BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030819
(171 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 94/104 (90%), Gaps = 2/104 (1%)
Query: 59 FPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
F +ACLP SP+ S PKTRL+VSGLSFRT+E+SLRNAF+ FGQLVEVNLVMDKIANRP
Sbjct: 62 FAVACLPSSPNQPSI--PKTRLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRP 119
Query: 119 RGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQ 162
RGFAFLRY+TEEES +AIEGMHGKFLDGRVIFVE+AK R+ELRQ
Sbjct: 120 RGFAFLRYSTEEESEKAIEGMHGKFLDGRVIFVEVAKPRSELRQ 163
>gi|388505224|gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/126 (69%), Positives = 102/126 (80%), Gaps = 8/126 (6%)
Query: 53 RGRGACFPLACLPPSPHSLSTCQPK--------TRLFVSGLSFRTSEDSLRNAFQGFGQL 104
R +G+C+ LACLPPS S S+ TRL+VSGLSFRT+E+SLRN F+ FGQL
Sbjct: 61 RIQGSCYLLACLPPSSESSSSSPSAKPSSSAPSTRLYVSGLSFRTTEESLRNCFKNFGQL 120
Query: 105 VEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQAF 164
V+VNLVMDK+ANRPRGFAFLRYATEEES++AIEGMHGKFLDGRVIFVE+AK R+ELRQ F
Sbjct: 121 VDVNLVMDKLANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKPRSELRQRF 180
Query: 165 KNNPRQ 170
+ N Q
Sbjct: 181 QQNTMQ 186
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/114 (70%), Positives = 94/114 (82%), Gaps = 6/114 (5%)
Query: 53 RGRGACFPLACLPPSPHSL------STCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVE 106
R + +C LACLPP + S P+T+L+VSGLSFRT+E+SLRNAF+ FGQLVE
Sbjct: 57 RNKASCSVLACLPPESSTSSSTAKPSFPSPQTKLYVSGLSFRTTEESLRNAFKNFGQLVE 116
Query: 107 VNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAEL 160
V LVMD+IANRPRGFAFLRYATEEES++AIEGMHGKFLDGRVIFVE+AK R+EL
Sbjct: 117 VKLVMDRIANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKPRSEL 170
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
gi|222859004|gb|EEE96551.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 83/87 (95%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
KT+L+VSGLSFRT+E+SLRNAFQ FGQLV+VNLVMDK+A RPRGFAFLRY TEEE+++AI
Sbjct: 89 KTKLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAI 148
Query: 137 EGMHGKFLDGRVIFVEIAKSRAELRQA 163
EGMHGKFLDGRVIFVE+AK R+ELRQ+
Sbjct: 149 EGMHGKFLDGRVIFVEVAKPRSELRQS 175
>gi|449507141|ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Cucumis
sativus]
Length = 175
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/92 (72%), Positives = 80/92 (86%), Gaps = 5/92 (5%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P TRL++SGLSFRT+E+SLRNAF+ FGQLVEVNLVMD++ANRPRGFAFLRYA+EEES++A
Sbjct: 87 PSTRLYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKA 146
Query: 136 IEGMHGKFLDGRVIFVEIAKSRAELRQAFKNN 167
IEGMHGK FVE+AKSR+ELRQ + N
Sbjct: 147 IEGMHGK-----GDFVEVAKSRSELRQGLEEN 173
>gi|15219486|ref|NP_177494.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11120799|gb|AAG30979.1|AC012396_15 RNA-binding glycine-rich protein, putative [Arabidopsis thaliana]
gi|62867629|gb|AAY17418.1| At1g73530 [Arabidopsis thaliana]
gi|114050615|gb|ABI49457.1| At1g73530 [Arabidopsis thaliana]
gi|332197351|gb|AEE35472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 181
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 84/96 (87%), Gaps = 3/96 (3%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
PKT+L+VSGLSFRT+ED+LR+ F+ FG L+ +N+VMDK+ANRP+GFAFLRY TEEE+ +A
Sbjct: 75 PKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKA 134
Query: 136 IEGMHGKFLDGRVIFVEIAKSRAELRQAFKNNPRQN 171
I+GMHGKFLDGRVIFVE AK+R+++ +A PR++
Sbjct: 135 IQGMHGKFLDGRVIFVEEAKTRSDMSRA---KPRRD 167
>gi|297842099|ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334772|gb|EFH65190.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 80/87 (91%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
KT+L+VSGLSFRT+ED+LR+ F+ FG+L+ +NLVMDK+ANRPRGFAFLRY TEEE+ +AI
Sbjct: 76 KTKLYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKAI 135
Query: 137 EGMHGKFLDGRVIFVEIAKSRAELRQA 163
+GMHGKFLDGRVIFVE AK+R+++ +A
Sbjct: 136 QGMHGKFLDGRVIFVEEAKTRSDISRA 162
