Query 030813
Match_columns 171
No_of_seqs 148 out of 1072
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 04:57:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030813.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030813hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07214 Pat17_isozyme_like Pat 100.0 3.5E-35 7.6E-40 243.8 16.1 157 9-168 1-157 (349)
2 cd07215 Pat17_PNPLA8_PNPLA9_li 100.0 1.3E-32 2.9E-37 226.8 14.0 149 13-167 1-150 (329)
3 cd07211 Pat_PNPLA8 Patatin-lik 100.0 6.7E-30 1.5E-34 208.9 14.7 146 5-168 1-153 (308)
4 cd07217 Pat17_PNPLA8_PNPLA9_li 100.0 2.2E-29 4.7E-34 208.5 13.7 140 12-165 1-143 (344)
5 cd07216 Pat17_PNPLA8_PNPLA9_li 100.0 7.1E-29 1.5E-33 203.1 13.5 143 12-167 1-155 (309)
6 cd07212 Pat_PNPLA9 Patatin-lik 100.0 2.9E-28 6.3E-33 199.7 13.1 123 14-168 1-127 (312)
7 cd07213 Pat17_PNPLA8_PNPLA9_li 100.0 1.4E-27 3E-32 193.8 14.4 131 11-166 1-140 (288)
8 KOG4231 Intracellular membrane 99.9 8.8E-27 1.9E-31 196.0 7.4 147 3-168 408-563 (763)
9 cd07205 Pat_PNPLA6_PNPLA7_NTE1 99.9 2.9E-24 6.3E-29 162.3 13.1 122 14-165 2-123 (175)
10 cd07207 Pat_ExoU_VipD_like Exo 99.9 5.2E-24 1.1E-28 163.0 12.1 129 15-166 2-143 (194)
11 cd07228 Pat_NTE_like_bacteria 99.9 1.5E-23 3.3E-28 158.6 11.8 121 14-165 2-123 (175)
12 cd07210 Pat_hypo_W_succinogene 99.9 2.7E-23 5.8E-28 162.8 11.8 122 14-165 2-123 (221)
13 COG3621 Patatin [General funct 99.9 5.4E-23 1.2E-27 165.5 11.5 140 10-163 7-150 (394)
14 cd07225 Pat_PNPLA6_PNPLA7 Pata 99.9 5.7E-23 1.2E-27 167.9 11.5 127 11-165 14-142 (306)
15 cd07199 Pat17_PNPLA8_PNPLA9_li 99.9 1.4E-22 3E-27 161.9 10.1 97 14-167 1-97 (258)
16 PRK10279 hypothetical protein; 99.9 2.3E-21 5E-26 158.0 12.1 126 10-165 3-128 (300)
17 cd07227 Pat_Fungal_NTE1 Fungal 99.9 3.1E-21 6.7E-26 155.0 11.7 129 11-165 9-137 (269)
18 cd07209 Pat_hypo_Ecoli_Z1214_l 99.8 5.9E-20 1.3E-24 143.3 10.3 107 15-165 1-110 (215)
19 cd07218 Pat_iPLA2 Calcium-inde 99.8 1.1E-19 2.4E-24 144.4 11.6 125 14-168 2-127 (245)
20 cd07208 Pat_hypo_Ecoli_yjju_li 99.8 3.4E-20 7.3E-25 148.7 8.4 122 15-166 1-126 (266)
21 cd07204 Pat_PNPLA_like Patatin 99.8 2.3E-19 5E-24 142.4 11.5 126 15-168 2-128 (243)
22 cd07222 Pat_PNPLA4 Patatin-lik 99.8 1.2E-19 2.6E-24 144.3 9.9 128 14-168 1-129 (246)
23 cd07221 Pat_PNPLA3 Patatin-lik 99.8 6.2E-19 1.3E-23 140.6 12.6 127 14-168 2-129 (252)
24 cd07219 Pat_PNPLA1 Patatin-lik 99.8 6.5E-19 1.4E-23 146.2 11.3 131 10-168 10-141 (382)
25 cd07198 Patatin Patatin-like p 99.8 6.6E-19 1.4E-23 132.8 10.0 115 15-163 1-118 (172)
26 COG1752 RssA Predicted esteras 99.8 1.8E-18 3.9E-23 141.5 11.8 135 9-165 8-146 (306)
27 cd07220 Pat_PNPLA2 Patatin-lik 99.8 1.8E-18 3.8E-23 137.7 11.3 129 12-168 4-133 (249)
28 cd07232 Pat_PLPL Patain-like p 99.7 2E-17 4.3E-22 139.9 12.3 133 11-167 66-204 (407)
29 cd07230 Pat_TGL4-5_like Triacy 99.7 3.2E-17 6.9E-22 139.2 11.4 131 10-162 71-210 (421)
30 cd07224 Pat_like Patatin-like 99.7 8.2E-17 1.8E-21 127.1 9.8 118 14-166 1-121 (233)
31 cd07229 Pat_TGL3_like Triacylg 99.7 1.5E-16 3.4E-21 133.1 11.9 138 11-168 82-236 (391)
32 cd07223 Pat_PNPLA5-mammals Pat 99.7 3.4E-16 7.3E-21 129.9 11.1 131 10-168 7-138 (405)
33 KOG2968 Predicted esterase of 99.6 2.2E-16 4.7E-21 140.2 5.0 127 11-164 838-965 (1158)
34 cd07231 Pat_SDP1-like Sugar-De 99.5 1.9E-13 4.1E-18 111.5 9.5 59 11-88 67-125 (323)
35 PF01734 Patatin: Patatin-like 99.5 1.7E-14 3.7E-19 108.0 1.8 113 15-143 1-115 (204)
36 TIGR03607 patatin-related prot 99.4 2.2E-12 4.8E-17 115.5 12.9 140 13-164 4-181 (739)
37 cd07206 Pat_TGL3-4-5_SDP1 Tria 99.4 1.7E-12 3.7E-17 105.4 9.3 50 11-71 68-117 (298)
38 cd01819 Patatin_and_cPLA2 Pata 99.4 1.2E-12 2.7E-17 97.2 7.8 46 15-69 1-46 (155)
39 COG4667 Predicted esterase of 99.4 1.6E-12 3.5E-17 102.8 8.0 127 6-162 5-135 (292)
40 KOG0513 Ca2+-independent phosp 99.3 3.8E-12 8.2E-17 109.8 7.7 163 6-169 29-207 (503)
41 KOG2214 Predicted esterase of 99.1 1.6E-10 3.4E-15 98.4 6.9 133 11-167 173-314 (543)
42 KOG3773 Adiponutrin and relate 98.4 1.9E-07 4E-12 76.3 2.8 126 12-167 6-133 (354)
43 cd00147 cPLA2_like Cytosolic p 98.4 9.4E-07 2E-11 75.6 6.4 55 8-71 39-95 (438)
44 KOG0513 Ca2+-independent phosp 98.1 1.2E-06 2.6E-11 76.1 2.6 124 10-167 292-418 (503)
45 cd07202 cPLA2_Grp-IVC Group IV 96.9 0.00097 2.1E-08 56.8 3.9 54 8-70 36-90 (430)
46 cd07201 cPLA2_Grp-IVB-IVD-IVE- 96.4 0.0077 1.7E-07 52.8 5.7 54 9-71 51-105 (541)
47 KOG1325 Lysophospholipase [Lip 95.5 0.0078 1.7E-07 53.0 1.9 82 8-96 45-127 (571)
48 cd07200 cPLA2_Grp-IVA Group IV 95.3 0.022 4.8E-07 49.8 4.2 52 9-69 42-94 (505)
49 cd07203 cPLA2_Fungal_PLB Funga 95.1 0.023 5E-07 50.1 3.7 71 9-85 61-134 (552)
50 PF01735 PLA2_B: Lysophospholi 95.1 0.028 6.2E-07 49.2 4.2 58 13-71 1-59 (491)
51 smart00022 PLAc Cytoplasmic ph 94.7 0.037 8E-07 49.0 3.8 62 9-72 74-136 (549)
52 PF05728 UPF0227: Uncharacteri 80.5 3.4 7.3E-05 31.5 4.5 18 53-70 61-78 (187)
53 TIGR01392 homoserO_Ac_trn homo 80.2 7.9 0.00017 31.9 7.0 19 53-71 129-147 (351)
54 PRK00175 metX homoserine O-ace 80.2 4.8 0.0001 33.8 5.7 19 53-71 149-167 (379)
55 PF00698 Acyl_transf_1: Acyl t 79.9 4.8 0.0001 32.9 5.5 44 26-87 70-113 (318)
56 smart00827 PKS_AT Acyl transfe 79.0 6.2 0.00014 31.6 5.9 20 51-70 82-101 (298)
57 TIGR00128 fabD malonyl CoA-acy 76.5 8.3 0.00018 30.7 5.9 20 51-70 83-102 (290)
58 TIGR03131 malonate_mdcH malona 75.3 9.2 0.0002 30.8 5.9 29 51-86 76-104 (295)
59 PLN02752 [acyl-carrier protein 73.3 14 0.0003 30.6 6.6 21 50-70 123-143 (343)
60 PF00756 Esterase: Putative es 71.9 10 0.00022 29.3 5.2 19 53-71 117-135 (251)
61 COG0331 FabD (acyl-carrier-pro 69.9 17 0.00037 30.0 6.3 37 25-70 68-104 (310)
62 PF06361 RTBV_P12: Rice tungro 66.8 3.1 6.6E-05 27.7 1.0 43 21-66 46-88 (110)
63 PF03575 Peptidase_S51: Peptid 66.3 2.5 5.3E-05 30.9 0.6 13 53-65 70-82 (154)
64 KOG2551 Phospholipase/carboxyh 66.0 7.9 0.00017 30.6 3.3 33 30-70 91-123 (230)
65 PF01764 Lipase_3: Lipase (cla 64.6 5.1 0.00011 28.0 2.0 17 54-70 67-83 (140)
66 PF03959 FSH1: Serine hydrolas 63.4 9.5 0.00021 29.3 3.4 20 51-70 102-121 (212)
67 PF12611 DUF3766: Protein of u 62.5 4.7 0.0001 20.3 1.0 20 147-166 2-21 (24)
68 PF07859 Abhydrolase_3: alpha/ 58.4 7.4 0.00016 29.2 2.0 17 54-70 74-90 (211)
69 PRK06489 hypothetical protein; 58.2 13 0.00027 30.9 3.5 21 51-71 154-174 (360)
70 PF07812 TfuA: TfuA-like prote 57.2 16 0.00034 26.0 3.3 47 25-90 10-56 (120)
71 COG0657 Aes Esterase/lipase [L 54.8 15 0.00034 29.6 3.4 20 52-71 153-172 (312)
72 PRK05282 (alpha)-aspartyl dipe 53.6 16 0.00035 28.9 3.2 15 53-67 114-128 (233)
73 cd00312 Esterase_lipase Estera 53.5 21 0.00046 30.8 4.3 40 27-71 157-196 (493)
74 PRK04940 hypothetical protein; 53.2 32 0.00069 26.2 4.6 42 25-69 37-78 (180)
75 PRK06765 homoserine O-acetyltr 52.2 23 0.00049 30.1 4.1 22 50-71 160-181 (389)
76 PF00135 COesterase: Carboxyle 50.4 14 0.0003 31.9 2.6 44 21-69 182-226 (535)
77 PRK13604 luxD acyl transferase 49.1 49 0.0011 27.4 5.4 52 8-70 61-127 (307)
78 cd00741 Lipase Lipase. Lipase 48.8 15 0.00032 26.4 2.2 17 54-70 31-47 (153)
79 KOG1454 Predicted hydrolase/ac 48.3 42 0.0009 27.8 5.0 54 12-71 87-148 (326)
80 PRK08775 homoserine O-acetyltr 47.6 30 0.00064 28.4 4.1 19 53-71 140-158 (343)
81 PF08250 Sperm_act_pep: Sperm- 45.6 8.5 0.00018 15.2 0.3 8 15-22 2-9 (10)
82 PRK07581 hypothetical protein; 45.4 29 0.00062 28.3 3.6 20 52-71 125-144 (339)
83 PRK11071 esterase YqiA; Provis 45.1 75 0.0016 23.8 5.7 19 53-71 63-81 (190)
84 cd00519 Lipase_3 Lipase (class 44.8 17 0.00037 28.0 2.1 17 54-70 131-147 (229)
85 PF09752 DUF2048: Uncharacteri 44.6 30 0.00065 29.2 3.6 20 52-71 176-195 (348)
86 TIGR03695 menH_SHCHC 2-succiny 43.9 17 0.00036 26.8 1.9 18 54-71 73-90 (251)
87 COG1647 Esterase/lipase [Gener 43.7 17 0.00036 28.9 1.8 18 54-71 88-105 (243)
88 PF00975 Thioesterase: Thioest 43.5 33 0.00073 25.8 3.6 18 52-69 67-84 (229)
89 PRK10673 acyl-CoA esterase; Pr 42.6 19 0.0004 27.5 2.0 18 54-71 84-101 (255)
90 COG2267 PldB Lysophospholipase 42.4 44 0.00096 27.2 4.3 23 50-72 106-128 (298)
91 PF12697 Abhydrolase_6: Alpha/ 42.4 19 0.00041 26.1 2.0 19 53-71 68-86 (228)
92 KOG1516 Carboxylesterase and r 41.9 42 0.0009 29.4 4.3 46 21-71 169-215 (545)
93 PHA02857 monoglyceride lipase; 41.8 19 0.00041 28.1 2.0 18 54-71 100-117 (276)
94 TIGR03056 bchO_mg_che_rel puta 41.1 38 0.00082 25.9 3.6 18 54-71 98-115 (278)
95 KOG1515 Arylacetamide deacetyl 41.0 18 0.00038 30.3 1.7 19 53-71 168-186 (336)
96 PLN02298 hydrolase, alpha/beta 40.9 38 0.00082 27.4 3.7 18 53-70 136-153 (330)
97 TIGR01250 pro_imino_pep_2 prol 40.5 20 0.00043 27.3 1.9 19 53-71 98-116 (288)
98 cd03129 GAT1_Peptidase_E_like 39.2 20 0.00043 27.5 1.6 15 54-68 116-130 (210)
99 PRK11126 2-succinyl-6-hydroxy- 38.4 23 0.00051 26.8 2.0 20 52-71 67-86 (242)
100 PRK10162 acetyl esterase; Prov 38.1 23 0.0005 28.9 2.0 17 54-70 157-173 (318)
101 PF07819 PGAP1: PGAP1-like pro 38.1 22 0.00049 27.7 1.8 19 52-70 86-104 (225)
102 PF00326 Peptidase_S9: Prolyl 38.0 24 0.00052 26.5 2.0 17 54-70 67-83 (213)
103 TIGR02069 cyanophycinase cyano 37.4 18 0.0004 28.8 1.3 14 53-66 117-130 (250)
104 TIGR02240 PHA_depoly_arom poly 36.7 26 0.00056 27.4 2.0 20 51-71 92-111 (276)
105 PF00561 Abhydrolase_1: alpha/ 36.6 69 0.0015 23.5 4.3 35 27-71 30-64 (230)
106 PRK10566 esterase; Provisional 36.4 23 0.0005 27.1 1.7 18 54-71 110-127 (249)
107 COG3150 Predicted esterase [Ge 36.3 56 0.0012 24.9 3.6 35 28-69 43-77 (191)
108 PLN02965 Probable pheophorbida 36.3 24 0.00052 27.3 1.8 19 53-71 74-92 (255)
109 TIGR03611 RutD pyrimidine util 36.0 27 0.00058 26.2 1.9 17 54-70 83-99 (257)
110 COG3509 LpqC Poly(3-hydroxybut 35.9 56 0.0012 27.1 3.8 45 23-71 120-164 (312)
111 PF12695 Abhydrolase_5: Alpha/ 35.8 29 0.00063 23.8 2.0 19 52-70 62-80 (145)
112 TIGR02427 protocat_pcaD 3-oxoa 35.7 26 0.00057 25.9 1.8 18 54-71 82-99 (251)
113 TIGR02821 fghA_ester_D S-formy 34.0 28 0.0006 27.7 1.8 19 53-71 140-158 (275)
114 cd03145 GAT1_cyanophycinase Ty 33.9 26 0.00055 27.2 1.5 16 53-68 118-133 (217)
115 TIGR01840 esterase_phb esteras 33.4 59 0.0013 24.5 3.5 19 53-71 97-115 (212)
116 PRK05077 frsA fermentation/res 33.0 1.1E+02 0.0024 26.1 5.4 18 54-71 268-285 (414)
117 PRK10749 lysophospholipase L2; 32.9 31 0.00066 28.2 1.9 17 54-70 134-150 (330)
118 PLN02408 phospholipase A1 32.8 90 0.0019 26.5 4.7 17 54-70 203-219 (365)
119 PLN02385 hydrolase; alpha/beta 32.6 29 0.00062 28.5 1.7 19 53-71 164-182 (349)
120 TIGR01738 bioH putative pimelo 32.4 34 0.00074 25.2 2.0 18 53-70 67-84 (245)
121 PRK03592 haloalkane dehalogena 32.3 33 0.00071 27.1 2.0 19 53-71 95-113 (295)
122 PLN02824 hydrolase, alpha/beta 32.2 34 0.00074 27.0 2.1 18 54-71 105-122 (294)
123 PRK14875 acetoin dehydrogenase 31.8 1.1E+02 0.0024 24.8 5.1 18 54-71 200-217 (371)
124 TIGR02813 omega_3_PfaA polyket 31.6 1E+02 0.0023 33.0 5.7 19 51-69 674-692 (2582)
125 TIGR03343 biphenyl_bphD 2-hydr 30.8 33 0.00071 26.6 1.7 18 54-71 104-121 (282)
126 PRK00870 haloalkane dehalogena 30.5 36 0.00079 27.0 2.0 18 54-71 118-135 (302)
127 TIGR01249 pro_imino_pep_1 prol 29.3 40 0.00087 27.0 2.0 17 54-70 98-114 (306)
128 COG2819 Predicted hydrolase of 29.1 75 0.0016 25.8 3.5 51 15-70 106-156 (264)
129 PRK10439 enterobactin/ferric e 29.1 2.6E+02 0.0056 24.0 7.0 19 53-71 290-308 (411)
130 PRK10985 putative hydrolase; P 28.2 68 0.0015 26.0 3.2 17 53-69 133-149 (324)
131 COG2272 PnbA Carboxylesterase 27.9 1.1E+02 0.0023 27.2 4.4 39 27-70 161-199 (491)
132 PLN02571 triacylglycerol lipas 27.8 1.2E+02 0.0027 26.2 4.8 17 54-70 229-245 (413)
133 PRK10349 carboxylesterase BioH 27.8 45 0.00097 25.6 2.0 21 50-71 74-94 (256)
134 TIGR02816 pfaB_fam PfaB family 25.9 1.2E+02 0.0026 27.2 4.5 21 50-70 264-284 (538)
135 COG3340 PepE Peptidase E [Amin 25.9 49 0.0011 26.1 1.8 42 14-66 87-132 (224)
136 PRK11460 putative hydrolase; P 25.7 1.2E+02 0.0025 23.5 4.0 19 53-71 105-123 (232)
137 TIGR01607 PST-A Plasmodium sub 25.6 39 0.00085 27.7 1.4 18 52-69 143-160 (332)
138 PLN02211 methyl indole-3-aceta 25.3 48 0.001 26.3 1.8 18 54-71 90-107 (273)
139 cd04059 Peptidases_S8_Protein_ 25.3 80 0.0017 25.1 3.1 42 50-91 254-295 (297)
140 TIGR03101 hydr2_PEP hydrolase, 25.0 52 0.0011 26.4 2.0 19 53-71 101-119 (266)
141 PLN02578 hydrolase 25.0 52 0.0011 27.1 2.0 19 53-71 154-172 (354)
142 TIGR02530 flg_new flagellar op 24.9 52 0.0011 22.4 1.6 24 143-166 69-92 (96)
143 PLN02652 hydrolase; alpha/beta 24.7 52 0.0011 27.9 2.0 18 53-70 210-227 (395)
144 cd04852 Peptidases_S8_3 Peptid 24.2 46 0.001 26.9 1.5 41 50-90 264-304 (307)
145 PLN02324 triacylglycerol lipas 24.0 1.6E+02 0.0034 25.6 4.7 17 54-70 218-234 (415)
146 PLN02894 hydrolase, alpha/beta 23.8 55 0.0012 27.7 2.0 18 54-71 179-196 (402)
147 COG0578 GlpA Glycerol-3-phosph 23.8 48 0.001 29.6 1.6 40 15-62 15-54 (532)
148 KOG3724 Negative regulator of 23.5 53 0.0012 31.0 1.9 19 53-71 184-202 (973)
149 COG4065 Uncharacterized protei 23.1 73 0.0016 26.8 2.4 27 138-164 40-66 (480)
150 TIGR03100 hydr1_PEP hydrolase, 22.9 61 0.0013 25.7 2.0 18 54-71 103-120 (274)
151 COG2021 MET2 Homoserine acetyl 22.9 1.2E+02 0.0027 25.8 3.8 21 50-70 146-166 (368)
152 PLN02442 S-formylglutathione h 22.9 56 0.0012 26.1 1.8 19 53-71 145-163 (283)
153 cd00707 Pancreat_lipase_like P 22.8 64 0.0014 25.8 2.1 18 54-71 115-132 (275)
154 PLN02847 triacylglycerol lipas 22.6 61 0.0013 29.5 2.0 17 54-70 254-270 (633)
155 PLN02802 triacylglycerol lipas 21.9 1.4E+02 0.0029 26.7 4.0 17 54-70 333-349 (509)
156 PLN02733 phosphatidylcholine-s 21.3 1.3E+02 0.0028 26.2 3.7 18 53-70 164-181 (440)
157 PLN00021 chlorophyllase 21.1 59 0.0013 26.7 1.6 18 54-71 129-146 (313)
158 PF12740 Chlorophyllase2: Chlo 21.0 1.3E+02 0.0027 24.4 3.4 45 24-72 64-112 (259)
159 KOG1068 Exosomal 3'-5' exoribo 21.0 1.1E+02 0.0025 24.4 3.0 44 6-61 117-163 (245)
160 PF11187 DUF2974: Protein of u 20.9 2E+02 0.0043 22.5 4.4 38 26-71 67-104 (224)
161 COG2945 Predicted hydrolase of 20.6 1.2E+02 0.0027 23.6 3.1 35 28-71 89-123 (210)
162 PF03283 PAE: Pectinacetyleste 20.6 72 0.0016 26.9 2.0 16 54-69 159-174 (361)
163 cd07484 Peptidases_S8_Thermita 20.4 83 0.0018 24.5 2.3 43 51-94 216-258 (260)
164 cd04077 Peptidases_S8_PCSK9_Pr 20.2 83 0.0018 24.5 2.2 43 50-92 211-253 (255)
165 KOG4409 Predicted hydrolase/ac 20.1 72 0.0016 27.1 1.8 19 53-71 162-180 (365)
No 1
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=100.00 E-value=3.5e-35 Score=243.79 Aligned_cols=157 Identities=72% Similarity=1.105 Sum_probs=137.6
Q ss_pred CCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHH
Q 030813 9 GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFY 88 (171)
Q Consensus 9 ~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~ 88 (171)
.+++|||||||||+||++++++|++||++++++.|.+.++.+.||+|+|||+|||+|++|+.+...++|.++++|+.++|
T Consensus 1 ~~~~rILslDGGGiRGi~~a~iL~~lE~~l~~~~g~~~~i~~~FDliaGTStGgiiA~~la~~~~~~~p~~~~~e~~~~y 80 (349)
T cd07214 1 GKFITVLSIDGGGIRGIIPATILEFLEGKLQELDGPDARIADYFDVIAGTSTGGLITAMLTAPNENKRPLFAAKDIVQFY 80 (349)
T ss_pred CCceEEEEECCCchhhHHHHHHHHHHHHHHHHhcCCCCCHhHhCCEEeeCCHHHHHHHHHhcCCCCCCCccCHHHHHHHH
Confidence 36789999999999999999999999999987777667899999999999999999999999877789999999999999
Q ss_pred HhhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813 89 LEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF 168 (171)
Q Consensus 89 ~~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~ 168 (171)
.+.+.++|.+.... + ..+ ..+++.+..++|+++.|+++|+++|++.+|.|+.++++|+|+|+.+++|++|+||+...
