BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030811
(171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1
Length = 172
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 114/166 (68%), Gaps = 1/166 (0%)
Query: 7 VAAAAVLLVAMTILVPEVDATRWIVGANQGWTNNVNYTIWAKDKHFYNGDWLFFVYDRNQ 66
+ A VL M +P V A ++ VG N+ W N+NYTIWA+ KHFY GDWL+FV+DRNQ
Sbjct: 7 LITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQ 66
Query: 67 MNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGKGFCYGGMKLAVRVE 126
N+LEVNKTDYE C +DHP+ NWT GAGRD+V LN T+HYY + GKG CYGGMKL+V+VE
Sbjct: 67 HNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVE 126
Query: 127 NPPPPPSASPIKEKSGTPSTLYRGQLVLP-AVFAIGAVWDAFVRFW 171
PPPP ++P+K Q ++P ++FA A+WD R W
Sbjct: 127 KLPPPPKSAPVKNIGSVSMVTGLAQFMIPVSLFAFPAMWDVISRMW 172
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1
Length = 189
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 13 LLVAMTILVPEVDATRWIVGANQGWTNNVNYTIWAKDKHFYNGDWLFFVYDRNQMNVLEV 72
LL + + +P + AT + VG GW +Y+ WA DK F GD L F Y V EV
Sbjct: 12 LLAIINMALPSL-ATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEV 70
Query: 73 NKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISG-KGFCYGGMKLAVRVE 126
++DY+SC S + + +TGA +PL +YFI G G GGMKL+++V+
Sbjct: 71 KESDYKSCTSGNSISTDSTGA--TTIPLKKAGKHYFICGVPGHSTGGMKLSIKVK 123
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 11/140 (7%)
Query: 12 VLLVAMTILVPEVDATRWIVGANQG-W----TNNVNYTIWAKDKHFYNGDWLFFVYDRNQ 66
V + ++ L A VG G W +++ ++T WA+ F GD++ F Y+ +
Sbjct: 14 VAIFSLIFLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGK 73
Query: 67 MNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISG-KGFCYGGMKLAVRV 125
+VLEV K Y SCN+ +PL N+T G + V L+ + +YFISG G C G KL++ V
Sbjct: 74 DSVLEVTKEAYNSCNTTNPLANYTDGETK--VKLDRSGPFYFISGANGHCEKGQKLSLVV 131
Query: 126 ENPPP---PPSASPIKEKSG 142
+P P+ SP++ + G
Sbjct: 132 ISPRHSVISPAPSPVEFEDG 151
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1
Length = 108
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 26 ATRWIVGANQGWTNNV--NYTIWAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSD 83
AT VG + GWT V +Y WA F+ GD L F Y+ NVL+V++ ++SCNS
Sbjct: 1 ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60
Query: 84 HPLHNWTTGAGRDVVPLNVTRHYYFISG-KGFCYGGMKLAVRVE 126
P ++T+GA D +PL +YF+ G G C G K+ ++V+
Sbjct: 61 SPAASYTSGA--DSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD 102
>sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520
PE=1 SV=1
Length = 349
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 12 VLLVAMTILVPEVDATRWIVGANQGWTNNV--NYTIWAKDKHFYNGDWLFFVYDRNQMNV 69
+L++++ L +A ++ VG + W N NY W+ F D L+F Y + +V
Sbjct: 14 TILLSLSTLFTISNARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSV 73
Query: 70 LEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISG-KGFCYGGMKLAVRV 125
LEVNK DY++CN+ +P+ G + L+ +YFISG + C G KL V V
Sbjct: 74 LEVNKADYDACNTKNPIKRVDDGDSE--ISLDRYGPFYFISGNEDNCKKGQKLNVVV 128
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1