>gi|222629430|gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 76/83 (91%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+RL+VSGLSFRT+E+SLRNAF+ FGQL EVNLVM+++A RPRGFAFL YA+EEES+ A+E
Sbjct: 67 SRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAME 126
Query: 138 GMHGKFLDGRVIFVEIAKSRAEL 160
GM GKFLDGRVIFVE+A+ R+EL
Sbjct: 127 GMQGKFLDGRVIFVEVARQRSEL 149
>gi|218195435|gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 76/83 (91%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+RL+VSGLSFRT+E+SLRNAF+ FGQL EVNLVM+++A RPRGFAFL YA+EEES+ A+E
Sbjct: 70 SRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAME 129
Query: 138 GMHGKFLDGRVIFVEIAKSRAEL 160
GM GKFLDGRVIFVE+A+ R+EL
Sbjct: 130 GMQGKFLDGRVIFVEVARQRSEL 152
>gi|226498016|ref|NP_001151732.1| RNA binding protein [Zea mays]
gi|195649405|gb|ACG44170.1| RNA binding protein [Zea mays]
Length = 147
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 76/98 (77%), Gaps = 3/98 (3%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
ACLPP S TRL+VSGLSFRT+E SLR+AF+ FG L EV LVMD++A RPRGF
Sbjct: 52 ACLPPPSTSHGAA---TRLYVSGLSFRTTERSLRDAFEKFGDLTEVCLVMDRVAKRPRGF 108
Query: 122 AFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAE 159
AFL Y EEE+R A+EGMHGKFLDGRVIFVE+AK R E
Sbjct: 109 AFLSYTGEEEARGAMEGMHGKFLDGRVIFVEVAKRRVE 146
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 74/91 (81%), Gaps = 6/91 (6%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
PPS H+ LF+ GLSFRT+E+SLR+AF+ FGQL EVNLVMD++A RPRGFAFL
Sbjct: 109 PPSLHAHVA------LFIEGLSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGFAFL 162
Query: 125 RYATEEESRRAIEGMHGKFLDGRVIFVEIAK 155
YA EEES+ A+EGMHGKFLDGRVIFVE+AK
Sbjct: 163 SYANEEESKNAMEGMHGKFLDGRVIFVEVAK 193
>gi|449439247|ref|XP_004137398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like-B-like
[Cucumis sativus]
Length = 170
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 65/67 (97%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P TRL++SGLSFRT+E+SLRNAF+ FGQLVEVNLVMD++ANRPRGFAFLRYA+EEES++A
Sbjct: 87 PSTRLYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKA 146
Query: 136 IEGMHGK 142
IEGMHGK
Sbjct: 147 IEGMHGK 153
>gi|255573326|ref|XP_002527590.1| conserved hypothetical protein [Ricinus communis]
gi|223533029|gb|EEF34792.1| conserved hypothetical protein [Ricinus communis]
Length = 66
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 57/58 (98%)
Query: 85 LSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
+SFRT+E+SLRNAFQ FG+LVEVNLVMDKIANRPRGFAFLRYATEEES++AIEGMHGK
Sbjct: 7 ISFRTTEESLRNAFQNFGKLVEVNLVMDKIANRPRGFAFLRYATEEESQKAIEGMHGK 64
>gi|116782406|gb|ABK22494.1| unknown [Picea sitchensis]
Length = 178
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 69/89 (77%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L+VSGLS+ T+E SLRNAF FG LVE +VMD++ R RGFAFLRYA EEE+ AI+GM
Sbjct: 84 LYVSGLSYYTTEQSLRNAFSSFGNLVEATIVMDRVTKRSRGFAFLRYAYEEEAEAAIKGM 143
Query: 140 HGKFLDGRVIFVEIAKSRAELRQAFKNNP 168
HGKFLDGRVIFVE +K +ELR A +P
Sbjct: 144 HGKFLDGRVIFVEYSKLPSELRGAPPKSP 172
>gi|242080503|ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 65/97 (67%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P LFVSGLS RT+ + LR+AF FG++V +V D+++ +GF F+RYAT EE+ +
Sbjct: 32 DPSPNLFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTEEATK 91
Query: 135 AIEGMHGKFLDGRVIFVEIAKSRAELRQAFKNNPRQN 171
IEGM GKFLDG VIF E A+ RA QA N+P Q
Sbjct: 92 GIEGMDGKFLDGWVIFAEYARPRAPPEQAEMNSPPQQ 128
>gi|297830792|ref|XP_002883278.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329118|gb|EFH59537.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 376
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 64/79 (81%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF++GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+AFL Y TEE + A++
Sbjct: 285 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAASAALKE 344