T Consensus 81 ~~~~~~iF~~~~~~-~-~~~-~~~~~~~~~~~y~~~~L~~~L~~~~gd~~l~d~~~~v~I~a~dl~~~~p~~F~~~~~~~ 157 (349)
T cd07214 81 LENGPKIFPQSTGQ-F-EDD-RKKLRSLLGPKYDGVYLHDLLNELLGDTRLSDTLTNVVIPTFDIKLLQPVIFSSSKAKN 157 (349)
T ss_pred HHhhHHhcCCCccc-c-hhH-HHHHHHhccCccCcHHHHHHHHHHhccccHhhhCCceEEEeEECCCCCeEEEeCccccC
Confidence 99999999776421 1 011 22344456789999999999999999999999999999999999999999999997653
No 2
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=1.3e-32 Score=226.83 Aligned_cols=149 Identities=45% Similarity=0.720 Sum_probs=129.7
Q ss_pred EEEEEeCCChhhHHHHHHHHHHHHHhhhcCCC-CCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhh
Q 030813 13 TVLSIDGGGIRGIIPGTILAFLESKLQELDGP-SARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEH 91 (171)
Q Consensus 13 ~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~-~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~ 91 (171)
|||||||||+||++++.+|++||++++++.|. ++++++.||+|+|||+|||+|++++.+...++|.++++|+.++|.+.
T Consensus 1 rILslDGGGirG~~~~~iL~~le~~l~~~~g~~~~~i~~~fDli~GTStGgiia~~l~~~~~~g~~~~s~~e~~~~y~~~ 80 (329)
T cd07215 1 RILSIDGGGIRGIIPATILVSVEEKLQKKTGNPEARLADYFDLVAGTSTGGILTCLYLCPNESGRPKFSAKEALNFYLER 80 (329)
T ss_pred CEEEEcCChHHHHHHHHHHHHHHHHHhhhcCCCCCcHhhccCeeeccCHHHHHHHHHhCCCCCCCCCcCHHHHHHHHHHh
Confidence 69999999999999999999999998766554 36789999999999999999999987766688899999999999999
Q ss_pred CCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCcc
Q 030813 92 GPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC 167 (171)
Q Consensus 92 ~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~ 167 (171)
+.++|..... ..+ .....+..++|++++|+++|+++|++.+|.|+.++++|+|+|+.++++++|+++...
T Consensus 81 ~~~IF~~~~~----~~~--~~~~~~~~~~y~~~~L~~~L~~~fg~~~l~d~~~~~~i~a~d~~~~~~~~f~~~~~~ 150 (329)
T cd07215 81 GNYIFKKKIW----NKI--KSRGGFLNEKYSHKPLEEVLLEYFGDTKLSELLKPCLITSYDIERRSPHFFKSHTAI 150 (329)
T ss_pred hHhhcccchh----hhh--hhhccccccccCcHHHHHHHHHHhCCCchhhhcCCceEEeeecCCCCceEecCcccC
Confidence 9999987542 111 112345678999999999999999999999999999999999999999999998753
No 3
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=99.97 E-value=6.7e-30 Score=208.95 Aligned_cols=146 Identities=25% Similarity=0.427 Sum_probs=119.1
Q ss_pred CCCCCCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHH
Q 030813 5 GSAEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDI 84 (171)
Q Consensus 5 ~~~~~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~ 84 (171)
+|+.++++|+|||||||+||++++++|++||++++ .++++.||+|+|||+|||+|++|+.+. ++++||
T Consensus 1 ~~~~~~~~riLsLdGGGirG~~~~~vL~~Le~~~~------~~i~~~fDli~GTStGgiiA~~la~~~------~~~~e~ 68 (308)
T cd07211 1 PPVKGRGIRILSIDGGGTRGVVALEILRKIEKLTG------KPIHELFDYICGVSTGAILAFLLGLKK------MSLDEC 68 (308)
T ss_pred CCCCCCCcEEEEECCChHHHHHHHHHHHHHHHHhC------CCchhhcCEEEecChhHHHHHHHhccc------ccHHHH
Confidence 58899999999999999999999999999999864 378899999999999999999999753 789999
Q ss_pred HHHHHhhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccC----C-ceEEEeeeC--CCCC
Q 030813 85 NNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETL----T-NVVIPTFDI--KLLQ 157 (171)
Q Consensus 85 ~~~~~~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~----~-~~~i~a~di--~~~~ 157 (171)
.++|.++..++|..... . . ......+..++|++++|+++|+++|++.++.|.. + +++|+++++ .+.+
T Consensus 69 ~~~y~~~~~~iF~~~~~--~-~---~~~~~~~~~~~y~~~~l~~~l~~~~g~~~l~~~~~~~~~p~~~v~st~~~~~~~~ 142 (308)
T cd07211 69 EELYRKLGKDVFSQNTY--I-S---GTSRLVLSHAYYDTETWEKILKEMMGSDELIDTSADPNCPKVACVSTQVNRTPLK 142 (308)
T ss_pred HHHHHHHHHHhcCCCcc--c-c---chhhhhccCCccChHHHHHHHHHHhCCccccccccCCCCCEEEEEEEeccCCCCc
Confidence 99999999999977541 1 0 0001123468999999999999999998887753 2 355666644 5678
Q ss_pred eEEeeCCCccc
Q 030813 158 PVIFSTTDVCF 168 (171)
Q Consensus 158 ~~~f~~~~~~~ 168 (171)
+++|+||+...
T Consensus 143 p~~f~ny~~~~ 153 (308)
T cd07211 143 PYVFRNYNHPP 153 (308)
T ss_pred eEEEeCCCCCC
Confidence 99999998653
No 4
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=99.96 E-value=2.2e-29 Score=208.51 Aligned_cols=140 Identities=27% Similarity=0.418 Sum_probs=116.6
Q ss_pred eEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCC-CCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813 12 ITVLSIDGGGIRGIIPGTILAFLESKLQELDGP-SARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE 90 (171)
Q Consensus 12 ~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~-~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (171)
.|||||||||+||++++++|++||+++++..+. +.++++.||+|+|||+|||+|++++.+ ++++|+.++|.+
T Consensus 1 ~rILsLDGGGiRGi~~~gvL~~LE~~l~~~~~~p~~~l~d~FDlIaGTStGgIIAa~la~g-------~s~~ei~~~y~~ 73 (344)
T cd07217 1 KKILALDGGGIRGLLSVEILGRIEKDLRTHLDDPEFRLGDYFDFVGGTSTGSIIAACIALG-------MSVTDLLSFYTL 73 (344)
T ss_pred CEEEEEcCCHHHHHHHHHHHHHHHHHhhhccCCccccccccccEEEEecHHHHHHHHHHcC-------CCHHHHHHHHHh
Confidence 479999999999999999999999998654433 357889999999999999999999976 689999999999
Q ss_pred hCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCcccc--CCceEEEeeeCCCCCeEEeeCCC
Q 030813 91 HGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKET--LTNVVIPTFDIKLLQPVIFSTTD 165 (171)
Q Consensus 91 ~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~--~~~~~i~a~di~~~~~~~f~~~~ 165 (171)
...++|..... . ..+......+.|+.++|+++|+++|++.+|.|. .+++.|+|+|+.++++++|+|+.
T Consensus 74 ~~~~iF~~~~~--~-----~~l~~~~~~~~y~~~~L~~~L~~~fg~~~l~d~~~~~~l~i~a~dl~tg~p~~f~~~~ 143 (344)
T cd07217 74 NGVNMFDKAWL--A-----QRLFLNKLYNQYDPTNLGKKLNTVFPETTLGDDTLRTLLMIVTRNATTGSPWPVCNNP 143 (344)
T ss_pred hhhhhcCchhh--h-----hhccccccccccCcHHHHHHHHHHcCceeecccccCceEEEEEEecCCCCeeEeecCc
Confidence 99999987531 1 011111112459999999999999999999984 46899999999999999999864
No 5
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=99.96 E-value=7.1e-29 Score=203.08 Aligned_cols=143 Identities=27% Similarity=0.413 Sum_probs=116.9
Q ss_pred eEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCC--CCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813 12 ITVLSIDGGGIRGIIPGTILAFLESKLQELDGP--SARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL 89 (171)
Q Consensus 12 ~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~--~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~ 89 (171)
+|||||||||+||++++++|++||++++++.|. .+++++.||+|+|||+|||+|++|+.. +++++||.++|.
T Consensus 1 ~rILslDGGGiRGl~~~~iL~~le~~l~~~~~~~~~~~~~~~fDli~GTStGgiiA~~l~~~------~~t~~e~~~~y~ 74 (309)
T cd07216 1 LNLLSLDGGGVRGLSSLLILKEIMERIDPKEGLDEPPKPCDYFDLIGGTSTGGLIAIMLGRL------RMTVDECIDAYT 74 (309)
T ss_pred CcEEEEcCCchhHHHHHHHHHHHHHHhhhccccCCCCChhHhcCeeeeccHHHHHHHHhccc------CCCHHHHHHHHH
Confidence 489999999999999999999999998653332 357789999999999999999999842 379999999999
Q ss_pred hhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCcc---------ccCCceEEEeeeCC-CCCeE
Q 030813 90 EHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVK---------ETLTNVVIPTFDIK-LLQPV 159 (171)
Q Consensus 90 ~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~---------d~~~~~~i~a~di~-~~~~~ 159 (171)
++..++|........ ......++.|+.+.+++++++++++..+. +..++++|+++|++ +++++
T Consensus 75 ~~~~~iF~~~~~~~~-------~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~~~~ 147 (309)
T cd07216 75 RLAKKIFSRKRLRLI-------IGDLRTGARFDSKKLAEAIKVILKELGNDEDDLLDEGEEDGCKVFVCATDKDVTGKAV 147 (309)
T ss_pred HHhHHhCCCCCcccc-------ccccccCCCCChHHHHHHHHHHHHhcCCCchhhhccccccCCCEEEEEEeeCCCCceE
Confidence 999999987642111 01123457899999999999999865543 24568999999998 99999
Q ss_pred EeeCCCcc
Q 030813 160 IFSTTDVC 167 (171)
Q Consensus 160 ~f~~~~~~ 167 (171)
+|+||+..
T Consensus 148 ~f~~y~~~ 155 (309)
T cd07216 148 RLRSYPSK 155 (309)
T ss_pred EEecCCCC
Confidence 99999864
No 6
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=99.96 E-value=2.9e-28 Score=199.66 Aligned_cols=123 Identities=26% Similarity=0.403 Sum_probs=106.5
Q ss_pred EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813 14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP 93 (171)
Q Consensus 14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (171)
||||||||+||++|+++|++||++++ .++++.||+|+|||+|||+|++++.+ ++++||.++|.++.+
T Consensus 1 ILsLDGGG~RGl~~i~vL~~le~~~g------~~i~~~fD~i~GTStGgiIA~~la~g-------~s~~e~~~~y~~~~~ 67 (312)
T cd07212 1 LLCLDGGGIRGLVLIQMLIAIEKALG------RPIRELFDWIAGTSTGGILALALLHG-------KSLREARRLYLRMKD 67 (312)
T ss_pred CEEECCcHHHHHHHHHHHHHHHHHhC------CCchhhccEEEeeChHHHHHHHHHcC-------CCHHHHHHHHHHhhh
Confidence 69999999999999999999999854 47889999999999999999999986 689999999999988
Q ss_pred cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCC-CccccCCceEEEeeeCCCC---CeEEeeCCCccc
Q 030813 94 KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDV-TVKETLTNVVIPTFDIKLL---QPVIFSTTDVCF 168 (171)
Q Consensus 94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~-~l~d~~~~~~i~a~di~~~---~~~~f~~~~~~~ 168 (171)
++|... +.|++++|+++|+++||+. ++.|...+.++++++..++ ++++|+||+.+.
T Consensus 68 ~iF~~~-------------------~~y~~~~le~~L~~~~g~~~~l~d~~~p~~~v~~~~~~~~~~~~~~f~ny~~~~ 127 (312)
T cd07212 68 RVFDGS-------------------RPYNSEPLEEFLKREFGEDTKMTDVKYPRLMVTGVLADRQPVQLHLFRNYDPPE 127 (312)
T ss_pred hhCCCC-------------------CCCCChHHHHHHHHHHCcCccccccCCCeEEEEeEeccCCCcCceeeecCCCCC
Confidence 887542 4589999999999999997 7999988766666666544 559999998653
No 7
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=99.95 E-value=1.4e-27 Score=193.79 Aligned_cols=131 Identities=28% Similarity=0.508 Sum_probs=112.1
Q ss_pred ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813 11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE 90 (171)
Q Consensus 11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (171)
++|||||||||+||++++++|++||++.+ ++.+.||+|+|||+|||+|++++.+ ++++|+.++|.+
T Consensus 1 ~~riLsLdGGG~RGi~~~~vL~~Le~~~~-------~~~~~fD~i~GTSaGaiia~~la~g-------~~~~e~~~~~~~ 66 (288)
T cd07213 1 KYRILSLDGGGVKGIVQLVLLKRLAEEFP-------SFLDQIDLFAGTSAGSLIALGLALG-------YSPRQVLKLYEE 66 (288)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHHHHhCc-------ccccceeEEEEeCHHHHHHHHHHcC-------cCHHHHHHHHHH
Confidence 57999999999999999999999999832 5678999999999999999999987 489999999999
Q ss_pred hCCcccCCCcccchhhHHHhhhhhhccCCCCChH-HHHHHHHHHhCCCCccccCCceEEEeeeCCCCC--------eEEe
Q 030813 91 HGPKIFPQISRSNFSESIASSIDKRLLGPKYDGK-YLRALVNELLGDVTVKETLTNVVIPTFDIKLLQ--------PVIF 161 (171)
Q Consensus 91 ~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~-~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~--------~~~f 161 (171)
...++|...... ..+....|..+ .++++++++|++.+|.|+.++++|+|+|+++++ +++|
T Consensus 67 ~~~~iF~~~~~~-----------~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~~~~~~~~~~~~~~~~~~f 135 (288)
T cd07213 67 VGLKVFSKSSAG-----------GGAGNNQYFAAGFLKAFAEVFFGDLTLGDLKRKVLVPSFQLDSGKDDPNRRWKPKLF 135 (288)
T ss_pred hCccccCCCccc-----------cccccccCCchHHHHHHHHHHhCcCCHhhcCCCEEEEEEeccCCCCCccccccceEe
Confidence 999999775421 01123445444 899999999999999999999999999999986 6999
Q ss_pred eCCCc
Q 030813 162 STTDV 166 (171)
Q Consensus 162 ~~~~~ 166 (171)
+|++.
T Consensus 136 ~n~~~ 140 (288)
T cd07213 136 HNFPG 140 (288)
T ss_pred ecCCC
Confidence 99864
No 8
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=99.93 E-value=8.8e-27 Score=195.99 Aligned_cols=147 Identities=24% Similarity=0.394 Sum_probs=121.4
Q ss_pred CCCCCCCCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHH
Q 030813 3 TAGSAEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAK 82 (171)
Q Consensus 3 ~~~~~~~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~ 82 (171)
...|+.++++|||++||||+||++.+.+|+.+|+..+ .|+++.||+|||+|+|||+|++|.... |+.+
T Consensus 408 ~~~~vkg~G~rILSiDGGGtrG~~~lqiL~kieklsg------KpIheLFD~ICGvSTG~ilA~~Lg~k~------m~l~ 475 (763)
T KOG4231|consen 408 KGRQVKGQGLRILSIDGGGTRGLATLQILKKIEKLSG------KPIHELFDLICGVSTGGILAIALGVKL------MTLE 475 (763)
T ss_pred cccccCCCceEEEEecCCCccchhHHHHHHHHHHhcC------CcHHHHHHHHhccCchHHHHHHHHhcC------ccHH
Confidence 4578899999999999999999999999999999643 489999999999999999999999765 8999
Q ss_pred HHHHHHHhhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCC-ccccC-----CceEEEeeeCC--
Q 030813 83 DINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVT-VKETL-----TNVVIPTFDIK-- 154 (171)
Q Consensus 83 ~~~~~~~~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~-l~d~~-----~~~~i~a~di~-- 154 (171)
||.++|.++++.+|+++.. - .+....|.+++|++..++++|++.+|++- |-... .+++++++=++
T Consensus 476 eCeEiY~~lgk~vFsq~v~--~-----g~~~~sw~Hs~y~~n~we~iLKem~ged~~mi~tsr~~~~PkvavVStiVn~~ 548 (763)
T KOG4231|consen 476 ECEEIYKNLGKLVFSQSVP--K-----GNEAASWIHSKYSANEWERILKEMCGEDGDMIITSRVKNVPKVAVVSTIVNVM 548 (763)
T ss_pred HHHHHHHHHhHHHhhcccc--c-----cchhheehhhhcchHHHHHHHHHHhhhhhhHHHhhccCCCCceeehhhhhhcC
Confidence 9999999999999998752 1 22223556799999999999999999753 43321 25777666444
Q ss_pred -CCCeEEeeCCCccc
Q 030813 155 -LLQPVIFSTTDVCF 168 (171)
Q Consensus 155 -~~~~~~f~~~~~~~ 168 (171)
|.||++|+||+...
T Consensus 549 pT~qpfIFRNY~hp~ 563 (763)
T KOG4231|consen 549 PTAQPFIFRNYQHPV 563 (763)
T ss_pred CCccceeeeccCCCC
Confidence 68999999999764
No 9
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=99.92 E-value=2.9e-24 Score=162.27 Aligned_cols=122 Identities=22% Similarity=0.301 Sum_probs=101.9
Q ss_pred EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813 14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP 93 (171)
Q Consensus 14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (171)
.|+|+|||+||++|+|+|++|+|+ . ..||+|+|||+||++|++++.+ ++++++.+.|.+...
T Consensus 2 ~Lvl~GGG~rG~~~~Gvl~~L~~~---------~--~~~d~i~GtSaGal~a~~~a~g-------~~~~~~~~~~~~~~~ 63 (175)
T cd07205 2 GLALSGGGARGLAHIGVLKALEEA---------G--IPIDIVSGTSAGAIVGALYAAG-------YSPEEIEERAKLRST 63 (175)
T ss_pred eEEEeChhHHHHHHHHHHHHHHHc---------C--CCeeEEEEECHHHHHHHHHHcC-------CCHHHHHHHHHhhcc
Confidence 699999999999999999999986 1 2599999999999999999987 478999998876544
Q ss_pred cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCC
Q 030813 94 KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD 165 (171)
Q Consensus 94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~ 165 (171)
..+.... . .....+.|+.+.+++.+++.++..+++++.+++.|+|+|++++++++|++.+
T Consensus 64 ~~~~~~~--~----------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~i~a~~l~~g~~~~f~~~~ 123 (175)
T cd07205 64 DLKALSD--L----------TIPTAGLLRGDKFLELLDEYFGDRDIEDLWIPFFIVATDLTSGKLVVFRSGS 123 (175)
T ss_pred chhhhhc--c----------ccccccccChHHHHHHHHHHcCCCcHHHCCCCEEEEEEECCCCCEEEEcCCC
Confidence 4332211 0 0113467999999999999999999999999999999999999999998754
No 10
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=99.91 E-value=5.2e-24 Score=162.95 Aligned_cols=129 Identities=26% Similarity=0.305 Sum_probs=101.4
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCCc
Q 030813 15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPK 94 (171)
Q Consensus 15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (171)
|+|+|||+||++|+|+|++|+|+ | ..||+|+|||+||++|++++.+ ++.+++.++|.....+
T Consensus 2 Lvl~GGG~rG~~~~Gvl~~L~e~-----~------~~~d~i~GtSaGai~aa~~a~g-------~~~~~~~~~~~~~~~~ 63 (194)
T cd07207 2 LVFEGGGAKGIAYIGALKALEEA-----G------ILKKRVAGTSAGAITAALLALG-------YSAADIKDILKETDFA 63 (194)
T ss_pred eEEcCchHHHHHHHHHHHHHHHc-----C------CCcceEEEECHHHHHHHHHHcC-------CCHHHHHHHHHhCCHH
Confidence 89999999999999999999996 1 2479999999999999999987 4789999999887655
Q ss_pred ccCCCcccchhhHHHhhhhhhc-cCCCCChHHHHHHHHHHhCCCCc------------cccCCceEEEeeeCCCCCeEEe
Q 030813 95 IFPQISRSNFSESIASSIDKRL-LGPKYDGKYLRALVNELLGDVTV------------KETLTNVVIPTFDIKLLQPVIF 161 (171)
Q Consensus 95 if~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~~l~~~~~~~~l------------~d~~~~~~i~a~di~~~~~~~f 161 (171)
.|.......+ ..+.+.+ ..+.|+.+.+++.|++.++...+ .+..+++.|+|||+.++++++|
T Consensus 64 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~I~atd~~tg~~~~f 138 (194)
T cd07207 64 KLLDSPVGLL-----FLLPSLFKEGGLYKGDALEEWLRELLKEKTGNSFATSLLRDLDDDLGKDLKVVATDLTTGALVVF 138 (194)
T ss_pred HHhccchhhh-----HHHHHHHhhcCCccHHHHHHHHHHHHHhccCCcccchhhhhhccccCCcEEEEEEECCCCCEEEe
Confidence 4433211011 1111111 35689999999999999977655 5678899999999999999999
Q ss_pred eCCCc
Q 030813 162 STTDV 166 (171)
Q Consensus 162 ~~~~~ 166 (171)
++...
T Consensus 139 ~~~~~ 143 (194)
T cd07207 139 SAETT 143 (194)
T ss_pred cCCCC
Confidence 87543
No 11
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=99.90 E-value=1.5e-23 Score=158.60 Aligned_cols=121 Identities=21% Similarity=0.258 Sum_probs=94.3
Q ss_pred EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhC-
Q 030813 14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHG- 92 (171)
Q Consensus 14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~- 92 (171)
.|+|+|||+||++|+|+|++|+|+ | ..||+|+|||+|||+|++++.+. +.+++..+ .+..
T Consensus 2 ~LvL~GGG~rG~~~~Gvl~~L~e~-----g------~~~d~i~GtSaGAi~aa~~a~g~-------~~~~~~~~-~~~~~ 62 (175)
T cd07228 2 GLALGSGGARGWAHIGVLRALEEE-----G------IEIDIIAGSSIGALVGALYAAGH-------LDALEEWV-RSLSQ 62 (175)
T ss_pred EEEecCcHHHHHHHHHHHHHHHHC-----C------CCeeEEEEeCHHHHHHHHHHcCC-------CHHHHHHH-HhhhH
Confidence 699999999999999999999986 2 25999999999999999999884 44554332 2111
Q ss_pred CcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCC
Q 030813 93 PKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD 165 (171)
Q Consensus 93 ~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~ 165 (171)
.+.+. .+ . ......+.++.+++++.|++.+++.+++++.+++.|+|||++++++++|++.+
T Consensus 63 ~~~~~-----~~------~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~i~at~~~tg~~~~f~~~~ 123 (175)
T cd07228 63 RDVLR-----LL------D-LSASRSGLLKGEKVLEYLREIMGGVTIEELPIPFAAVATDLQTGKEVWFREGS 123 (175)
T ss_pred HHHHh-----hc------c-cCCCcccccCHHHHHHHHHHHcCCCCHHHCCCCEEEEEEECCCCCEEEECCCC
Confidence 11110 00 0 00113467899999999999999999999999999999999999999998754
No 12
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=99.90 E-value=2.7e-23 Score=162.85 Aligned_cols=122 Identities=23% Similarity=0.264 Sum_probs=101.3
Q ss_pred EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813 14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP 93 (171)
Q Consensus 14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (171)
.|+|+|||+||++|+|||++|+|+ | ..+|.|+|||+|||+|++++.+ ++.+|+.+.|.+...
T Consensus 2 ~LvL~GGG~rG~~~~GvL~aL~e~-----g------i~~~~i~GtSaGAi~aa~~a~g-------~~~~~~~~~~~~~~~ 63 (221)
T cd07210 2 ALVLSSGFFGFYAHLGFLAALLEM-----G------LEPSAISGTSAGALVGGLFASG-------ISPDEMAELLLSLER 63 (221)
T ss_pred eEEEcChHHHHHHHHHHHHHHHHc-----C------CCceEEEEeCHHHHHHHHHHcC-------CCHHHHHHHHHhcCH
Confidence 699999999999999999999996 2 2589999999999999999987 478999888876542
Q ss_pred cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCC
Q 030813 94 KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD 165 (171)
Q Consensus 94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~ 165 (171)
+.|-.. . ......+.|+.+.+++.+++.++..++.++.+++.|+|||+.++++++|++++
T Consensus 64 ~~~~~~----~--------~~~~~~g~~~~~~l~~~l~~~l~~~~~~~~~~~l~i~atdl~tg~~~~f~~~~ 123 (221)
T cd07210 64 KDFWMF----W--------DPPLRGGLLSGDRFAALLREHLPPDRFEELRIPLAVSVVDLTSRETLLLSEGD 123 (221)
T ss_pred HHHhhh----c--------cccCCccccChHHHHHHHHHHcCCCCHHHCCCCeEEEEEECCCCCEEEECCCC
Confidence 211000 0 01123568999999999999999999999999999999999999999998865
No 13
>COG3621 Patatin [General function prediction only]
Probab=99.89 E-value=5.4e-23 Score=165.52 Aligned_cols=140 Identities=29% Similarity=0.564 Sum_probs=113.2
Q ss_pred CceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813 10 KKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL 89 (171)
Q Consensus 10 ~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~ 89 (171)
.++|+|+|||||+||..++.+++.+||.. | .++++.||+++|||+|||+++.|+.+. +++|..++|.
