Citrus Sinensis ID: 030810

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-
Protein Sequence
MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSSGGTGKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccEEEEccccccccccccccHHHHHHHHHHHHHcccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccEcccccEEEcccccEEccEcccccccccccHHHHHHHHHHHHccEEEccccccc
Coil and Loop (DISEMBL)
meshdetgcqapegpilcvnncgffgsaATMNMCSKCHKAMILNQEQAQLAASSIgsivhgssggtgkepivagsvdlqvgpveikkfsmepssgssfgfagvkakegpkrcttcnkrvgltgfncrcgnlfcavhrysdkhgcpfdYRTAAREAIAKanpvvkaekldki
Flexible Loop (DISEMBL)
meshdetgcqapegpILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSSGGTGKEPIVAGSVDLQVGPVEIKKfsmepssgssfgfagvkakegpkrCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAkanpvvkaekldki
Low Complexity Region (SEG)
MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAssigsivhgssggtgKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI
Disordered region (IsUnstruct)
*************GPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIV***********IVAGSVDLQVGPV******************GV*****PKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIA**************
Disordered Region (DISOPRED)
*******************NNCGFFGSAATMNM*************************************************************************EGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI
Disordered Region (DISEMBL)
*********QAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSSGGTGKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI
Disordered Region (DISPRO)
************EGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQ*************************************************************PKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKL*K*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSSGGTGKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	171	2.2.26 [Sep-21-2011]
A3BDI8	171	Zinc finger A20 and AN1 d	yes	no	0.970	0.970	0.719	2e-66
A2YEZ6	171	Zinc finger A20 and AN1 d	N/A	no	0.970	0.970	0.719	2e-66
Q6H7P8	173	Zinc finger A20 and AN1 d	no	no	0.970	0.959	0.710	3e-63
Q8H0X0	173	Zinc finger A20 and AN1 d	yes	no	0.964	0.953	0.596	3e-43
Q9SJM6	161	Zinc finger A20 and AN1 d	no	no	0.923	0.981	0.458	5e-34
Q852K5	160	Zinc finger A20 and AN1 d	no	no	0.877	0.937	0.455	3e-33
Q7Y1W9	161	Zinc finger A20 and AN1 d	no	no	0.900	0.956	0.433	1e-32
Q94B40	170	Zinc finger A20 and AN1 d	no	no	0.976	0.982	0.446	6e-31
Q6NNI8	168	Zinc finger A20 and AN1 d	no	no	0.964	0.982	0.411	4e-29
Q9SZ69	175	Zinc finger A20 and AN1 d	no	no	0.888	0.868	0.391	7e-28

>sp|A3BDI8|SAP8_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1

 Score =  250 bits (639), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 123/171 (71%), Positives = 140/171 (81%), Gaps = 5/171 (2%)

Query: 4   HDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSS 63
           H ETGCQ PEGPILC+NNCGFFGSAATMNMCSKCHK MI+ QEQA+LAASSI SIV+G  
Sbjct: 3   HKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNG-- 60

Query: 64  GGTGKEPIVAGSVDLQVGPVEIKKFSMEPS--SGSSFGF-AGVKAKEGPKRCTTCNKRVG 120
           G +GKEPI+AG  ++ V  VE+K    +P+  +G S G     K +EGP RC+TC KRVG
Sbjct: 61  GDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVG 120

Query: 121 LTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           LTGFNCRCGNL+CA+HRYSDKH C FDYRTAAR+AIAKANPVVKAEKLDKI
Sbjct: 121 LTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171

May be involved in environmental stress response.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2

 Score =  250 bits (639), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 123/171 (71%), Positives = 140/171 (81%), Gaps = 5/171 (2%)

Query: 4   HDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSS 63
           H ETGCQ PEGPILC+NNCGFFGSAATMNMCSKCHK MI+ QEQA+LAASSI SIV+G  
Sbjct: 3   HKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNG-- 60

Query: 64  GGTGKEPIVAGSVDLQVGPVEIKKFSMEPS--SGSSFGF-AGVKAKEGPKRCTTCNKRVG 120
           G +GKEPI+AG  ++ V  VE+K    +P+  +G S G     K +EGP RC+TC KRVG
Sbjct: 61  GDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVG 120

Query: 121 LTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           LTGFNCRCGNL+CA+HRYSDKH C FDYRTAAR+AIAKANPVVKAEKLDKI
Sbjct: 121 LTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171

May be involved in environmental stress response.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q6H7P8|SAP4_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1

 Score =  240 bits (613), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 123/173 (71%), Positives = 138/173 (79%), Gaps = 7/173 (4%)

Query: 4   HDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSS 63
           H E GCQ PEGPILC+NNCGFFGSAATMNMCSKCHK MI+ +EQA+LAASSI SIV+G  
Sbjct: 3   HKEAGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCD 62

Query: 64  GGTGKEPIVA--GSVDLQVGPVEIKKFSMEPS--SGSSFGFAGV-KAKEGPKRCTTCNKR 118
           GG  KE IVA  GS  + V  VE K   ++P+  +G+S   A V K KEGP RC TC KR
Sbjct: 63  GG--KEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKR 120

Query: 119 VGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           VGLTGFNCRCGN++CA+HRYSDKH C FDYRTAAR+AIAKANPVVKAEKLDKI
Sbjct: 121 VGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8H0X0|SAP2_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2

 Score =  174 bits (440), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/176 (59%), Positives = 117/176 (66%), Gaps = 11/176 (6%)

Query: 3   SHDETGCQAP-EGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHG 61
            HD+TGCQ+P EGP LC NNCGFFGSAATMNMCSKCHK M+  QEQ   A  +       
Sbjct: 2   DHDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQG--AKFASAVSGTS 59

Query: 62  SSGGTGKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKE------GPKRCTTC 115
           SS    KE   A  VD++   VE    S++PSS      A V A E      GP RCTTC
Sbjct: 60  SSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVV--AEVVAPEEAAKPKGPSRCTTC 117

Query: 116 NKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           NKRVGLTGF CRCG+LFC  HRY+D H C F+Y  AA+EAIAKANPVVKAEKLDKI
Sbjct: 118 NKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJM6|SAP4_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1

 Score =  143 bits (361), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 97/168 (57%), Gaps = 10/168 (5%)

Query: 5   DETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSSG 64
           +E  C+ PEG  LCVNNCGFFGS+ATMN+CS C+  + L Q+Q     +S+ S V  S  
Sbjct: 3   EEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQ----ASMKSTVESSLS 58

Query: 65  GTGKEPIVAGSVDLQVGPVEIKKFS-MEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTG 123
                P++A  ++     +EI      E               + P RCT C KRVGLTG
Sbjct: 59  -----PVIAPVLENYAAELEIPTTKKTEEKKPIQIPTEQPSPPQRPNRCTVCRKRVGLTG 113

Query: 124 FNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           F CRCG  FC  HRY + HGC FD+++A RE IAKANP+V A KL KI
Sbjct: 114 FMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q852K5|SAP6_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1

 Score =  140 bits (354), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/167 (45%), Positives = 95/167 (56%), Gaps = 17/167 (10%)

Query: 5   DETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSSG 64
           +ETG   PE PILCVNNCGFFGS  T NMCSKC++  +    +A+  A+ +      S  
Sbjct: 11  EETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTV----KAKTVATVVEKKPLASLS 66

Query: 65  GTGKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGF 124
            T   P+V    D   G V   K  ME  +           K    RC +C K+VGLTGF
Sbjct: 67  ST---PLVTEVTDGGSGSVADGKQVMEEDT----------PKPPSNRCLSCRKKVGLTGF 113

Query: 125 NCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
            CRCG  FC++HRY+D H C FDY+   RE IAK NP+VKA+K+ KI
Sbjct: 114 KCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7Y1W9|SAP9_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1

 Score =  138 bits (348), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 98/173 (56%), Gaps = 19/173 (10%)

Query: 1   MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSI--GSI 58
            ++  E     PE PILCVNNCGFFGS+ T NMCSKC++  +   +   +AA  +   + 
Sbjct: 6   WKNESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVVEKKAF 62

Query: 59  VHGSSGGTGKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKR 118
              SS  T  EP  A   ++    VE K+ + EP    S             RC +C K+
Sbjct: 63  TPASSSKTPLEP--AKPDEVPAAAVEDKQAAQEPPKPPS------------NRCLSCRKK 108

Query: 119 VGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           VGLTGF CRCG  FC+ HRY++ H C FDY+ A R+ IAK NPVV AEK++KI
Sbjct: 109 VGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161

May be involved in environmental stress response.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q94B40|SAP6_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2

 Score =  133 bits (334), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 100/168 (59%), Gaps = 1/168 (0%)

Query: 5   DETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAS-SIGSIVHGSS 63
           +E  CQ PE   LCVNNCGF GS+ATMN+CS C+  + L Q+Q   +   ++ S +  S 
Sbjct: 3   EEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVSP 62

Query: 64  GGTGKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTG 123
             +    I +  +   +    +K    E  +  S        ++ P RCTTC KRVGLTG
Sbjct: 63  PSSSSSEISSPIIPPLLKNPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLTG 122

Query: 124 FNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           F CRCG +FC VHRY + HGC +D+++A RE IAKANP+VKA KL KI
Sbjct: 123 FKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6NNI8|SAP1_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1

 Score =  127 bits (318), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 98/170 (57%), Gaps = 5/170 (2%)

Query: 2   ESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHG 61
           E +D T   +P  P LCV  CGFFGS + MN+CSKC++ +   +EQ   A +++   ++ 
Sbjct: 4   EQNDSTSF-SPSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNP 62

Query: 62  SSGGTGKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGL 121
           +   T  +     S ++  G +     S     G S        K    RC +CNK+VG+
Sbjct: 63  NKPKTQPQ----QSQEITQGVLGSGSSSSSTRGGDSAAAPLDPPKSTATRCLSCNKKVGV 118

Query: 122 TGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           TGF CRCG+ FC  HRY + H C FD++  AREAIAKANPVVKA+K+D+I
Sbjct: 119 TGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SZ69|SAP7_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1

 Score =  123 bits (308), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 99/171 (57%), Gaps = 19/171 (11%)

Query: 12  PEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSSGGTGKEPI 71
           P  P LC N CGFFGS + MN+CSKC++++   ++Q  +A +++ + +   S       I
Sbjct: 13  PTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSI----I 68

Query: 72  VAGSVDLQVGPVEIKKFSMEP----SSGSSFGFAGVKAKEGP-------KRCTTCNKRVG 120
             G    Q  P+EIK   +E     +  SS   A  + +  P        RC +CNK+VG
Sbjct: 69  APG----QKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVG 124

Query: 121 LTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           + GF C+CG+ FC  HRY +KH C FD++   R+AIAKANP+VKA+K+ +I
Sbjct: 125 VMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175

May be involved in environmental stress response.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
119367488	171	putative multiple stress-responsive zinc	1.0	1.0	0.994	4e-95
225441720	172	PREDICTED: zinc finger A20 and AN1 domai	1.0	0.994	0.808	7e-76
224139844	170	predicted protein [Populus trichocarpa]	0.994	1.0	0.807	8e-76
224120188	171	predicted protein [Populus trichocarpa]	1.0	1.0	0.783	1e-74
238575930	172	hypothetical protein MPER_13207 [Monilio	1.0	0.994	0.726	1e-67
351722295	174	uncharacterized protein LOC100499857 [Gl	0.988	0.971	0.734	1e-66
217071130	172	unknown [Medicago truncatula] gi|3884941	0.976	0.970	0.725	9e-66
254681442	169	zinc finger protein [Gossypium arboreum]	0.982	0.994	0.732	2e-65
351727441	176	uncharacterized protein LOC100500070 [Gl	0.988	0.960	0.737	3e-65
224053364	172	predicted protein [Populus trichocarpa]	0.982	0.976	0.735	7e-65

>gi|119367488|gb|ABL67658.1| putative multiple stress-responsive zinc-finger protein [Citrus hybrid cultivar]

 Score =  352 bits (902), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 170/171 (99%), Positives = 171/171 (100%)

Query: 1   MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVH 60
           MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVH
Sbjct: 1   MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVH 60

Query: 61  GSSGGTGKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVG 120
           GSSGGTGKEPI+AGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVG
Sbjct: 61  GSSGGTGKEPIIAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVG 120

Query: 121 LTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           LTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI
Sbjct: 121 LTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171

Source: Citrus hybrid cultivar

Species: Citrus hybrid cultivar

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441720|ref|XP_002283046.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8 isoform 1 [Vitis vinifera] gi|225441722|ref|XP_002283050.1| PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8 isoform 2 [Vitis vinifera] gi|147783026|emb|CAN65596.1| hypothetical protein VITISV_027161 [Vitis vinifera]

 Score =  288 bits (736), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 139/172 (80%), Positives = 149/172 (86%), Gaps = 1/172 (0%)

Query: 1   MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVH 60
           MESHDETGCQAPEGPILC+NNCGFFGSAATMNMCSKCHK + L QEQA+LAASSIGSIV+
Sbjct: 1   MESHDETGCQAPEGPILCINNCGFFGSAATMNMCSKCHKDLALKQEQAKLAASSIGSIVN 60

Query: 61  GSSGGTGKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFG-FAGVKAKEGPKRCTTCNKRV 119
           GSS G GKEPIVAG+VD+Q GPVE+K  S E S+ SS       K KEGP RCT C KRV
Sbjct: 61  GSSSGNGKEPIVAGTVDVQAGPVEVKAISAEASNDSSSNQIIESKVKEGPNRCTACRKRV 120