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+GK ++G +I V++AK++
Sbjct: 345 MNGKIINGWMIVVDVAKTK 363
>gi|224110196|ref|XP_002315444.1| predicted protein [Populus trichocarpa]
gi|222864484|gb|EEF01615.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 64/78 (82%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF++GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+AF++Y TEE + A++
Sbjct: 220 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFVKYTTEEAASSALKE 279
Query: 139 MHGKFLDGRVIFVEIAKS 156
M+GK ++G +I V++AKS
Sbjct: 280 MNGKIINGWMIVVDVAKS 297
>gi|449525960|ref|XP_004169984.1| PREDICTED: uncharacterized LOC101208465 [Cucumis sativus]
Length = 394
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 64 LPPSPHSLSTCQPKTR-LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
LP S + T KT+ LF++GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+A
Sbjct: 291 LPDSSGTHQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYA 350
Query: 123 FLRYATEEESRRAIEGMHGKFLDGRVIFVEIAK 155
F+ Y TEE + A++ M+GK ++G +I V+IAK
Sbjct: 351 FVEYTTEEAASAALKEMNGKIINGWMIVVDIAK 383
>gi|449446458|ref|XP_004140988.1| PREDICTED: uncharacterized protein LOC101208465 [Cucumis sativus]
Length = 394
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 64 LPPSPHSLSTCQPKTR-LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
LP S + T KT+ LF++GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+A
Sbjct: 291 LPDSSGTHQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYA 350
Query: 123 FLRYATEEESRRAIEGMHGKFLDGRVIFVEIAK 155
F+ Y TEE + A++ M+GK ++G +I V+IAK
Sbjct: 351 FVEYTTEEAASAALKEMNGKIINGWMIVVDIAK 383
>gi|225464121|ref|XP_002264164.1| PREDICTED: uncharacterized protein LOC100265361 [Vitis vinifera]
Length = 409
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 62/77 (80%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV+GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+AF+ Y TEE + A++
Sbjct: 318 KLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 377
Query: 139 MHGKFLDGRVIFVEIAK 155
M+GK ++G +I V++AK
Sbjct: 378 MNGKIINGWMIVVDVAK 394
>gi|147867424|emb|CAN83272.1| hypothetical protein VITISV_001132 [Vitis vinifera]
Length = 408
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 68/93 (73%), Gaps = 4/93 (4%)
Query: 67 SPHSLSTCQPKT----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
S S+ QP +LFV+GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+A
Sbjct: 301 SLDSMEANQPTNIKXKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYA 360
Query: 123 FLRYATEEESRRAIEGMHGKFLDGRVIFVEIAK 155
F+ Y+TEE + A++ M+GK ++G +I V++AK
Sbjct: 361 FIEYSTEEAASAALKEMNGKIINGWMIVVDVAK 393
>gi|18402803|ref|NP_566672.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20466724|gb|AAM20679.1| unknown protein [Arabidopsis thaliana]
gi|21536799|gb|AAM61131.1| unknown [Arabidopsis thaliana]
gi|25084257|gb|AAN72206.1| unknown protein [Arabidopsis thaliana]
gi|332642921|gb|AEE76442.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 374
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 64/79 (81%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF++GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+AFL Y TEE + A++
Sbjct: 283 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKE 342
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+GK ++G +I V++AK++
Sbjct: 343 MNGKIINGWMIVVDVAKTK 361
>gi|296087958|emb|CBI35241.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
Query: 67 SPHSLSTCQPKT----RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
S S+ QP +LFV+GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+A
Sbjct: 208 SLDSMEANQPTNIKTKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYA 267
Query: 123 FLRYATEEESRRAIEGMHGKFLDGRVIFVEIAK 155
F+ Y TEE + A++ M+GK ++G +I V++AK
Sbjct: 268 FIEYTTEEAASAALKEMNGKIINGWMIVVDVAK 300
>gi|356576299|ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791652 [Glycine max]
Length = 386