T Consensus 7 sk~rIlsldGGGvrG~i~lE~lr~ieqiq----G--kkl~e~FDl~~GTSiGgilal~La~~k-------s~~e~~qlF~ 73 (394)
T COG3621 7 SKYRILSLDGGGVRGAILLEKLRIIEQIQ----G--KKLCEYFDLIGGTSIGGILALGLALGK-------SPRELKQLFS 73 (394)
T ss_pred cceeEEEecCCccccHHHHHHHHHHHHHh----C--CcceeeEeeecCccHHHHHHHHHhcCC-------CCchHHHHHH
Confidence 36899999999999999999999999842 3 488999999999999999999999985 6788888888
Q ss_pred hhCCcccCCCcc-cchh-hHHHhhhhh-hccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCC-eEEeeC
Q 030813 90 EHGPKIFPQISR-SNFS-ESIASSIDK-RLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQ-PVIFST 163 (171)
Q Consensus 90 ~~~~~if~~~~~-~~~~-~~~~~~~~~-~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~-~~~f~~ 163 (171)
+...++|..... ..+. ..+ ...+. .++.++|++++|.++|+.++++.++.|+.++++|+.+|+.+.| +.+|.+
T Consensus 74 ~q~~q~f~ee~~~~~fpv~tF-rq~l~~a~~~pkys~~pLiK~lk~~~~D~tlkDL~~~Vvv~~~~l~~~knp~~t~~ 150 (394)
T COG3621 74 AQQAQIFPEEMKHRIFPVGTF-RQLLSYALFSPKYSPQPLIKLLKFVCKDYTLKDLIGRVVVPGYDLNNQKNPLFTFS 150 (394)
T ss_pred HhhhhhccHhhccCCCcchhH-hhhhhhhhcCCcCCchhHHHHHHHhccccchhhhccceEEEeeecccccCCceeec
Confidence 877777766532 1110 001 11111 2578999999999999999999999999999999999999988 666554
No 14
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=99.89 E-value=5.7e-23 Score=167.93 Aligned_cols=127 Identities=17% Similarity=0.236 Sum_probs=101.4
Q ss_pred ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813 11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE 90 (171)
Q Consensus 11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (171)
+...|+|+|||+||++|+|||++|||+ . ..||+|+|||+||++|++++.+ ++++++.+...+
T Consensus 14 ~~~gLvL~GGG~RG~ahiGvL~aLee~---------g--i~~d~v~GtSaGAi~ga~ya~g-------~~~~~~~~~~~~ 75 (306)
T cd07225 14 NSIALVLGGGGARGCAHIGVIKALEEA---------G--IPVDMVGGTSIGAFIGALYAEE-------RNISRMKQRARE 75 (306)
T ss_pred CCEEEEECChHHHHHHHHHHHHHHHHc---------C--CCCCEEEEECHHHHHHHHHHcC-------CCHHHHHHHHHH
Confidence 347899999999999999999999997 2 2599999999999999999988 367777665554
Q ss_pred hCCcccCCCcccchhhHHHhhhh--hhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCC
Q 030813 91 HGPKIFPQISRSNFSESIASSID--KRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD 165 (171)
Q Consensus 91 ~~~~if~~~~~~~~~~~~~~~~~--~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~ 165 (171)
.... ...++ ..++ .....+.|+.+.+++.|++.|++.+|+|+++|+.++|||+.+|++++|++.+
T Consensus 76 ~~~~-----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~edl~~p~~~vatdl~tg~~~~~~~g~ 142 (306)
T cd07225 76 WAKD-----MTSIW-----KKLLDLTYPITSMFSGAAFNRSIHSIFGDKQIEDLWLPYFTITTDITASAMRVHTDGS 142 (306)
T ss_pred HHHH-----hHHHH-----HHHhcccccccccCChHHHHHHHHHHhCCCCHHHcCCCeEEEeeecCCCCEEEecCCC
Confidence 3211 00011 1111 1234567999999999999999999999999999999999999999998764
No 15
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=99.88 E-value=1.4e-22 Score=161.95 Aligned_cols=97 Identities=47% Similarity=0.803 Sum_probs=84.4
Q ss_pred EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813 14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP 93 (171)
Q Consensus 14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (171)
+|||||||+||++++++|++||++++. +.++.+.||+|+|||+|||+|++++.+. ++++|+.++|.+...
T Consensus 1 iLsldGGG~rG~~~~~~L~~le~~~~~----~~~~~~~fd~i~GtS~G~iia~~l~~~~------~~~~~~~~~~~~~~~ 70 (258)
T cd07199 1 ILSLDGGGIRGIIPAEILAELEKRLGK----PSRIADLFDLIAGTSTGGIIALGLALGR------YSAEELVELYEELGR 70 (258)
T ss_pred CEEECCchHhHHHHHHHHHHHHHHhCC----CCchhhccceeeeccHHHHHHHHHhcCC------CCHHHHHHHHHHHhH
Confidence 699999999999999999999999752 1138899999999999999999999873 689999999988654
Q ss_pred cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCcc
Q 030813 94 KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC 167 (171)
Q Consensus 94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~ 167 (171)
++| . +++|+|+|++++++++|+||+..
T Consensus 71 ~if-------------------------~----------------------~~~i~a~~~~~~~~~~f~~~~~~ 97 (258)
T cd07199 71 KIF-------------------------P----------------------RVLVTAYDLSTGKPVVFSNYDAE 97 (258)
T ss_pred hhc-------------------------c----------------------CeEEEEEEcCCCCeEEEECCCCc
Confidence 322 1 89999999999999999999865
No 16
>PRK10279 hypothetical protein; Provisional
Probab=99.86 E-value=2.3e-21 Score=157.95 Aligned_cols=126 Identities=15% Similarity=0.171 Sum_probs=97.7
Q ss_pred CceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813 10 KKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL 89 (171)
Q Consensus 10 ~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~ 89 (171)
++...|+|+|||+||++|+|||++|+|+ . ..||+|+|||+||++|++++.+. ..++.+++.
T Consensus 3 ~~~igLvL~GGGarG~ahiGVL~aL~E~---------g--i~~d~i~GtS~GAlvga~yA~g~--------~~~l~~~~~ 63 (300)
T PRK10279 3 KIKIGLALGSGAARGWSHIGVINALKKV---------G--IEIDIVAGCSIGSLVGAAYACDR--------LSALEDWVT 63 (300)
T ss_pred CCcEEEEEcCcHHHHHHHHHHHHHHHHc---------C--CCcCEEEEEcHHHHHHHHHHcCC--------hHHHHHHHh
Confidence 3457899999999999999999999997 2 25899999999999999999874 345555443
Q ss_pred hhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCC
Q 030813 90 EHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD 165 (171)
Q Consensus 90 ~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~ 165 (171)
... |.. .+ .. .. +.....+.++.+++++.+++.++..+++++..++.|+|||+.++++++|++.+
T Consensus 64 ~~~---~~~----~~-~~--~d-~~~~~~gl~~~~~~~~~l~~~~~~~~~e~l~~~~~ivAtdl~tg~~v~~~~g~ 128 (300)
T PRK10279 64 SFS---YWD----VL-RL--MD-LSWQRGGLLRGERVFNQYREIMPETEIENCSRRFGAVATNLSTGRELWFTEGD 128 (300)
T ss_pred ccc---hhh----hh-hh--hc-cCCCcCcccCcHHHHHHHHHHcChhhHHhCCCCEEEEEEECCCCCEEEecCCC
Confidence 321 000 00 00 00 01112467899999999999999999999999999999999999999998754
No 17
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=99.86 E-value=3.1e-21 Score=155.00 Aligned_cols=129 Identities=19% Similarity=0.200 Sum_probs=95.0
Q ss_pred ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813 11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE 90 (171)
Q Consensus 11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (171)
+...|+|+|||+||++|+|||++|||+ | ..||+|+|||+||++|++++.+ +++.++.+...+
T Consensus 9 ~~igLVL~GGGaRG~ahiGVL~aLeE~-----g------i~~d~v~GtSaGAiiga~ya~g-------~~~~~~~~r~~~ 70 (269)
T cd07227 9 QAIGLVLGGGGARGISHIGILQALEEA-----G------IPIDAIGGTSIGSFVGGLYARE-------ADLVPIFGRAKK 70 (269)
T ss_pred CCEEEEECCcHHHHHHHHHHHHHHHHc-----C------CCccEEEEECHHHHHHHHHHcC-------CchHHHHHHHHH
Confidence 347899999999999999999999997 2 2599999999999999999987 356665543322
Q ss_pred hCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCC
Q 030813 91 HGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTD 165 (171)
Q Consensus 91 ~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~ 165 (171)
...+.++ ++ +.+ .. ......+.++.+.+.+.|.+.|++.+++|+..|+.+++||+.++++++|++.+
T Consensus 71 ~~~~~~~-----~~-~~l-~d-~~~p~~~~~~g~~~~~~l~~~~~~~~iedl~~pf~~~aTdl~tg~~~~~~~g~ 137 (269)
T cd07227 71 FAGRMAS-----MW-RFL-SD-VTYPFASYTTGHEFNRGIWKTFGNTHIEDFWIPFYANSTNITHSRMEIHSSGY 137 (269)
T ss_pred HHHHHhH-----HH-HHH-hh-cccccccccchhHHHHHHHHHcCcCCHHHCCCCEEEEEEECCCCCEEEecCCC
Confidence 2111110 11 000 00 01112234566777788899999999999999999999999999999998765
No 18
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=99.82 E-value=5.9e-20 Score=143.31 Aligned_cols=107 Identities=24% Similarity=0.387 Sum_probs=87.2
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCCc
Q 030813 15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPK 94 (171)
Q Consensus 15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (171)
|+|+|||+||+||+|+|++|+|+ | ..||+|+|||+||++|++++.+... ..+++.++|.++...
T Consensus 1 LvL~GGG~rG~~~~Gvl~aL~e~-----g------~~~d~i~GtS~GAl~aa~~a~~~~~-----~~~~l~~~~~~~~~~ 64 (215)
T cd07209 1 LVLSGGGALGAYQAGVLKALAEA-----G------IEPDIISGTSIGAINGALIAGGDPE-----AVERLEKLWRELSRE 64 (215)
T ss_pred CEecccHHHHHHHHHHHHHHHHc-----C------CCCCEEEEECHHHHHHHHHHcCCcH-----HHHHHHHHHHhCChh
Confidence 78999999999999999999997 2 2699999999999999999998410 278888888865321
Q ss_pred ccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCC---ceEEEeeeCCCCCeEEeeCCC
Q 030813 95 IFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLT---NVVIPTFDIKLLQPVIFSTTD 165 (171)
Q Consensus 95 if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~---~~~i~a~di~~~~~~~f~~~~ 165 (171)
.++ +++++++.++..++.+... ++.|++||+.++++++|++.+
T Consensus 65 ----------------~~~------------l~~~~~~~~~~~~~~~~~~~~~~l~i~at~~~tg~~~~f~~~~ 110 (215)
T cd07209 65 ----------------DVF------------LRGLLDRALDFDTLRLLAILFAGLVIVAVNVLTGEPVYFDDIP 110 (215)
T ss_pred ----------------hHH------------HHHHHHHhCCHHHHhhccccCceEEEEEEEcCCCCEEEEeCCC
Confidence 000 6677777777777777765 599999999999999999876
No 19
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=99.82 E-value=1.1e-19 Score=144.40 Aligned_cols=125 Identities=17% Similarity=0.164 Sum_probs=98.5
Q ss_pred EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813 14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP 93 (171)
Q Consensus 14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (171)
.|||+|||+||+||+||+++|+|+ .+...+|.|+|||+||++|++++.+. +++++.+.+.++..
T Consensus 2 ~LsfsGGG~rG~yh~GVl~aL~e~---------g~~~~~d~i~GtSAGAl~aa~~a~g~-------~~~~~~~~~~~~~~ 65 (245)
T cd07218 2 NLSFAGCGFLGIYHVGVAVCLKKY---------APHLLLNKISGASAGALAACCLLCDL-------PLGEMTSDFLRVVR 65 (245)
T ss_pred cEEEeCcHHHHHHHHHHHHHHHHh---------CcccCCCeEEEEcHHHHHHHHHHhCC-------cHHHHHHHHHHHHH
Confidence 599999999999999999999997 22235799999999999999999984 56777766655543
Q ss_pred cccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813 94 KIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF 168 (171)
Q Consensus 94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~ 168 (171)
+..... + .. +.+.|+ .+.+++.+++.+++....+...++.|++|++.+++.++|++++.+.
T Consensus 66 ~~~~~~----l---------g~-~~p~~~l~~~l~~~l~~~lp~d~~~~~~~~L~i~~T~l~~g~~~~~s~f~s~~ 127 (245)
T cd07218 66 EARRHS----L---------GP-FSPSFNIQTCLLEGLQKFLPDDAHERVSGRLHISLTRVSDGKNVIVSEFESRE 127 (245)
T ss_pred HHHHhc----c---------cC-CccccCHHHHHHHHHHHHCCcchHHhCCCCEEEEEEECCCCCeEEEecCCCcc
Confidence 321111 1 11 124555 6788899999999988888899999999999999999999887654
No 20
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=99.82 E-value=3.4e-20 Score=148.70 Aligned_cols=122 Identities=19% Similarity=0.280 Sum_probs=90.1
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhC-C
Q 030813 15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHG-P 93 (171)
Q Consensus 15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~-~ 93 (171)
|+|+|||+||++|+|||++|+|+ .+. .||+|+|||+||++|++++.+. +.+ ..+.|.+.. +
T Consensus 1 Lvl~GGG~rG~~~~Gvl~al~e~---------~~~-~fd~i~GtSaGAi~a~~~~~g~-------~~~-~~~~~~~~~~~ 62 (266)
T cd07208 1 LVLEGGGMRGAYTAGVLDAFLEA---------GIR-PFDLVIGVSAGALNAASYLSGQ-------RGR-ALRINTKYATD 62 (266)
T ss_pred CeeccchhhHHHHHHHHHHHHHc---------CCC-CCCEEEEECHHHHhHHHHHhCC-------cch-HHHHHHHhcCC
Confidence 79999999999999999999997 221 5999999999999999999885 222 234444332 1
Q ss_pred cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHH---HHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCc
Q 030813 94 KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALV---NELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDV 166 (171)
Q Consensus 94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l---~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~ 166 (171)
..|.. + .++++ .++.|+.+.+.+.+ ...|+..++.++..++.|+|||++++++++|++.+.
T Consensus 63 ~~~~~-----~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~at~~~~g~~~~~~~~~~ 126 (266)
T cd07208 63 PRYLG-----L-----RSLLR--TGNLFDLDFLYDELPDGLDPFDFEAFAASPARFYVVATDADTGEAVYFDKPDI 126 (266)
T ss_pred CCccC-----H-----HHHhc--CCCeecHHHHHhhccCccCCcCHHHHHhCCCcEEEEEEECCCCCEEEEeCcCc
Confidence 11110 1 11111 24567888887766 455667788899999999999999999999998774
No 21
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=99.81 E-value=2.3e-19 Score=142.45 Aligned_cols=126 Identities=21% Similarity=0.229 Sum_probs=95.7
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCCc
Q 030813 15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPK 94 (171)
Q Consensus 15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (171)
|||+|||+||+||+||+++|+|+ | +.+...+|.|+|||+||++|++++.+. +++++.+.+.+...+
T Consensus 2 LslsGGG~~G~yh~GVl~~L~e~-----g--~~l~~~~~~i~GtSAGAl~aa~~a~g~-------~~~~~~~~~~~~~~~ 67 (243)
T cd07204 2 LSFSGCGFLGIYHVGVASALREH-----A--PRLLQNARRIAGASAGAIVAAVVLCGV-------SMEEACSFILKVVSE 67 (243)
T ss_pred eeEcchHHHHHHHHHHHHHHHHc-----C--cccccCCCEEEEEcHHHHHHHHHHhCC-------CHHHHHHHHHHHHhh
Confidence 89999999999999999999997 2 222233679999999999999999984 678877666655433
Q ss_pred ccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813 95 IFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF 168 (171)
Q Consensus 95 if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~ 168 (171)
...... +. ..+.|+ .+.+++.+++.+++.....+..++.|++||+.++++++|++++.+.
T Consensus 68 ~~~~~~-g~-------------~~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~~T~l~~g~~~~~~~f~s~~ 128 (243)
T cd07204 68 ARRRSL-GP-------------LHPSFNLLKILRQGLEKILPDDAHELASGRLHISLTRVSDGENVLVSEFDSKE 128 (243)
T ss_pred hhhhhc-Cc-------------ccccchHHHHHHHHHHHHCChhHHHhcCCCEEEEEEECCCCCEEEEecCCCch
Confidence 211110 00 112333 3568888999999888888889999999999999999999877654
No 22
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=99.81 E-value=1.2e-19 Score=144.28 Aligned_cols=128 Identities=19% Similarity=0.193 Sum_probs=92.8
Q ss_pred EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813 14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP 93 (171)
Q Consensus 14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (171)
.|||+|||+||+||+||+++|+|+ | +++.+.||.|+|||+||++|++++.+. ...+++.+++..+.+
T Consensus 1 ~L~l~GGG~rG~yhiGVl~~L~e~-----g--~~l~~~~~~i~GtSaGAl~aa~~a~~~------~~~~~~~~~~~~~~~ 67 (246)
T cd07222 1 NLSFAACGFLGIYHLGAAKALLRH-----G--KKLLKRVKRFAGASAGSLVAAVLLTAP------EKIEECKEFTYKFAE 67 (246)
T ss_pred CeeEcccHHHHHHHHHHHHHHHHc-----C--chhhccCCEEEEECHHHHHHHHHhcCh------HHHHHHHHHHHHHHH
Confidence 389999999999999999999997 2 244567999999999999999998542 135666655544332
Q ss_pred cccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813 94 KIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF 168 (171)
Q Consensus 94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~ 168 (171)
.+..... .. ..+.|+ .+.|++.+++.++.........++.|++||+.+++.++|++++.+.
T Consensus 68 ~~~~~~~-------------~~-~~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~aTdl~tg~~v~~~~f~s~~ 129 (246)
T cd07222 68 EVRKQRF-------------GA-MTPGYDFMARLRKGIESILPTDAHELANDRLHVSITNLKTRKNYLVSNFTSRE 129 (246)
T ss_pred HHHhccc-------------CC-CCCcchHHHHHHHHHHHHCCHHHHhcCCCcEEEEEEECCCCCeEEEeccCCcc
Confidence 2221110 01 122333 6778999999998754433458999999999999999999876554
No 23
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=99.80 E-value=6.2e-19 Score=140.60 Aligned_cols=127 Identities=17% Similarity=0.145 Sum_probs=96.9
Q ss_pred EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813 14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP 93 (171)
Q Consensus 14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (171)
.|||+|||+||+||+||+++|+|+. +++...||.|+|||+||++|+.++.+. +++++.+.+.++.+
T Consensus 2 ~Lsl~GGG~rG~yh~GVl~aL~e~~-------~~l~~~~~~i~GtSAGAl~aa~~asg~-------~~~~~~~~~~~~~~ 67 (252)
T cd07221 2 SLSFAGCGFLGFYHVGVTRCLSERA-------PHLLRDARMFFGASAGALHCVTFLSGL-------PLDQILQILMDLVR 67 (252)
T ss_pred EEEEeCcHHHHHHHHHHHHHHHHhC-------cchhccCCEEEEEcHHHHHHHHHHhCC-------CHHHHHHHHHHHHH
Confidence 5999999999999999999999972 234456999999999999999999884 57788887776643
Q ss_pred cccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813 94 KIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF 168 (171)
Q Consensus 94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~ 168 (171)
..-.+. + .+.++.|+ .+.+++.+++.++.........++.|++||+.+++.++|++++.+.
T Consensus 68 ~~~~~~----~----------g~~~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~~T~l~tg~~v~~~~f~s~~ 129 (252)
T cd07221 68 SARSRN----I----------GILHPSFNLSKHLRDGLQRHLPDNVHQLISGKMCISLTRVSDGENVLVSDFHSKD 129 (252)
T ss_pred hccccc----c----------cccCcccCHHHHHHHHHHHHCCcCHHHhcCCCEEEEEEECCCCCEEEEecCCCch
Confidence 211111 0 11223343 5788889999888754444467899999999999999999887654
No 24
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=99.79 E-value=6.5e-19 Score=146.18 Aligned_cols=131 Identities=14% Similarity=0.166 Sum_probs=100.3
Q ss_pred CceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813 10 KKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL 89 (171)
Q Consensus 10 ~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~ 89 (171)
+.-..|+|+|||+||+||+||+++|+|+ | +.+...||.|+|||+||++|++++.+. +++|+.+++.
T Consensus 10 ~~~~gLvFsGGGfrGiYHvGVl~aL~E~-----g--p~ll~~~d~IaGtSAGALvAAl~asG~-------s~de~~r~~~ 75 (382)
T cd07219 10 DTPHSISFSGSGFLSFYQAGVVDALRDL-----A--PRMLETAHRVAGTSAGSVIAALVVCGI-------SMDEYLRVLN 75 (382)
T ss_pred CCCceEEEcCcHHHHHHHHHHHHHHHhc-----C--CcccccCCeEEEEcHHHHHHHHHHhCC-------CHHHHHHHHH
Confidence 3456899999999999999999999996 2 234567999999999999999999983 6788877765
Q ss_pred hhCCcccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813 90 EHGPKIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF 168 (171)
Q Consensus 90 ~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~ 168 (171)
...++. .... + .+..+.++ .+.+++.|++.+++..+.+...++.|++||+.+|+.++|++++.+.
T Consensus 76 ~~~~~~-r~~~---l----------G~~~p~~~l~~~lr~~L~~~LP~da~e~~~g~L~IsaTdl~tGknv~fS~F~S~~ 141 (382)
T cd07219 76 VGVAEV-RKSF---L----------GPLSPSCKMVQMMRQFLYRVLPEDSYKVATGKLHVSLTRVTDGENVVVSEFTSKE 141 (382)
T ss_pred HHHHHH-HHhh---c----------cCccccchHHHHHHHHHHhhCcHhhHHhCCCcEEEEEEECCCCCEEEEeccCCcc
Confidence 433221 1110 0 11112222 2677889999999988988999999999999999999999887654
No 25
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=99.79 E-value=6.6e-19 Score=132.79 Aligned_cols=115 Identities=22% Similarity=0.281 Sum_probs=81.7
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC-
Q 030813 15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP- 93 (171)
Q Consensus 15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~- 93 (171)
|+|+|||+||+||+|||++|+|+ .+ .||.|+|||+||++|++++.+. +.+++..++.++..
T Consensus 1 Lvl~GGG~rG~~~~Gvl~aL~e~---------gi--~~d~v~GtSaGAi~aa~~a~g~-------~~~~~~~~~~~~~~~ 62 (172)
T cd07198 1 LVLSGGGALGIYHVGVAKALRER---------GP--LIDIIAGTSAGAIVAALLASGR-------DLEEALLLLLRLSRE 62 (172)
T ss_pred CEECCcHHHHHHHHHHHHHHHHc---------CC--CCCEEEEECHHHHHHHHHHcCC-------CHHHHHHHHHHHHHH
Confidence 78999999999999999999997 22 4999999999999999999984 56666665532211
Q ss_pred --cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeC
Q 030813 94 --KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFST 163 (171)
Q Consensus 94 --~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~ 163 (171)
..+... + .....+....++..+ +.+....+++...++.|++||+.++++++|..