Query: 120 GLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           GLTGFNC+CGNLFCAVHRYSDKH CPFDYRTAAR+AIAKANPVVKAEKLDKI
Sbjct: 121 GLTGFNCKCGNLFCAVHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 172

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139844|ref|XP_002323304.1| predicted protein [Populus trichocarpa] gi|118486021|gb|ABK94854.1| unknown [Populus trichocarpa] gi|118489161|gb|ABK96387.1| unknown [Populus trichocarpa x Populus deltoides] gi|222867934|gb|EEF05065.1| predicted protein [Populus trichocarpa]

 Score =  287 bits (735), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 138/171 (80%), Positives = 151/171 (88%), Gaps = 1/171 (0%)

Query: 1   MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVH 60
           MESHDETGCQAPEGPILC+NNCGFFGSAATMNMCSKCHK +ILNQ+QAQLAASSI SIV+
Sbjct: 1   MESHDETGCQAPEGPILCINNCGFFGSAATMNMCSKCHKDIILNQQQAQLAASSIESIVN 60

Query: 61  GSSGGTGKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVG 120
           G+S G GKEP+VAG+VD+Q  PVE+K  S EPS  SS   + +KAKEGP RCT C KRVG
Sbjct: 61  GNSSGNGKEPVVAGAVDVQAAPVEVKIISTEPSIASS-KPSEMKAKEGPSRCTACRKRVG 119

Query: 121 LTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           LTGF CRCGNLFCA+HRYSDKH CPFDYRTAAR+AIAKANPVVKAEKLDKI
Sbjct: 120 LTGFGCRCGNLFCAIHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 170

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120188|ref|XP_002330986.1| predicted protein [Populus trichocarpa] gi|222872916|gb|EEF10047.1| predicted protein [Populus trichocarpa]

 Score =  283 bits (725), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 134/171 (78%), Positives = 150/171 (87%)

Query: 1   MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVH 60
           MESHDETGCQAPEGPILC+NNCGFFGSAATMNMCSKCHK +IL Q+QAQLAASSI SIV+
Sbjct: 1   MESHDETGCQAPEGPILCINNCGFFGSAATMNMCSKCHKDIILKQQQAQLAASSIESIVN 60

Query: 61  GSSGGTGKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVG 120
           G+S G GKEP+VA +VD+Q  PVE+K  S EPSS +S   + +KAKEGP RCT+C KRVG
Sbjct: 61  GNSSGNGKEPVVAVAVDVQSAPVEVKIISTEPSSATSSKPSEMKAKEGPSRCTSCRKRVG 120

Query: 121 LTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           LTGF+CRCGNLFCAVHRYSDKH C FDYR AAR+AIAKANPVV+AEKLDKI
Sbjct: 121 LTGFSCRCGNLFCAVHRYSDKHNCRFDYRNAARDAIAKANPVVRAEKLDKI 171

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|238575930|ref|XP_002387848.1| hypothetical protein MPER_13207 [Moniliophthora perniciosa FA553] gi|215448667|gb|EEB88778.1| hypothetical protein MPER_13207 [Moniliophthora perniciosa FA553]

 Score =  260 bits (665), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 125/172 (72%), Positives = 141/172 (81%), Gaps = 1/172 (0%)

Query: 1   MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVH 60
           MESHDETGCQAP+GPILC+NNCGFFGSAAT NMCSKCHK +IL QEQAQ AASSI SIV+
Sbjct: 1   MESHDETGCQAPKGPILCINNCGFFGSAATANMCSKCHKDVILKQEQAQAAASSIESIVN 60

Query: 61  GSSGGTGKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFG-FAGVKAKEGPKRCTTCNKRV 119
            SS   GK P+    +DLQ G V+ K  S EPS+GSS      +K  +GPKRCTTC +RV
Sbjct: 61  RSSNENGKGPVATEKLDLQAGLVDAKVISTEPSAGSSSSKDVDMKVSDGPKRCTTCQRRV 120

Query: 120 GLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           GLTGFNC+CGNLFC+ HRYSD HGCPFDYRTAAR+AIAKANPVV+A+KLDKI
Sbjct: 121 GLTGFNCKCGNLFCSTHRYSDIHGCPFDYRTAARDAIAKANPVVRADKLDKI 172

Source: Moniliophthora perniciosa FA553

Species: Moniliophthora perniciosa

Genus: Moniliophthora

Family: Marasmiaceae

Order: Agaricales

Class: Agaricomycetes

Phylum: Basidiomycota

Superkingdom: Eukaryota

>gi|351722295|ref|NP_001236983.1| uncharacterized protein LOC100499857 [Glycine max] gi|255627175|gb|ACU13932.1| unknown [Glycine max]

 Score =  257 bits (656), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 127/173 (73%), Positives = 147/173 (84%), Gaps = 4/173 (2%)

Query: 3   SHDETGCQAP-EGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHG 61
            HD+TGCQAP EGPILC+NNCGFFGSAATMNMCSKCHK ++L QEQA+LAASSIG+I++G
Sbjct: 2   DHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDILLKQEQAKLAASSIGNIMNG 61

Query: 62  SSGGTGKEPIVAGS--VDLQVGPVEIKKFSMEPSSGS-SFGFAGVKAKEGPKRCTTCNKR 118
           SS  T KEP+VA +  +D+ V PVE K  S++P  GS   G    K K+GPKRC++CNKR
Sbjct: 62  SSSSTEKEPVVAAAANIDIPVIPVEPKTVSVQPLFGSGPEGSVEAKPKDGPKRCSSCNKR 121

Query: 119 VGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           VGLTGFNCRCG+LFCAVHRYSDKH CPFDYRTAA++AIAKANPVVKAEKLDKI
Sbjct: 122 VGLTGFNCRCGDLFCAVHRYSDKHNCPFDYRTAAQDAIAKANPVVKAEKLDKI 174

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217071130|gb|ACJ83925.1| unknown [Medicago truncatula] gi|388494106|gb|AFK35119.1| unknown [Medicago truncatula] gi|388510554|gb|AFK43343.1| unknown [Medicago truncatula]

 Score =  254 bits (649), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 124/171 (72%), Positives = 142/171 (83%), Gaps = 4/171 (2%)

Query: 4   HDETGCQA-PEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGS 62
           HD+TGC+A PEGP+LC+NNCGFFGSAATMNMCSKCHK M+L QEQA LAASSIG+I++GS
Sbjct: 3   HDQTGCEAAPEGPMLCINNCGFFGSAATMNMCSKCHKDMMLKQEQATLAASSIGNIMNGS 62

Query: 63  SGGTGKEPIVAGSVDLQVGPVEIKKFSMEP--SSGSSFGFAGVKAKEGPKRCTTCNKRVG 120
           S  +G EP +  +V++ V PVE K  S EP  +SGS       K K+GPKRC+ CNKRVG
Sbjct: 63  SSSSGIEPAITANVEISVDPVEPKIISAEPLVASGSEESLEK-KPKDGPKRCSNCNKRVG 121

Query: 121 LTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           LTGFNCRCGNL+CAVHRYSDKH CPFDYRTA R+AIAKANPVVKAEKLDKI
Sbjct: 122 LTGFNCRCGNLYCAVHRYSDKHDCPFDYRTAGRDAIAKANPVVKAEKLDKI 172

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|254681442|gb|ACT78956.1| zinc finger protein [Gossypium arboreum]

 Score =  253 bits (646), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 126/172 (73%), Positives = 141/172 (81%), Gaps = 4/172 (2%)

Query: 1   MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVH 60
           M+ HDETG QA EGPILCVNNCGFFGSAATMNMCSKCHKAMIL QEQAQL ASSI SIV+
Sbjct: 1   MDPHDETGRQASEGPILCVNNCGFFGSAATMNMCSKCHKAMILKQEQAQLVASSIDSIVN 60

Query: 61  GSSGGTGKEPIVAGSVDLQVGPVEIK-KFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRV 119
           GS+ G GKEP VA ++ +Q G    K + S++PS      F G+K KEGP RC  C+KRV
Sbjct: 61  GSTSGNGKEPSVAAALAVQCGNFGSKIESSIDPSH---MTFGGMKTKEGPNRCNACHKRV 117

Query: 120 GLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           GLTGF+CRCGN+FCA HRYSDKH CPFDYRTAAR+AIAKANPVV+AEKLDKI
Sbjct: 118 GLTGFSCRCGNIFCAAHRYSDKHNCPFDYRTAARDAIAKANPVVRAEKLDKI 169

Source: Gossypium arboreum

Species: Gossypium arboreum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727441|ref|NP_001236393.1| uncharacterized protein LOC100500070 [Glycine max] gi|255628951|gb|ACU14820.1| unknown [Glycine max]

 Score =  253 bits (645), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 129/175 (73%), Positives = 146/175 (83%), Gaps = 6/175 (3%)

Query: 3   SHDETGCQAP-EGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHG 61
            HD+TGCQAP EGPILC+NNCGFFGSAATMNMCSKCHK M+L QEQA+LAASSIG+I++G
Sbjct: 2   DHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMLLKQEQAKLAASSIGNIMNG 61

Query: 62  SSGGTGKEPIVAG----SVDLQVGPVEIKKFSMEPSSGS-SFGFAGVKAKEGPKRCTTCN 116
           SS  T KEP+V      +VD+ V PVE K  S++P  GS   G    K K+GPKRC++CN
Sbjct: 62  SSSSTEKEPVVVAAAAANVDIPVIPVEPKTVSVQPLFGSGPEGSGEAKLKDGPKRCSSCN 121

Query: 117 KRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           KRVGLTGFNCRCG+LFCAVHRYSDKH CPFDYRTAAR+AIAKANPVVKAEKLDKI
Sbjct: 122 KRVGLTGFNCRCGDLFCAVHRYSDKHNCPFDYRTAARDAIAKANPVVKAEKLDKI 176

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053364|ref|XP_002297783.1| predicted protein [Populus trichocarpa] gi|118481683|gb|ABK92782.1| unknown [Populus trichocarpa] gi|222845041|gb|EEE82588.1| predicted protein [Populus trichocarpa]

 Score =  251 bits (641), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 125/170 (73%), Positives = 137/170 (80%), Gaps = 2/170 (1%)

Query: 4   HDETGCQAP-EGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGS 62
           HDETGCQAP EGPILC NNCGFFGSAATMNMCSKCHK M+L QEQA LAASSIGSIV+GS
Sbjct: 3   HDETGCQAPPEGPILCTNNCGFFGSAATMNMCSKCHKGMLLKQEQANLAASSIGSIVNGS 62

Query: 63  SGGTGKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFG-FAGVKAKEGPKRCTTCNKRVGL 121
           S     EP++A  +D+Q   VE K  +++PS  S  G     K KEGP RCT+C KRVGL
Sbjct: 63  SSSNVFEPVIADIIDVQNNAVEPKTITVQPSCASGSGERVEAKPKEGPNRCTSCKKRVGL 122

Query: 122 TGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
           TGF CRCG+LFCA HRYSDKH CPFDYR+AAREAIAKANPVVKAEKLDKI
Sbjct: 123 TGFKCRCGSLFCASHRYSDKHDCPFDYRSAAREAIAKANPVVKAEKLDKI 172

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
TAIR|locus:2008251	173	AT1G51200 [Arabidopsis thalian	0.970	0.959	0.583	2.9e-48
TAIR|locus:2083208	170	AT3G52800 [Arabidopsis thalian	0.970	0.976	0.437	1.3e-34
TAIR|locus:2049505	161	AT2G36320 [Arabidopsis thalian	0.923	0.981	0.434	1.1e-32
UNIPROTKB|E1C732	204	E1C732 "Uncharacterized protei	0.397	0.333	0.632	3.8e-31
TAIR|locus:2034650	168	AT1G12440 [Arabidopsis thalian	0.964	0.982	0.411	1.4e-30
MGI|MGI:1278334	213	Zfand5 "zinc finger, AN1-type	0.473	0.380	0.567	4.2e-30
RGD|1310776	213	Zfand5 "zinc finger, AN1-type	0.473	0.380	0.567	4.2e-30
UNIPROTKB|A7MBA8	213	ZFAND5 "ZFAND5 protein" [Bos t	0.473	0.380	0.555	8.6e-30
UNIPROTKB|E2RMV3	213	ZFAND5 "Uncharacterized protei	0.473	0.380	0.555	8.6e-30
UNIPROTKB|O76080	213	ZFAND5 "AN1-type zinc finger p	0.473	0.380	0.555	8.6e-30

TAIR|locus:2008251 AT1G51200 [Arabidopsis thaliana (taxid:3702)]

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 101/173 (58%), Positives = 114/173 (65%)

Query:     4 HDETGCQAP-EGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXX 62
             HD+TGCQ+P EGP LC NNCGFFGSAATMNMCSKCHK M+  QEQ   A           
Sbjct:     3 HDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQG--AKFASAVSGTSS 60

Query:    63 XXXXXKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFG--FAGVKAKE--GPKRCTTCNKR 118
                  KE   A  VD++   VE    S++PSS        A  +A +  GP RCTTCNKR
Sbjct:    61 SSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCNKR 120

Query:   119 VGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
             VGLTGF CRCG+LFC  HRY+D H C F+Y  AA+EAIAKANPVVKAEKLDKI
Sbjct:   121 VGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0007067 "mitosis" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2083208 AT3G52800 [Arabidopsis thaliana (taxid:3702)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 74/169 (43%), Positives = 95/169 (56%)