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 62/77 (80%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV+GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+AF+ Y TEE + A++
Sbjct: 298 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIMDKISKRSKGYAFVEYTTEEAASAALKE 357
Query: 139 MHGKFLDGRVIFVEIAK 155
M+GK ++G +I V++AK
Sbjct: 358 MNGKIINGWMIVVDVAK 374
>gi|222623613|gb|EEE57745.1| hypothetical protein OsJ_08262 [Oryza sativa Japonica Group]
Length = 369
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 64/84 (76%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV+GLSF TSE +LR AF+ FG+LVEV ++MDKI+ R +G+AF+ Y TEE A++
Sbjct: 266 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAALKA 325
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQ 162
M+G+ ++G +I V++AK R+ RQ
Sbjct: 326 MNGQIINGWMIVVDVAKHRSRDRQ 349
>gi|115448473|ref|NP_001048016.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|46390469|dbj|BAD15930.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|46390865|dbj|BAD16369.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113537547|dbj|BAF09930.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|218191513|gb|EEC73940.1| hypothetical protein OsI_08808 [Oryza sativa Indica Group]
Length = 399
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 64/84 (76%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV+GLSF TSE +LR AF+ FG+LVEV ++MDKI+ R +G+AF+ Y TEE A++
Sbjct: 296 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAALKA 355
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQ 162
M+G+ ++G +I V++AK R+ RQ
Sbjct: 356 MNGQIINGWMIVVDVAKHRSRDRQ 379
>gi|357442985|ref|XP_003591770.1| RNA-binding protein [Medicago truncatula]
gi|355480818|gb|AES62021.1| RNA-binding protein [Medicago truncatula]
Length = 284
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 64 LPPSPHSLSTCQPKTR-LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
+P S + KT+ LFV+GLSF TSE +LR AF+GFG+LVEV +++DKI+ R +G+A
Sbjct: 177 MPNSSEASQEASVKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIIDKISKRSKGYA 236
Query: 123 FLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKS 156
F+ Y TEE + A++ M+GK ++G +I V++AK+
Sbjct: 237 FIEYTTEEAASAALKEMNGKIINGWMIVVDVAKT 270
>gi|255580168|ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
gi|223529509|gb|EEF31464.1| RNA binding protein, putative [Ricinus communis]
Length = 354
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 68 PHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYA 127
P + +P T LFVSGLS RT+ + L+ AF FG++V+ +V D+++ +GF F+RY
Sbjct: 42 PSAREQAEPNTNLFVSGLSKRTTTEGLKQAFSKFGEVVQARVVTDRVSGYSKGFGFVRYG 101
Query: 128 TEEESRRAIEGMHGKFLDGRVIFVEIAKSRAEL-----RQAFKNN 167
+ E++ + IEGM GKFLDG VIF E A+ R L A+ NN
Sbjct: 102 SLEDAEKGIEGMDGKFLDGWVIFAEYARPRPPLPGNNTGSAYGNN 146
>gi|449468518|ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 174
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 60/94 (63%)
Query: 64 LPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
LPPS +P T LFVSGLS RT+ + L AF FG++ +V D++ +GF F
Sbjct: 65 LPPSAQQREVAEPSTNLFVSGLSKRTTTEKLHEAFAKFGEVAHARVVTDRVTGYSKGFGF 124
Query: 124 LRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
++YAT E++ + IEGM GKFLDG VIF E A+ R
Sbjct: 125 VKYATLEDAAKGIEGMDGKFLDGWVIFAEYARPR 158
>gi|224286824|gb|ACN41115.1| unknown [Picea sitchensis]
Length = 149
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 60 PLACLPPSPHSLSTCQP-KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
P + SP L + T+LF+SGLS +T+++ LR F FGQLVE +V D+I+ R
Sbjct: 25 PFCAVRSSPIGLGAVRDFTTKLFISGLSRQTTDEGLRAKFSEFGQLVEARVVTDRISGRS 84
Query: 119 RGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAK 155
RGF F+RYAT E++ + EGM GKFLDG VIF + AK
Sbjct: 85 RGFGFVRYATLEDAAKGKEGMDGKFLDGWVIFADFAK 121
>gi|388512901|gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 65/95 (68%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+P T LFVSGLS RT+ ++LR AFQ FG++V +V D+++ +GF F++YAT E++ +