T Consensus 63 ~~~~~~~~----~-----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~at~l~tg~~~~~~~ 118 (172)
T cd07198 63 VRLRFDGA----F-----------PPTGRLLGILRQPLL-SALPDDAHEDASGKLFISLTRLTDGENVLVSD 118 (172)
T ss_pred HHHhccCC----c-----------CcccchhHHHHHHHH-HhccHhHHHHCCCCEEEEEEECCCCCEEEEeC
Confidence 111110 0 011122222233333 33556778889999999999999999999965
No 26
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=99.78 E-value=1.8e-18 Score=141.48 Aligned_cols=135 Identities=24% Similarity=0.272 Sum_probs=98.8
Q ss_pred CCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHH
Q 030813 9 GKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFY 88 (171)
Q Consensus 9 ~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~ 88 (171)
.++...|+|.|||+||++|+|||++|+|+ | ..||+|+|||+||++|++++.+. +.++...+-
T Consensus 8 ~~~~i~LvL~GGgArG~~hiGVl~aL~e~-----g------i~~~~iaGtS~GAiva~l~A~g~-------~~~~~~~~~ 69 (306)
T COG1752 8 AKLRIGLVLGGGGARGAAHIGVLKALEEA-----G------IPIDVIAGTSAGAIVAALYAAGM-------DEDELELAA 69 (306)
T ss_pred cCceEEEEecCcHHHHHHHHHHHHHHHHc-----C------CCccEEEecCHHHHHHHHHHcCC-------ChhHHHHHH
Confidence 34458999999999999999999999997 2 36999999999999999999984 344444433
Q ss_pred HhhCCcccC-CCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCC--CccccCCc-eEEEeeeCCCCCeEEeeCC
Q 030813 89 LEHGPKIFP-QISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDV--TVKETLTN-VVIPTFDIKLLQPVIFSTT 164 (171)
Q Consensus 89 ~~~~~~if~-~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~--~l~d~~~~-~~i~a~di~~~~~~~f~~~ 164 (171)
..+...... ....... +. .+......+.++.+.+.+.+++++++. .+.++..+ +.|+++|+.+++.++|++.
T Consensus 70 ~~l~~~~~~~~~~~~~~-d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~atd~~~g~~~~~~~g 145 (306)
T COG1752 70 QRLTARWDNARDLLRLL-DL---TLPGGRPLGLLRGEKLRNLLRELLGDLLFDFEDLPIPLLYVVATDLLTGREVVFSEG 145 (306)
T ss_pred HHHHhhhccccchhhcc-ch---hhhccCccceecHHHHHHHHHHHhcccccCHHHcCCCcEEEEeeEcCCCCEEEecCC
Confidence 332211110 0000000 00 000000236889999999999999999 99999999 9999999999999999875
Q ss_pred C
Q 030813 165 D 165 (171)
Q Consensus 165 ~ 165 (171)
.
T Consensus 146 ~ 146 (306)
T COG1752 146 S 146 (306)
T ss_pred c
Confidence 4
No 27
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=99.78 E-value=1.8e-18 Score=137.70 Aligned_cols=129 Identities=16% Similarity=0.092 Sum_probs=96.5
Q ss_pred eEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhh
Q 030813 12 ITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEH 91 (171)
Q Consensus 12 ~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~ 91 (171)
...|||+|||+||+||+||+++|+|+ | +.+.+.+|.|+|+|+||++|+.++.+. +.+++.+...++
T Consensus 4 ~~~LsfsGGG~rG~yh~GVl~~L~e~-----g--~~l~~~~~~i~G~SAGAl~aa~~a~g~-------~~~~~~~~~~~~ 69 (249)
T cd07220 4 GWNISFAGCGFLGVYHVGVASCLLEH-----A--PFLVANARKIYGASAGALTATALVTGV-------CLGECGASVIRV 69 (249)
T ss_pred CceEEEeChHHHHHHHHHHHHHHHhc-----C--CcccccCCeEEEEcHHHHHHHHHHcCC-------CHHHHHHHHHHH
Confidence 46799999999999999999999997 2 234456999999999999999999984 566655555444
Q ss_pred CCcccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813 92 GPKIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF 168 (171)
Q Consensus 92 ~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~ 168 (171)
.++. .+...+. ..+.|+ .+.+++.+++.+++..+.....++.|++||+.+++.++|+++..+.
T Consensus 70 a~~~-r~~~~g~-------------~~~~~~l~~~l~~~l~~~lp~~a~~~~~~~l~is~T~~~tg~~~~~s~f~s~~ 133 (249)
T cd07220 70 AKEA-RKRFLGP-------------LHPSFNLVKILRDGLLRTLPENAHELASGRLGISLTRVSDGENVLVSDFNSKE 133 (249)
T ss_pred HHHh-hHhhccC-------------ccccchHHHHHHHHHHHHCChhhHHHCCCcEEEEEEECCCCCEEEEecCCCcc
Confidence 3221 0000001 112222 2468888888888888888889999999999999999999887654
No 28
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=99.74 E-value=2e-17 Score=139.89 Aligned_cols=133 Identities=17% Similarity=0.178 Sum_probs=96.9
Q ss_pred ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813 11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE 90 (171)
Q Consensus 11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (171)
+..+|+|+|||+||++|+|||++|+|+ . ..||+|+|||+||++|++++.+ +.+|+.+++..
T Consensus 66 grtALvLsGGG~rG~~h~GVlkaL~e~---------g--llp~iI~GtSAGAivaalla~~--------t~~el~~~~~~ 126 (407)
T cd07232 66 GRTALCLSGGAAFAYYHFGVVKALLDA---------D--LLPNVISGTSGGSLVAALLCTR--------TDEELKQLLVP 126 (407)
T ss_pred CCEEEEECCcHHHHHHHHHHHHHHHhC---------C--CCCCEEEEECHHHHHHHHHHcC--------CHHHHHHHHhh
Confidence 457999999999999999999999997 2 3589999999999999999985 45777777654
Q ss_pred hCCcccCCCcccchhhHHHhhhhhhc-cCCCCChHHHHHH-HHHHhCCCCcccc----CCceEEEeeeCCCCCeEEeeCC
Q 030813 91 HGPKIFPQISRSNFSESIASSIDKRL-LGPKYDGKYLRAL-VNELLGDVTVKET----LTNVVIPTFDIKLLQPVIFSTT 164 (171)
Q Consensus 91 ~~~~if~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~~-l~~~~~~~~l~d~----~~~~~i~a~di~~~~~~~f~~~ 164 (171)
.....|......++ ..+.+.+ .+..+|.+.+++. ++..+++.++.+. .+.+-|++++.+++++..|.||
T Consensus 127 ~~~~~~~~~~~~~~-----~~~~~~l~~G~~~d~~~l~~~~~~~~~gd~TFeEa~~~tgr~l~I~vt~~d~~~~~~lln~ 201 (407)
T cd07232 127 ELARKITACEPPWL-----VWIPRWLKTGARFDSVEWARTCCWFTRGSMTFEEAYERTGRILNISVVPADPHSPTILLNY 201 (407)
T ss_pred hhhhhhhhccchHH-----HHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCHHHHHHhcCCEEEEEEEECCCCCceEEecc
Confidence 32221211111111 1111222 3467999999998 7889999888876 3457788888888888888887
Q ss_pred Ccc
Q 030813 165 DVC 167 (171)
Q Consensus 165 ~~~ 167 (171)
...
T Consensus 202 ~ts 204 (407)
T cd07232 202 LTS 204 (407)
T ss_pred CCC
Confidence 543
No 29
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=99.73 E-value=3.2e-17 Score=139.18 Aligned_cols=131 Identities=21% Similarity=0.354 Sum_probs=95.0
Q ss_pred CceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813 10 KKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL 89 (171)
Q Consensus 10 ~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~ 89 (171)
=+..+|+|+|||+||++|+|||++|+|+ .+ .||+|+|||+||++|++++.+ +.+|+.+++.
T Consensus 71 ~GrtALvLsGGG~rG~~hiGVLkaL~E~---------gl--~p~vIsGTSaGAivAal~as~--------~~eel~~~l~ 131 (421)
T cd07230 71 FGRTALLLSGGGTFGMFHIGVLKALFEA---------NL--LPRIISGSSAGSIVAAILCTH--------TDEEIPELLE 131 (421)
T ss_pred cCCEEEEEcCcHHHHHHHHHHHHHHHHc---------CC--CCCEEEEECHHHHHHHHHHcC--------CHHHHHHHHH
Confidence 3567999999999999999999999987 22 589999999999999999985 4688888777
Q ss_pred hhCC---cccCCCcccchhhHHHhhhhhhc-cCCCCChHHHHHHHHHHhCCCCcccc----CCceEEEeeeCCCCC-eEE
Q 030813 90 EHGP---KIFPQISRSNFSESIASSIDKRL-LGPKYDGKYLRALVNELLGDVTVKET----LTNVVIPTFDIKLLQ-PVI 160 (171)
Q Consensus 90 ~~~~---~if~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~~l~~~~~~~~l~d~----~~~~~i~a~di~~~~-~~~ 160 (171)
.... .+|..... . ..+...+.+.+ .++.||.+.+++.+++.+++.+|.+. .+.+.|++++.+.++ |.+
T Consensus 132 ~~~~~~~~~f~~~~~--~-~~~~~~~~~l~~~g~~~d~~~l~~~l~~~lgd~tF~Eay~rt~r~L~I~vt~~~~~~~p~l 208 (421)
T cd07230 132 EFPYGDFNVFEDPDQ--E-ENVLQKLSRFLKYGSWFDISHLTRVMRGFLGDLTFQEAYNRTRRILNITVSPASIYELPRL 208 (421)
T ss_pred hcchHHHHHHhcccc--c-chHHHHHHHHHhcCCCcCHHHHHHHHHHHhCCCCHHHHHHhhCCeEEEEEEeccccCCCee
Confidence 6432 23433210 0 01102222222 35689999999999999999988775 456778888777765 444
Q ss_pred ee
Q 030813 161 FS 162 (171)
Q Consensus 161 f~ 162 (171)
+.
T Consensus 209 ln 210 (421)
T cd07230 209 LN 210 (421)
T ss_pred ee
Confidence 43
No 30
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=99.70 E-value=8.2e-17 Score=127.10 Aligned_cols=118 Identities=14% Similarity=0.123 Sum_probs=90.0
Q ss_pred EEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCC
Q 030813 14 VLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGP 93 (171)
Q Consensus 14 ~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (171)
.|||+|||.+|+||+|||++|+|+ .+...|+.|+|+|+||++|++++.+. +.+++.+++.++..
T Consensus 1 glsfsggG~lg~yh~GVl~~L~e~---------gi~~~~~~i~G~SAGAl~aa~~asg~-------~~~~~~~~~~~~~~ 64 (233)
T cd07224 1 GFSFSAAGLLFPYHLGVLSLLIEA---------GVINETTPLAGASAGSLAAACSASGL-------SPEEALEATEELAE 64 (233)
T ss_pred CeeecchHHHHHHHHHHHHHHHHc---------CCCCCCCEEEEEcHHHHHHHHHHcCC-------CHHHHHHHHHHHHH
Confidence 389999999999999999999997 34345899999999999999999984 57778777776653
Q ss_pred cccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccC-CceEEEeeeCCCCC-eEEeeCCCc
Q 030813 94 KIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETL-TNVVIPTFDIKLLQ-PVIFSTTDV 166 (171)
Q Consensus 94 ~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~-~~~~i~a~di~~~~-~~~f~~~~~ 166 (171)
+.+... ..++ ...+++.+++.++......+. .++.|++|++.+++ .++++.+..
T Consensus 65 ~~~~~~-------------------~~~~~~~~l~~~l~~~lp~d~~e~~~~~~l~i~~T~~~~~~~~~~v~~f~~ 121 (233)
T cd07224 65 DCRSNG-------------------TAFRLGGVLRDELDKTLPDDAHERCNRGRIRVAVTQLFPVPRGLLVSSFDS 121 (233)
T ss_pred HHHhcC-------------------CcccHHHHHHHHHHHHcCcHHHHHhcCCCEEEEEEecccCCCceEEEecCC
Confidence 332111 1122 356778889989888777777 89999999998763 666655543
No 31
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=99.70 E-value=1.5e-16 Score=133.13 Aligned_cols=138 Identities=21% Similarity=0.243 Sum_probs=98.3
Q ss_pred ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813 11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE 90 (171)
Q Consensus 11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (171)
+..+|+|+|||++|++|+||+++|+|+ . -.+|+|+|||+|||+|++++.+ +.+|+.+++..
T Consensus 82 GrtAlvlsGGg~~G~~h~Gv~kaL~e~---------g--l~p~~i~GtS~Gaivaa~~a~~--------~~~e~~~~l~~ 142 (391)
T cd07229 82 GRTALVLQGGSIFGLCHLGVVKALWLR---------G--LLPRIITGTATGALIAALVGVH--------TDEELLRFLDG 142 (391)
T ss_pred CCEEEEecCcHHHHHHHHHHHHHHHHc---------C--CCCceEEEecHHHHHHHHHHcC--------CHHHHHHHHhc
Confidence 467999999999999999999999997 2 3589999999999999999985 46888887764
Q ss_pred hCCc--ccCC---------CcccchhhHHHhhhhhhc-cCCCCChHHHHHHHHHHhCCCCcccc----CCceEEEeeeCC
Q 030813 91 HGPK--IFPQ---------ISRSNFSESIASSIDKRL-LGPKYDGKYLRALVNELLGDVTVKET----LTNVVIPTFDIK 154 (171)
Q Consensus 91 ~~~~--if~~---------~~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~~l~~~~~~~~l~d~----~~~~~i~a~di~ 154 (171)
..-. .|.. ...+++ ..+...+.+.+ .+..+|.+.|++.+++.+|+.+|+|. .+.+-|++++.+
T Consensus 143 ~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~r~l~~G~l~D~~~l~~~lr~~lgd~TFeEAy~rTgriLnItv~~~~ 221 (391)
T cd07229 143 DGIDLSAFNRLRGKKSLGYSGYGWL-GTLGRRIQRLLREGYFLDVKVLEEFVRANLGDLTFEEAYARTGRVLNITVAPSA 221 (391)
T ss_pred cchhhhhhhhhcccccccccccccc-chHHHHHHHHHcCCCcccHHHHHHHHHHHcCCCcHHHHHHhhCCEEEEEEECCC
Confidence 3211 1111 000011 00101112222 35589999999999999999999886 466778888765
Q ss_pred -CCCeEEeeCCCccc
Q 030813 155 -LLQPVIFSTTDVCF 168 (171)
Q Consensus 155 -~~~~~~f~~~~~~~ 168 (171)
.+.|.+++-..+++
T Consensus 222 ~~~~p~LLNylTaPn 236 (391)
T cd07229 222 VSGSPNLLNYLTAPN 236 (391)
T ss_pred CCCCCeeeecCCCCC
Confidence 56788877655543
No 32
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=99.68 E-value=3.4e-16 Score=129.94 Aligned_cols=131 Identities=15% Similarity=0.081 Sum_probs=102.2
Q ss_pred CceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813 10 KKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL 89 (171)
Q Consensus 10 ~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~ 89 (171)
.+...|+|+|||.+|+||+||+++|.|+.+ .+....+-|+|+|+|||+|++++.+. +++++.+...
T Consensus 7 ~~~~~LsfSGgGflG~yHvGV~~~L~e~~p-------~ll~~~~~iaGaSAGAL~aa~~a~g~-------~~~~~~~~i~ 72 (405)
T cd07223 7 EGGWNLSFSGAGYLGLYHVGVTECLRQRAP-------RLLQGARRIYGSSSGALNAVSIVCGK-------SADFCCSNLL 72 (405)
T ss_pred CCCEEEEEeCcHHHHHHHHHHHHHHHHhCc-------hhhccCCeeeeeCHHHHHHHHHHhCC-------CHHHHHHHHH
Confidence 455789999999999999999999999832 44456788999999999999999984 5675555443
Q ss_pred hhCCcccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCccc
Q 030813 90 EHGPKIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVCF 168 (171)
Q Consensus 90 ~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~~ 168 (171)
++.++.-. . ..+..++.|+ .+.+++.|++.++++....+..++.|++|++.+++-++.++|..+.
T Consensus 73 ~ia~~~r~-~-------------~lG~~~p~f~l~~~lr~~L~~~LP~daHe~~sgrL~ISlT~l~~gknvlvS~F~Sre 138 (405)
T cd07223 73 GMVKHLER-L-------------SLGIFHPAYAPIEHIRQQLQESLPPNIHILASQRLGISMTRWPDGRNFIVTDFATRD 138 (405)
T ss_pred HHHHHhhh-h-------------ccCCCCccccHHHHHHHHHHHhCCchhhHHhCCceEEEEEEccCCceEEecCCCCHH
Confidence 33322100 0 0123456666 6789999999999999999999999999999999999998887764
No 33
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=99.63 E-value=2.2e-16 Score=140.24 Aligned_cols=127 Identities=20% Similarity=0.252 Sum_probs=93.5
Q ss_pred ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHH-HHHHHHH
Q 030813 11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAK-DINNFYL 89 (171)
Q Consensus 11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~-~~~~~~~ 89 (171)
.-..|+|.|||+||++|+|||++|||+ | .++|+|.|||+||++++++|-..+ . ..+. .+.+++.
T Consensus 838 naIgLVLGGGGARG~ahiGvl~ALeE~-----G------IPvD~VGGTSIGafiGaLYA~e~d-~---~~v~~rak~f~~ 902 (1158)
T KOG2968|consen 838 NAIGLVLGGGGARGAAHIGVLQALEEA-----G------IPVDMVGGTSIGAFIGALYAEERD-L---VPVFGRAKKFAG 902 (1158)
T ss_pred CeEEEEecCcchhhhhHHHHHHHHHHc-----C------CCeeeeccccHHHhhhhhhhccCc-c---hHHHHHHHHHHH
Confidence 357899999999999999999999997 3 358999999999999999995421 0 0111 2222222
Q ss_pred hhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCC
Q 030813 90 EHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTT 164 (171)
Q Consensus 90 ~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~ 164 (171)
++. ++| ..+ .. +.+...++|+...+..-+.+.||+..++|++.+.++.+||+.+-...+.+|.
T Consensus 903 ~ms---------siw-~~l-lD-LTyP~tsmftGh~FNrsI~~~Fgd~~IEDlWi~yfciTTdIt~S~mriH~~G 965 (1158)
T KOG2968|consen 903 KMS---------SIW-RLL-LD-LTYPITSMFTGHEFNRSIHSTFGDVLIEDLWIPYFCITTDITSSEMRVHRNG 965 (1158)
T ss_pred HHH---------HHH-HHH-Hh-ccccchhccchhhhhhHHHHHhcccchhhhhheeeecccccchhhhhhhcCC
Confidence 211 122 110 11 1223457899999999999999999999999999999999998877777664
No 34
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=99.48 E-value=1.9e-13 Score=111.46 Aligned_cols=59 Identities=22% Similarity=0.418 Sum_probs=50.6
Q ss_pred ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHH
Q 030813 11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFY 88 (171)
Q Consensus 11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~ 88 (171)
+..+|+|+|||++|++|+||+++|+|+ . -.+|+|+|+|+||++|++++.+ +.+|+.+++
T Consensus 67 G~~aLvlsGGg~~g~~h~GVlkaL~e~---------g--l~p~~i~GsSaGAivaa~~~~~--------t~~El~~~~ 125 (323)
T cd07231 67 GRTALLLSGGAALGTFHVGVVRTLVEH---------Q--LLPRVIAGSSVGSIVCAIIATR--------TDEELQSFF 125 (323)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHHHHHc---------C--CCCCEEEEECHHHHHHHHHHcC--------CHHHHHHHH
Confidence 457999999999999999999999997 2 2589999999999999999974 456766654
No 35
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=99.46 E-value=1.7e-14 Score=107.96 Aligned_cols=113 Identities=22% Similarity=0.286 Sum_probs=65.3
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCCc
Q 030813 15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPK 94 (171)
Q Consensus 15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (171)
|+|+|||+||++++|+|++| + .+..+.||+|+|||+||++|++++.+.... ...+++.+++......
T Consensus 1 LvlsGGG~rg~~~~G~l~~L-~---------~~~~~~~d~i~GtS~Gal~a~~~~~~~~~~---~~~~~~~~~~~~~~~~ 67 (204)
T PF01734_consen 1 LVLSGGGSRGAYQAGVLKAL-G---------QGLGERFDVISGTSAGALNAALLALGYDPD---ESLDQFYDLWRNLFFS 67 (204)
T ss_dssp EEE---CCGCCCCHHHHHHH-C---------CTGCCT-SEEEEECCHHHHHHHHHTC-TCC---CCCCHHCCHHHHHHHC
T ss_pred CEEcCcHHHHHHHHHHHHHH-h---------hhhCCCccEEEEcChhhhhHHHHHhCCCHH---HHHHHHHHHHHhhccc
Confidence 89999999999999999998 1 144578999999999999999999884322 2234455555443211
Q ss_pred cc-CCCcccchhhHHHhhhh-hhccCCCCChHHHHHHHHHHhCCCCccccC
Q 030813 95 IF-PQISRSNFSESIASSID-KRLLGPKYDGKYLRALVNELLGDVTVKETL 143 (171)
Q Consensus 95 if-~~~~~~~~~~~~~~~~~-~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~ 143 (171)
.. .... .. ........ .......|+.+.+++.+++.++.....+..
T Consensus 68 ~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 115 (204)
T PF01734_consen 68 SNLMKRR--RP-RKAFRRLRGLFGGSGLFDSEPLRDWLRRVLGDLTLEEFS 115 (204)
T ss_dssp CCTH---------HHT-------SSS-SS--HHHHHHHHHHHCCHCHHHHC
T ss_pred ccccccc--cc-ccccccccccccCccchhHHHHHHHHHHhccccCHHHhh
Confidence 11 0000 00 00000111 122456789999999999999887665543
No 36
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=99.42 E-value=2.2e-12 Score=115.46 Aligned_cols=140 Identities=17% Similarity=0.255 Sum_probs=95.4
Q ss_pred EEEEEeCCChhhHHHHHHHHHHHHHhhhcC------------------------CCCCCcCCccceeeeCChHHHHHHHh
Q 030813 13 TVLSIDGGGIRGIIPGTILAFLESKLQELD------------------------GPSARIADYFDVVAGTSTGGLVTTML 68 (171)
Q Consensus 13 ~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~------------------------g~~~~i~~~fD~i~GtS~Gaiia~~l 68 (171)
..|+|.|||++++|+.||+++|-+..+.-. +........||+|+|||+|||||+++
T Consensus 4 lalVl~GG~slA~y~~GV~~ei~~l~~~~~~~~~~~~~~~~~~~~~Y~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~l 83 (739)
T TIGR03607 4 LALVMYGGVSLAVYMHGVTKEINRLVRASRAYHGYPDEASAGTEAVYGALLELLGAHLRLRVRVDVISGTSAGGINGVLL 83 (739)
T ss_pred EEEEecCcHHHHHHHHHHHHHHHHHhhhhcccccccccccccchhHHHHHHHHhhhhhccCCCCceEEeeCHHHHHHHHH
Confidence 369999999999999999999988655310 00012346899999999999999999
Q ss_pred hCCCCCCCCccCHHHHHHHHHhhCC--cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCC------Ccc
Q 030813 69 TAPNKEGGPFIAAKDINNFYLEHGP--KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDV------TVK 140 (171)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~--~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~------~l~ 140 (171)
+.+.. ...+.+++.++|.+..+ +.+..... .+ . +..-..+.|+.+.+++.|.+.++.. ++.
T Consensus 84 A~~~~---~g~~~~~L~~~W~~~~d~~~lLd~~~~-~~------~-~~~~~~sLl~G~~l~~~L~~~L~~~~~~~~~~~~ 152 (739)
T TIGR03607 84 AYALA---YGADLDPLRDLWLELADIDALLRPDAK-AW------P-RLRRPGSLLDGEYFLPLLLDALAAMVRAGPAGPS 152 (739)
T ss_pred Hcccc---cCCCHHHHHHHHHhcccHHhhcChhhh-cc------c-cccCCccccccHHHHHHHHHHHHHhCCCCCCCcc
Confidence 98541 22578999999987643 22222110 00 0 0011235688999999999888643 455
Q ss_pred ccC-----CceEEEeeeCCCCCeE-EeeCC
Q 030813 141 ETL-----TNVVIPTFDIKLLQPV-IFSTT 164 (171)
Q Consensus 141 d~~-----~~~~i~a~di~~~~~~-~f~~~ 164 (171)
+++ .+++||+||+ .|+.. ++.+.