Query:     5 DETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXX 64
             +E  CQ PE   LCVNNCGF GS+ATMN+CS C+  + L Q+Q   +             
Sbjct:     3 EEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVSP 62

Query:    65 XXXKEPIVAGSV--DLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLT 122
                    ++  +   L   P  +K    E  +  S        ++ P RCTTC KRVGLT
Sbjct:    63 PSSSSSEISSPIIPPLLKNP-SVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLT 121

Query:   123 GFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
             GF CRCG +FC VHRY + HGC +D+++A RE IAKANP+VKA KL KI
Sbjct:   122 GFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2049505 AT2G36320 [Arabidopsis thaliana (taxid:3702)]

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 73/168 (43%), Positives = 91/168 (54%)

Query:     5 DETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXXXXX 64
             +E  C+ PEG  LCVNNCGFFGS+ATMN+CS C+  + L Q+Q                 
Sbjct:     3 EEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQ---------ASMKSTV 53

Query:    65 XXXKEPIVAGSVDLQVGPVEIKKFSM-EPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTG 123
                  P++A  ++     +EI      E               + P RCT C KRVGLTG
Sbjct:    54 ESSLSPVIAPVLENYAAELEIPTTKKTEEKKPIQIPTEQPSPPQRPNRCTVCRKRVGLTG 113

Query:   124 FNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
             F CRCG  FC  HRY + HGC FD+++A RE IAKANP+V A KL KI
Sbjct:   114 FMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E1C732 E1C732 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 258 (95.9 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
 Identities = 43/68 (63%), Positives = 52/68 (76%)

Query:   104 KAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVV 163
             K K+   RC TC K++GLTGF+CRCGNLFCA+HRYSD H CP+DY+  A E I K NPVV
Sbjct:   137 KPKQKKNRCFTCRKKIGLTGFDCRCGNLFCAIHRYSDMHACPYDYKAEAAEKIRKENPVV 196

Query:   164 KAEKLDKI 171
              AEK+ K+
Sbjct:   197 IAEKIQKL 204

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2034650 AT1G12440 [Arabidopsis thaliana (taxid:3702)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 70/170 (41%), Positives = 93/170 (54%)

Query:     2 ESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAAXXXXXXXXX 61
             E +D T   +P  P LCV  CGFFGS + MN+CSKC++ +   +EQ   A+         
Sbjct:     4 EQNDSTSF-SPSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQT--ASAKAAVEKSL 60

Query:    62 XXXXXXKEPIVAGSVDLQVGPVEIKKFSMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGL 121
                    +P    S ++  G +     S     G S        K    RC +CNK+VG+
Sbjct:    61 NPNKPKTQP--QQSQEITQGVLGSGSSSSSTRGGDSAAAPLDPPKSTATRCLSCNKKVGV 118

Query:   122 TGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI 171
             TGF CRCG+ FC  HRY + H C FD++  AREAIAKANPVVKA+K+D+I
Sbjct:   119 TGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:1278334 Zfand5 "zinc finger, AN1-type domain 5" [Mus musculus (taxid:10090)]

 Score = 250 (93.1 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
 Identities = 46/81 (56%), Positives = 54/81 (66%)

Query:    91 EPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRT 150
             +PSS  S   A    K    RC  C K+VGLTGF+CRCGNLFC +HRYSDKH CP+DY+ 
Sbjct:   133 QPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKA 192

Query:   151 AAREAIAKANPVVKAEKLDKI 171
              A   I K NPVV AEK+ +I
Sbjct:   193 EAAAKIRKENPVVVAEKIQRI 213

GO:0001701 "in utero embryonic development" evidence=IMP

GO:0001944 "vasculature development" evidence=IMP

GO:0003016 "respiratory system process" evidence=IMP

GO:0003677 "DNA binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IMP

GO:0048705 "skeletal system morphogenesis" evidence=IMP

GO:0048745 "smooth muscle tissue development" evidence=IMP

GO:0060324 "face development" evidence=IMP

RGD|1310776 Zfand5 "zinc finger, AN1-type domain 5" [Rattus norvegicus (taxid:10116)]

 Score = 250 (93.1 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
 Identities = 46/81 (56%), Positives = 54/81 (66%)

Query:    91 EPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRT 150
             +PSS  S   A    K    RC  C K+VGLTGF+CRCGNLFC +HRYSDKH CP+DY+ 
Sbjct:   133 QPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKA 192

Query:   151 AAREAIAKANPVVKAEKLDKI 171
              A   I K NPVV AEK+ +I
Sbjct:   193 EAAAKIRKENPVVVAEKIQRI 213

GO:0001701 "in utero embryonic development" evidence=IEA;ISO

GO:0001944 "vasculature development" evidence=IEA;ISO

GO:0003016 "respiratory system process" evidence=IEA;ISO

GO:0003677 "DNA binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA;ISO

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA;ISO

GO:0048705 "skeletal system morphogenesis" evidence=IEA;ISO

GO:0048745 "smooth muscle tissue development" evidence=IEA;ISO

GO:0060324 "face development" evidence=IEA;ISO

UNIPROTKB|A7MBA8 ZFAND5 "ZFAND5 protein" [Bos taurus (taxid:9913)]

 Score = 247 (92.0 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
 Identities = 45/81 (55%), Positives = 54/81 (66%)

Query:    91 EPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRT 150
             +PS+  S   A    K    RC  C K+VGLTGF+CRCGNLFC +HRYSDKH CP+DY+ 
Sbjct:   133 QPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKA 192

Query:   151 AAREAIAKANPVVKAEKLDKI 171
              A   I K NPVV AEK+ +I
Sbjct:   193 EAAAKIRKENPVVVAEKIQRI 213

GO:0060324 "face development" evidence=IEA

GO:0048745 "smooth muscle tissue development" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001944 "vasculature development" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|E2RMV3 ZFAND5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 247 (92.0 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
 Identities = 45/81 (55%), Positives = 54/81 (66%)

Query:    91 EPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRT 150
             +PS+  S   A    K    RC  C K+VGLTGF+CRCGNLFC +HRYSDKH CP+DY+ 
Sbjct:   133 QPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKA 192

Query:   151 AAREAIAKANPVVKAEKLDKI 171
              A   I K NPVV AEK+ +I
Sbjct:   193 EAAAKIRKENPVVVAEKIQRI 213

GO:0060324 "face development" evidence=IEA

GO:0048745 "smooth muscle tissue development" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001944 "vasculature development" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|O76080 ZFAND5 "AN1-type zinc finger protein 5" [Homo sapiens (taxid:9606)]

 Score = 247 (92.0 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
 Identities = 45/81 (55%), Positives = 54/81 (66%)

Query:    91 EPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRT 150
             +PS+  S   A    K    RC  C K+VGLTGF+CRCGNLFC +HRYSDKH CP+DY+ 
Sbjct:   133 QPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKA 192

Query:   151 AAREAIAKANPVVKAEKLDKI 171
              A   I K NPVV AEK+ +I
Sbjct:   193 EAAAKIRKENPVVVAEKIQRI 213

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001944 "vasculature development" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0010761 "fibroblast migration" evidence=IEA

GO:0048008 "platelet-derived growth factor receptor signaling pathway" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0048745 "smooth muscle tissue development" evidence=IEA

GO:0060324 "face development" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A2YEZ6	SAP8_ORYSI	No assigned EC number	0.7192	0.9707	0.9707	N/A	no
Q6H7P8	SAP4_ORYSJ	No assigned EC number	0.7109	0.9707	0.9595	no	no
Q8H0X0	SAP2_ARATH	No assigned EC number	0.5965	0.9649	0.9537	yes	no
A3BDI8	SAP8_ORYSJ	No assigned EC number	0.7192	0.9707	0.9707	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	171
smart00154	39	smart00154, ZnF_AN1, AN1-like Zinc finger	1e-12
pfam01428	43	pfam01428, zf-AN1, AN1-like Zinc finger	1e-08
pfam01754	25	pfam01754, zf-A20, A20-like zinc finger	3e-07
smart00259	26	smart00259, ZnF_A20, A20-like zinc fingers	5e-04

>gnl|CDD|197545 smart00154, ZnF_AN1, AN1-like Zinc finger

 Score = 58.6 bits (142), Expect = 1e-12
 Identities = 24/39 (61%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 112 CTTCNKRVGLTGFNCR-CGNLFCAVHRYSDKHGCPFDYR 149
           C  C K+VGLTGF CR CGNLFC  HR  + H CP DY+
Sbjct: 1   CHFCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGDYK 39

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. Length = 39

>gnl|CDD|201791 pfam01428, zf-AN1, AN1-like Zinc finger

 Score = 48.2 bits (115), Expect = 1e-08
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 114 TCNKRVGLTGFNCR-CGNLFCAVHRYSDKHGCPFDYRTAA 152
            C K+  L  F CR CG  FC  HR  + H CP  Y++ A
Sbjct: 5   GCKKKDFL-PFKCRFCGGTFCLKHRLPEDHNCPGLYKSKA 43

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis. The following pattern describes the zinc finger. C-X2-C-X(9-12)-C-X(1-2)-C-X4-C-X2-H-X5-H-X-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Length = 43

>gnl|CDD|201955 pfam01754, zf-A20, A20-like zinc finger

 Score = 44.5 bits (106), Expect = 3e-07
 Identities = 13/25 (52%), Positives = 18/25 (72%)

Query: 15 PILCVNNCGFFGSAATMNMCSKCHK 39
          P+ C   CGF+GS AT  +CSKC++
Sbjct: 1  PLKCTPGCGFYGSPATEGLCSKCYR 25

The A20 Zn-finger of bovine/human Rabex5/rabGEF1 is a Ubiquitin Binding Domain. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation. Length = 25

>gnl|CDD|128555 smart00259, ZnF_A20, A20-like zinc fingers

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)

Query: 15 PILCV-NNCGFFGSAATMNMCSKCHK 39
          PI C    CGFFG+ AT  +CSKC K
Sbjct: 1  PIKCRRPGCGFFGNPATEGLCSKCFK 26

A20- (an inhibitor of cell death)-like zinc fingers. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappaB activation. Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	171
KOG3173	167	consensus Predicted Zn-finger protein [General fun	100.0
smart00154	39	ZnF_AN1 AN1-like Zinc finger. Zinc finger at the C	99.55
PF01754	25	zf-A20: A20-like zinc finger; InterPro: IPR002653	99.54
smart00259	26	ZnF_A20 A20-like zinc fingers. A20- (an inhibitor	99.47
PF01428	43	zf-AN1: AN1-like Zinc finger; InterPro: IPR000058	99.08
COG3582	162	Predicted nucleic acid binding protein containing	96.76
KOG3183	250	consensus Predicted Zn-finger protein [General fun	96.47
PF01363	69	FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc f	94.32
KOG3183	250	consensus Predicted Zn-finger protein [General fun	93.28
cd00065	57	FYVE FYVE domain; Zinc-binding domain; targets pro	92.9
smart00064	68	FYVE Protein present in Fab1, YOTB, Vac1, and EEA1	92.57
KOG1818	634	consensus Membrane trafficking and cell signaling	89.5
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	87.71
PF00130	53	C1_1: Phorbol esters/diacylglycerol binding domain	84.27
PF15135	278	UPF0515: Uncharacterised protein UPF0515	81.57

>KOG3173 consensus Predicted Zn-finger protein [General function prediction only]

Probab=100.00  E-value=3.5e-47  Score=307.54  Aligned_cols=162  Identities=45%  Similarity=0.805  Sum_probs=107.8

Q ss_pred             CCCccccCCCCC-CCccchhcCCCCCCccccCCchhHHHHHHHHHHHHH-hhhhccccccccCCCCCCCCCCcccCCccc
Q 030810            1 MESHDETGCQAP-EGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQA-QLAASSIGSIVHGSSGGTGKEPIVAGSVDL   78 (171)
Q Consensus         1 M~~~~~~~~q~p-~~p~lC~n~CGFfGs~at~n~CSkCyr~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~   78 (171)
                      |+ ++....+.+ ..++||+|||||||+|+|+||||+||++++.++++. ..+...+...+.+ +   ...+    ..+.
T Consensus         1 M~-~e~~~~~~~~~~~~lc~~gCGf~G~p~~~n~CSkC~~e~~~~~~~~~~~~~~~~~~~~~~-~---~s~~----~~~~   71 (167)
T KOG3173|consen    1 MA-SETNGSQTPPSQDLLCVNGCGFYGSPATENLCSKCYRDHLLRQQQKQARASPPVESSLSS-P---RSVP----SRDP   71 (167)
T ss_pred             Cc-ccccCCCCCCccccccccCccccCChhhccHHHHHHHHHHHHhhhccccccCcccccccC-c---cccC----cccc
Confidence            55 444444432 346999999999999999999999999999887765 2222211110000 0   0000    0000


Q ss_pred             cCCccccccc-ccCCC--CCCCCCCCCCCCCCCCCccccccccccccceeeecCccccCCCCCCCCCCCCccchHHHHHH
Q 030810           79 QVGPVEIKKF-SMEPS--SGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREA  155 (171)
Q Consensus        79 ~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~  155 (171)
                      .....+.... +...+  ..+............++||..|+|||||+||.||||++||+.|||||.|+|+||||.+||+.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~rC~~C~kk~gltgf~CrCG~~fC~~HRy~e~H~C~fDyK~~gr~~  151 (167)
T KOG3173|consen   72 PAVSLESTTESELKLVSDTPSTEEEDEESKPKKKKRCFKCRKKVGLTGFKCRCGNTFCGTHRYPEQHDCSFDYKQAGREK  151 (167)
T ss_pred             ccccccccccccccccccCCcccccccccccccchhhhhhhhhhcccccccccCCcccccccCCccccccccHHHHHHHH
Confidence            0000000000 00000  00011112233445688999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCcccccccccC
Q 030810          156 IAKANPVVKAEKLDKI  171 (171)
Q Consensus       156 i~k~Np~v~~~Ki~KI  171 (171)
                      |+++||+|+++||+||
T Consensus       152 i~k~nP~v~a~k~~ki  167 (167)
T KOG3173|consen  152 IAKANPVVKADKLQKI  167 (167)
T ss_pred             HHHhCCeeeccccccC
Confidence            9999999999999998

>smart00154 ZnF_AN1 AN1-like Zinc finger

Probab=99.55  E-value=1.7e-15  Score=96.27  Aligned_cols=38  Identities=63%  Similarity=1.456  Sum_probs=36.9

Q ss_pred             cccccccccccceeee-cCccccCCCCCCCCCCCCccch
Q 030810          112 CTTCNKRVGLTGFNCR-CGNLFCAVHRYSDKHGCPFDYR  149 (171)
Q Consensus       112 C~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  149 (171)
                      |+.|+++++|++|+|+ |+++||..|||||.|+|++|||
T Consensus         1 C~~C~~~~~l~~f~C~~C~~~FC~~HR~~e~H~C~~~~k   39 (39)
T smart00154        1 CHFCRKKVGLTGFKCRHCGNLFCGEHRLPEDHDCPGDYK   39 (39)
T ss_pred             CcccCCcccccCeECCccCCccccccCCccccCCccccC
Confidence            7899999999999999 9999999999999999999996

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis.