Sbjct: 48 EPSTNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAK 107
Query: 135 AIEGMHGKFLDGRVIFVEIAKSRAELRQAFKNNPR 169
IEGM GKFL+G VIF E A+ R +A N R
Sbjct: 108 GIEGMDGKFLEGWVIFAEYARPRPPPGEAVNNTGR 142
>gi|356517261|ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 145
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 57 ACFP-LACLPPSPH---SLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMD 112
+ FP ++ LPP + T +P T LFVSGLS RT+ + LR F FG++V +V D
Sbjct: 24 SSFPFVSTLPPGATPAPTRPTAEPNTNLFVSGLSKRTNTERLREEFAKFGEVVHARVVTD 83
Query: 113 KIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKNNPRQ 170
+++ +GF F++YAT E++ + IEGM GKFLDG VIF E A+ R Q +N Q
Sbjct: 84 RVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPLNSNSSQ 141
>gi|413938711|gb|AFW73262.1| chloroplast protein synthesis 4 [Zea mays]
Length = 400
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 67/89 (75%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV+GLSF TSE +LR AF+ FG+LVEV ++MD+I+ R +G+AF+ Y TEE A++
Sbjct: 302 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGAALKA 361
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQAFKNN 167
M+G+ ++G +I V++AK+R+ R + +N
Sbjct: 362 MNGQIINGWMIVVDVAKTRSRDRLSGGSN 390
>gi|259490527|ref|NP_001159310.1| uncharacterized protein LOC100304402 [Zea mays]
gi|223943329|gb|ACN25748.1| unknown [Zea mays]
gi|413938710|gb|AFW73261.1| chloroplast protein synthesis 4 [Zea mays]
Length = 398
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 67/89 (75%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV+GLSF TSE +LR AF+ FG+LVEV ++MD+I+ R +G+AF+ Y TEE A++
Sbjct: 300 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGAALKA 359
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQAFKNN 167
M+G+ ++G +I V++AK+R+ R + +N
Sbjct: 360 MNGQIINGWMIVVDVAKTRSRDRLSGGSN 388
>gi|15239676|ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758950|dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana]
gi|18175762|gb|AAL59923.1| unknown protein [Arabidopsis thaliana]
gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis thaliana]
gi|21553374|gb|AAM62467.1| unknown [Arabidopsis thaliana]
gi|332009129|gb|AED96512.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 156
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+P T LFVSGLS RT+ + LR AF FG++ + +V D+++ +GF F+RYAT E+S
Sbjct: 52 AEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSA 111
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKNNPRQN 171
+ I GM GKFLDG VIF E A+ R E Q+++ P+ N
Sbjct: 112 KGIAGMDGKFLDGWVIFAEYARPR-EQSQSYQ--PQNN 146
>gi|115472673|ref|NP_001059935.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|28564803|dbj|BAC57733.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113611471|dbj|BAF21849.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|125600644|gb|EAZ40220.1| hypothetical protein OsJ_24665 [Oryza sativa Japonica Group]
gi|215767980|dbj|BAH00209.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 133
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGL+ RT+ D LR AF FGQ++E ++ D+I+ RGF F++YAT EE+ I+GM
Sbjct: 37 LFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 96
Query: 140 HGKFLDGRVIFVEIAKSR 157
GKFLDG VIF E AK R
Sbjct: 97 DGKFLDGWVIFAEYAKQR 114
>gi|116792076|gb|ABK26221.1| unknown [Picea sitchensis]
Length = 151
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 61/88 (69%)
Query: 70 SLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
S P +LFVSGLS RT+++ LR AF FG+++E +V DK+ +GFAF+RYAT+
Sbjct: 39 STEPADPSPKLFVSGLSKRTTDEGLREAFSKFGRVLEARVVTDKMNGVSKGFAFVRYATQ 98
Query: 130 EESRRAIEGMHGKFLDGRVIFVEIAKSR 157
EE+ + EGM GKFLDG VIF + A+ R
Sbjct: 99 EEADKGKEGMDGKFLDGWVIFADYARPR 126
>gi|125558733|gb|EAZ04269.1| hypothetical protein OsI_26412 [Oryza sativa Indica Group]
Length = 133
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGL+ RT+ D LR AF FGQ++E ++ D+I+ RGF F++YAT EE+ I+GM