T Consensus 153 ~lp~~~~~~dL~VTaTDl-~G~~~~l~dd~ 181 (739)
T TIGR03607 153 LLPTGTRPLDLFVTATDL-RGRSTRLFDDD 181 (739)
T ss_pred ccccCCCCccEEEEEEcC-CCcEEEeecCC
Confidence 654 5799999999 66544 44444
No 37
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=99.39 E-value=1.7e-12 Score=105.38 Aligned_cols=50 Identities=24% Similarity=0.347 Sum_probs=45.1
Q ss_pred ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCC
Q 030813 11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~ 71 (171)
+..+|+|+|||+||++|+||+++|+|+ . ..+|+|+|||+||++|++++.+
T Consensus 68 g~~aLvlsGGg~~g~~h~Gvl~aL~e~---------~--l~~~~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 68 GRTALMLSGGASLGLFHLGVVKALWEQ---------D--LLPRVISGSSAGAIVAALLGTH 117 (298)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHHHHHc---------C--CCCCEEEEEcHHHHHHHHHHcC
Confidence 457899999999999999999999986 2 2589999999999999999986
No 38
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=99.39 E-value=1.2e-12 Score=97.21 Aligned_cols=46 Identities=37% Similarity=0.605 Sum_probs=42.2
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhh
Q 030813 15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLT 69 (171)
Q Consensus 15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~ 69 (171)
|+|+|||+||++|+|+|++|+|+ .+.+.||+++|||+||++++.++
T Consensus 1 l~~~GGg~~~~~~~gvl~~l~~~---------~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 1 LSFSGGGFRGMYHAGVLSALAER---------GLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CEEcCcHHHHHHHHHHHHHHHHh---------CCccCCCEEEEEcHHHHHHHHHh
Confidence 68999999999999999999997 33468999999999999999988
No 39
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=99.38 E-value=1.6e-12 Score=102.83 Aligned_cols=127 Identities=18% Similarity=0.203 Sum_probs=82.7
Q ss_pred CCCCCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHH
Q 030813 6 SAEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDIN 85 (171)
Q Consensus 6 ~~~~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~ 85 (171)
|..+....+|+++|||+||++++|||+++... + ..+||++.|||+||.+++.+.+.+ .+ .+..-+.
T Consensus 5 ~~~~~~kvaLV~EGGG~RgifTAGVLD~fl~a---------~-~~~f~~~~GvSAGA~n~~aYls~Q-~g---ra~~~~~ 70 (292)
T COG4667 5 PPYQPGKVALVLEGGGQRGIFTAGVLDEFLRA---------N-FNPFDLVVGVSAGALNLVAYLSKQ-RG---RARRVIV 70 (292)
T ss_pred CCcCCCcEEEEEecCCccceehHHHHHHHHHh---------c-cCCcCeeeeecHhHHhHHHHhhcC-Cc---hHHHHHH
Confidence 45566678999999999999999999999853 1 257999999999999999999875 22 2222222
Q ss_pred HHHHhhCCcccCCCcccchhhHHHhhhhhhc-cCCCCChHHHHHHH-HH--HhCCCCccccCCceEEEeeeCCCCCeEEe
Q 030813 86 NFYLEHGPKIFPQISRSNFSESIASSIDKRL-LGPKYDGKYLRALV-NE--LLGDVTVKETLTNVVIPTFDIKLLQPVIF 161 (171)
Q Consensus 86 ~~~~~~~~~if~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~~l-~~--~~~~~~l~d~~~~~~i~a~di~~~~~~~f 161 (171)
+ |... ++.|... +.+ .+..++-+-+-+.+ +. .|+.+++...+.+.++.|++..+++...+
T Consensus 71 ~-yt~d-~ry~~~~--------------~~vr~gn~~n~d~~~~~~~~~~~~fD~~tf~~~~~k~~~~~~~~~~g~~~~~ 134 (292)
T COG4667 71 E-YTTD-RRYFGPL--------------SFVRGGNYFNLDWAFEETPQKLFPFDFDTFSQDKGKFFYMATCRQDGEAVYY 134 (292)
T ss_pred H-hhcc-hhhcchh--------------hhhccCcccchHHHHhhccCcCCCccHHHHhcccCCeEEEEEeccCCcccee
Confidence 2 2211 1223221 111 12334443333322 22 23446777888899999999999986654
Q ss_pred e
Q 030813 162 S 162 (171)
Q Consensus 162 ~ 162 (171)
.
T Consensus 135 ~ 135 (292)
T COG4667 135 F 135 (292)
T ss_pred e
Confidence 4
No 40
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=99.32 E-value=3.8e-12 Score=109.79 Aligned_cols=163 Identities=47% Similarity=0.707 Sum_probs=128.0
Q ss_pred CCCCCceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCC--CCcCCccce-eeeCChHHHHHHHhhCCCCCCCCccCHH
Q 030813 6 SAEGKKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPS--ARIADYFDV-VAGTSTGGLVTTMLTAPNKEGGPFIAAK 82 (171)
Q Consensus 6 ~~~~~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~--~~i~~~fD~-i~GtS~Gaiia~~l~~~~~~~~~~~~~~ 82 (171)
|......++|+|||||+||+.+.-.+..++.+++.++|.. .++.+.||+ ++|+++|+++++++-.....++|++.+.
T Consensus 29 ~~~~~~~~~lsld~gg~~gi~~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~~~g~~~~gl~~aml~a~~~~~~P~~~a~ 108 (503)
T KOG0513|consen 29 PSYGGLVTILSLDGGGSRGINQGVSLAYLELRLQNIDGDPSAARLADYFDVSIAGTNTGGLITAMLFAPNDCGRPRFGAT 108 (503)
T ss_pred ccccccceEEEEcCccceehhhhhhhcccHHHHHhccCChHhhHhhhccCceeeccCCchhhhhhhhccccccCcccccc
Confidence 3444578999999999999999999999999999999974 678999999 9999999999999998887789999999
Q ss_pred HH-HHHHHhhCCcccCCCcc-c-chhhHHHhhhhhhccCCCCCh------HHHHHHHHHHhCCCCccccCCc----eEEE
Q 030813 83 DI-NNFYLEHGPKIFPQISR-S-NFSESIASSIDKRLLGPKYDG------KYLRALVNELLGDVTVKETLTN----VVIP 149 (171)
Q Consensus 83 ~~-~~~~~~~~~~if~~~~~-~-~~~~~~~~~~~~~~~~~~y~~------~~l~~~l~~~~~~~~l~d~~~~----~~i~ 149 (171)
++ +.++.+.+..+|.+... + .+..+. ..+.....+..|+. ++.....++.+|+.++.+...+ +.++
T Consensus 109 ~~~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~~~~i~ 187 (503)
T KOG0513|consen 109 DILWKFNLEKAPKLLEKFDDPNFIKGDLN-LALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENLLVVIP 187 (503)
T ss_pred chhhhhhhcCCCccccccccccccccccc-cceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCcceEEE
Confidence 99 88888888888866420 0 000000 01111123344444 5555666778999999998887 9999
Q ss_pred eeeCCCCCeEEeeCCCcccC
Q 030813 150 TFDIKLLQPVIFSTTDVCFT 169 (171)
Q Consensus 150 a~di~~~~~~~f~~~~~~~~ 169 (171)
++|++..+|.+|+.|....+
T Consensus 188 ~ldl~~~~P~lf~~~~~~~~ 207 (503)
T KOG0513|consen 188 CLDLKSLTPNLFSIYDALGT 207 (503)
T ss_pred eeccCcCCceeeeeeccccc
Confidence 99999999999999887654
No 41
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=99.11 E-value=1.6e-10 Score=98.36 Aligned_cols=133 Identities=19% Similarity=0.307 Sum_probs=93.4
Q ss_pred ceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813 11 KITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE 90 (171)
Q Consensus 11 ~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (171)
+.++|.|+||+.-|++|+|||+.|-|+ .+ .+.+|+|+|+|||+|++++.. +-+|+..++..
T Consensus 173 GrTAL~LsGG~tFGlfH~GVlrtL~e~---------dL--lP~IIsGsS~GaivAsl~~v~--------~~eEl~~Ll~~ 233 (543)
T KOG2214|consen 173 GRTALILSGGATFGLFHIGVLRTLLEQ---------DL--LPNIISGSSAGAIVASLVGVR--------SNEELKQLLTN 233 (543)
T ss_pred CceEEEecCCchhhhhHHHHHHHHHHc---------cc--cchhhcCCchhHHHHHHHhhc--------chHHHHHHhcc
Confidence 568999999999999999999999987 32 589999999999999999975 45788887766
Q ss_pred hCC---cccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccC---C---ceEEEeeeCCCCCeEEe
Q 030813 91 HGP---KIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETL---T---NVVIPTFDIKLLQPVIF 161 (171)
Q Consensus 91 ~~~---~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~---~---~~~i~a~di~~~~~~~f 161 (171)
.-. .+|.....+++ ..+ ++.+. .+..+|...+...+.+..++.+|.+.- . .++|+..++ .++|.+.
T Consensus 234 ~~~~~~~if~dd~~n~~-~~i-kr~~~--~G~~~Di~~l~~~~~~~~~~lTFqEAY~rTGrIlNItV~p~s~-~e~P~lL 308 (543)
T KOG2214|consen 234 FLHSLFNIFQDDLGNLL-TII-KRYFT--QGALFDISHLACVMKKRLGNLTFQEAYDRTGRILNIVVPPSSK-SEPPRLL 308 (543)
T ss_pred chHhhhhhhcCcchhHH-HHH-HHHHh--cchHHHHHHHHHHHHHHhcchhHHHHHHhhCceEEEEECcccc-CCChhHh
Confidence 532 34555442222 111 22211 356789999999999999988888762 2 344444443 3455555
Q ss_pred eCCCcc
Q 030813 162 STTDVC 167 (171)
Q Consensus 162 ~~~~~~ 167 (171)
+...++
T Consensus 309 NylTaP 314 (543)
T KOG2214|consen 309 NYLTAP 314 (543)
T ss_pred hccCCC
Confidence 544443
No 42
>KOG3773 consensus Adiponutrin and related vesicular transport proteins; predicted alpha/beta hydrolase [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.39 E-value=1.9e-07 Score=76.25 Aligned_cols=126 Identities=18% Similarity=0.126 Sum_probs=95.2
Q ss_pred eEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccce-eeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813 12 ITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDV-VAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE 90 (171)
Q Consensus 12 ~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~-i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (171)
...||+.|.|.-|+||.|+-..+-++.+. . .-|. |+|.|+|+++|..+..+. +.+++.+..-+
T Consensus 6 r~~lSfsg~gFlg~yh~gaa~~l~~~ap~------l---l~~~~~~GaSagsl~a~~ll~~~-------~l~~a~~~l~~ 69 (354)
T KOG3773|consen 6 RMNLSFSGCGFLGIYHVGAANCLPRHAPR------L---LKDRSIAGASAGSLVACDLLCGL-------SLEEATGELYK 69 (354)
T ss_pred hhheeecCCceeEEEecchHHHHHHHHHH------H---hccccccCcccchHHHhhhhccc-------cHHHHHHHHHH
Confidence 37899999999999999999999888653 1 2344 999999999999999873 57777665555
Q ss_pred hCCcccCCCcccchhhHHHhhhhhhccCCCCC-hHHHHHHHHHHhCCCCccccCCceEEEeeeCCCCCeEEeeCCCcc
Q 030813 91 HGPKIFPQISRSNFSESIASSIDKRLLGPKYD-GKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDVC 167 (171)
Q Consensus 91 ~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~~~i~a~di~~~~~~~f~~~~~~ 167 (171)
+..++-.++. ...+|.|+ .+.|++.+++.+.+.-......++.|.-|.+.+++-++.++|..+
T Consensus 70 ~v~e~~~~s~--------------g~~tP~f~~~~~l~~~le~~LPpda~~la~~rl~iSlTr~~~~~N~lis~F~s~ 133 (354)
T KOG3773|consen 70 MVDEARRKSL--------------GAFTPGFNLSDRLRSGLEDFLPPDAHWLASGRLHISLTRVKDRENVLISEFPSR 133 (354)
T ss_pred HHHHHHHhhc--------------CCCCCCcCHHHHHHHHHHHhCChHHHHHhhcceeEEEEeeeehhhhhhhccccH
Confidence 5444322221 22345555 799999999999987666677788999999999887777777654
No 43
>cd00147 cPLA2_like Cytosolic phospholipase A2, catalytic domain; hydrolyses arachidonyl phospholipids. Catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Calcium is required for cPLA2 to bind with membranes or phospholipids. Group IV cPLA2 includes six intercellular enzymes: cPLA2alpha, cPLA2beta, cPLA2gamma, cPLA2delta, cP
Probab=98.35 E-value=9.4e-07 Score=75.61 Aligned_cols=55 Identities=18% Similarity=0.300 Sum_probs=45.8
Q ss_pred CCCceEEEEEeCCChhh-HHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHH-HHHHhhCC
Q 030813 8 EGKKITVLSIDGGGIRG-IIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGL-VTTMLTAP 71 (171)
Q Consensus 8 ~~~~~~~LsLdGGG~rG-~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gai-ia~~l~~~ 71 (171)
.+.+..+|+++|||.|+ +.++|+|++|++. .+.+.+++|+|+|.|+. ++.+++.+
T Consensus 39 ~~~p~i~~~~sGGG~Ra~~~~~G~l~~l~~~---------gll~~~~yisg~Sgg~w~~~~~~~~~ 95 (438)
T cd00147 39 DEVPVIAILGSGGGYRAMTGGAGALKALDEG---------GLLDCVTYLSGLSGSTWLMASLYSNP 95 (438)
T ss_pred ccCceEEEEecCchHHHHHhhhHHHHHHHhC---------CchhccceeeeccchHHHHHHHHHcC
Confidence 35568899999999999 6899999999985 57789999999999994 55555544
No 44
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=98.14 E-value=1.2e-06 Score=76.05 Aligned_cols=124 Identities=19% Similarity=0.327 Sum_probs=90.9
Q ss_pred CceEEEEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHH
Q 030813 10 KKITVLSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYL 89 (171)
Q Consensus 10 ~~~~~LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~ 89 (171)
....++..+|||++ ...+|-+.++.+. . ..-..||++.|||+|+++++-++... +.+++...|.
T Consensus 292 ~~~~lv~~~G~G~~---~~q~l~~~e~~~~----~--a~~~~f~w~~gtstg~~~~~~i~~~~-------s~d~v~~~y~ 355 (503)
T KOG0513|consen 292 VDDNLVLSDGGGIP---IIQVLYWIEKRCG----T--AAWGYFDWFNGTSTGSTIMADIALDG-------SSDEVDRMYL 355 (503)
T ss_pred ccceEEEecCCCCh---hHHHHHhHHHhcc----c--ccccccccccccCcCceeehhhhhcc-------cHHHHHHHHH
Confidence 44568899999999 6677778887743 2 23468999999999999999998764 6777887888
Q ss_pred hhCCcccCCCcccchhhHHHhhhhhhccCCCCChHHHHHHHHHHhCCCCccccCC-ceEEEee--eCCCCCeEEeeCCCc
Q 030813 90 EHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLT-NVVIPTF--DIKLLQPVIFSTTDV 166 (171)
Q Consensus 90 ~~~~~if~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~~l~~~~~~~~l~d~~~-~~~i~a~--di~~~~~~~f~~~~~ 166 (171)
.+...+|... .+.|+..+++.+++..+|.....|... ++.|+.. |...-+...++||..
T Consensus 356 ~~k~~~F~~~------------------r~~~~~~~Ie~~~~~~~G~~~~~di~~~~~nl~~~~~~~~~~~l~~~rn~~~ 417 (503)
T KOG0513|consen 356 QMKDVVFDGL------------------RSEYNYVRIECAIDRLFGDAPSMDIDGIRLNLTGLLVDITGEELLMARNYRH 417 (503)
T ss_pred HHhHHhhhcc------------------cCCCCccchhhhhhcccCccccccCCcchhhhhhhhccccHHHHHHhhcccc
Confidence 7766666432 467999999999999999977777754 4444433 333345666777765
Q ss_pred c
Q 030813 167 C 167 (171)
Q Consensus 167 ~ 167 (171)
.
T Consensus 418 ~ 418 (503)
T KOG0513|consen 418 N 418 (503)
T ss_pred c
Confidence 3
No 45
>cd07202 cPLA2_Grp-IVC Group IVC cytoplasmic phospholipase A2; catalytic domain; Ca-independent. Group IVC cPLA2, a small 61 kDa protein, is a single domain alpha/beta hydrolase. It lacks a C2 domain; therefore, it has no Ca-dependence. Group IVC cPLA2 is also referred to as cPLA2-gamma. The cPLA2-gamma enzyme is predominantly found in cardiac and skeletal muscles, and to a lesser extent in the brain. Human cPLA2-gamma is approximately 30% identical to cPLA2-alpha. The catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 be
Probab=96.92 E-value=0.00097 Score=56.78 Aligned_cols=54 Identities=20% Similarity=0.292 Sum_probs=45.2
Q ss_pred CCCceEEEEEeCCChhhH-HHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhC
Q 030813 8 EGKKITVLSIDGGGIRGI-IPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 8 ~~~~~~~LsLdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~ 70 (171)
.+.+...|+++|||.|.+ ..+|+|++|.+. .+.+...+++|.|.|+-....|+.
T Consensus 36 d~~P~i~ia~SGGG~RAm~~~~G~l~al~~~---------GLl~~~tY~sglSGgsWl~~sLy~ 90 (430)
T cd07202 36 DKAPVIAVLGSGGGLRAMIACLGVLSELDKA---------GLLDCVTYLAGVSGSTWCMSSLYT 90 (430)
T ss_pred ccCCeEEEEecCccHHHHHhccHHHHHhhhC---------ChhhhhhhhccccchHHHHHHHHh
Confidence 355788999999999998 569999999885 567899999999999977555554
No 46
>cd07201 cPLA2_Grp-IVB-IVD-IVE-IVF Group IVB, IVD, IVE, and IVF cytosolic phospholipase A2; catalytic domain; Ca-dependent. Group IVB, IVD, IVE, and IVF cPLA2 consists of two domains: the regulatory C2 domain and alpha/beta hydrolase PLA2 domain. Group IVB, IVD, IVE, and IVF cPLA2 are also referred to as cPLA2-beta, -delta, -epsilon, and -zeta respectively. cPLA2-beta is approximately 30% identical to cPLA2-alpha and it shows low enzymatic activity compared to cPLA2alpha. cPLA2-beta hydrolyzes palmitic acid from 1-[14C]palmitoyl-2-arachidonoyl-PC and arachidonic acid from 1-palmitoyl-2[14C]arachidonoyl-PC, but not from 1-O-alkyl-2[3H]arachidonoyl-PC. cPLA2-delta, -epsilon, and -zeta are approximately 45-50% identical to cPLA2-beta and 31-37% identical to cPLA2-alpha. It's possible that cPLA2-beta, -delta, -epsilon, and -zeta may have arisen by gene duplication from an ancestral gene. The catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bon
Probab=96.37 E-value=0.0077 Score=52.78 Aligned_cols=54 Identities=19% Similarity=0.219 Sum_probs=44.5
Q ss_pred CCceEEEEEeCCChhhHHH-HHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCC
Q 030813 9 GKKITVLSIDGGGIRGIIP-GTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 9 ~~~~~~LsLdGGG~rG~~~-~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~ 71 (171)
+.+..+++++|||.|.+.. +|+|.+|.+. .+.+...+++|.|.|+=....++..
T Consensus 51 ~~P~Igia~SGGGyRAml~gaG~l~al~~~---------GLLq~~tYlaGlSGg~Wl~gSLy~n 105 (541)
T cd07201 51 EVPVVAVMTTGGGTRALTSMYGSLLGLQKL---------GLLDCVSYITGLSGSTWTMATLYED 105 (541)
T ss_pred cCCeEEEEecCccHHHHHhccHHHHhhhcC---------CchhhhheecccCccHHHHHHHHcC
Confidence 4567899999999999855 9999999763 4678999999999999885555543
No 47
>KOG1325 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=95.48 E-value=0.0078 Score=52.96 Aligned_cols=82 Identities=20% Similarity=0.333 Sum_probs=57.7
Q ss_pred CCCceEEEEEeCCChhhHHH-HHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHH
Q 030813 8 EGKKITVLSIDGGGIRGIIP-GTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINN 86 (171)
Q Consensus 8 ~~~~~~~LsLdGGG~rG~~~-~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~ 86 (171)
.+.++.+++.+|||.|.... .|+|.+|.++...- |. -.+.+..++++|.|.|+=.-.-|+..+ .++...+.+
T Consensus 45 ~d~P~vaIa~SGGG~RAMl~g~G~Laamder~~~~-~l-~GLLqs~tYlaGlSGstW~vssLa~nn-----~~s~~~l~~ 117 (571)
T KOG1325|consen 45 SDGPVVGIAGSGGGLRAMLSGAGALAAMDERTDNA-GL-GGLLQSATYLAGLSGGSWLVSSLAVNN-----FTSIQLLAD 117 (571)
T ss_pred CCCCeEEEEecCCCHHHHhhhhHHHHHHHhhccCC-cc-cchhhhhhhhcccCCCceeeeeeEECC-----chHhhhhcc
Confidence 35678899999999999866 89999999973211 10 146789999999999998777777643 245566666
Q ss_pred HHHhhCCccc
Q 030813 87 FYLEHGPKIF 96 (171)
Q Consensus 87 ~~~~~~~~if 96 (171)
.+-.....+|
T Consensus 118 ~~w~~~~~i~ 127 (571)
T KOG1325|consen 118 NVWNLRHSIF 127 (571)
T ss_pred chhhhhccee
Confidence 5333333333
No 48
>cd07200 cPLA2_Grp-IVA Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent. Group IVA cPLA2, an 85 kDa protein, consists of two domains: the regulatory C2 domain and the alpha/beta hydrolase PLA2 domain. Group IVA cPLA2 is also referred to as cPLA2-alpha. The catalytic domain of cytosolic phospholipase A2 (cPLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile
Probab=95.33 E-value=0.022 Score=49.80 Aligned_cols=52 Identities=23% Similarity=0.269 Sum_probs=43.3
Q ss_pred CCceEEEEEeCCChhhHHH-HHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhh
Q 030813 9 GKKITVLSIDGGGIRGIIP-GTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLT 69 (171)
Q Consensus 9 ~~~~~~LsLdGGG~rG~~~-~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~ 69 (171)
.-+..+++++|||-|.+.. +|+|.+|.+- .+.+...+++|.|-|+=.-..++
T Consensus 42 ~~P~Iaia~SGGGyRAMl~gaG~l~Ald~g---------GLLq~aTYlaGLSGgsWlvgsl~ 94 (505)
T cd07200 42 EVPVIALLGSGGGFRAMVGMSGAMKALYDS---------GVLDCATYVAGLSGSTWYMSTLY 94 (505)
T ss_pred cCCeEEEEecCccHHHHhhccHHHHhhhcC---------ChhhhhhhhhcCCccHHHHHHHH
Confidence 5578899999999999866 9999999873 57789999999999996554444
No 49
>cd07203 cPLA2_Fungal_PLB Fungal Phospholipase B-like; cPLA2 GrpIVA homologs; catalytic domain. Fungal phospholipase B are Group IV cPLA2 homologs. Aspergillus PLA2 is Ca-dependent, yet it does not contain a C2 domain. PLB deacylates both sn-1 and sn-2 chains of phospholipids and are abundantly expressed in fungi. It shows lysophospholipase (lysoPL) and transacylase activities. The active site residues from cPLA2 are also conserved in PLB. Like cPLA2, PLB also has a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). It includes PLB1 from Schizosaccharomyces pombe, PLB2 from Candida glabrata, and PLB3 from Saccharomyces cerevisiae. PLB1, PLB2, and PLB3 show PLB and lysoPL activities; PLB3 is specific for phosphoinositides.
Probab=95.10 E-value=0.023 Score=50.15 Aligned_cols=71 Identities=17% Similarity=0.315 Sum_probs=52.5
Q ss_pred CCceEEEEEeCCChhhHHH-HHHHHHHHHHhhhcC--CCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHH
Q 030813 9 GKKITVLSIDGGGIRGIIP-GTILAFLESKLQELD--GPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDIN 85 (171)
Q Consensus 9 ~~~~~~LsLdGGG~rG~~~-~gvL~~L~~~~~~~~--g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~ 85 (171)
+-+...|+++|||-|.+.. +|+|.+|..+...-. |. -.+.+...+++|.|-|+=+...|+..+. .+++++.