>PF01754 zf-A20: A20-like zinc finger; InterPro: IPR002653 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.54  E-value=2.4e-15  Score=87.66  Aligned_cols=25  Identities=60%  Similarity=1.327  Sum_probs=20.8

Q ss_pred             ccchhcCCCCCCccccCCchhHHHH
Q 030810           15 PILCVNNCGFFGSAATMNMCSKCHK   39 (171)
Q Consensus        15 p~lC~n~CGFfGs~at~n~CSkCyr   39 (171)
                      |+||++|||||||++|+||||+|||
T Consensus         1 ~~~C~~gCgf~Gs~~~~~~Cs~C~~   25 (25)
T PF01754_consen    1 PSLCANGCGFYGSPATNGLCSKCYR   25 (25)
T ss_dssp             SSB-TTTSSSB-BGGGTTS-HHHHH
T ss_pred             CCcccCCCCCcccccccCcchhhcC
Confidence            5799999999999999999999997

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the zinc finger domain found in A20. A20 is an inhibitor of cell death that inhibits NF-kappaB activation via the tumour necrosis factor receptor associated factor pathway []. The zinc finger domains appear to mediate self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding, 0008270 zinc ion binding; PDB: 2FIF_F 2FID_B 2C7N_C 2C7M_A 2L00_A 2KZY_A 2EQG_A 2EQE_A 3OJ3_J 3OJ4_C ....

>smart00259 ZnF_A20 A20-like zinc fingers

Probab=99.47  E-value=1e-14  Score=85.73  Aligned_cols=25  Identities=60%  Similarity=1.278  Sum_probs=23.4

Q ss_pred             ccchh-cCCCCCCccccCCchhHHHH
Q 030810           15 PILCV-NNCGFFGSAATMNMCSKCHK   39 (171)
Q Consensus        15 p~lC~-n~CGFfGs~at~n~CSkCyr   39 (171)
                      |++|+ +||||||||+|+||||||||
T Consensus         1 ~~~C~~~~CgF~G~~~t~~~CskCy~   26 (26)
T smart00259        1 PIKCRRPGCGFFGNPATEGLCSKCFK   26 (26)
T ss_pred             CCccccCCCCCcCChhhcccCHhhcC
Confidence            46899 99999999999999999996

A20- (an inhibitor of cell death)-like zinc fingers. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappaB activation.

>PF01428 zf-AN1: AN1-like Zinc finger; InterPro: IPR000058 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.08  E-value=3.6e-11  Score=77.36  Aligned_cols=38  Identities=34%  Similarity=0.866  Sum_probs=28.1

Q ss_pred             ccc--ccccccccceeee-cCccccCCCCCCCCCCCCccchH
Q 030810          112 CTT--CNKRVGLTGFNCR-CGNLFCAVHRYSDKHGCPFDYRT  150 (171)
Q Consensus       112 C~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  150 (171)
                      |..  |++++. ++|.|+ |+..||..||||+.|+|+++++.
T Consensus         1 C~~~~C~~~~~-~~~~C~~C~~~FC~~Hr~~e~H~C~~~~~~   41 (43)
T PF01428_consen    1 CSFPGCKKKDF-LPFKCKHCGKSFCLKHRLPEDHNCSKLQKK   41 (43)
T ss_dssp             -SSTTT--BCT-SHEE-TTTS-EE-TTTHSTTTCT-SSTTSC
T ss_pred             CccCcCcCccC-CCeECCCCCcccCccccCccccCCcchhhc
Confidence            455  998887 799999 99999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the AN1-type zinc finger domain, which has a dimetal (zinc)-bound alpha/beta fold. This domain was first identified as a zinc finger at the C terminus of AN1 Q91889 from SWISSPROT, a ubiquitin-like protein in Xenopus laevis []. The AN1-type zinc finger contains six conserved cysteines and two histidines that could potentially coordinate 2 zinc atoms. Certain stress-associated proteins (SAP) contain AN1 domain, often in combination with A20 zinc finger domains (SAP8) or C2H2 domains (SAP16) []. For example, the human protein Znf216 has an A20 zinc-finger at the N terminus and an AN1 zinc-finger at the C terminus, acting to negatively regulate the NFkappaB activation pathway and to interact with components of the immune response like RIP, IKKgamma and TRAF6. The interact of Znf216 with IKK-gamma and RIP is mediated by the A20 zinc-finger domain, while its interaction with TRAF6 is mediated by the AN1 zinc-finger domain; therefore, both zinc-finger domains are involved in regulating the immune response []. The AN1 zinc finger domain is also found in proteins containing a ubiquitin-like domain, which are involved in the ubiquitination pathway []. Proteins containing an AN1-type zinc finger include: Ascidian posterior end mark 6 (pem-6) protein []. Human AWP1 protein (associated with PRK1), which is expressed during early embryogenesis []. Human immunoglobulin mu binding protein 2 (SMUBP-2), mutations in which cause muscular atrophy with respiratory distress type 1 []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 1WFP_A 1WYS_A 1WG2_A 1WFH_A 1X4W_A 1WFE_A 1WFL_A 1X4V_A.

>COG3582 Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only]

Probab=96.76  E-value=0.00066  Score=55.43  Aligned_cols=38  Identities=29%  Similarity=0.491  Sum_probs=30.2

Q ss_pred             ccccccccccccceeee-cCccccCCCCCCCCCCCCccch
Q 030810          111 RCTTCNKRVGLTGFNCR-CGNLFCAVHRYSDKHGCPFDYR  149 (171)
Q Consensus       111 rC~~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  149 (171)
                      +|..|++..+|. ++|- |++.||+.||+++.|+|.+...
T Consensus        99 ~~~~~g~~s~l~-~~c~~c~g~fc~~h~lp~nhdc~~L~s  137 (162)
T COG3582          99 TPQCTGKGSTLA-GKCNYCTGYFCAEHRLPENHDCNGLGS  137 (162)
T ss_pred             cceeccCCcccc-ccccCCCCcceeceecccccccccHHH
Confidence            344555555554 8898 9999999999999999998854

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=96.47  E-value=0.0011  Score=57.25  Aligned_cols=40  Identities=35%  Similarity=0.945  Sum_probs=35.1

Q ss_pred             Cccc--cccccccccceeee-cCccccCCCCCCCCCCCCccchH
Q 030810          110 KRCT--TCNKRVGLTGFNCR-CGNLFCAVHRYSDKHGCPFDYRT  150 (171)
Q Consensus       110 ~rC~--~C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~  150 (171)
                      ..|.  .|+ .+.++.|+|- |+.+||..||-.+.|+|.+.|..
T Consensus         9 kHCs~~~Ck-qlDFLPf~Cd~C~~~FC~eHrsye~H~Cp~~~~~   51 (250)
T KOG3183|consen    9 KHCSVPYCK-QLDFLPFKCDGCSGIFCLEHRSYESHHCPKGLRI   51 (250)
T ss_pred             cccCcchhh-hccccceeeCCccchhhhccchHhhcCCCccccc
Confidence            4676  787 6788999999 99999999999999999998763

>PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.32  E-value=0.024  Score=38.62  Aligned_cols=29  Identities=31%  Similarity=0.887  Sum_probs=17.7

Q ss_pred             CCCcccccccccccc--ceeee-cCccccCCC
Q 030810          108 GPKRCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       108 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ....|..|+++.+|+  -..|| ||.+||+.+
T Consensus         8 ~~~~C~~C~~~F~~~~rrhhCr~CG~~vC~~C   39 (69)
T PF01363_consen    8 EASNCMICGKKFSLFRRRHHCRNCGRVVCSSC   39 (69)
T ss_dssp             G-SB-TTT--B-BSSS-EEE-TTT--EEECCC
T ss_pred             CCCcCcCcCCcCCCceeeEccCCCCCEECCch
Confidence            457899999999997  49999 999999764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The FYVE zinc finger is named after four proteins that it has been found in: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two zinc ions []. The FYVE finger has eight potential zinc coordinating cysteine positions. Many members of this family also include two histidines in a motif R+HHC+XCG, where + represents a charged residue and X any residue. FYVE-type domains are divided into two known classes: FYVE domains that specifically bind to phosphatidylinositol 3-phosphate in lipid bilayers and FYVE-related domains of undetermined function []. Those that bind to phosphatidylinositol 3-phosphate are often found in proteins targeted to lipid membranes that are involved in regulating membrane traffic [, , ]. Most FYVE domains target proteins to endosomes by binding specifically to phosphatidylinositol-3-phosphate at the membrane surface. By contrast, the CARP2 FYVE-like domain is not optimized to bind to phosphoinositides or insert into lipid bilayers. FYVE domains are distinguished from other zinc fingers by three signature sequences: an N-terminal WxxD motif, a basic R(R/K)HHCR patch, and a C-terminal RVC motif. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0046872 metal ion binding; PDB: 1HYI_A 1JOC_B 1HYJ_A 1DVP_A 3ZYQ_A 4AVX_A 1VFY_A 3T7L_A 1X4U_A 1WFK_A ....

>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]

Probab=93.28  E-value=0.019  Score=49.74  Aligned_cols=41  Identities=34%  Similarity=0.782  Sum_probs=34.8

Q ss_pred             CCCCCCccc--ccccccccc-ceeee-cCccccCCCCCCCCCCCC
Q 030810          105 AKEGPKRCT--TCNKRVGLT-GFNCR-CGNLFCAVHRYSDKHGCP  145 (171)
Q Consensus       105 ~~~~~~rC~--~C~kkvgl~-gf~Cr-Cg~~FC~~HRy~e~H~C~  145 (171)
                      .+...++|.  .|++++-|. .+.|+ ||..||-+||++-.|.|.
T Consensus        94 ~k~~t~kc~~~~c~k~~~~~~~~~c~~c~~~~c~khr~~~dhsc~  138 (250)
T KOG3183|consen   94 RKVFTNKCPVPRCKKTLTLANKITCSKCGRNFCLKHRHPLDHSCN  138 (250)
T ss_pred             cccccccCCchhhHHHHHHHHhhhhHhhcchhhhhccCCCCchhh
Confidence            444567786  789888775 69999 999999999999999998

>cd00065 FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1;

Probab=92.90  E-value=0.045  Score=35.76  Aligned_cols=27  Identities=41%  Similarity=1.030  Sum_probs=23.7

Q ss_pred             Ccccccccccccc--ceeee-cCccccCCC
Q 030810          110 KRCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       110 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ..|..|+++.+++  ...|| ||.+||+.+
T Consensus         3 ~~C~~C~~~F~~~~rk~~Cr~Cg~~~C~~C   32 (57)
T cd00065           3 SSCMGCGKPFTLTRRRHHCRNCGRIFCSKC   32 (57)
T ss_pred             CcCcccCccccCCccccccCcCcCCcChHH
Confidence            5799999999996  69999 999999754

>smart00064 FYVE Protein present in Fab1, YOTB, Vac1, and EEA1

Probab=92.57  E-value=0.067  Score=36.33  Aligned_cols=29  Identities=38%  Similarity=0.974  Sum_probs=24.4

Q ss_pred             CCcccccccccccc--ceeee-cCccccCCCC
Q 030810          109 PKRCTTCNKRVGLT--GFNCR-CGNLFCAVHR  137 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  137 (171)
                      ...|..|+++.+++  ...|| ||.+||+.+-
T Consensus        10 ~~~C~~C~~~F~~~~rk~hCr~CG~i~C~~C~   41 (68)
T smart00064       10 VSNCMGCGKEFNLTKRRHHCRNCGRIFCSKCS   41 (68)
T ss_pred             CCcCcccCccccCcccccccccCCCCcChHHc
Confidence            35799999999986  68999 9999997553