Length = 187
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 8 AAAAVLLVAMTILVPEVDATRWIVGANQ-GW----TNNVNYTIWAKDKHFYNGDWLFFVY 62
A+ ++++AM +L+ +A +++VG ++ W + + + WA F GD L F Y
Sbjct: 8 ASPFLVMLAMCLLISTSEAEKYVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKY 67
Query: 63 DRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISG-KGFCYGGMKL 121
++ +V E N+TDYE CN+ H G G V L +FISG + C G+KL
Sbjct: 68 EKRTESVHEGNETDYEGCNTVGKYHIVFNG-GNTKVMLTKPGFRHFISGNQSHCQMGLKL 126
Query: 122 AVRV 125
AV V
Sbjct: 127 AVLV 130
>sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 SV=1
Length = 96
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 29 WIVGANQGWTNNVNYTIWAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHN 88
++VG + GWT N W K K F GD L F Y+ NV+ VN+ + +CN+
Sbjct: 3 YVVGGSGGWT--FNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKV 60
Query: 89 WTTGAGRDVVPLNVTRHYYFISGKGFCYGGMKLAV 123
+T+ GRD + L + Y+ + G C GMK+AV
Sbjct: 61 YTS--GRDQIKLPKGQSYFICNFPGHCQSGMKIAV 93
>sp|P93328|NO16_MEDTR Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1
Length = 180
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 12 VLLVAMTILVPEVDATRWIVG-ANQGWT----NNVNYTIWAKDKHFYNGDWLFFVYDRNQ 66
+++ +M +L+ ++T +++G ++ W + + WA F GD + F YD
Sbjct: 10 MIIFSMWLLISHSESTDYLIGDSHNSWKVPLPSRRAFARWASAHEFTVGDTILFEYDNET 69
Query: 67 MNVLEVNKTDYESC--NSDHPLHNWTTGAGRDVVPLNVTRHYYFISG-KGFCYGGMKLAV 123
+V EVN+ DY C N +H H+ G V L+ Y+FISG K C G+KLAV
Sbjct: 70 ESVHEVNEHDYIMCHTNGEHVEHH----DGNTKVVLDKIGVYHFISGTKRHCKMGLKLAV 125
Query: 124 RVEN 127
V+N
Sbjct: 126 VVQN 129
>sp|Q8LG89|BABL_ARATH Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=1 SV=2
Length = 129
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 8 AAAAVLLVAMTILVPEVD---ATRWIVGANQGWTNNVNYTIWAKDKHFYNGDWLFFVYDR 64
A A V L+A+++L+ + D A + VG + WT N W K KHF GD L F Y+
Sbjct: 12 ARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWT--FNAVGWPKGKHFRAGDVLVFNYNP 69
Query: 65 NQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGKGFCYGGMKLAV 123
NV++V+ Y +C + +T+ G+D + L+ ++++ + C MK+AV
Sbjct: 70 RMHNVVKVDSGSYNNCKTPTGAKPYTS--GKDRITLSKGQNFFICNFPNHCESDMKIAV 126
>sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1
Length = 107
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 27 TRWIVGANQGWT----NNVNYT-IWAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCN 81
T + VG + GW +V+Y WA +K F+ GD L F YDR NV +V + +Y+SCN
Sbjct: 1 TVYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCN 60
Query: 82 SDHPLHNWTTGAGRDVVPLNVTRHYYFISG-KGFCYGGMKLAVRV 125
P+ ++ TG R + L Y+I G C G K+ + V
Sbjct: 61 DTTPIASYNTGBBR--INLKTVGQKYYICGVPKHCDLGQKVHINV 103
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 46 WAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRH 105
WA+ F GD L + YD + +VL+V K Y +CN+ +P N++ G + V L +
Sbjct: 48 WAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTK--VKLERSGP 105
Query: 106 YYFISG-KGFCYGGMKLAVRV 125
Y+FISG K C G KL + V
Sbjct: 106 YFFISGSKSNCVEGEKLHIVV 126