T Consensus 61 ~~P~Igia~SGGGyRAMl~GaG~l~AlD~Rt~~~~~~gl-gGLLQsatYlaGLSGGsWlvgSl~~Nnf-----~sv~~l~ 134 (552)
T cd07203 61 NGPRIGIAVSGGGYRAMLTGAGAIAAMDNRTDNATEHGL-GGLLQSSTYLSGLSGGSWLVGSLASNNF-----TSVQDLL 134 (552)
T ss_pred cCCeEEEEecCccHHHHHhccHHHHhhhccccccccccc-ccHHHHhhHhhhcCccchhhhhhhhCCC-----CCHHHHh
Confidence 4577899999999999855 999999987632100 00 1567889999999999988888776541 2566665
No 50
>PF01735 PLA2_B: Lysophospholipase catalytic domain; InterPro: IPR002642 This family consists of lysophospholipase / phospholipase B 3.1.1.5 from EC and cytosolic phospholipase A2 which also has a C2 domain IPR000008 from INTERPRO. Phospholipase B enzymes catalyse the release of fatty acids from lysophsopholipids and are capable in vitro of hydrolyzing all phospholipids extractable from yeast cells []. Cytosolic phospholipase A2 associates with natural membranes in response to physiological increases in Ca2+ and selectively hydrolyses arachidonyl phospholipids [], the aligned region corresponds the carboxy-terminal Ca2+-independent catalytic domain of the protein as discussed in [].; GO: 0004620 phospholipase activity, 0009395 phospholipid catabolic process; PDB: 1CJY_B.
Probab=95.08 E-value=0.028 Score=49.17 Aligned_cols=58 Identities=21% Similarity=0.360 Sum_probs=35.6
Q ss_pred EEEEEeCCChhhH-HHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCC
Q 030813 13 TVLSIDGGGIRGI-IPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 13 ~~LsLdGGG~rG~-~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~ 71 (171)
..|+++|||-|.+ +-+|+|.+|..+-+.-.| .-.+.+..++++|.|-|+=..+.|+..
T Consensus 1 Iaia~SGGG~RAml~gaG~l~Ald~R~~~~~~-~gGLLq~~tY~sGlSGgsW~~~sl~~~ 59 (491)
T PF01735_consen 1 IAIAGSGGGYRAMLAGAGVLSALDSRNPGANG-TGGLLQCATYISGLSGGSWLVGSLYSN 59 (491)
T ss_dssp EEEEE---HHHHHHHHHHHHHHHH---------HCS-GGGECEEEE-HHHHHHHHHH---
T ss_pred CeEEecCchHHHHHHHHHHHHHhhhhcccccc-ccchhhhhhhhhhcCcchhhhhhhhhc
Confidence 3689999999998 559999999954322110 015788999999999999888877654
No 51
>smart00022 PLAc Cytoplasmic phospholipase A2, catalytic subunit. Cytosolic phospholipases A2 hydrolyse arachidonyl phospholipids. Family includes phospholipases B isoforms.
Probab=94.65 E-value=0.037 Score=49.02 Aligned_cols=62 Identities=19% Similarity=0.364 Sum_probs=49.0
Q ss_pred CCceEEEEEeCCChhhHHH-HHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCC
Q 030813 9 GKKITVLSIDGGGIRGIIP-GTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPN 72 (171)
Q Consensus 9 ~~~~~~LsLdGGG~rG~~~-~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~ 72 (171)
+-+...++++|||-|.+.. +|+|.+|.++... .|. -.+.+...+++|.|.|+-+...++..+
T Consensus 74 ~~P~Igia~SGGGyRAml~gaG~l~ald~R~~~-~~l-gGLLq~~tYlaGlSGgsWlv~sl~~nn 136 (549)
T smart00022 74 DVPVIAIAGSGGGFRAMVGGAGVLKAMDNRTDG-HGL-GGLLQSATYLAGLSGGTWLVGTLASNN 136 (549)
T ss_pred cCceEEEEecCCCHHHHHhccHHHHHhhhcccc-ccc-ccHhhhhhhhhccchHHHHHHHHhhCC
Confidence 4567899999999999855 9999999986321 111 146788999999999999988888654
No 52
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=80.45 E-value=3.4 Score=31.53 Aligned_cols=18 Identities=39% Similarity=0.595 Sum_probs=16.3
Q ss_pred ceeeeCChHHHHHHHhhC
Q 030813 53 DVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~ 70 (171)
.+++|+|.||..|..++.
T Consensus 61 ~~liGSSlGG~~A~~La~ 78 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAE 78 (187)
T ss_pred eEEEEEChHHHHHHHHHH
Confidence 799999999999998873
No 53
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=80.24 E-value=7.9 Score=31.89 Aligned_cols=19 Identities=26% Similarity=0.363 Sum_probs=16.0
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
-.++|.|.||++|..++..
T Consensus 129 ~~l~G~S~Gg~ia~~~a~~ 147 (351)
T TIGR01392 129 AAVVGGSMGGMQALEWAID 147 (351)
T ss_pred eEEEEECHHHHHHHHHHHH
Confidence 4689999999999988743
No 54
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=80.21 E-value=4.8 Score=33.78 Aligned_cols=19 Identities=26% Similarity=0.363 Sum_probs=16.1
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
-.++|.|+||.+|..++..
T Consensus 149 ~~lvG~S~Gg~ia~~~a~~ 167 (379)
T PRK00175 149 AAVVGGSMGGMQALEWAID 167 (379)
T ss_pred eEEEEECHHHHHHHHHHHh
Confidence 3799999999999888753
No 55
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=79.93 E-value=4.8 Score=32.89 Aligned_cols=44 Identities=23% Similarity=0.250 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHH
Q 030813 26 IPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNF 87 (171)
Q Consensus 26 ~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~ 87 (171)
+++++.+.|.+. | ..+|.++|.|.|-+.|+..+.- ++.++...+
T Consensus 70 ~~~al~~~l~~~-----G------i~P~~v~GhSlGE~aA~~aaG~-------ls~e~a~~l 113 (318)
T PF00698_consen 70 IQVALARLLRSW-----G------IKPDAVIGHSLGEYAALVAAGA-------LSLEDALRL 113 (318)
T ss_dssp HHHHHHHHHHHT-----T------HCESEEEESTTHHHHHHHHTTS-------SSHHHHHHH
T ss_pred hhhhhhhhhccc-----c------cccceeeccchhhHHHHHHCCc-------cchhhhhhh
Confidence 455666666443 2 3689999999999987765532 566665554
No 56
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=79.03 E-value=6.2 Score=31.59 Aligned_cols=20 Identities=25% Similarity=0.376 Sum_probs=17.3
Q ss_pred ccceeeeCChHHHHHHHhhC
Q 030813 51 YFDVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 51 ~fD~i~GtS~Gaiia~~l~~ 70 (171)
.+|.++|.|.|-+.|+..+.
T Consensus 82 ~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 82 RPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred cccEEEecCHHHHHHHHHhC
Confidence 58999999999999887763
No 57
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=76.47 E-value=8.3 Score=30.68 Aligned_cols=20 Identities=25% Similarity=0.238 Sum_probs=16.9
Q ss_pred ccceeeeCChHHHHHHHhhC
Q 030813 51 YFDVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 51 ~fD~i~GtS~Gaiia~~l~~ 70 (171)
.+|.+.|.|.|-+.|+..+.
T Consensus 83 ~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 83 KPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCCEEeecCHHHHHHHHHhC
Confidence 58999999999987777664
No 58
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=75.35 E-value=9.2 Score=30.75 Aligned_cols=29 Identities=21% Similarity=0.235 Sum_probs=22.0
Q ss_pred ccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHH
Q 030813 51 YFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINN 86 (171)
Q Consensus 51 ~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~ 86 (171)
.++.+.|.|.|-+.|+..+.- ++.+|..+
T Consensus 76 ~P~~v~GhS~GE~aAa~~aG~-------~s~e~a~~ 104 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVAGV-------LTFDDALR 104 (295)
T ss_pred CCcEEeecCHHHHHHHHHhCC-------CCHHHHHH
Confidence 589999999999888887643 45555544
No 59
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=73.33 E-value=14 Score=30.61 Aligned_cols=21 Identities=33% Similarity=0.468 Sum_probs=17.3
Q ss_pred CccceeeeCChHHHHHHHhhC
Q 030813 50 DYFDVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 50 ~~fD~i~GtS~Gaiia~~l~~ 70 (171)
..+|+++|.|.|-+.|+..+.
T Consensus 123 ~~~~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 123 DSVDVCAGLSLGEYTALVFAG 143 (343)
T ss_pred cCCCeeeeccHHHHHHHHHhC
Confidence 357899999999988887663
No 60
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=71.95 E-value=10 Score=29.28 Aligned_cols=19 Identities=32% Similarity=0.434 Sum_probs=16.7
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
-.|+|.|+||..|+.++..
T Consensus 117 ~~i~G~S~GG~~Al~~~l~ 135 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALR 135 (251)
T ss_dssp EEEEEETHHHHHHHHHHHH
T ss_pred eEEeccCCCcHHHHHHHHh
Confidence 5999999999999988753
No 61
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=69.89 E-value=17 Score=30.03 Aligned_cols=37 Identities=19% Similarity=0.165 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhC
Q 030813 25 IIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 25 ~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~ 70 (171)
+.++.+++.|+++. ....+|+++|+|-|-..|++.+.
T Consensus 68 ~~s~a~~~~l~~~~---------~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 68 LVSLAAYRVLAEQG---------LGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHHHHHHHHhc---------CCCCCceeecccHhHHHHHHHcc
Confidence 45677788888762 13568999999999988887764
No 62
>PF06361 RTBV_P12: Rice tungro bacilliform virus P12 protein; InterPro: IPR009417 This family consists of several Rice tungro bacilliform virus P12 proteins. The function of this family is unknown [].
Probab=66.84 E-value=3.1 Score=27.65 Aligned_cols=43 Identities=16% Similarity=0.347 Sum_probs=27.2
Q ss_pred ChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHH
Q 030813 21 GIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTT 66 (171)
Q Consensus 21 G~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~ 66 (171)
..+|++++-.|+++.+.+..+.- .+...+.--.-.|+|+|+-+
T Consensus 46 askglvqlyalqeidkkinnl~a---qv~k~pttsgs~sagaivpa 88 (110)
T PF06361_consen 46 ASKGLVQLYALQEIDKKINNLSA---QVSKIPTTSGSSSAGAIVPA 88 (110)
T ss_pred hhhhHHHHHHHHHHHhhhhhhHh---hhhcCccCCCCCCcceeeec
Confidence 35899999999999888654322 33333333334567777654
No 63
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=66.34 E-value=2.5 Score=30.92 Aligned_cols=13 Identities=38% Similarity=0.754 Sum_probs=11.2
Q ss_pred ceeeeCChHHHHH
Q 030813 53 DVVAGTSTGGLVT 65 (171)
Q Consensus 53 D~i~GtS~Gaiia 65 (171)
=+++|+|+||++.
T Consensus 70 ~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 70 GVIIGTSAGAMIL 82 (154)
T ss_dssp SEEEEETHHHHCT
T ss_pred CEEEEEChHHhhc
Confidence 4799999999884
No 64
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=65.99 E-value=7.9 Score=30.56 Aligned_cols=33 Identities=33% Similarity=0.599 Sum_probs=26.0
Q ss_pred HHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhC
Q 030813 30 ILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 30 vL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~ 70 (171)
.|++|++.+.+ .| +||-+.|-|=||.++++++.
T Consensus 91 sl~yl~~~i~e-nG-------PFDGllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 91 SLEYLEDYIKE-NG-------PFDGLLGFSQGAALAALLAG 123 (230)
T ss_pred HHHHHHHHHHH-hC-------CCccccccchhHHHHHHhhc
Confidence 46666666543 23 59999999999999999987
No 65
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=64.61 E-value=5.1 Score=28.04 Aligned_cols=17 Identities=35% Similarity=0.683 Sum_probs=15.1
Q ss_pred eeeeCChHHHHHHHhhC
Q 030813 54 VVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~ 70 (171)
+++|.|.||-+|.+++.
T Consensus 67 ~itGHSLGGalA~l~a~ 83 (140)
T PF01764_consen 67 VITGHSLGGALASLAAA 83 (140)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred hhhccchHHHHHHHHHH
Confidence 67999999999998874
No 66
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=63.37 E-value=9.5 Score=29.28 Aligned_cols=20 Identities=40% Similarity=0.516 Sum_probs=16.9
Q ss_pred ccceeeeCChHHHHHHHhhC
Q 030813 51 YFDVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 51 ~fD~i~GtS~Gaiia~~l~~ 70 (171)
.||.|.|-|-||.+|+.|+.
T Consensus 102 PfdGvlGFSQGA~lAa~ll~ 121 (212)
T PF03959_consen 102 PFDGVLGFSQGAALAALLLA 121 (212)
T ss_dssp --SEEEEETHHHHHHHHHHH
T ss_pred CeEEEEeecHHHHHHHHHHH
Confidence 39999999999999998884
No 67
>PF12611 DUF3766: Protein of unknown function (DUF3766); InterPro: IPR013367 Proteins in this entry are encoded in a subset of bacterial flagellar operons, generally between genes designated flgD and flgE, in species as diverse as Bacillus halodurans and various other Firmicutes, Geobacter sulfurreducens, and Bdellovibrio bacteriovorus. The specific molecular function of this protein is unknown.
Probab=62.54 E-value=4.7 Score=20.31 Aligned_cols=20 Identities=25% Similarity=0.459 Sum_probs=17.5
Q ss_pred EEEeeeCCCCCeEEeeCCCc
Q 030813 147 VIPTFDIKLLQPVIFSTTDV 166 (171)
Q Consensus 147 ~i~a~di~~~~~~~f~~~~~ 166 (171)
+|+|.|-...+..+|+|.+.
T Consensus 2 VITamd~~~~k~nvFTNIDs 21 (24)
T PF12611_consen 2 VITAMDKEEMKENVFTNIDS 21 (24)
T ss_pred EEEEEChhHhhcCceecccc
Confidence 68999998899999999775
No 68
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=58.39 E-value=7.4 Score=29.17 Aligned_cols=17 Identities=35% Similarity=0.554 Sum_probs=15.3
Q ss_pred eeeeCChHHHHHHHhhC
Q 030813 54 VVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~ 70 (171)
.++|.|+||-+|+.++.
T Consensus 74 ~l~G~SAGg~la~~~~~ 90 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLAL 90 (211)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred EEeecccccchhhhhhh
Confidence 58999999999999884
No 69
>PRK06489 hypothetical protein; Provisional
Probab=58.18 E-value=13 Score=30.86 Aligned_cols=21 Identities=29% Similarity=0.428 Sum_probs=17.4
Q ss_pred ccceeeeCChHHHHHHHhhCC
Q 030813 51 YFDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 51 ~fD~i~GtS~Gaiia~~l~~~ 71 (171)
.+.+++|.|.||.+|..++..
T Consensus 154 ~~~~lvG~SmGG~vAl~~A~~ 174 (360)
T PRK06489 154 HLRLILGTSMGGMHAWMWGEK 174 (360)
T ss_pred ceeEEEEECHHHHHHHHHHHh
Confidence 455789999999999988754
No 70
>PF07812 TfuA: TfuA-like protein; InterPro: IPR012924 This domain consists of a group of sequences that are similar to the core of TfuA protein (Q52872 from SWISSPROT). This protein is involved in the production of trifolitoxin (TFX), a gene-encoded, post-translationally modified peptide antibiotic []. The role of TfuA in TFX synthesis is unknown, and it may be involved in other cellular processes [].
Probab=57.23 E-value=16 Score=26.00 Aligned_cols=47 Identities=23% Similarity=0.244 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813 25 IIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE 90 (171)
Q Consensus 25 ~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (171)
+.|-.||.+|.+ .+-++.+.|+||+-|+=+..... ..+-++.+.|.+
T Consensus 10 V~HkEIL~Al~~--------------Gv~V~GasSMGALRAaEl~~fGM-----~GvG~If~~Yr~ 56 (120)
T PF07812_consen 10 VWHKEILWALSQ--------------GVRVFGASSMGALRAAELAPFGM-----IGVGRIFEWYRD 56 (120)
T ss_pred ccHHHHHHHHHC--------------CCEEEecccHHHHHHHHhHhcCC-----EeehHHHHHHhc
Confidence 456677777654 36899999999999998775431 235566666654
No 71
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=54.79 E-value=15 Score=29.57 Aligned_cols=20 Identities=35% Similarity=0.396 Sum_probs=17.0
Q ss_pred cceeeeCChHHHHHHHhhCC
Q 030813 52 FDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 52 fD~i~GtS~Gaiia~~l~~~ 71 (171)
.=.++|.|+||.+++.++.-
T Consensus 153 ~i~v~GdSAGG~La~~~a~~ 172 (312)
T COG0657 153 RIAVAGDSAGGHLALALALA 172 (312)
T ss_pred ceEEEecCcccHHHHHHHHH
Confidence 45799999999999998853
No 72
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=53.55 E-value=16 Score=28.88 Aligned_cols=15 Identities=27% Similarity=0.153 Sum_probs=12.2
Q ss_pred ceeeeCChHHHHHHH
Q 030813 53 DVVAGTSTGGLVTTM 67 (171)
Q Consensus 53 D~i~GtS~Gaiia~~ 67 (171)
=.++|+|+||++++-
T Consensus 114 ~~~~G~SAGAii~~~ 128 (233)
T PRK05282 114 TPYIGWSAGANVAGP 128 (233)
T ss_pred CEEEEECHHHHhhhc
Confidence 368999999999654
No 73
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=53.55 E-value=21 Score=30.76 Aligned_cols=40 Identities=18% Similarity=0.365 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCC
Q 030813 27 PGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 27 ~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~ 71 (171)
++.+|+.+.+++....|++.+ =.+.|.|+||..+..+...
T Consensus 157 ~~~al~wv~~~i~~fggd~~~-----v~~~G~SaG~~~~~~~~~~ 196 (493)
T cd00312 157 QRLALKWVQDNIAAFGGDPDS-----VTIFGESAGGASVSLLLLS 196 (493)
T ss_pred HHHHHHHHHHHHHHhCCCcce-----EEEEeecHHHHHhhhHhhC
Confidence 466778888887666564333 3689999999998877654
No 74
>PRK04940 hypothetical protein; Provisional
Probab=53.22 E-value=32 Score=26.19 Aligned_cols=42 Identities=14% Similarity=0.190 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhh
Q 030813 25 IIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLT 69 (171)
Q Consensus 25 ~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~ 69 (171)
..+..+++.|++.+.+.... .. +...+++|+|.||.-|..++
T Consensus 37 ~~P~~a~~~l~~~i~~~~~~--~~-~~~~~liGSSLGGyyA~~La 78 (180)
T PRK04940 37 LHPKHDMQHLLKEVDKMLQL--SD-DERPLICGVGLGGYWAERIG 78 (180)
T ss_pred CCHHHHHHHHHHHHHHhhhc--cC-CCCcEEEEeChHHHHHHHHH
Confidence 34455566666554321110 00 13479999999999999776
No 75
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=52.21 E-value=23 Score=30.14 Aligned_cols=22 Identities=23% Similarity=0.356 Sum_probs=18.6
Q ss_pred CccceeeeCChHHHHHHHhhCC
Q 030813 50 DYFDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 50 ~~fD~i~GtS~Gaiia~~l~~~ 71 (171)
+.+..++|.|+||.+|..++..
T Consensus 160 ~~~~~vvG~SmGG~ial~~a~~ 181 (389)
T PRK06765 160 ARLHAVMGPSMGGMQAQEWAVH 181 (389)
T ss_pred CCceEEEEECHHHHHHHHHHHH
Confidence 4578899999999999988743
No 76
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=50.44 E-value=14 Score=31.86 Aligned_cols=44 Identities=18% Similarity=0.439 Sum_probs=33.5
Q ss_pred ChhhHH-HHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhh
Q 030813 21 GIRGII-PGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLT 69 (171)
Q Consensus 21 G~rG~~-~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~ 69 (171)
|--|+. ++.+|+.+.+++..+.|++.++ -+.|.|+||..+..+.
T Consensus 182 gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~V-----Tl~G~SAGa~sv~~~l 226 (535)
T PF00135_consen 182 GNYGLLDQRLALKWVQDNIAAFGGDPDNV-----TLFGQSAGAASVSLLL 226 (535)
T ss_dssp STHHHHHHHHHHHHHHHHGGGGTEEEEEE-----EEEEETHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhhhhcccCCcce-----eeeeecccccccceee
Confidence 555664 5889999999999888864332 4689999998888665
No 77
>PRK13604 luxD acyl transferase; Provisional
Probab=49.09 E-value=49 Score=27.40 Aligned_cols=52 Identities=17% Similarity=0.204 Sum_probs=31.8
Q ss_pred CCCceEEEEEe--CC-C-hhh----------HHH-HHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhC
Q 030813 8 EGKKITVLSID--GG-G-IRG----------IIP-GTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 8 ~~~~~~~LsLd--GG-G-~rG----------~~~-~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~ 70 (171)
.+.++.+|.+| || | ..| ..- ..+++++.++ + . .--.+.|.|.||.+|.+.+.
T Consensus 61 a~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~-----~----~--~~I~LiG~SmGgava~~~A~ 127 (307)
T PRK13604 61 SSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTR-----G----I--NNLGLIAASLSARIAYEVIN 127 (307)
T ss_pred HHCCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhc-----C----C--CceEEEEECHHHHHHHHHhc
Confidence 35678889998 43 4 223 222 3445555442 1 1 12578999999999876664
No 78
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=48.80 E-value=15 Score=26.37 Aligned_cols=17 Identities=29% Similarity=0.429 Sum_probs=14.9
Q ss_pred eeeeCChHHHHHHHhhC
Q 030813 54 VVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~ 70 (171)
+++|.|.||-+|.+++.
T Consensus 31 ~v~GHSlGg~lA~l~a~ 47 (153)
T cd00741 31 HVTGHSLGGALAGLAGL 47 (153)
T ss_pred EEEEcCHHHHHHHHHHH
Confidence 68999999999988774
No 79
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=48.25 E-value=42 Score=27.79 Aligned_cols=54 Identities=28% Similarity=0.257 Sum_probs=31.8
Q ss_pred eEEEEEeCCC-------hhhH-HHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCC
Q 030813 12 ITVLSIDGGG-------IRGI-IPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 12 ~~~LsLdGGG-------~rG~-~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~ 71 (171)
.+++++|=.| -+|. |++.....+.++.-.. ...+. =.+.|.|.|+++|..+|..
T Consensus 87 ~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~-----~~~~~-~~lvghS~Gg~va~~~Aa~ 148 (326)
T KOG1454|consen 87 LRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKE-----VFVEP-VSLVGHSLGGIVALKAAAY 148 (326)
T ss_pred eEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHh-----hcCcc-eEEEEeCcHHHHHHHHHHh
Confidence 8888888555 1222 5544444443333211 11122 4578999999999999865
No 80
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=47.60 E-value=30 Score=28.37 Aligned_cols=19 Identities=26% Similarity=0.345 Sum_probs=16.1
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
-.++|.|.||.+|..++..
T Consensus 140 ~~lvG~SmGG~vA~~~A~~ 158 (343)
T PRK08775 140 HAFVGYSYGALVGLQFASR 158 (343)
T ss_pred eEEEEECHHHHHHHHHHHH
Confidence 3589999999999988753
No 81
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=45.58 E-value=8.5 Score=15.19 Aligned_cols=8 Identities=50% Similarity=1.248 Sum_probs=5.4
Q ss_pred EEEeCCCh
Q 030813 15 LSIDGGGI 22 (171)
Q Consensus 15 LsLdGGG~ 22 (171)
.+|.|||+
T Consensus 2 f~l~GgGV 9 (10)
T PF08250_consen 2 FSLGGGGV 9 (10)
T ss_pred cccccCcC
Confidence 35778875
No 82
>PRK07581 hypothetical protein; Validated
Probab=45.36 E-value=29 Score=28.25 Aligned_cols=20 Identities=25% Similarity=0.237 Sum_probs=16.8
Q ss_pred cceeeeCChHHHHHHHhhCC
Q 030813 52 FDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 52 fD~i~GtS~Gaiia~~l~~~ 71 (171)
+-.++|.|.||.+|..++..
T Consensus 125 ~~~lvG~S~GG~va~~~a~~ 144 (339)
T PRK07581 125 LALVVGWSMGAQQTYHWAVR 144 (339)
T ss_pred eEEEEEeCHHHHHHHHHHHH
Confidence 34689999999999988854
No 83
>PRK11071 esterase YqiA; Provisional
Probab=45.11 E-value=75 Score=23.81 Aligned_cols=19 Identities=32% Similarity=0.352 Sum_probs=16.6
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
-.++|.|.||.+|..++..