The FYVE zinc finger is named after four proteins where it was first found: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two Zn2+ ions. The FYVE finger has eight potential zinc coordinating cysteine positions. The FYVE finger is structurally related to the

>KOG1818 consensus Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=89.50  E-value=0.13  Score=49.87  Aligned_cols=45  Identities=29%  Similarity=0.710  Sum_probs=35.2

Q ss_pred             CCCccccccccccccc--eeee-cCccccCCCC-----------CCCCCCCCccchHHH
Q 030810          108 GPKRCTTCNKRVGLTG--FNCR-CGNLFCAVHR-----------YSDKHGCPFDYRTAA  152 (171)
Q Consensus       108 ~~~rC~~C~kkvgl~g--f~Cr-Cg~~FC~~HR-----------y~e~H~C~fDyk~~~  152 (171)
                      ....|..|+.+.|+++  ..|| ||.+||+.|=           |.+.--|.-||...-
T Consensus       164 D~~~C~rCr~~F~~~~rkHHCr~CG~vFC~qcss~s~~lP~~Gi~~~VRVCd~C~E~l~  222 (634)
T KOG1818|consen  164 DSEECLRCRVKFGLTNRKHHCRNCGQVFCGQCSSKSLTLPKLGIEKPVRVCDSCYELLT  222 (634)
T ss_pred             cccccceeeeeeeeccccccccccchhhccCccccccCcccccccccceehhhhHHHhh
Confidence            3578999999999985  8999 9999999884           344566777776433

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=87.71  E-value=0.27  Score=28.67  Aligned_cols=23  Identities=35%  Similarity=0.743  Sum_probs=20.4

Q ss_pred             Cccccccccccccceeee-cCccc
Q 030810          110 KRCTTCNKRVGLTGFNCR-CGNLF  132 (171)
Q Consensus       110 ~rC~~C~kkvgl~gf~Cr-Cg~~F  132 (171)
                      .+|-.|++.|.+..-.|- ||+.|
T Consensus         1 K~CP~C~~~V~~~~~~Cp~CG~~F   24 (26)
T PF10571_consen    1 KTCPECGAEVPESAKFCPHCGYDF   24 (26)
T ss_pred             CcCCCCcCCchhhcCcCCCCCCCC
Confidence            368999999999999999 99887

Several members are annotated as putative helicases.

>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger

Probab=84.27  E-value=0.64  Score=29.90  Aligned_cols=24  Identities=38%  Similarity=1.054  Sum_probs=18.5

Q ss_pred             CCCccccccccc---cccceeee-cCcc
Q 030810          108 GPKRCTTCNKRV---GLTGFNCR-CGNL  131 (171)
Q Consensus       108 ~~~rC~~C~kkv---gl~gf~Cr-Cg~~  131 (171)
                      .+..|..|++.|   ++.|++|+ |+.+
T Consensus        10 ~~~~C~~C~~~i~g~~~~g~~C~~C~~~   37 (53)
T PF00130_consen   10 KPTYCDVCGKFIWGLGKQGYRCSWCGLV   37 (53)
T ss_dssp             STEB-TTSSSBECSSSSCEEEETTTT-E
T ss_pred             CCCCCcccCcccCCCCCCeEEECCCCCh
Confidence            467999999999   56799999 7654

Phorbol esters (PE) are analogues of DAG and potent tumour promoters that cause a variety of physiological changes when administered to both cells and tissues. DAG activates a family of serine/threonine protein kinases, collectively known as protein kinase C (PKC) []. Phorbol esters can directly stimulate PKC. The N-terminal region of PKC, known as C1, has been shown [] to bind PE and DAG in a phospholipid and zinc-dependent fashion. The C1 region contains one or two copies (depending on the isozyme of PKC) of a cysteine-rich domain, which is about 50 amino-acid residues long, and which is essential for DAG/PE-binding. The DAG/PE-binding domain binds two zinc ions; the ligands of these metal ions are probably the six cysteines and two histidines that are conserved in this domain.; GO: 0035556 intracellular signal transduction; PDB: 1RFH_A 2FNF_X 3PFQ_A 1PTQ_A 1PTR_A 2VRW_B 1XA6_A 2ENN_A 1TBN_A 1TBO_A ....

>PF15135 UPF0515: Uncharacterised protein UPF0515

Probab=81.57  E-value=0.81  Score=40.22  Aligned_cols=30  Identities=33%  Similarity=0.849  Sum_probs=23.9

Q ss_pred             CCCCCCcccccccc---------ccccceeee-cCccccC
Q 030810          105 AKEGPKRCTTCNKR---------VGLTGFNCR-CGNLFCA  134 (171)
Q Consensus       105 ~~~~~~rC~~C~kk---------vgl~gf~Cr-Cg~~FC~  134 (171)
                      ..+..+||..|+||         .|+.-|+|. |+++|=+
T Consensus       128 ~rKeVSRCr~C~~rYDPVP~dkmwG~aef~C~~C~h~F~G  167 (278)
T PF15135_consen  128 QRKEVSRCRKCRKRYDPVPCDKMWGIAEFHCPKCRHNFRG  167 (278)
T ss_pred             cccccccccccccccCCCccccccceeeeecccccccchh
Confidence            34557999999988         677789994 9999854

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	171
1wfl_A	74	Solution Structure Of The Zf-An1 Domain From Mouse		7e-15
1wff_A	85	Solution Structure Of The Zf-An1 Domain From Mouse		1e-12
1wfh_A	64	Solution Structrue Of The Zf-An1 Domain From Arabid		4e-12
1wfp_A	74	Solution Structure Of The Zf-an1 Domain From Arabio		2e-10
1wg2_A	64	Solution Structure Of Zf-An1 Domain From Arabidopsi		3e-09

>pdb|1WFL|A Chain A, Solution Structure Of The Zf-An1 Domain From Mouse Zinc Finger Protein 216 Length = 74

Iteration: 1
 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
Query: 104 KAKEGPK----RCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAA 152
           KA E PK    RC  C K+VGLTGF+CRCGNLFC +HRYSDKH CP+DY+  A
Sbjct: 16  KAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEA 68

>pdb|1WFF|A Chain A, Solution Structure Of The Zf-An1 Domain From Mouse Riken Cdna 2810002d23 Protein Length = 85

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 110 KRCTTCNKRVGL-TGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPV 162
           K C  C K+ GL T F CRCGN FCA HRY++ HGC +DY++A R  + +ANPV
Sbjct: 26  KHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPV 79

>pdb|1WFH|A Chain A, Solution Structrue Of The Zf-An1 Domain From Arabidopsis Thaliana At2g36320 Protein Length = 64

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 109 PKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAA 152
           P RCT C KRVGLTGF CRCG  FC  HRY + HGC FD+++A 
Sbjct: 15  PNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAG 58

>pdb|1WFP|A Chain A, Solution Structure Of The Zf-an1 Domain From Arabiopsis Thaliana F5o11.17 Protein Length = 74

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 111 RCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAA 152
           RC +CNK+VG+TGF CRCG+ FC  HRY + H C FD++  A
Sbjct: 27  RCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVA 68

>pdb|1WG2|A Chain A, Solution Structure Of Zf-An1 Domain From Arabidopsis Thaliana Length = 64

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 111 RCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAA 152
           RC +CNK+VG+ GF C+CG+ FC  HRY +KH C FD++   
Sbjct: 17  RCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVG 58

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	171
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	1e-28
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	8e-27
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	3e-26
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	6e-26
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	1e-23
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	4e-22
2c7n_A	74	Rabex-5, GEF 1, RAB guanine nucleotide exchange fa	6e-17
2kzy_A	62	ZNF216-A20, zfand5 protein (zinc finger protein 21	3e-13

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 85

 Score =  100 bits (251), Expect = 1e-28
 Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 1/63 (1%)

Query: 104 KAKEGPKRCTTCNKRVGL-TGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPV 162
             K+  K C  C K+ GL T F CRCGN FCA HRY++ HGC +DY++A R  + +ANPV
Sbjct: 20  TKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPV 79

Query: 163 VKA 165
              
Sbjct: 80  SGP 82

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 74

 Score = 95.8 bits (238), Expect = 8e-27
 Identities = 28/69 (40%), Positives = 36/69 (52%)

Query: 89  SMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDY 148
           S     G S        K    RC +CNK+VG+TGF CRCG+ FC  HRY + H C FD+
Sbjct: 5   SSGTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDF 64

Query: 149 RTAAREAIA 157
           +  A    +
Sbjct: 65  KGVASGPSS 73

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 93.7 bits (233), Expect = 3e-26
 Identities = 25/63 (39%), Positives = 35/63 (55%)

Query: 95  GSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAARE 154
           GSS      +      RC +CNK+VG+ GF C+CG+ FC  HRY +KH C FD++     
Sbjct: 1   GSSGSSGPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSG 60

Query: 155 AIA 157
             +
Sbjct: 61  PSS 63

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1 Length = 64

 Score = 93.0 bits (231), Expect = 6e-26
 Identities = 31/63 (49%), Positives = 37/63 (58%)

Query: 95  GSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAARE 154
           GSS         + P RCT C KRVGLTGF CRCG  FC  HRY + HGC FD+++A   
Sbjct: 1   GSSGSSGQPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSG 60

Query: 155 AIA 157
             +
Sbjct: 61  PSS 63

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1 Length = 74

 Score = 87.7 bits (217), Expect = 1e-23
 Identities = 37/65 (56%), Positives = 42/65 (64%)

Query: 89  SMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDY 148
           S  PSS  S   A    K    RC  C K+VGLTGF+CRCGNLFC +HRYSDKH CP+DY
Sbjct: 5   SSGPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDY 64

Query: 149 RTAAR 153
           +  A 
Sbjct: 65  KAEAS 69

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 67

 Score = 83.5 bits (206), Expect = 4e-22
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)

Query: 95  GSSFGFAGVKAKEGPKRCTTCNKRVGLTGF---NCRCGNLFCAVHRYSDKHGCPFDYRTA 151
           GSS        ++  +RC  C  ++ L      +CRCG +FC +HR  ++H C FD+   
Sbjct: 1   GSSGSSGSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGR 60

Query: 152 AREAIA 157
                +
Sbjct: 61  GSGPSS 66

>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B Length = 74

 Score = 70.3 bits (171), Expect = 6e-17
 Identities = 13/54 (24%), Positives = 21/54 (38%)

Query: 1  MESHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASS 54
              +  G    +  +LC   CG++G+ A    CSKC +       Q Q+    
Sbjct: 2  SLKSERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDW 55

>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A Length = 62

 Score = 60.5 bits (146), Expect = 3e-13
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 6  ETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLAASSIGSIVHGSS 63
                  GP+LC   CGF+G+  T  MCS C+K  +  Q+ +    S +G+    +S
Sbjct: 4  AQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSG-RMSPMGTASGSNS 60

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	171
1wff_A	85	Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc	99.95
1wfh_A	64	Zinc finger (AN1-like) family protein; ZF-AN1 doma	99.93
1wg2_A	64	Zinc finger (AN1-like) family protein; riken struc	99.92
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	99.92
1wfp_A	74	Zinc finger (AN1-like) family protein; ZF-AN1 doma	99.91
1x4w_A	67	Hypothetical protein FLJ13222; ZF-AN1 domain, zinc	99.91
2kzy_A	62	ZNF216-A20, zfand5 protein (zinc finger protein 21	99.78
2c7n_A	74	Rabex-5, GEF 1, RAB guanine nucleotide exchange fa	99.72
3oj3_I	49	Tumor necrosis factor alpha-induced protein 3; ubi	99.58
1wfe_A	86	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.35
1x4v_A	63	Hypothetical protein LOC130617; ZF-AN1 domain, zin	99.31
1wys_A	75	Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc	99.24
2eqe_A	48	Tumor necrosis factor, alpha-induced protein 3; ZF	97.87
1vfy_A	73	Phosphatidylinositol-3-phosphate binding FYVE doma	93.4
2yw8_A	82	RUN and FYVE domain-containing protein 1; structur	92.98
1x4u_A	84	Zinc finger, FYVE domain containing 27 isoform B;	92.56
1wfk_A	88	Zinc finger, FYVE domain containing 19; riken stru	92.46
1z2q_A	84	LM5-1; membrane protein, FYVE domain, zinc-finger;	92.32
1joc_A	125	EEA1, early endosomal autoantigen 1; FYVE domain,	92.21
3t7l_A	90	Zinc finger FYVE domain-containing protein 16; str	91.15
1dvp_A	220	HRS, hepatocyte growth factor-regulated tyrosine k	91.07
3zyq_A	226	Hepatocyte growth factor-regulated tyrosine kinas	90.53
1y02_A	120	CARP2, FYVE-ring finger protein sakura; zinc-bindi	88.81
2eqf_A	46	Tumor necrosis factor, alpha-induced protein 3; ZF	84.39
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	84.23
4b6d_A	61	RAC GTPase-activating protein 1; signaling protein	81.45
3mpx_A	434	FYVE, rhogef and PH domain-containing protein 5; s	80.49

>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.95  E-value=1.2e-30  Score=190.02  Aligned_cols=62  Identities=48%  Similarity=1.039  Sum_probs=59.0

