCPVCaa~~ 85 (171)
-+||+|.+.-
T Consensus 17 ~~CP~CtA~d 26 (32)
T 2bai_A 17 EECPKCSALQ 26 (32)
T ss_dssp GGHHHHHCSS
T ss_pred ccccccceee
Confidence 6899998753
No 350
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=21.95 E-value=17 Score=30.34 Aligned_cols=25 Identities=28% Similarity=0.499 Sum_probs=22.5
Q ss_pred CCCcccCCCCCCCCCHHHHHHhhhh
Q 030808 43 VRPDFPCPYCYEDFDIASLCSHLED 67 (171)
Q Consensus 43 ~r~~F~CPfC~e~fD~~~L~~H~~e 67 (171)
.++-|.|-.|++-+|+..|..|+..
T Consensus 151 FWQFYKCe~CgKYvDId~~~~Hlk~ 175 (226)
T 2czr_A 151 FWQFYKCEECGKYVDIENLEAHLRE 175 (226)
T ss_dssp EEEEEECTTTCCEEEGGGHHHHHHT
T ss_pred EEEEEehhhcCceecHHHHHHHHHH
Confidence 4778999999999999999999864
No 351
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=21.93 E-value=31 Score=25.34 Aligned_cols=40 Identities=15% Similarity=0.352 Sum_probs=28.7
Q ss_pred CcccCCCCCC--CCCH---HHHHHhhhhhhcCCCC------ccccCCcccc
Q 030808 45 PDFPCPYCYE--DFDI---ASLCSHLEDEHSCESK------VTVCPICSVK 84 (171)
Q Consensus 45 ~~F~CPfC~e--~fD~---~~L~~H~~eeH~~e~k------~vVCPVCaa~ 84 (171)
.-|-|--||+ +++. ..+...+...+.++.. .++||-|...
T Consensus 86 ~HliC~~Cg~v~~~~~~~~~~~~~~~~~~~gf~i~~~~l~~~GiC~~C~~~ 136 (139)
T 3mwm_A 86 HHLVCRACGKAVEVEGPAVEKWAEAIAAEHGYVNVAHTVEIFGTCADCAGA 136 (139)
T ss_dssp EEEEETTTCCEEEECCHHHHHHHHHHHHHTTCCSCCCCCEEEECCHHHHCC
T ss_pred cEEEECCCCCEeecccccHHHHHHHHHHhCCCEEEeeEEEEEEEChHHhCc
Confidence 3589999999 7763 4456677777777544 2789999764
No 352
>3al0_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima}
Probab=20.93 E-value=18 Score=33.15 Aligned_cols=17 Identities=18% Similarity=0.690 Sum_probs=13.7
Q ss_pred cCCCCccccCCccccch
Q 030808 70 SCESKVTVCPICSVKVA 86 (171)
Q Consensus 70 ~~e~k~vVCPVCaa~~s 86 (171)
..+++.-|||||..+|+
T Consensus 31 g~~pNt~vcpv~lg~PG 47 (482)
T 3al0_B 31 ELPPNTAICPVCTGQPG 47 (482)
T ss_dssp TCCTTSSCCTTTTTCTT
T ss_pred cCCCcCccCceecCCCC
Confidence 34688899999999963
No 353
>3h0l_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_B 3h0r_B*
Probab=20.93 E-value=17 Score=33.20 Aligned_cols=20 Identities=30% Similarity=0.597 Sum_probs=15.6
Q ss_pred hhhcCCCCccccCCccccch
Q 030808 67 DEHSCESKVTVCPICSVKVA 86 (171)
Q Consensus 67 eeH~~e~k~vVCPVCaa~~s 86 (171)
.+...+++.-|||||..+|+
T Consensus 29 ~~fg~~PNt~v~pv~lg~PG 48 (478)
T 3h0l_B 29 VEFGAEPNTNVCPVCLGMPG 48 (478)
T ss_dssp CCTTCCTTCSCCTTTTTCTT
T ss_pred cccCCCCccccCccccCCCC
Confidence 33456788899999999973
No 354
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=20.07 E-value=6.7 Score=28.32 Aligned_cols=10 Identities=30% Similarity=0.673 Sum_probs=7.6
Q ss_pred ccccCCcccc
Q 030808 75 VTVCPICSVK 84 (171)
Q Consensus 75 ~vVCPVCaa~ 84 (171)
+..||+|...
T Consensus 89 ~~~CP~Cr~~ 98 (106)
T 3dpl_R 89 RQVCPLDNRE 98 (106)
T ss_dssp CSBCSSSCSB
T ss_pred CCcCcCCCCc
Confidence 4679999765
Done!