T Consensus 63 ~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 63 LGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred eEEEEECHHHHHHHHHHHH
Confidence 5889999999999988854
No 84
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=44.82 E-value=17 Score=27.95 Aligned_cols=17 Identities=35% Similarity=0.714 Sum_probs=15.1
Q ss_pred eeeeCChHHHHHHHhhC
Q 030813 54 VVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~ 70 (171)
+++|.|.||-+|.+++.
T Consensus 131 ~vtGHSLGGaiA~l~a~ 147 (229)
T cd00519 131 IVTGHSLGGALASLLAL 147 (229)
T ss_pred EEEccCHHHHHHHHHHH
Confidence 69999999999998774
No 85
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=44.61 E-value=30 Score=29.17 Aligned_cols=20 Identities=20% Similarity=0.258 Sum_probs=16.8
Q ss_pred cceeeeCChHHHHHHHhhCC
Q 030813 52 FDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 52 fD~i~GtS~Gaiia~~l~~~ 71 (171)
.=.++|+|+||.+|++-+.-
T Consensus 176 ~~g~~G~SmGG~~A~laa~~ 195 (348)
T PF09752_consen 176 PLGLTGISMGGHMAALAASN 195 (348)
T ss_pred ceEEEEechhHhhHHhhhhc
Confidence 56799999999999987753
No 86
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=43.91 E-value=17 Score=26.83 Aligned_cols=18 Identities=22% Similarity=0.385 Sum_probs=14.9
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.+.|.|.||.+|+.++..
T Consensus 73 ~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQ 90 (251)
T ss_pred EEEEeccHHHHHHHHHHh
Confidence 456999999999988753
No 87
>COG1647 Esterase/lipase [General function prediction only]
Probab=43.66 E-value=17 Score=28.92 Aligned_cols=18 Identities=33% Similarity=0.460 Sum_probs=16.1
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.|+|.|+||+.++-|+..
T Consensus 88 ~v~GlSmGGv~alkla~~ 105 (243)
T COG1647 88 AVVGLSMGGVFALKLAYH 105 (243)
T ss_pred EEEeecchhHHHHHHHhh
Confidence 689999999999999864
No 88
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=43.49 E-value=33 Score=25.83 Aligned_cols=18 Identities=33% Similarity=0.403 Sum_probs=16.4
Q ss_pred cceeeeCChHHHHHHHhh
Q 030813 52 FDVVAGTSTGGLVTTMLT 69 (171)
Q Consensus 52 fD~i~GtS~Gaiia~~l~ 69 (171)
+=.++|.|.||++|.-+|
T Consensus 67 p~~L~G~S~Gg~lA~E~A 84 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMA 84 (229)
T ss_dssp SEEEEEETHHHHHHHHHH
T ss_pred CeeehccCccHHHHHHHH
Confidence 679999999999998877
No 89
>PRK10673 acyl-CoA esterase; Provisional
Probab=42.57 E-value=19 Score=27.52 Aligned_cols=18 Identities=39% Similarity=0.440 Sum_probs=15.3
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.+.|.|.||.+|..++..
T Consensus 84 ~lvGhS~Gg~va~~~a~~ 101 (255)
T PRK10673 84 TFIGHSMGGKAVMALTAL 101 (255)
T ss_pred EEEEECHHHHHHHHHHHh
Confidence 567999999999988754
No 90
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=42.43 E-value=44 Score=27.19 Aligned_cols=23 Identities=26% Similarity=0.338 Sum_probs=19.0
Q ss_pred CccceeeeCChHHHHHHHhhCCC
Q 030813 50 DYFDVVAGTSTGGLVTTMLTAPN 72 (171)
Q Consensus 50 ~~fD~i~GtS~Gaiia~~l~~~~ 72 (171)
...=++.|.|+||++++.++...
T Consensus 106 ~~p~~l~gHSmGg~Ia~~~~~~~ 128 (298)
T COG2267 106 GLPVFLLGHSMGGLIALLYLARY 128 (298)
T ss_pred CCCeEEEEeCcHHHHHHHHHHhC
Confidence 45678999999999999887553
No 91
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=42.40 E-value=19 Score=26.05 Aligned_cols=19 Identities=32% Similarity=0.576 Sum_probs=16.0
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
-.+.|.|.||.++..++..
T Consensus 68 ~~lvG~S~Gg~~a~~~a~~ 86 (228)
T PF12697_consen 68 VILVGHSMGGMIALRLAAR 86 (228)
T ss_dssp EEEEEETHHHHHHHHHHHH
T ss_pred ccccccccccccccccccc
Confidence 4678999999999988753
No 92
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=41.91 E-value=42 Score=29.45 Aligned_cols=46 Identities=20% Similarity=0.317 Sum_probs=34.3
Q ss_pred ChhhH-HHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCC
Q 030813 21 GIRGI-IPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 21 G~rG~-~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~ 71 (171)
|--|+ =++.+|+.+.+.++.+.|++.+ =-+.|+|+||..+.++..-
T Consensus 169 gN~gl~Dq~~AL~wv~~~I~~FGGdp~~-----vTl~G~saGa~~v~~l~~S 215 (545)
T KOG1516|consen 169 GNLGLFDQLLALRWVKDNIPSFGGDPKN-----VTLFGHSAGAASVSLLTLS 215 (545)
T ss_pred CcccHHHHHHHHHHHHHHHHhcCCCCCe-----EEEEeechhHHHHHHHhcC
Confidence 33454 3578899999999888886444 2467999999999888754
No 93
>PHA02857 monoglyceride lipase; Provisional
Probab=41.83 E-value=19 Score=28.08 Aligned_cols=18 Identities=17% Similarity=0.331 Sum_probs=15.2
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.+.|.|+||.+|..++..
T Consensus 100 ~lvG~S~GG~ia~~~a~~ 117 (276)
T PHA02857 100 FLLGHSMGATISILAAYK 117 (276)
T ss_pred EEEEcCchHHHHHHHHHh
Confidence 478999999999988743
No 94
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=41.15 E-value=38 Score=25.94 Aligned_cols=18 Identities=28% Similarity=0.329 Sum_probs=15.8
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.++|.|.||.+++.++..
T Consensus 98 ~lvG~S~Gg~~a~~~a~~ 115 (278)
T TIGR03056 98 GVIGHSAGAAIALRLALD 115 (278)
T ss_pred eEEEECccHHHHHHHHHh
Confidence 788999999999988754
No 95
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=41.03 E-value=18 Score=30.34 Aligned_cols=19 Identities=26% Similarity=0.480 Sum_probs=16.7
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
=.++|.|+||.+|..++..
T Consensus 168 v~l~GDSaGGNia~~va~r 186 (336)
T KOG1515|consen 168 VFLAGDSAGGNIAHVVAQR 186 (336)
T ss_pred EEEEccCccHHHHHHHHHH
Confidence 5899999999999998853
No 96
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=40.94 E-value=38 Score=27.38 Aligned_cols=18 Identities=22% Similarity=0.462 Sum_probs=15.6
Q ss_pred ceeeeCChHHHHHHHhhC
Q 030813 53 DVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~ 70 (171)
-.+.|.|+||.+++.++.
T Consensus 136 i~l~GhSmGG~ia~~~a~ 153 (330)
T PLN02298 136 RFLYGESMGGAICLLIHL 153 (330)
T ss_pred EEEEEecchhHHHHHHHh
Confidence 489999999999987764
No 97
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=40.55 E-value=20 Score=27.34 Aligned_cols=19 Identities=21% Similarity=0.268 Sum_probs=15.8
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
=.+.|.|.||.++..++..
T Consensus 98 ~~liG~S~Gg~ia~~~a~~ 116 (288)
T TIGR01250 98 FYLLGHSWGGMLAQEYALK 116 (288)
T ss_pred EEEEEeehHHHHHHHHHHh
Confidence 3677999999999988753
No 98
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=39.16 E-value=20 Score=27.46 Aligned_cols=15 Identities=40% Similarity=0.516 Sum_probs=13.3
Q ss_pred eeeeCChHHHHHHHh
Q 030813 54 VVAGTSTGGLVTTML 68 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l 68 (171)
.++|+|+||++..-.
T Consensus 116 v~~G~SAGA~~~~~~ 130 (210)
T cd03129 116 VIGGTSAGAAVMGET 130 (210)
T ss_pred eEEEcCHHHHHhhhc
Confidence 799999999998764
No 99
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=38.40 E-value=23 Score=26.76 Aligned_cols=20 Identities=20% Similarity=0.220 Sum_probs=16.5
Q ss_pred cceeeeCChHHHHHHHhhCC
Q 030813 52 FDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 52 fD~i~GtS~Gaiia~~l~~~ 71 (171)
--.+.|.|.||.+|..++..
T Consensus 67 ~~~lvG~S~Gg~va~~~a~~ 86 (242)
T PRK11126 67 PYWLVGYSLGGRIAMYYACQ 86 (242)
T ss_pred CeEEEEECHHHHHHHHHHHh
Confidence 34577999999999998764
No 100
>PRK10162 acetyl esterase; Provisional
Probab=38.11 E-value=23 Score=28.92 Aligned_cols=17 Identities=24% Similarity=0.319 Sum_probs=15.3
Q ss_pred eeeeCChHHHHHHHhhC
Q 030813 54 VVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~ 70 (171)
.++|.|+||.+|+.++.
T Consensus 157 ~l~G~SaGG~la~~~a~ 173 (318)
T PRK10162 157 GFAGDSAGAMLALASAL 173 (318)
T ss_pred EEEEECHHHHHHHHHHH
Confidence 89999999999998874
No 101
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=38.09 E-value=22 Score=27.69 Aligned_cols=19 Identities=32% Similarity=0.447 Sum_probs=15.3
Q ss_pred cceeeeCChHHHHHHHhhC
Q 030813 52 FDVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 52 fD~i~GtS~Gaiia~~l~~ 70 (171)
.=++.|.|+||++|-.+..
T Consensus 86 ~vilVgHSmGGlvar~~l~ 104 (225)
T PF07819_consen 86 SVILVGHSMGGLVARSALS 104 (225)
T ss_pred ceEEEEEchhhHHHHHHHh
Confidence 4468899999999987664
No 102
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=37.97 E-value=24 Score=26.52 Aligned_cols=17 Identities=24% Similarity=0.448 Sum_probs=15.5
Q ss_pred eeeeCChHHHHHHHhhC
Q 030813 54 VVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~ 70 (171)
.+.|.|.||.++++++.
T Consensus 67 ~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 67 GIMGHSYGGYLALLAAT 83 (213)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred EEEcccccccccchhhc
Confidence 78999999999998876
No 103
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=37.40 E-value=18 Score=28.80 Aligned_cols=14 Identities=36% Similarity=0.565 Sum_probs=12.0
Q ss_pred ceeeeCChHHHHHH
Q 030813 53 DVVAGTSTGGLVTT 66 (171)
Q Consensus 53 D~i~GtS~Gaiia~ 66 (171)
-.++|+|+||++..
T Consensus 117 ~vi~G~SAGA~i~~ 130 (250)
T TIGR02069 117 IILGGTSAGAAVMS 130 (250)
T ss_pred CeEEEccHHHHhcc
Confidence 47999999999875
No 104
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=36.65 E-value=26 Score=27.44 Aligned_cols=20 Identities=20% Similarity=0.330 Sum_probs=16.1
Q ss_pred ccceeeeCChHHHHHHHhhCC
Q 030813 51 YFDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 51 ~fD~i~GtS~Gaiia~~l~~~ 71 (171)
.+. ++|.|.||.+|+.++..
T Consensus 92 ~~~-LvG~S~GG~va~~~a~~ 111 (276)
T TIGR02240 92 QVN-AIGVSWGGALAQQFAHD 111 (276)
T ss_pred ceE-EEEECHHHHHHHHHHHH
Confidence 355 56999999999998854
No 105
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=36.63 E-value=69 Score=23.48 Aligned_cols=35 Identities=26% Similarity=0.268 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCC
Q 030813 27 PGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 27 ~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~ 71 (171)
.+..++.+.+.++ + +. =.+.|.|.||.+++.++.-
T Consensus 30 ~~~~~~~~~~~l~--------~-~~-~~~vG~S~Gg~~~~~~a~~ 64 (230)
T PF00561_consen 30 LAADLEALREALG--------I-KK-INLVGHSMGGMLALEYAAQ 64 (230)
T ss_dssp HHHHHHHHHHHHT--------T-SS-EEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC--------C-CC-eEEEEECCChHHHHHHHHH
Confidence 3445556655543 2 22 4678999999999988743
No 106
>PRK10566 esterase; Provisional
Probab=36.41 E-value=23 Score=27.11 Aligned_cols=18 Identities=33% Similarity=0.525 Sum_probs=15.8
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.+.|.|.||.+++.++..
T Consensus 110 ~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 110 AVGGASMGGMTALGIMAR 127 (249)
T ss_pred eEEeecccHHHHHHHHHh
Confidence 799999999999988753
No 107
>COG3150 Predicted esterase [General function prediction only]
Probab=36.34 E-value=56 Score=24.93 Aligned_cols=35 Identities=34% Similarity=0.405 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhh
Q 030813 28 GTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLT 69 (171)
Q Consensus 28 ~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~ 69 (171)
..+++.+|+.+.+..+ .--+|+|+|.||-.|.-++
T Consensus 43 ~~a~~ele~~i~~~~~-------~~p~ivGssLGGY~At~l~ 77 (191)
T COG3150 43 QQALKELEKAVQELGD-------ESPLIVGSSLGGYYATWLG 77 (191)
T ss_pred HHHHHHHHHHHHHcCC-------CCceEEeecchHHHHHHHH
Confidence 4456777776653222 2378999999999988775
No 108
>PLN02965 Probable pheophorbidase
Probab=36.31 E-value=24 Score=27.32 Aligned_cols=19 Identities=26% Similarity=0.277 Sum_probs=16.4
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
-.++|.|.||.++..++..
T Consensus 74 ~~lvGhSmGG~ia~~~a~~ 92 (255)
T PLN02965 74 VILVGHSIGGGSVTEALCK 92 (255)
T ss_pred EEEEecCcchHHHHHHHHh
Confidence 4889999999999988764
No 109
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=35.96 E-value=27 Score=26.18 Aligned_cols=17 Identities=29% Similarity=0.483 Sum_probs=15.0
Q ss_pred eeeeCChHHHHHHHhhC
Q 030813 54 VVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~ 70 (171)
.++|.|.||.+|..++.
T Consensus 83 ~l~G~S~Gg~~a~~~a~ 99 (257)
T TIGR03611 83 HFVGHALGGLIGLQLAL 99 (257)
T ss_pred EEEEechhHHHHHHHHH
Confidence 68999999999998874
No 110
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=35.86 E-value=56 Score=27.08 Aligned_cols=45 Identities=29% Similarity=0.254 Sum_probs=33.3
Q ss_pred hhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCC
Q 030813 23 RGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 23 rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~ 71 (171)
||+=.++.|.+|.+++....|. ...==+|+|-|.|+.++..|++.
T Consensus 120 ~g~ddVgflr~lva~l~~~~gi----dp~RVyvtGlS~GG~Ma~~lac~ 164 (312)
T COG3509 120 RGVDDVGFLRALVAKLVNEYGI----DPARVYVTGLSNGGRMANRLACE 164 (312)
T ss_pred CCccHHHHHHHHHHHHHHhcCc----CcceEEEEeeCcHHHHHHHHHhc
Confidence 6777889999999887643332 11123899999999999988864
No 111
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=35.76 E-value=29 Score=23.80 Aligned_cols=19 Identities=32% Similarity=0.459 Sum_probs=16.1
Q ss_pred cceeeeCChHHHHHHHhhC
Q 030813 52 FDVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 52 fD~i~GtS~Gaiia~~l~~ 70 (171)
-=.+.|.|.||.+++.++.
T Consensus 62 ~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 62 RIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp EEEEEEETHHHHHHHHHHH
T ss_pred cEEEEEEccCcHHHHHHhh
Confidence 3478999999999998875
No 112
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=35.70 E-value=26 Score=25.87 Aligned_cols=18 Identities=44% Similarity=0.624 Sum_probs=15.2
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.+.|.|.||.++..++..
T Consensus 82 ~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 82 VFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred EEEEeCchHHHHHHHHHH
Confidence 578999999999988754
No 113
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=33.95 E-value=28 Score=27.67 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=16.4
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
-.++|.|+||.+|+.++..
T Consensus 140 ~~~~G~S~GG~~a~~~a~~ 158 (275)
T TIGR02821 140 QGITGHSMGGHGALVIALK 158 (275)
T ss_pred eEEEEEChhHHHHHHHHHh
Confidence 3799999999999988754
No 114
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=33.92 E-value=26 Score=27.18 Aligned_cols=16 Identities=38% Similarity=0.457 Sum_probs=13.1
Q ss_pred ceeeeCChHHHHHHHh
Q 030813 53 DVVAGTSTGGLVTTML 68 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l 68 (171)
-.++|+|+||++..-.
T Consensus 118 ~v~~G~SAGA~i~~~~ 133 (217)
T cd03145 118 VVIGGTSAGAAVMSDT 133 (217)
T ss_pred CEEEEccHHHHhhhhc
Confidence 3689999999997644
No 115
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=33.45 E-value=59 Score=24.55 Aligned_cols=19 Identities=37% Similarity=0.469 Sum_probs=15.9
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
=.++|.|.||.++..++..
T Consensus 97 i~l~G~S~Gg~~a~~~a~~ 115 (212)
T TIGR01840 97 VYVTGLSAGGGMTAVLGCT 115 (212)
T ss_pred eEEEEECHHHHHHHHHHHh
Confidence 3699999999999888753
No 116
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=32.96 E-value=1.1e+02 Score=26.10 Aligned_cols=18 Identities=22% Similarity=0.121 Sum_probs=15.7
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.+.|.|.||.+|+.++..
T Consensus 268 ~l~G~S~GG~~Al~~A~~ 285 (414)
T PRK05077 268 AAFGFRFGANVAVRLAYL 285 (414)
T ss_pred EEEEEChHHHHHHHHHHh
Confidence 689999999999988753
No 117
>PRK10749 lysophospholipase L2; Provisional
Probab=32.94 E-value=31 Score=28.15 Aligned_cols=17 Identities=24% Similarity=0.378 Sum_probs=14.2
Q ss_pred eeeeCChHHHHHHHhhC
Q 030813 54 VVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~ 70 (171)
.+.|.|+||.+++.++.
T Consensus 134 ~l~GhSmGG~ia~~~a~ 150 (330)
T PRK10749 134 YALAHSMGGAILTLFLQ 150 (330)
T ss_pred EEEEEcHHHHHHHHHHH
Confidence 56799999999987664
No 118
>PLN02408 phospholipase A1
Probab=32.76 E-value=90 Score=26.53 Aligned_cols=17 Identities=24% Similarity=0.425 Sum_probs=15.1
Q ss_pred eeeeCChHHHHHHHhhC
Q 030813 54 VVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~ 70 (171)
.|+|.|.||-+|.+.+.
T Consensus 203 ~vTGHSLGGALAtLaA~ 219 (365)
T PLN02408 203 TITGHSLGAALATLTAY 219 (365)
T ss_pred EEeccchHHHHHHHHHH
Confidence 79999999999998774
No 119
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=32.60 E-value=29 Score=28.50 Aligned_cols=19 Identities=26% Similarity=0.375 Sum_probs=16.0
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
=.++|.|+||.+|+.++..
T Consensus 164 ~~LvGhSmGG~val~~a~~ 182 (349)
T PLN02385 164 SFLFGQSMGGAVALKVHLK 182 (349)
T ss_pred EEEEEeccchHHHHHHHHh
Confidence 3788999999999988743
No 120
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=32.40 E-value=34 Score=25.17 Aligned_cols=18 Identities=39% Similarity=0.508 Sum_probs=15.0
Q ss_pred ceeeeCChHHHHHHHhhC
Q 030813 53 DVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~ 70 (171)
-.+.|.|.||.++..++.
T Consensus 67 ~~lvG~S~Gg~~a~~~a~ 84 (245)
T TIGR01738 67 AIWLGWSLGGLVALHIAA 84 (245)
T ss_pred eEEEEEcHHHHHHHHHHH
Confidence 357899999999987764
No 121
>PRK03592 haloalkane dehalogenase; Provisional
Probab=32.26 E-value=33 Score=27.13 Aligned_cols=19 Identities=21% Similarity=0.150 Sum_probs=15.9
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
=.++|.|.||.+|..++..
T Consensus 95 ~~lvGhS~Gg~ia~~~a~~ 113 (295)
T PRK03592 95 VVLVGHDWGSALGFDWAAR 113 (295)
T ss_pred eEEEEECHHHHHHHHHHHh
Confidence 4677999999999988754
No 122
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=32.21 E-value=34 Score=27.00 Aligned_cols=18 Identities=28% Similarity=0.320 Sum_probs=15.4
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.+.|.|.||.+|+.++..
T Consensus 105 ~lvGhS~Gg~va~~~a~~ 122 (294)
T PLN02824 105 FVICNSVGGVVGLQAAVD 122 (294)
T ss_pred EEEEeCHHHHHHHHHHHh
Confidence 578999999999988753
No 123
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=31.82 E-value=1.1e+02 Score=24.78 Aligned_cols=18 Identities=39% Similarity=0.499 Sum_probs=15.5
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.+.|.|.||.+|..++..
T Consensus 200 ~lvG~S~Gg~~a~~~a~~ 217 (371)
T PRK14875 200 HLVGHSMGGAVALRLAAR 217 (371)
T ss_pred EEEeechHHHHHHHHHHh
Confidence 788999999999987753
No 124
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=31.61 E-value=1e+02 Score=32.97 Aligned_cols=19 Identities=32% Similarity=0.303 Sum_probs=16.6
Q ss_pred ccceeeeCChHHHHHHHhh
Q 030813 51 YFDVVAGTSTGGLVTTMLT 69 (171)
Q Consensus 51 ~fD~i~GtS~Gaiia~~l~ 69 (171)
.+|.++|+|.|-+.|+..+
T Consensus 674 ~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 674 KADMTAGHSFGELSALCAA 692 (2582)
T ss_pred ccceeecCCHHHHHHHHHh
Confidence 5899999999998887765
No 125
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=30.83 E-value=33 Score=26.64 Aligned_cols=18 Identities=22% Similarity=0.346 Sum_probs=15.6
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.+.|.|.||.++..++..
T Consensus 104 ~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 104 HLVGNSMGGATALNFALE 121 (282)
T ss_pred eEEEECchHHHHHHHHHh
Confidence 679999999999988753
No 126
>PRK00870 haloalkane dehalogenase; Provisional
Probab=30.53 E-value=36 Score=27.04 Aligned_cols=18 Identities=28% Similarity=0.364 Sum_probs=15.2
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.+.|.|.||.+|..++..
T Consensus 118 ~lvGhS~Gg~ia~~~a~~ 135 (302)
T PRK00870 118 TLVCQDWGGLIGLRLAAE 135 (302)
T ss_pred EEEEEChHHHHHHHHHHh
Confidence 577999999999988753
No 127
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=29.32 E-value=40 Score=27.02 Aligned_cols=17 Identities=24% Similarity=0.268 Sum_probs=15.0
Q ss_pred eeeeCChHHHHHHHhhC
Q 030813 54 VVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~ 70 (171)
.++|.|.||.+++.++.
T Consensus 98 ~lvG~S~GG~ia~~~a~ 114 (306)
T TIGR01249 98 LVFGGSWGSTLALAYAQ 114 (306)
T ss_pred EEEEECHHHHHHHHHHH
Confidence 68899999999998874
No 128
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=29.15 E-value=75 Score=25.76 Aligned_cols=51 Identities=24% Similarity=0.277 Sum_probs=29.0
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhC
Q 030813 15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~ 70 (171)
.-..|||.....+ .|++++.-......++...-..|-|.|.||++++-...
T Consensus 106 ~~~~gGg~~~f~~-----fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL 156 (264)
T COG2819 106 FYQFGGGGDAFRE-----FLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALL 156 (264)
T ss_pred CCCCCCChHHHHH-----HHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHh
Confidence 4566888776544 22222211000113444445899999999999985443
No 129
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=29.06 E-value=2.6e+02 Score=23.95 Aligned_cols=19 Identities=42% Similarity=0.485 Sum_probs=16.2
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
-.|+|.|.||+.|+.++..