>sp|Q5JNJ5|ENL1_ORYSJ Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica
GN=ENODL1 PE=1 SV=1
Length = 237
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 8 AAAAVLLVAMTILVPEVDATRWIVGANQGWTNN--VNYTIWAKDKHFYNGDWLFFVYDRN 65
AA + ++ + + +A + G GW + ++ WA+ F D + F++D
Sbjct: 10 AAWFMAVLGLVAVFSSSEAYVFYAGGRDGWVVDPAESFNYWAERNRFQVNDTIVFLHDDE 69
Query: 66 -QMNVLEVNKTDYESCNSDHPLHNWT-TGAGRDVVPLNVTRHYYFISG-KGFCYGGMKLA 122
+VL+V + D+++C++ +P+ AGR V + + ++FISG + C G KL
Sbjct: 70 VGGSVLQVTEGDFDTCSTGNPVQRLEDVAAGRSVFRFDRSGPFFFISGDEDRCQKGQKLY 129
Query: 123 VRV---------ENPPPPPSASPIKEKS 141
+ V E P P +A P+ KS
Sbjct: 130 IIVMAVRPTKPSEAPEPAGAAGPVSSKS 157
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1
Length = 202
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 37 WTNNVNYTIWAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGR- 95
WT V+Y+ WA K F GD L F Y + V V+K Y+ C++ N + G +
Sbjct: 36 WTTGVDYSGWATGKTFRVGDILEFKYGSSH-TVDVVDKAGYDGCDASSSTENHSDGDTKI 94
Query: 96 DVVPLNVTRHYYFISGKGFCY--GGMKLAVRV 125
D+ + + +Y+ S G C GGMKLAV V
Sbjct: 95 DLKTVGI--NYFICSTPGHCRTNGGMKLAVNV 124
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2
Length = 196
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 29 WIVGANQGWTNNVN---YTIWAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHP 85
+ VG + WT ++ YT WA K F GD L F + + +V V++ +E+C + P
Sbjct: 25 YDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKP 84
Query: 86 LHNWTTGAGRDVVPLNVTRHYYFISGKG-FCYGGMKLAVRV 125
+ + T + + LN T YFI G C G KL++ V
Sbjct: 85 ISHMTVPPVK--IMLNTTGPQYFICTVGDHCRFGQKLSITV 123
>sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1
Length = 126
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 29 WIVGANQGWTNNVNYTIWAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHN 88
+ VG GWT + W K F GD L F Y+ NV+ V Y+SC +
Sbjct: 33 YTVGDGGGWT--FGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPGSRV 90
Query: 89 WTTGAGRDVVPLNVTRHYYFISGKGFCYGGMKLAV 123
+ +G D + L+ +Y+ S G C GG+K+AV
Sbjct: 91 FKSG--DDRITLSRGTNYFICSVPGHCQGGLKIAV 123
>sp|P93329|NO20_MEDTR Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1
Length = 268
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 5 MTVAAAAVLLVAMTI--LVPEVDATRWIVGANQ-GWT----NNVNYTIWAKDKHFYNGDW 57
M+ ++ +L+ +I L+ ++T ++VG ++ W T WA + F GD
Sbjct: 1 MSSSSPILLMFIFSIWMLISYSESTDYLVGDSENSWKFPLPTRHALTRWASNYQFIVGDT 60
Query: 58 LFFVYDRNQMNVLEVNKTDYESC--NSDHPLHNWTTGAGRDVVPLNVTRHYYFISGKG-F 114
+ F Y+ +V EV + DY+ C +H H G +V L T ++FISGK
Sbjct: 61 ITFQYNNKTESVHEVEEEDYDRCGIRGEHVDHY----DGNTMVVLKKTGIHHFISGKKRH 116
Query: 115 CYGGMKLAVRVENPP 129
C G+KLAV V P
Sbjct: 117 CRLGLKLAVVVMVAP 131
>sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1
Length = 115
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 29 WIVGANQGWTNNVN---YTIWAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHP 85
+ VG + W + Y WA K F GD L F + +V V K +++C ++P
Sbjct: 3 YDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENP 62