Q ss_pred             CCCCCCcccccccccccc-ceeeecCccccCCCCCCCCCCCCccchHHHHHHHHHhCCccccc
Q 030810          105 AKEGPKRCTTCNKRVGLT-GFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAE  166 (171)
Q Consensus       105 ~~~~~~rC~~C~kkvgl~-gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~i~k~Np~v~~~  166 (171)
                      +++.++||+.|+|||||+ +|.||||++||+.|||||+|+|+||||++||++|+|+||+|+++
T Consensus        21 ~k~~~~rC~~C~kkvgl~~~f~CrCg~~FC~~HRy~e~H~C~fDyK~~gr~~iak~NPvV~a~   83 (85)
T 1wff_A           21 KKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS   83 (85)
T ss_dssp             CCCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred             CcccCccchhhCCeecccCCeEcCCCCEecccCCCccCCCCcchhhHHHHHHHHHHCCeecCC
Confidence            456689999999999996 99999999999999999999999999999999999999999986

>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.93  E-value=1.8e-27  Score=165.16  Aligned_cols=54  Identities=52%  Similarity=1.192  Sum_probs=50.6

Q ss_pred             CCCCCCCccccccccccccceeeecCccccCCCCCCCCCCCCccchHHHHHHHH
Q 030810          104 KAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIA  157 (171)
Q Consensus       104 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~i~  157 (171)
                      +++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|+
T Consensus        10 ~~k~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~l~   63 (64)
T 1wfh_A           10 SPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGPSS   63 (64)
T ss_dssp             CCCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSCCC
T ss_pred             CCCCcCCcChhhCCccCccCEEeecCCEeccccCCcccCCCCchhhHHHHHHhc
Confidence            456678999999999999999999999999999999999999999999999875

>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.92  E-value=5.7e-27  Score=162.69  Aligned_cols=53  Identities=42%  Similarity=1.078  Sum_probs=49.6

Q ss_pred             CCCCCCCccccccccccccceeeecCccccCCCCCCCCCCCCccchHHHHHHH
Q 030810          104 KAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAI  156 (171)
Q Consensus       104 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~i  156 (171)
                      .++..++||+.|+|||||++|+||||++||+.|||||+|+|+||||++||++|
T Consensus        10 ~~~~~~~rC~~C~kkvgl~~f~CrCg~~FC~~HR~~e~H~C~fDyk~~gr~~~   62 (64)
T 1wg2_A           10 RPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGSGPS   62 (64)
T ss_dssp             CCSCCSCSCTTTCCCCTTSCEECTTSCEECSSSCSSTTTTCCCCCSCSCCCSC
T ss_pred             CCCCcCCcChhhCCcccccCeEeecCCEecccCCCccccCCCcchhHHhHHHh
Confidence            44556899999999999999999999999999999999999999999999876

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.92  E-value=8e-26  Score=160.78  Aligned_cols=52  Identities=60%  Similarity=1.299  Sum_probs=48.2

Q ss_pred             CCCCCCCccccccccccccceeeecCccccCCCCCCCCCCCCccchHHHHHH
Q 030810          104 KAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREA  155 (171)
Q Consensus       104 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~  155 (171)
                      +.++.++||+.|+|||||++|.||||++||+.|||+|+|+|+||||++||++
T Consensus        20 ~~k~~~nRC~~CrKkvgL~gf~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~   71 (74)
T 1wfl_A           20 LPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEASGP   71 (74)
T ss_dssp             CCCSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSSCC
T ss_pred             cCCCcCCcChhhCCcccccCeecCCCCEechhcCCCccCCCcchhhhhchhh
Confidence            3455689999999999999999999999999999999999999999999864

>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1

Probab=99.91  E-value=6.1e-26  Score=161.38  Aligned_cols=54  Identities=46%  Similarity=1.081  Sum_probs=50.2

Q ss_pred             CCCCCCCCccccccccccccceeeecCccccCCCCCCCCCCCCccchHHHHHHH
Q 030810          103 VKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAI  156 (171)
Q Consensus       103 ~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~i  156 (171)
                      .++++.++||+.|+|||||++|.||||++||+.|||||+|+|+||||++||++|
T Consensus        19 ~~~k~~~~RC~~C~kkvgL~~f~CrCg~~FCs~HRy~e~H~C~fDyk~~gr~~~   72 (74)
T 1wfp_A           19 DPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVASGPS   72 (74)
T ss_dssp             CCTTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCCCCC
T ss_pred             ccCcccCccchhhcCcccccceEeccCCEeccccCCCcCCCCcCchhHHhHHhh
Confidence            345667899999999999999999999999999999999999999999999876

>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.91  E-value=3.4e-26  Score=160.10  Aligned_cols=55  Identities=29%  Similarity=0.746  Sum_probs=49.7

Q ss_pred             CCCCCCCCCccccccccccccc---eeeecCccccCCCCCCCCCCCCccchHHHHHHH
Q 030810          102 GVKAKEGPKRCTTCNKRVGLTG---FNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAI  156 (171)
Q Consensus       102 ~~~~~~~~~rC~~C~kkvgl~g---f~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~i  156 (171)
                      ..++++.++||+.|+|||||++   |+||||++||+.|||||+|+|+||||++||+.|
T Consensus         8 ~~~~~~~~~rC~~C~kk~gL~~~egf~CrCg~~FC~~HRy~e~H~C~fDyk~~gr~~~   65 (67)
T 1x4w_A            8 SRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGSGPS   65 (67)
T ss_dssp             CCCSCSCTTBCSSSCCBCCHHHHHHHCCSSSCCCCTTTCSTGGGTCSSCSSCSSCCCC
T ss_pred             CccCCccCCcchhhCCeecccccCceEecCCCEehhccCCccccCCcccccccccccc
Confidence            3345667899999999999995   999999999999999999999999999999764

>2kzy_A ZNF216-A20, zfand5 protein (zinc finger protein 216 (predicte isoform CRA_A); A20 domain, atrogene, metal binding Pro; NMR {Rattus norvegicus} PDB: 2l00_A

Probab=99.78  E-value=1.8e-19  Score=124.18  Aligned_cols=38  Identities=39%  Similarity=0.919  Sum_probs=34.0

Q ss_pred             CCCCccchhcCCCCCCccccCCchhHHHHHHHHHHHHH
Q 030810           11 APEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQEQA   48 (171)
Q Consensus        11 ~p~~p~lC~n~CGFfGs~at~n~CSkCyr~~~~~~~~~   48 (171)
                      +|++|+||+|||||||||+|+||||||||+++.+++++
T Consensus         9 ~~~~~~lC~ngCGFfGnpaT~nlCSkCyr~~~~~~~~~   46 (62)
T 2kzy_A            9 QTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS   46 (62)
T ss_dssp             CCSCCCBCTTCCSSBCCTTTTSCCHHHHHHHHHHHHHH
T ss_pred             CCCcccchhhCCCCcCChhhcCcCHHHHHHHHHhhhcc
Confidence            47789999999999999999999999999998766644

>2c7n_A Rabex-5, GEF 1, RAB guanine nucleotide exchange factor 1; protein-binding, ubiquitin binding domain, endocytosis, NUCL protein, polyprotein; 2.1A {Homo sapiens} SCOP: g.39.1.15 PDB: 2c7m_A 2fif_B 2fid_B

Probab=99.72  E-value=1.4e-18  Score=123.10  Aligned_cols=42  Identities=26%  Similarity=0.722  Sum_probs=27.2

Q ss_pred             cccCCCCCCCccchhcCCCCCCccccCCchhHHHHHHHHHHH
Q 030810            5 DETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKAMILNQE   46 (171)
Q Consensus         5 ~~~~~q~p~~p~lC~n~CGFfGs~at~n~CSkCyr~~~~~~~   46 (171)
                      +.++++.|++|+||+|||||||||+|+||||||||+...+..
T Consensus         6 ~~~~~q~pe~~~lC~ngCGFfGnpaT~nlCSkCyrd~~~k~~   47 (74)
T 2c7n_A            6 ERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKAR   47 (74)
T ss_dssp             ------------CCTTCSSSCCCGGGTTCCHHHHHHHHHHHH
T ss_pred             hhccCCCCCcchhHHhCCCCCCChhhcCccHHHHHHHHHHHH
Confidence            355688899999999999999999999999999999865443

>3oj3_I Tumor necrosis factor alpha-induced protein 3; ubiquitin, zinc finger, zinc ION, protein binding-hydrolase; 2.50A {Homo sapiens} PDB: 3oj4_C

Probab=99.58  E-value=6e-16  Score=101.67  Aligned_cols=28  Identities=21%  Similarity=0.599  Sum_probs=26.6

Q ss_pred             cchh-cCCCCCCccccCCchhHHHHHHHH
Q 030810           16 ILCV-NNCGFFGSAATMNMCSKCHKAMIL   43 (171)
Q Consensus        16 ~lC~-n~CGFfGs~at~n~CSkCyr~~~~   43 (171)
                      +||+ |||||||||+|+|||||||||++.
T Consensus        19 ~lC~~ngCGFfG~p~t~n~CSkCyre~~e   47 (49)
T 3oj3_I           19 SKCRKAGCVYFGTPENKGFCTLCFIEYRE   47 (49)
T ss_dssp             CBCSSTTCSSBCBGGGTTBCHHHHHHHHH
T ss_pred             cccccCCCCCccCcccCCcchHHHHHHHH
Confidence            7999 999999999999999999999864

>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=99.35  E-value=1.2e-13  Score=100.51  Aligned_cols=59  Identities=22%  Similarity=0.440  Sum_probs=49.8

Q ss_pred             CCCCCCcccc--ccccccccceeee-cCccccCCCCCCCCCCCCccchHHHHHHHHHhCCcccccccccC
Q 030810          105 AKEGPKRCTT--CNKRVGLTGFNCR-CGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAEKLDKI  171 (171)
Q Consensus       105 ~~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk~~~r~~i~k~Np~v~~~Ki~KI  171 (171)
                      .+..++||..  |+++ +|++|.|+ |+.+||..|||++.|+|+..       .+.+.++...+.++.+|
T Consensus        21 ~~~~~~~C~~~~Ck~~-~~l~f~C~~C~~~FC~~HR~~e~H~C~~~-------~~~k~~~~~~~~l~~~~   82 (86)
T 1wfe_A           21 DEHKSYSCSFKGCTDV-ELVAVICPYCEKNFCLRHRHQSDHDCEKL-------EVAKPRMAATQKLVRSG   82 (86)
T ss_dssp             SCSCCEECCSTTCCCE-ESSCEECTTTCCEECGGGCSTGGGTCSSS-------SCCCSSCCCCCCCSSCS
T ss_pred             cCCCCCCCCCcCCCCC-CccceECCCCCcccccccCCccCCCCCCC-------cccccchHHHHHHHHHH
Confidence            3456799998  9998 78999999 99999999999999999975       34677788777777765

>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=4.5e-13  Score=92.48  Aligned_cols=40  Identities=30%  Similarity=0.757  Sum_probs=36.8

Q ss_pred             CCCCCCcccc--ccccccccceeee-cCccccCCCCCCCCCCCC
Q 030810          105 AKEGPKRCTT--CNKRVGLTGFNCR-CGNLFCAVHRYSDKHGCP  145 (171)
Q Consensus       105 ~~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~  145 (171)
                      .+...+||..  |+++ +|++|.|+ |+.+||..|||+|+|+|+
T Consensus         8 ~k~~~~~Cs~~~Ck~~-~ll~f~C~~C~~~FC~~HR~~e~H~C~   50 (63)
T 1x4v_A            8 RKIFTNKCERAGCRQR-EMMKLTCERCSRNFCIKHRHPLDHDCS   50 (63)
T ss_dssp             CCTTCCCCCSTTCCCC-CSSCCBCSSSCCBCCHHHHSTTSSCCC
T ss_pred             CcccCCCCCccCCCCC-CccceECCCCCcccCcccCCccCCcCC
Confidence            4456799998  9998 89999999 999999999999999997

>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.24  E-value=2e-12  Score=92.01  Aligned_cols=41  Identities=34%  Similarity=0.806  Sum_probs=38.2

Q ss_pred             CCCcccc--ccccccccceeee-cCccccCCCCCCCCCCCCccch
Q 030810          108 GPKRCTT--CNKRVGLTGFNCR-CGNLFCAVHRYSDKHGCPFDYR  149 (171)
Q Consensus       108 ~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  149 (171)
                      ..+||..  |+++ +|++|+|+ |+.+||..|||++.|+|+++++
T Consensus        13 ~g~~Cs~~~C~~~-dflpf~C~~C~~~FC~~HR~~e~H~C~~~~~   56 (75)
T 1wys_A           13 IGQHCQVQHCRQR-DFLPFVCDGCSGIFCLEHRSKDSHGCSEVNV   56 (75)
T ss_dssp             CCCCCSCTTTCCC-SCCCEECTTTCCEECSTTCSSGGGTCCCCSS
T ss_pred             cCCCcCcccCCCc-cceeeECcccCcCcCcccCCccccCCCCCcc
Confidence            4689998  9987 79999999 9999999999999999999986

>2eqe_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}

Probab=97.87  E-value=7.8e-06  Score=53.09  Aligned_cols=29  Identities=24%  Similarity=0.694  Sum_probs=26.3