T Consensus 290 ~~IaG~S~GGl~AL~~al~ 308 (411)
T PRK10439 290 TVVAGQSFGGLAALYAGLH 308 (411)
T ss_pred eEEEEEChHHHHHHHHHHh
Confidence 3799999999999987754
No 130
>PRK10985 putative hydrolase; Provisional
Probab=28.23 E-value=68 Score=26.04 Aligned_cols=17 Identities=29% Similarity=0.370 Sum_probs=13.7
Q ss_pred ceeeeCChHHHHHHHhh
Q 030813 53 DVVAGTSTGGLVTTMLT 69 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~ 69 (171)
=+++|.|+||.+++.++
T Consensus 133 ~~~vG~S~GG~i~~~~~ 149 (324)
T PRK10985 133 TAAVGYSLGGNMLACLL 149 (324)
T ss_pred EEEEEecchHHHHHHHH
Confidence 48999999998766554
No 131
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=27.91 E-value=1.1e+02 Score=27.21 Aligned_cols=39 Identities=18% Similarity=0.286 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhC
Q 030813 27 PGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 27 ~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~ 70 (171)
++.+|+...+++..+.|++.. + -+.|-|+||...+.|..
T Consensus 161 qilALkWV~~NIe~FGGDp~N----V-Tl~GeSAGa~si~~Lla 199 (491)
T COG2272 161 QILALKWVRDNIEAFGGDPQN----V-TLFGESAGAASILTLLA 199 (491)
T ss_pred HHHHHHHHHHHHHHhCCCccc----e-EEeeccchHHHHHHhhc
Confidence 578899999998888886433 2 46799999887775543
No 132
>PLN02571 triacylglycerol lipase
Probab=27.84 E-value=1.2e+02 Score=26.16 Aligned_cols=17 Identities=24% Similarity=0.434 Sum_probs=14.8
Q ss_pred eeeeCChHHHHHHHhhC
Q 030813 54 VVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~ 70 (171)
.|+|+|.||-+|.+.+.
T Consensus 229 ~VTGHSLGGALAtLaA~ 245 (413)
T PLN02571 229 TICGHSLGAALATLNAV 245 (413)
T ss_pred EEeccchHHHHHHHHHH
Confidence 79999999999988663
No 133
>PRK10349 carboxylesterase BioH; Provisional
Probab=27.81 E-value=45 Score=25.62 Aligned_cols=21 Identities=33% Similarity=0.330 Sum_probs=16.8
Q ss_pred CccceeeeCChHHHHHHHhhCC
Q 030813 50 DYFDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 50 ~~fD~i~GtS~Gaiia~~l~~~ 71 (171)
+.+. ++|.|.||.+|..++..
T Consensus 74 ~~~~-lvGhS~Gg~ia~~~a~~ 94 (256)
T PRK10349 74 DKAI-WLGWSLGGLVASQIALT 94 (256)
T ss_pred CCeE-EEEECHHHHHHHHHHHh
Confidence 4564 57999999999988753
No 134
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=25.89 E-value=1.2e+02 Score=27.17 Aligned_cols=21 Identities=19% Similarity=-0.046 Sum_probs=18.3
Q ss_pred CccceeeeCChHHHHHHHhhC
Q 030813 50 DYFDVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 50 ~~fD~i~GtS~Gaiia~~l~~ 70 (171)
..+|.++|.|.|-+.|+..+.
T Consensus 264 I~Pdav~GHSlGE~aAa~aAG 284 (538)
T TIGR02816 264 IKPDFALGYSKGEASMWASLG 284 (538)
T ss_pred CCCCEEeecCHHHHHHHHHhC
Confidence 468999999999999988774
No 135
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=25.87 E-value=49 Score=26.06 Aligned_cols=42 Identities=14% Similarity=0.356 Sum_probs=24.2
Q ss_pred EEEEeCCChhhHH----HHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHH
Q 030813 14 VLSIDGGGIRGII----PGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTT 66 (171)
Q Consensus 14 ~LsLdGGG~rG~~----~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~ 66 (171)
++...||=.+-+. ..|.++-|.++.+. | -...|.|+||+++.
T Consensus 87 ~IyVgGGNTF~LL~~lke~gld~iIr~~vk~--G---------~~YiG~SAGA~ia~ 132 (224)
T COG3340 87 IIYVGGGNTFNLLQELKETGLDDIIRERVKA--G---------TPYIGWSAGANIAG 132 (224)
T ss_pred EEEECCchHHHHHHHHHHhCcHHHHHHHHHc--C---------CceEEeccCceeec
Confidence 4555555554332 23444455554431 3 35789999999974
No 136
>PRK11460 putative hydrolase; Provisional
Probab=25.73 E-value=1.2e+02 Score=23.48 Aligned_cols=19 Identities=16% Similarity=0.268 Sum_probs=16.1
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
=.++|-|.||.+++.++..
T Consensus 105 i~l~GfS~Gg~~al~~a~~ 123 (232)
T PRK11460 105 TALIGFSQGAIMALEAVKA 123 (232)
T ss_pred EEEEEECHHHHHHHHHHHh
Confidence 4799999999999987743
No 137
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=25.58 E-value=39 Score=27.74 Aligned_cols=18 Identities=28% Similarity=0.277 Sum_probs=15.3
Q ss_pred cceeeeCChHHHHHHHhh
Q 030813 52 FDVVAGTSTGGLVTTMLT 69 (171)
Q Consensus 52 fD~i~GtS~Gaiia~~l~ 69 (171)
+=++.|.|+||.++..++
T Consensus 143 p~~l~GhSmGg~i~~~~~ 160 (332)
T TIGR01607 143 PMYIIGLSMGGNIALRLL 160 (332)
T ss_pred ceeEeeccCccHHHHHHH
Confidence 458999999999998765
No 138
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=25.33 E-value=48 Score=26.29 Aligned_cols=18 Identities=33% Similarity=0.525 Sum_probs=15.2
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.++|.|.||+++..++..
T Consensus 90 ~lvGhS~GG~v~~~~a~~ 107 (273)
T PLN02211 90 ILVGHSAGGLSVTQAIHR 107 (273)
T ss_pred EEEEECchHHHHHHHHHh
Confidence 588999999999887753
No 139
>cd04059 Peptidases_S8_Protein_convertases_Kexins_Furin-like Peptidase S8 family domain in Protein convertases. Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.
Probab=25.25 E-value=80 Score=25.13 Aligned_cols=42 Identities=17% Similarity=0.174 Sum_probs=26.3
Q ss_pred CccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhh
Q 030813 50 DYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEH 91 (171)
Q Consensus 50 ~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~ 91 (171)
......+|||+-+=+.+.++.--.+..|.++++|+.++..+.
T Consensus 254 ~~~~~~sGTS~AaP~VAG~aAll~~~~p~lt~~~v~~~L~~T 295 (297)
T cd04059 254 NCTSSHNGTSAAAPLAAGVIALMLEANPNLTWRDVQHILALT 295 (297)
T ss_pred CcccccCCcchhhhhhHhHHHHhhccCCCCCHHHHHHHHHHh
Confidence 345678999998644443332222345678899998876543
No 140
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=25.04 E-value=52 Score=26.43 Aligned_cols=19 Identities=21% Similarity=0.265 Sum_probs=16.0
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
=.+.|.|+||.++..++..
T Consensus 101 v~LvG~SmGG~vAl~~A~~ 119 (266)
T TIGR03101 101 VTLWGLRLGALLALDAANP 119 (266)
T ss_pred EEEEEECHHHHHHHHHHHh
Confidence 3789999999999988743
No 141
>PLN02578 hydrolase
Probab=24.97 E-value=52 Score=27.11 Aligned_cols=19 Identities=26% Similarity=0.420 Sum_probs=15.9
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
-.+.|.|.||.+|..++..
T Consensus 154 ~~lvG~S~Gg~ia~~~A~~ 172 (354)
T PLN02578 154 AVLVGNSLGGFTALSTAVG 172 (354)
T ss_pred eEEEEECHHHHHHHHHHHh
Confidence 3678999999999988753
No 142
>TIGR02530 flg_new flagellar operon protein. Members of this family are found in a subset of bacterial flagellar operons, generally between genes designated flgD and flgE, in species as diverse as Bacillus halodurans and various other Firmicutes, Geobacter sulfurreducens, and Bdellovibrio bacteriovorus. The specific molecular function is unknown.
Probab=24.90 E-value=52 Score=22.45 Aligned_cols=24 Identities=25% Similarity=0.335 Sum_probs=20.9
Q ss_pred CCceEEEeeeCCCCCeEEeeCCCc
Q 030813 143 LTNVVIPTFDIKLLQPVIFSTTDV 166 (171)
Q Consensus 143 ~~~~~i~a~di~~~~~~~f~~~~~ 166 (171)
+-+.+|||.|-...+-.+|+|.+.
T Consensus 69 ~NrTVITAmd~~~~k~nVFTNIDs 92 (96)
T TIGR02530 69 KNRTVITAMDKDELKNNVFTNIDG 92 (96)
T ss_pred CCCeEEEEeCchhhcCCcEecccc
Confidence 468999999998888999999875
No 143
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=24.74 E-value=52 Score=27.95 Aligned_cols=18 Identities=33% Similarity=0.383 Sum_probs=15.3
Q ss_pred ceeeeCChHHHHHHHhhC
Q 030813 53 DVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~ 70 (171)
=.+.|.|+||++++.++.
T Consensus 210 i~lvGhSmGG~ial~~a~ 227 (395)
T PLN02652 210 CFLFGHSTGGAVVLKAAS 227 (395)
T ss_pred EEEEEECHHHHHHHHHHh
Confidence 378899999999987764
No 144
>cd04852 Peptidases_S8_3 Peptidase S8 family domain, uncharacterized subfamily 3. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=24.23 E-value=46 Score=26.90 Aligned_cols=41 Identities=20% Similarity=0.208 Sum_probs=26.4
Q ss_pred CccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHh
Q 030813 50 DYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLE 90 (171)
Q Consensus 50 ~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (171)
..+..++|||.-+=+.+.++.--.+..|.+++++++++..+
T Consensus 264 ~~~~~~sGTS~AaP~vaG~aALl~~~~p~~t~~~v~~~L~~ 304 (307)
T cd04852 264 EDFAFISGTSMASPHVAGVAALLKSAHPDWSPAAIKSALMT 304 (307)
T ss_pred CcEEEeCcHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 45778899999865544333221223567899999887654
No 145
>PLN02324 triacylglycerol lipase
Probab=24.00 E-value=1.6e+02 Score=25.55 Aligned_cols=17 Identities=24% Similarity=0.464 Sum_probs=14.5
Q ss_pred eeeeCChHHHHHHHhhC
Q 030813 54 VVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~ 70 (171)
.|.|+|.||-+|.+.+.
T Consensus 218 tvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 218 TFTGHSLGAVMSVLSAA 234 (415)
T ss_pred EEecCcHHHHHHHHHHH
Confidence 58999999999988763
No 146
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=23.85 E-value=55 Score=27.73 Aligned_cols=18 Identities=28% Similarity=0.467 Sum_probs=15.2
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.+.|.|.||.+|+.++..
T Consensus 179 ~lvGhS~GG~la~~~a~~ 196 (402)
T PLN02894 179 ILLGHSFGGYVAAKYALK 196 (402)
T ss_pred EEEEECHHHHHHHHHHHh
Confidence 478999999999987744
No 147
>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=23.77 E-value=48 Score=29.65 Aligned_cols=40 Identities=28% Similarity=0.412 Sum_probs=26.4
Q ss_pred EEEeCCChhhHHHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHH
Q 030813 15 LSIDGGGIRGIIPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGG 62 (171)
Q Consensus 15 LsLdGGG~rG~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Ga 62 (171)
|.+-|||+-|+ |+...+--+ |-.+-+.+.-|+-+|||.-+
T Consensus 15 viVIGGGitG~---GiArDaA~R-----Gl~v~LvE~~D~AsGTSsrs 54 (532)
T COG0578 15 VIVIGGGITGA---GIARDAAGR-----GLKVALVEKGDLASGTSSRS 54 (532)
T ss_pred EEEECCchhhH---HHHHHHHhC-----CCeEEEEecCcccCcccCcc
Confidence 45558888885 334333322 54556788999999999753
No 148
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.49 E-value=53 Score=30.95 Aligned_cols=19 Identities=26% Similarity=0.436 Sum_probs=15.9
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
-++.|+|+|||+|-+....
T Consensus 184 VILVGHSMGGiVAra~~tl 202 (973)
T KOG3724|consen 184 VILVGHSMGGIVARATLTL 202 (973)
T ss_pred EEEEeccchhHHHHHHHhh
Confidence 4789999999999887654
No 149
>COG4065 Uncharacterized protein conserved in archaea [Function unknown]
Probab=23.15 E-value=73 Score=26.83 Aligned_cols=27 Identities=7% Similarity=0.186 Sum_probs=21.7
Q ss_pred CccccCCceEEEeeeCCCCCeEEeeCC
Q 030813 138 TVKETLTNVVIPTFDIKLLQPVIFSTT 164 (171)
Q Consensus 138 ~l~d~~~~~~i~a~di~~~~~~~f~~~ 164 (171)
.+....+++++||||+++++..+.+..
T Consensus 40 ElGNTTTKcIlTATnl~tgrTyli~K~ 66 (480)
T COG4065 40 ELGNTTTKCILTATNLDTGRTYLINKI 66 (480)
T ss_pred EecCceeeEEEEeeccCCcceEEeeee
Confidence 345567899999999999998887653
No 150
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=22.89 E-value=61 Score=25.67 Aligned_cols=18 Identities=11% Similarity=0.143 Sum_probs=14.9
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.+.|.|+||++++.++..
T Consensus 103 ~l~G~S~Gg~~a~~~a~~ 120 (274)
T TIGR03100 103 VAWGLCDAASAALLYAPA 120 (274)
T ss_pred EEEEECHHHHHHHHHhhh
Confidence 567999999999988743
No 151
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=22.86 E-value=1.2e+02 Score=25.78 Aligned_cols=21 Identities=24% Similarity=0.346 Sum_probs=17.7
Q ss_pred CccceeeeCChHHHHHHHhhC
Q 030813 50 DYFDVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 50 ~~fD~i~GtS~Gaiia~~l~~ 70 (171)
...-.|.|.|+||+.|.-.+.
T Consensus 146 ~~l~avvGgSmGGMqaleWa~ 166 (368)
T COG2021 146 KKLAAVVGGSMGGMQALEWAI 166 (368)
T ss_pred ceEeeeeccChHHHHHHHHHH
Confidence 457889999999999997764
No 152
>PLN02442 S-formylglutathione hydrolase
Probab=22.86 E-value=56 Score=26.13 Aligned_cols=19 Identities=21% Similarity=0.233 Sum_probs=16.0
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
-.|+|.|+||..|+.++..
T Consensus 145 ~~i~G~S~GG~~a~~~a~~ 163 (283)
T PLN02442 145 ASIFGHSMGGHGALTIYLK 163 (283)
T ss_pred eEEEEEChhHHHHHHHHHh
Confidence 3799999999999887753
No 153
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=22.83 E-value=64 Score=25.83 Aligned_cols=18 Identities=22% Similarity=0.230 Sum_probs=15.1
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.++|.|.||.+|..++..
T Consensus 115 ~lIGhSlGa~vAg~~a~~ 132 (275)
T cd00707 115 HLIGHSLGAHVAGFAGKR 132 (275)
T ss_pred EEEEecHHHHHHHHHHHH
Confidence 478999999999888743
No 154
>PLN02847 triacylglycerol lipase
Probab=22.61 E-value=61 Score=29.50 Aligned_cols=17 Identities=35% Similarity=0.507 Sum_probs=14.6
Q ss_pred eeeeCChHHHHHHHhhC
Q 030813 54 VVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~ 70 (171)
+|+|+|.||-+|++++.
T Consensus 254 VITGHSLGGGVAALLAi 270 (633)
T PLN02847 254 KIVGHSLGGGTAALLTY 270 (633)
T ss_pred EEeccChHHHHHHHHHH
Confidence 48999999999998764
No 155
>PLN02802 triacylglycerol lipase
Probab=21.90 E-value=1.4e+02 Score=26.67 Aligned_cols=17 Identities=24% Similarity=0.454 Sum_probs=14.7
Q ss_pred eeeeCChHHHHHHHhhC
Q 030813 54 VVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~ 70 (171)
.|+|.|.||-+|.+.+.
T Consensus 333 ~VTGHSLGGALAtLaA~ 349 (509)
T PLN02802 333 TVTGHSLGAALALLVAD 349 (509)
T ss_pred EEeccchHHHHHHHHHH
Confidence 69999999999988763
No 156
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=21.32 E-value=1.3e+02 Score=26.19 Aligned_cols=18 Identities=22% Similarity=0.364 Sum_probs=14.7
Q ss_pred ceeeeCChHHHHHHHhhC
Q 030813 53 DVVAGTSTGGLVTTMLTA 70 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~ 70 (171)
=.+.|.|+||+++..++.
T Consensus 164 V~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 164 VNIISHSMGGLLVKCFMS 181 (440)
T ss_pred EEEEEECHhHHHHHHHHH
Confidence 357899999999997664
No 157
>PLN00021 chlorophyllase
Probab=21.10 E-value=59 Score=26.73 Aligned_cols=18 Identities=33% Similarity=0.431 Sum_probs=16.4
Q ss_pred eeeeCChHHHHHHHhhCC
Q 030813 54 VVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~~~ 71 (171)
.+.|.|.||.+|..++..
T Consensus 129 ~l~GHS~GG~iA~~lA~~ 146 (313)
T PLN00021 129 ALAGHSRGGKTAFALALG 146 (313)
T ss_pred EEEEECcchHHHHHHHhh
Confidence 789999999999999865
No 158
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=21.02 E-value=1.3e+02 Score=24.36 Aligned_cols=45 Identities=22% Similarity=0.251 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCCcCCccce----eeeCChHHHHHHHhhCCC
Q 030813 24 GIIPGTILAFLESKLQELDGPSARIADYFDV----VAGTSTGGLVTTMLTAPN 72 (171)
Q Consensus 24 G~~~~gvL~~L~~~~~~~~g~~~~i~~~fD~----i~GtS~Gaiia~~l~~~~ 72 (171)
--....+++++++.+..... ..-.+|+ ++|+|-|+=+|..++.++
T Consensus 64 ~~~~~~vi~Wl~~~L~~~l~----~~v~~D~s~l~l~GHSrGGk~Af~~al~~ 112 (259)
T PF12740_consen 64 VASAAEVIDWLAKGLESKLP----LGVKPDFSKLALAGHSRGGKVAFAMALGN 112 (259)
T ss_pred HHHHHHHHHHHHhcchhhcc----ccccccccceEEeeeCCCCHHHHHHHhhh
Confidence 33456777777776543222 1112344 899999999999888774
No 159
>KOG1068 consensus Exosomal 3'-5' exoribonuclease complex, subunit Rrp41 and related exoribonucleases [Translation, ribosomal structure and biogenesis]
Probab=21.00 E-value=1.1e+02 Score=24.44 Aligned_cols=44 Identities=20% Similarity=0.369 Sum_probs=26.8
Q ss_pred CCCCCceEEEEEeCCChhhHHHHHHHH---HHHHHhhhcCCCCCCcCCccceeeeCChH
Q 030813 6 SAEGKKITVLSIDGGGIRGIIPGTILA---FLESKLQELDGPSARIADYFDVVAGTSTG 61 (171)
Q Consensus 6 ~~~~~~~~~LsLdGGG~rG~~~~gvL~---~L~~~~~~~~g~~~~i~~~fD~i~GtS~G 61 (171)
|-.+--+.+++|+.+| +.....+=. +|-+. | + ..+|+|+|+|+|
T Consensus 117 PrsqIDI~v~VleddG--~~laa~inaatlAL~da-----G--I---~m~D~i~~~t~~ 163 (245)
T KOG1068|consen 117 PRSQIDIYVQVLEDDG--SNLAAAINAATLALADA-----G--I---PMYDLITACTAG 163 (245)
T ss_pred ccccceEEEEEEECCC--ccHHHHHHHHHHHHHHc-----C--C---Chhhhhhhceee
Confidence 4455568889998877 333322211 44443 3 2 368999999987
No 160
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=20.92 E-value=2e+02 Score=22.49 Aligned_cols=38 Identities=24% Similarity=0.291 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCC
Q 030813 26 IPGTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 26 ~~~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~ 71 (171)
.+..+++.+++...+. ... =.++|+|-||.+|...+..
T Consensus 67 ~q~~A~~yl~~~~~~~-------~~~-i~v~GHSkGGnLA~yaa~~ 104 (224)
T PF11187_consen 67 QQKSALAYLKKIAKKY-------PGK-IYVTGHSKGGNLAQYAAAN 104 (224)
T ss_pred HHHHHHHHHHHHHHhC-------CCC-EEEEEechhhHHHHHHHHH
Confidence 3455666777665431 112 4789999999999877643
No 161
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=20.64 E-value=1.2e+02 Score=23.60 Aligned_cols=35 Identities=20% Similarity=0.242 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhhhcCCCCCCcCCccceeeeCChHHHHHHHhhCC
Q 030813 28 GTILAFLESKLQELDGPSARIADYFDVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 28 ~gvL~~L~~~~~~~~g~~~~i~~~fD~i~GtS~Gaiia~~l~~~ 71 (171)
..+|+++.++.+ ...--+++|-|-||-||..++..
T Consensus 89 ~aaldW~~~~hp---------~s~~~~l~GfSFGa~Ia~~la~r 123 (210)
T COG2945 89 AAALDWLQARHP---------DSASCWLAGFSFGAYIAMQLAMR 123 (210)
T ss_pred HHHHHHHHhhCC---------CchhhhhcccchHHHHHHHHHHh
Confidence 567778877632 12335899999999999998854
No 162
>PF03283 PAE: Pectinacetylesterase
Probab=20.62 E-value=72 Score=26.95 Aligned_cols=16 Identities=31% Similarity=0.594 Sum_probs=13.6
Q ss_pred eeeeCChHHHHHHHhh
Q 030813 54 VVAGTSTGGLVTTMLT 69 (171)
Q Consensus 54 ~i~GtS~Gaiia~~l~ 69 (171)
+++|+||||+=+.+.+
T Consensus 159 lltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 159 LLTGCSAGGLGAILHA 174 (361)
T ss_pred EEeccChHHHHHHHHH
Confidence 8899999999887654
No 163
>cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid
Probab=20.44 E-value=83 Score=24.52 Aligned_cols=43 Identities=16% Similarity=0.225 Sum_probs=26.4
Q ss_pred ccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhCCc
Q 030813 51 YFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPK 94 (171)
Q Consensus 51 ~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (171)
.+....|||..+=+.+.++.-.....| ++.+++.+...+.+++
T Consensus 216 ~~~~~~GTS~Aap~vag~~Al~~~~~p-~t~~~i~~~L~~tA~~ 258 (260)
T cd07484 216 DYAYMSGTSMATPHVAGVAALLYSQGP-LSASEVRDALKKTADD 258 (260)
T ss_pred CEEEeeeHHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHhCcc
Confidence 456789999886544433322112346 7889988877665543
No 164
>cd04077 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 family domain in ProteinaseK-like proteins. The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding moti
Probab=20.21 E-value=83 Score=24.46 Aligned_cols=43 Identities=19% Similarity=0.137 Sum_probs=25.5
Q ss_pred CccceeeeCChHHHHHHHhhCCCCCCCCccCHHHHHHHHHhhC
Q 030813 50 DYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHG 92 (171)
Q Consensus 50 ~~fD~i~GtS~Gaiia~~l~~~~~~~~~~~~~~~~~~~~~~~~ 92 (171)
..+..+.|||.-+=+.+.++.--....|.++++++.++..+.+
T Consensus 211 ~~~~~~~GTS~Aap~vaG~~All~~~~p~~~~~~v~~~L~~tA 253 (255)
T cd04077 211 TATATLSGTSMAAPHVAGLAAYLLSLGPDLSPAEVKARLLNLA 253 (255)
T ss_pred CcEEeeCcHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhc
Confidence 3566788999875444433322112235578888888766544
No 165
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=20.12 E-value=72 Score=27.06 Aligned_cols=19 Identities=21% Similarity=0.385 Sum_probs=16.4
Q ss_pred ceeeeCChHHHHHHHhhCC
Q 030813 53 DVVAGTSTGGLVTTMLTAP 71 (171)
Q Consensus 53 D~i~GtS~Gaiia~~l~~~ 71 (171)
=.+.|+|.||-+|+.||..
T Consensus 162 milvGHSfGGYLaa~YAlK 180 (365)
T KOG4409|consen 162 MILVGHSFGGYLAAKYALK 180 (365)
T ss_pred eeEeeccchHHHHHHHHHh
Confidence 3678999999999999864
Done!