Query: 86 LHNWTTGAGRDVVPLNVTRHYYFISGKG-FCYGGMKLAVRV 125
+ + TT + + LN T Y+I G C G KL++ V
Sbjct: 63 ISHMTTPPVK--IMLNTTGPQYYICTVGDHCRVGQKLSINV 101
>sp|Q05544|NO551_SOYBN Early nodulin-55-1 (Fragment) OS=Glycine max GN=ENOD55-1 PE=2 SV=1
Length = 137
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 62 YDRNQMNVLEVNKTDYESCNS---DHPLHNWTTGAGRDVVPLNVTRHYYFISG-KGFCYG 117
YD +V EVN+TDYE CN+ +H L N G V L + +FISG + C
Sbjct: 2 YDERTESVHEVNETDYEQCNTVGKEHVLFN----DGNTKVMLTKSGFRHFISGNQSHCQM 57
Query: 118 GMKLAVRV 125
G+KL V V
Sbjct: 58 GLKLMVVV 65
>sp|Q61554|FBN1_MOUSE Fibrillin-1 OS=Mus musculus GN=Fbn1 PE=1 SV=1
Length = 2871
Score = 32.0 bits (71), Expect = 2.0, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 107 YFISGKGFCYGGMKLAVRVENPPPPPSASPIKEKSGTPSTLYRGQL 152
YF G+G C GM + P PP++S + + S +P Y ++
Sbjct: 2678 YFRIGQGHCLSGMGMG---RGAPEPPASSEMDDNSLSPEACYECKI 2720
>sp|C5P7J2|AMPP1_COCP7 Probable Xaa-Pro aminopeptidase P OS=Coccidioides posadasii (strain
C735) GN=AMPP PE=3 SV=1
Length = 651
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 15 VAMTILVPEVDATRWIVGANQGWTNNVNYTIWAKDKHFYNGDWL 58
V MT L + T + + W N+ + +W K K F+N D L
Sbjct: 596 VTMTPLCQNLMDTSLLTAEEKKWVNDYHTEVWEKTKGFFNNDEL 639
>sp|E9CTR7|AMPP1_COCPS Probable Xaa-Pro aminopeptidase P OS=Coccidioides posadasii (strain
RMSCC 757 / Silveira) GN=AMPP PE=3 SV=1
Length = 611
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 15 VAMTILVPEVDATRWIVGANQGWTNNVNYTIWAKDKHFYNGDWL 58
V MT L + T + + W N+ + +W K K F+N D L
Sbjct: 556 VTMTPLCQNLMDTSLLTAEEKKWVNDYHTEVWEKTKGFFNNDEL 599
>sp|Q6FVV7|RRT5_CANGA Regulator of rDNA transcription protein 5 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=RRT5 PE=3 SV=1
Length = 443
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 104 RHYYFISGKGFCYGGMKLAVRVENPPPPPSASPIKEKSGT 143
R ++GK F GG L VR NP PP PIKE+ GT
Sbjct: 65 RAVEELNGKEF--GGRVLRVRTHNPYQPP--KPIKERFGT 100
>sp|Q9SZB2|TIC22_ARATH Protein TIC 22, chloroplastic OS=Arabidopsis thaliana GN=TIC22 PE=1
SV=1
Length = 268
Score = 30.4 bits (67), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 124 RVENPPPPPSASPIKEKSGTPSTLYRGQLVLPA-----VFAIGAVWDAFV 168
R P PPP AS + KSGTP+T LV A VF + + FV
Sbjct: 46 RFSLPTPPPFASVSQSKSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFV 95
>sp|P01867|IGG2B_MOUSE Ig gamma-2B chain C region OS=Mus musculus GN=Igh-3 PE=1 SV=3
Length = 404
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 23 EVDATRWIVGANQG-----WTNNVNYTIWAKDKH-FYNGDWLFFVYDRNQMNVLEVNKTD 76
+V T +VG N G WT+N + KD + D +F+Y + M + KTD
Sbjct: 250 DVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTD 309
Query: 77 YESCNSDH 84
SCN H
Sbjct: 310 SFSCNVRH 317
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,662,708
Number of Sequences: 539616
Number of extensions: 3367461
Number of successful extensions: 11002
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 10941
Number of HSP's gapped (non-prelim): 53
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)