Q ss_pred             Cccchh-cCCCCCCccccCCchhHHHHHHH
Q 030810           14 GPILCV-NNCGFFGSAATMNMCSKCHKAMI   42 (171)
Q Consensus        14 ~p~lC~-n~CGFfGs~at~n~CSkCyr~~~   42 (171)
                      +...|. .||-|||+|.+.++|..||-++.
T Consensus        14 gt~kCRk~GC~fFGTpen~GFCTlCf~eyr   43 (48)
T 2eqe_A           14 GTSKCRKAGCVYFGTPENKGFCTLCFIEYS   43 (48)
T ss_dssp             CSSBCSSTTCCSBCCTTTTTCCHHHHHHHH
T ss_pred             ccchhhhcCCCcccCcccCceeeeehhhhh
Confidence            446897 99999999999999999999985

>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1

Probab=93.40  E-value=0.031  Score=38.21  Aligned_cols=27  Identities=41%  Similarity=1.117  Sum_probs=24.1

Q ss_pred             Ccccccccccccc--ceeee-cCccccCCC
Q 030810          110 KRCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       110 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ..|..|+++.+++  --.|| ||.+||+.+
T Consensus        12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~C   41 (73)
T 1vfy_A           12 DACMICSKKFSLLNRKHHCRSCGGVFCQEH   41 (73)
T ss_dssp             SBCTTTCCBCBTTBCCEECTTTCCEECGGG
T ss_pred             CcccCCCCccCCccccccCCCCCEEEcccc
Confidence            4799999999987  49999 999999875

>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A

Probab=92.98  E-value=0.052  Score=37.84  Aligned_cols=28  Identities=32%  Similarity=1.050  Sum_probs=24.2

Q ss_pred             CCcccccccccccc--ceeee-cCccccCCC
Q 030810          109 PKRCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ...|..|+++.+++  --.|| ||.+||+.+
T Consensus        19 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C   49 (82)
T 2yw8_A           19 ATHCRQCEKEFSISRRKHHCRNCGHIFCNTC   49 (82)
T ss_dssp             CCBCTTTCCBCBTTBCCEECTTTCCEECSGG
T ss_pred             CCcccCcCCcccCccccccCCCCCCEEChHH
Confidence            35799999999987  48999 999999864

>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.56  E-value=0.079  Score=36.98  Aligned_cols=28  Identities=32%  Similarity=0.776  Sum_probs=24.4

Q ss_pred             CCcccccccccccc--ceeee-cCccccCCC
Q 030810          109 PKRCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ...|..|.++.+|+  --.|| ||.+||+..
T Consensus        14 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C   44 (84)
T 1x4u_A           14 FGNCTGCSATFSVLKKRRSCSNCGNSFCSRC   44 (84)
T ss_dssp             CSSCSSSCCCCCSSSCCEECSSSCCEECTTT
T ss_pred             CCcCcCcCCccccchhhhhhcCCCcEEChhh
Confidence            45899999999987  48999 999999875

>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1

Probab=92.46  E-value=0.085  Score=37.46  Aligned_cols=28  Identities=32%  Similarity=0.898  Sum_probs=24.5

Q ss_pred             CCcccccccccccc--ceeee-cCccccCCC
Q 030810          109 PKRCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ...|..|+++.+++  --.|| ||.+||+.+
T Consensus         9 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~C   39 (88)
T 1wfk_A            9 ESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC   39 (88)
T ss_dssp             CSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred             CCCCcCcCCcccCccccccCCCCCCEEChhH
Confidence            45899999999987  48999 999999874

>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}

Probab=92.32  E-value=0.073  Score=37.22  Aligned_cols=29  Identities=28%  Similarity=0.713  Sum_probs=24.8

Q ss_pred             CCCcccccccccccc--ceeee-cCccccCCC
Q 030810          108 GPKRCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       108 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ....|..|+++.+++  --.|| ||.+||+.+
T Consensus        20 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~C   51 (84)
T 1z2q_A           20 DAPACNGCGCVFTTTVRRHHCRNCGYVLCGDC   51 (84)
T ss_dssp             TCCBCTTTCCBCCTTSCCEECTTTCCEECTGG
T ss_pred             CCCCCcCcCCccccchhcccccCCCcEEChHH
Confidence            346899999999987  48999 999999864

>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A

Probab=92.21  E-value=0.059  Score=40.56  Aligned_cols=28  Identities=43%  Similarity=1.060  Sum_probs=24.1

Q ss_pred             CCcccccccccccc--ceeee-cCccccCCC
Q 030810          109 PKRCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ...|..|+++.+++  -..|| ||.+||+.+
T Consensus        69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~C   99 (125)
T 1joc_A           69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAEC   99 (125)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCCCcCcCCccccccccccCCCCCeEEChHH
Confidence            45899999999987  48999 999999864

>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}

Probab=91.15  E-value=0.093  Score=37.24  Aligned_cols=28  Identities=36%  Similarity=1.025  Sum_probs=24.2

Q ss_pred             CCcccccccccccc--ceeee-cCccccCCC
Q 030810          109 PKRCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ...|..|.++.+++  -..|| ||.+||+..
T Consensus        20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~C   50 (90)
T 3t7l_A           20 APNCMNCQVKFTFTKRRHHCRACGKVFCGVC   50 (90)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGG
T ss_pred             CCcCcCCCCcccchhhCccccCCCCEECCcc
Confidence            46799999999987  59999 999998763

>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1

Probab=91.07  E-value=0.091  Score=42.34  Aligned_cols=28  Identities=32%  Similarity=0.917  Sum_probs=24.5

Q ss_pred             CCcccccccccccc--ceeee-cCccccCCC
Q 030810          109 PKRCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ...|..|+++.+++  --+|| ||.+||+.+
T Consensus       161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~C  191 (220)
T 1dvp_A          161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQC  191 (220)
T ss_dssp             CSBCTTTCCBCCSSSCCEECTTTCCEECSTT
T ss_pred             CCccCCCCCccCCcccccccCCcCCEEChHH
Confidence            36899999999987  49999 999999864

>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*

Probab=90.53  E-value=0.15  Score=41.61  Aligned_cols=28  Identities=32%  Similarity=1.025  Sum_probs=24.5

Q ss_pred             CCcccccccccccc--ceeee-cCccccCCC
Q 030810          109 PKRCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ...|..|+++.+++  -..|| ||.+||+.+
T Consensus       164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~C  194 (226)
T 3zyq_A          164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKC  194 (226)
T ss_dssp             CSBCTTTCCBCBTTBCCEECTTTCCEECTTT
T ss_pred             CCCCcCcCCCCCccccccccCCCcCEeChhh
Confidence            35899999999987  59999 999999864

>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1

Probab=88.81  E-value=0.16  Score=38.31  Aligned_cols=41  Identities=22%  Similarity=0.480  Sum_probs=28.4

Q ss_pred             CCcccccccccccc--ceeee-cCccccCC---CCCCCCCCCCccch
Q 030810          109 PKRCTTCNKRVGLT--GFNCR-CGNLFCAV---HRYSDKHGCPFDYR  149 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~---HRy~e~H~C~fDyk  149 (171)
                      ...|..|+++.+++  --.|| ||.+||+.   |+.+..--|..=|.
T Consensus        19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~   65 (120)
T 1y02_A           19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR   65 (120)
T ss_dssp             -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred             cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence            36899999999886  58999 99999875   46555555665444

>2eqf_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}

Probab=84.39  E-value=0.51  Score=30.04  Aligned_cols=25  Identities=24%  Similarity=0.580  Sum_probs=22.0

Q ss_pred             chhcCCCCCCccccCCchhHHHHHH
Q 030810           17 LCVNNCGFFGSAATMNMCSKCHKAM   41 (171)
Q Consensus        17 lC~n~CGFfGs~at~n~CSkCyr~~   41 (171)
                      -++.+|..|||..-+++|..||.-.
T Consensus        12 C~apgCdhygN~kc~GyCNeC~~fK   36 (46)
T 2eqf_A           12 CRAPACDHFGNAKCNGYCNECFQFK   36 (46)
T ss_dssp             CSSTTCCSCCBGGGTBSCHHHHHHH
T ss_pred             ccCcccccccchhhhhhhHHHHhhH
Confidence            4588999999999999999999643

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=84.23  E-value=0.44  Score=40.84  Aligned_cols=42  Identities=19%  Similarity=0.350  Sum_probs=27.8

Q ss_pred             CCCCccccccccc-ccc--ceeee-cCccccCCCCCCCCCCCCccch
Q 030810          107 EGPKRCTTCNKRV-GLT--GFNCR-CGNLFCAVHRYSDKHGCPFDYR  149 (171)
Q Consensus       107 ~~~~rC~~C~kkv-gl~--gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  149 (171)
                      ..+..|..|++.+ |+.  |++|| ||.++|..-.-.=. .|.-+.-
T Consensus       355 ~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~-~C~~~~~  400 (406)
T 2vrw_B          355 EETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVP-PCGRHGQ  400 (406)
T ss_dssp             SSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSC-CC-----
T ss_pred             CCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCC-CCCCCch
Confidence            4578999999988 674  99999 99999976422111 3876644

>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}

Probab=81.45  E-value=0.5  Score=31.41  Aligned_cols=24  Identities=33%  Similarity=0.987  Sum_probs=19.6

Q ss_pred             CCCccccccccccc--cceeee-cCcc
Q 030810          108 GPKRCTTCNKRVGL--TGFNCR-CGNL  131 (171)
Q Consensus       108 ~~~rC~~C~kkvgl--~gf~Cr-Cg~~  131 (171)
                      .+..|..|++++++  .+++|+ |+.+
T Consensus        18 ~~~~C~~Cg~~i~~gkq~~kC~dC~~~   44 (61)
T 4b6d_A           18 KPESCVPCGKRIKFGKLSLKCRDCRVV   44 (61)
T ss_dssp             SCEECTTTCCEECTTCEEEEESSSSCE
T ss_pred             CCcccccccCEEEEeeEeeECCCCCCe
Confidence            46799999999987  489999 8643

>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}

Probab=80.49  E-value=0.33  Score=41.73  Aligned_cols=28  Identities=29%  Similarity=0.758  Sum_probs=0.0

Q ss_pred             CCcccccccccccc--ceeee-cCccccCCC
Q 030810          109 PKRCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ...|..|+++.+++  ...|| ||.+||+.+
T Consensus       375 ~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~C  405 (434)
T 3mpx_A          375 VMMCMNCGCDFSLTLRRHHCHACGKIVCRNC  405 (434)
T ss_dssp             -------------------------------
T ss_pred             CCcCCCcCCCCCCcchhhhcccCcCEeehhh
Confidence            46899999999986  59999 999998653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	171
d1wffa_	85	g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog	2e-27
d1wfha_	64	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	7e-23
d1wfla_	74	g.80.1.1 (A:) Zinc finger A20 domain containing pr	1e-21
d1wfpa_	74	g.80.1.1 (A:) Zinc finger A20 and AN1 domains cont	2e-21
d2c7na1	56	g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-b	1e-12

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]} Length = 85

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 96.5 bits (240), Expect = 2e-27
 Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 1/63 (1%)

Query: 104 KAKEGPKRCTTCNKRVGL-TGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPV 162
             K+  K C  C K+ GL T F CRCGN FCA HRY++ HGC +DY++A R  + +ANPV
Sbjct: 20  TKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPV 79

Query: 163 VKA 165
              
Sbjct: 80  SGP 82

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 84.1 bits (208), Expect = 7e-23
 Identities = 31/63 (49%), Positives = 37/63 (58%)

Query: 95  GSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAARE 154
           GSS         + P RCT C KRVGLTGF CRCG  FC  HRY + HGC FD+++A   
Sbjct: 1   GSSGSSGQPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSG 60

Query: 155 AIA 157
             +
Sbjct: 61  PSS 63

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 81.1 bits (200), Expect = 1e-21
 Identities = 37/65 (56%), Positives = 42/65 (64%)

Query: 89  SMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDY 148
           S  PSS  S   A    K    RC  C K+VGLTGF+CRCGNLFC +HRYSDKH CP+DY
Sbjct: 5   SSGPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDY 64

Query: 149 RTAAR 153
           +  A 
Sbjct: 65  KAEAS 69

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 74

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 80.7 bits (199), Expect = 2e-21
 Identities = 28/69 (40%), Positives = 36/69 (52%)

Query: 89  SMEPSSGSSFGFAGVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDY 148
           S     G S        K    RC +CNK+VG+TGF CRCG+ FC  HRY + H C FD+
Sbjct: 5   SSGTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDF 64

Query: 149 RTAAREAIA 157
           +  A    +
Sbjct: 65  KGVASGPSS 73

>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: A20-like zinc finger
domain: RabGEF1 (Rabex-5), ubiquitin-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (139), Expect = 1e-12
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 17 LCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQLA 51
          LC   CG++G+ A    CSKC +       Q Q+ 
Sbjct: 1  LCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQ 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	171
d1wffa_	85	ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus	99.94
d1wfha_	64	Zinc finger A20 and AN1 domains containing protein	99.92
d1wfla_	74	Zinc finger A20 domain containing protein 2 {Mouse	99.91
d1wfpa_	74	Zinc finger A20 and AN1 domains containing protein	99.9
d2c7na1	56	RabGEF1 (Rabex-5), ubiquitin-binding domain {Human	99.67
d1wfea_	86	AN1-type zinc finger protein 1 {Mouse (Mus musculu	98.22
d1wfka_	88	Zinc finger FYVE domain containing protein 19 {Mou	95.04
d1vfya_	67	vps27p protein {Baker's yeast (Saccharomyces cerev	93.66
d1dvpa2	72	Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7	93.33
d1joca1	64	Eea1 {Human (Homo sapiens) [TaxId: 9606]}	92.86
d1zbdb_	124	Effector domain of rabphilin-3a {Rat (Rattus norve	92.33
d1y02a2	51	Rififylin (FYVE-RING finger protein Sakura) {Human	90.62
d1tbna_	66	Protein kinase c-gamma {Rat (Rattus rattus) [TaxId	82.66

>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: ANUBL1 (AN1, ubiquitin-like, homolog)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=5.8e-29  Score=179.45  Aligned_cols=63  Identities=48%  Similarity=1.023  Sum_probs=58.5

Q ss_pred             CCCCCCCcccccccccccc-ceeeecCccccCCCCCCCCCCCCccchHHHHHHHHHhCCccccc
Q 030810          104 KAKEGPKRCTTCNKRVGLT-GFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREAIAKANPVVKAE  166 (171)
Q Consensus       104 ~~~~~~~rC~~C~kkvgl~-gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~i~k~Np~v~~~  166 (171)
                      ..+..++||+.|+|||+|+ +|.||||++||+.|||||.|+|+||||+.||++|+++||+|.+.
T Consensus        20 ~kk~~~~RC~~C~KKl~l~~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~~k~~L~k~NP~i~p~   83 (85)
T d1wffa_          20 TKKKIMKHCFLCGKKTGLATSFECRCGNNFCASHRYAEAHGCNYDYKSAGRRYLEEANPVSGPS   83 (85)
T ss_dssp             CCCCCCCBCSSSCCBCSSSSCEECTTCCEECTTTCSTGGGTCCSCCSSSCCCCCCCCCCCCCTT
T ss_pred             cccccCCcChhcCCeecCCcCeecCCCCEehhhcCCCcCcCCCcchHHHHHHHHHHHCCccCCC
Confidence            4455678999999999995 89999999999999999999999999999999999999999874

>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At2g36320
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=1.6e-26  Score=158.69  Aligned_cols=52  Identities=54%  Similarity=1.242  Sum_probs=48.3

Q ss_pred             CCCCCCCccccccccccccceeeecCccccCCCCCCCCCCCCccchHHHHHH
Q 030810          104 KAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAREA  155 (171)
Q Consensus       104 ~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r~~  155 (171)
                      .++++++||+.|+|||+|++|+||||++||+.|||||.|+|+||||++||..
T Consensus        10 ~~~~k~~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~Gr~~   61 (64)
T d1wfha_          10 SPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGSGP   61 (64)
T ss_dssp             CCCSSCCCCTTTCCCCCTTCEECSSSCEECTTTCSTTTTTCCCCCSCCCCSC
T ss_pred             CCCCCCCcChhhCCCccceeeeccCCCEehhhcCCCcCcCCCCcchhccCCC
Confidence            3457789999999999999999999999999999999999999999999854

>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 domain containing protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=1.2e-25  Score=158.27  Aligned_cols=51  Identities=61%  Similarity=1.316  Sum_probs=46.4

Q ss_pred             CCCCCCCCccccccccccccceeeecCccccCCCCCCCCCCCCccchHHHH
Q 030810          103 VKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAR  153 (171)
Q Consensus       103 ~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r  153 (171)
                      .+++.+++||..|+|||||++|.||||++||++|||||.|+|+||||+.|.
T Consensus        19 ~~~k~k~~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~CtfDyK~~g~   69 (74)
T d1wfla_          19 ELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAS   69 (74)
T ss_dssp             CCCCSCTTBCSSSCCBCGGGCEECTTSCEECSSSCSTTTTTCCCCGGGTSS
T ss_pred             cCCCCCCCcChhhCCcccceeeEccCCCEehhhcCCCcCcCCCCccccccc
Confidence            344567899999999999999999999999999999999999999998763

>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: Zinc finger A20 and AN1 domains containing protein At1g12440
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=4.8e-25  Score=155.15  Aligned_cols=52  Identities=48%  Similarity=1.109  Sum_probs=48.3

Q ss_pred             CCCCCCCCCccccccccccccceeeecCccccCCCCCCCCCCCCccchHHHH
Q 030810          102 GVKAKEGPKRCTTCNKRVGLTGFNCRCGNLFCAVHRYSDKHGCPFDYRTAAR  153 (171)
Q Consensus       102 ~~~~~~~~~rC~~C~kkvgl~gf~CrCg~~FC~~HRy~e~H~C~fDyk~~~r  153 (171)
                      ..+++..++||+.|+|||+|++|.||||++||+.|||||.|+|+||||+.||
T Consensus        18 ~~~~k~kk~RC~~C~KKl~l~~~~CrCg~~FC~~HR~pe~H~C~fDyK~~gr   69 (74)
T d1wfpa_          18 LDPPKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAS   69 (74)
T ss_dssp             SCCTTCCCCBCSSSCCBCTTTCEECTTSCEECTTTCSTTTSCCCSCTTSCCC
T ss_pred             CCCCCCCCCcChhcCCccCCCceecCCCChhhhccCCccCcCCCCcchhccc
Confidence            3456677999999999999999999999999999999999999999999887

>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: A20-like zinc finger
domain: RabGEF1 (Rabex-5), ubiquitin-binding domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=9.8e-18  Score=111.58  Aligned_cols=33  Identities=36%  Similarity=0.835  Sum_probs=29.7

Q ss_pred             chhcCCCCCCccccCCchhHHHHHHHHHHHHHh
Q 030810           17 LCVNNCGFFGSAATMNMCSKCHKAMILNQEQAQ   49 (171)
Q Consensus        17 lC~n~CGFfGs~at~n~CSkCyr~~~~~~~~~~   49 (171)
                      ||+|||||||||+|+|||||||||+..++++..
T Consensus         1 lC~~gCGFyG~~~~~g~CSkCyr~~~~k~~q~~   33 (56)
T d2c7na1           1 LCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQ   33 (56)
T ss_dssp             CCTTCSSSCCCGGGTTCCHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCcccCCcchHHHHHHHHHHHHHH
Confidence            799999999999999999999999987766543

>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: AN1-like Zinc finger
superfamily: AN1-like Zinc finger
family: AN1-like Zinc finger
domain: AN1-type zinc finger protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.22  E-value=2e-07  Score=65.93  Aligned_cols=40  Identities=30%  Similarity=0.702  Sum_probs=34.3

Q ss_pred             CCCCCcccc--ccccccccceeee-cCccccCCCCCCCCCCCCc
Q 030810          106 KEGPKRCTT--CNKRVGLTGFNCR-CGNLFCAVHRYSDKHGCPF  146 (171)
Q Consensus       106 ~~~~~rC~~--C~kkvgl~gf~Cr-Cg~~FC~~HRy~e~H~C~f  146 (171)
                      .....+|..  |++ +.|+.|.|. |+..||..||+++.|.|.-
T Consensus        22 ~~~~~~Cs~~~C~~-~~~lp~~C~~C~~~FC~~Hr~~e~H~C~~   64 (86)
T d1wfea_          22 EHKSYSCSFKGCTD-VELVAVICPYCEKNFCLRHRHQSDHDCEK   64 (86)
T ss_dssp             CSCCEECCSTTCCC-EESSCEECTTTCCEECGGGCSTGGGTCSS
T ss_pred             CCccCcCCCCCCCC-cccCcccchhhCcchhhccCCccCCCCCC
Confidence            345678986  985 679999997 9999999999999999963

>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Zinc finger FYVE domain containing protein 19
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.04  E-value=0.0068  Score=41.70  Aligned_cols=29  Identities=31%  Similarity=0.827  Sum_probs=25.6

Q ss_pred             CCCcccccccccccc--ceeee-cCccccCCC
Q 030810          108 GPKRCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       108 ~~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ..++|..|+++.+|+  -..|| ||.+||..+
T Consensus         8 ~~s~C~~C~~~Fs~~~rrhhCr~CG~vfC~~C   39 (88)
T d1wfka_           8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGC   39 (88)
T ss_dssp             CCSBCTTTCCBCCSSSCEEECSSSCCEEETTT
T ss_pred             ccCcCcccCchhccccccccccccChhhChHH
Confidence            357899999999987  58999 999999876

>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: vps27p protein
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.66  E-value=0.015  Score=37.83  Aligned_cols=27  Identities=41%  Similarity=1.117  Sum_probs=23.8

Q ss_pred             Ccccccccccccc--ceeee-cCccccCCC
Q 030810          110 KRCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       110 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      ..|..|+++.+|+  --.|| ||.+||+.+
T Consensus         6 ~~C~~C~~~F~~~~rkhhCr~CG~~fC~~C   35 (67)
T d1vfya_           6 DACMICSKKFSLLNRKHHCRSCGGVFCQEH   35 (67)
T ss_dssp             SBCTTTCCBCBTTBCCEECTTTCCEECGGG
T ss_pred             cccccCCCcccCcccccccccCCCEecccc
Confidence            3599999999996  48999 999999876

>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Hrs
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.33  E-value=0.028  Score=36.97  Aligned_cols=28  Identities=32%  Similarity=0.934  Sum_probs=24.8

Q ss_pred             Ccccccccccccc--ceeee-cCccccCCCC
Q 030810          110 KRCTTCNKRVGLT--GFNCR-CGNLFCAVHR  137 (171)
Q Consensus       110 ~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  137 (171)
                      +.|..|+++.+++  --.|| ||.+||+.+-
T Consensus        14 ~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~   44 (72)
T d1dvpa2          14 RVCHRCRVEFTFTNRKHHCRNCGQVFCGQCT   44 (72)
T ss_dssp             SBCTTTCCBCCSSSCCEECTTTCCEECSTTS
T ss_pred             CccccCCCcccCccccccccccCCeeChhhh
Confidence            4699999999997  58999 9999998874

>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Eea1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.86  E-value=0.022  Score=36.58  Aligned_cols=29  Identities=41%  Similarity=1.021  Sum_probs=24.7

Q ss_pred             CCcccccccccccc--ceeee-cCccccCCCC
Q 030810          109 PKRCTTCNKRVGLT--GFNCR-CGNLFCAVHR  137 (171)
Q Consensus       109 ~~rC~~C~kkvgl~--gf~Cr-Cg~~FC~~HR  137 (171)
                      ...|..|+++.+++  --.|| ||.+||+..-
T Consensus         8 ~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs   39 (64)
T d1joca1           8 VQNCMACGKGFSVTVRRHHCRQCGNIFCAECS   39 (64)
T ss_dssp             CCBCTTTCCBCCSSSCCEECTTTCCEECGGGS
T ss_pred             CCcCcCcCCcccCCccccchhhhCCeeccccc
Confidence            35799999999997  58899 9999998653

>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Effector domain of rabphilin-3a
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.33  E-value=0.033  Score=39.76  Aligned_cols=30  Identities=27%  Similarity=0.789  Sum_probs=24.9

Q ss_pred             CCCcccccccccccc---ceeee-cCccccCCCC
Q 030810          108 GPKRCTTCNKRVGLT---GFNCR-CGNLFCAVHR  137 (171)
Q Consensus       108 ~~~rC~~C~kkvgl~---gf~Cr-Cg~~FC~~HR  137 (171)
                      ..+.|..|++.++++   +..|| ||.+||+.=+
T Consensus        47 ~~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~   80 (124)
T d1zbdb_          47 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG   80 (124)
T ss_dssp             SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred             CCCcCcccCCcccCCCCCCCcCccCCcccccCCC
Confidence            357899999999964   57899 9999998854

>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: FYVE, a phosphatidylinositol-3-phosphate binding domain
domain: Rififylin (FYVE-RING finger protein Sakura)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.62  E-value=0.045  Score=33.89  Aligned_cols=26  Identities=27%  Similarity=0.717  Sum_probs=22.8

Q ss_pred             cccccccccccc--ceeee-cCccccCCC
Q 030810          111 RCTTCNKRVGLT--GFNCR-CGNLFCAVH  136 (171)
Q Consensus       111 rC~~C~kkvgl~--gf~Cr-Cg~~FC~~H  136 (171)
                      -|..|+++.+++  -..|| ||.+||+..
T Consensus         2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~C   30 (51)
T d1y02a2           2 SCKSCGAHFANTARKQTCLDCKKNFCMTC   30 (51)
T ss_dssp             CCTTTCCCCSSGGGCEECTTTCCEECGGG
T ss_pred             CccccCCcccCCccCcccccCCcccCccc
Confidence            388999999996  48999 999999876

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=82.66  E-value=0.68  Score=29.05  Aligned_cols=42  Identities=24%  Similarity=0.406  Sum_probs=29.1

Q ss_pred             CCCcccccccccc-c--cceeee-cCccccCCCCCCCCCCCCccch
Q 030810          108 GPKRCTTCNKRVG-L--TGFNCR-CGNLFCAVHRYSDKHGCPFDYR  149 (171)
Q Consensus       108 ~~~rC~~C~kkvg-l--~gf~Cr-Cg~~FC~~HRy~e~H~C~fDyk  149 (171)
                      .+..|..|++.|- +  .||+|+ |+.+.=....-.=...|..++.
T Consensus        18 ~~~~C~~C~~~i~g~~~~g~~C~~C~~~~H~~C~~~v~~~C~~~~~   63 (66)
T d1tbna_          18 SPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHT   63 (66)
T ss_dssp             SCCBCSSSCCBCCTTSSSCEEETTTCCEECTTTTTTSCCCSSCCCC
T ss_pred             CCcCCcCCCCcccCcccCccccCcccCeEChHHhccccccCCCCcc
Confidence            4578999999884 4  389999 9887655554444456666553