Sbjct: 37 LFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 96
Query: 140 HGKFLDGRVIFVEIAKSR 157
GKFLDG VIF E AK R
Sbjct: 97 DGKFLDGWVIFAEYAKQR 114
>gi|388511713|gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
PP+ + +P T LFVSGL+ RT+ + LR F FG++V +V D+++ +GF F+
Sbjct: 33 PPTTRQMG--EPSTNLFVSGLNKRTTTEKLREEFAKFGEVVHARVVTDRVSGYSKGFGFV 90
Query: 125 RYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKNN 167
+YAT EE+ + I+GM GKFLDG VIF E AKS Q NN
Sbjct: 91 KYATIEEASKGIQGMDGKFLDGWVIFAEYAKSSPAPGQQPANN 133
>gi|297792921|ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310180|gb|EFH40604.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 59/86 (68%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+P T LFVSGLS RT+ + LR AF FG++ + +V D+++ +GF F+RYAT E+S
Sbjct: 52 AEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSA 111
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAE 159
+ I GM GKFLDG VIF E A+ R +
Sbjct: 112 KGIAGMDGKFLDGWVIFAEYARPREQ 137
>gi|357143694|ref|XP_003573016.1| PREDICTED: uncharacterized protein LOC100843274 [Brachypodium
distachyon]
Length = 387
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 63/84 (75%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV+GLSF TSE +LR AF+ FG+LVEV ++MDKI+ R +G+AF+ Y TE+ A++
Sbjct: 289 RLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEDAGGAALKA 348
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQ 162
M+G+ ++G +I V++AK+ RQ
Sbjct: 349 MNGEIINGWMIVVDVAKTNLRNRQ 372
>gi|226500552|ref|NP_001148723.1| ELAV-like protein 4 [Zea mays]
gi|195621654|gb|ACG32657.1| ELAV-like protein 4 [Zea mays]
Length = 127
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGL+ RT+ + L+ AF FGQ++E ++ D+I+ RGF F++YAT +E+ AIEGM
Sbjct: 36 LFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIEGM 95
Query: 140 HGKFLDGRVIFVEIAKSR 157
GKFLDG VIF E AK R
Sbjct: 96 DGKFLDGWVIFAEYAKQR 113
>gi|38344030|emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
gi|38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa Japonica Group]
gi|116309334|emb|CAH66418.1| H0622F05.1 [Oryza sativa Indica Group]
gi|116309399|emb|CAH66476.1| OSIGBa0137L20.5 [Oryza sativa Indica Group]
Length = 137
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLF+ GLS +EDSL AF +GQ++E +V DK+ NRP+GF F+++A+EE + +A E
Sbjct: 38 RLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEE 97
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQAFKNNPR 169
M+GK L+GRVI+V+IAK A++ + ++PR
Sbjct: 98 MNGKVLNGRVIYVDIAK--AKMNRTTDSSPR 126
>gi|357122488|ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Brachypodium distachyon]
Length = 138
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGL+ RT+ D LR AF FGQ+ E ++ D+I+ RGF F++YAT EE+ I+GM
Sbjct: 42 LFVSGLNKRTTTDGLREAFSKFGQVTEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 101
Query: 140 HGKFLDGRVIFVEIAKSR 157
GKFLDG VIF E AK R
Sbjct: 102 DGKFLDGWVIFAEYAKQR 119
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
P LF+SGLS RT+ D L+ AF FG+++ +V D++ +GF F+RYAT E++
Sbjct: 32 ADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAA 91
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKNN-PRQN 171
+ IEGM GKFLDG VIF E A+ R +Q N+ P+Q+
Sbjct: 92 KGIEGMDGKFLDGWVIFAEYARPRTPPQQPEMNSQPQQS 130
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
P LF+SGLS RT+ D L+ AF FG+++ +V D++ +GF F+RYAT E++
Sbjct: 32 ADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAA 91
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKNN-PRQN 171
+ IEGM GKFLDG VIF E A+ R +Q N+ P+Q+
Sbjct: 92 KGIEGMDGKFLDGWVIFAEYARPRTPPQQPEMNSQPQQS 130
>gi|255565709|ref|XP_002523844.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
gi|223536932|gb|EEF38570.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
Length = 121
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
Query: 65 PPSPHSLST-CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
P +P ST +RLFV G+SF ++ +SL AF FG++VEVN++ DK +RP+G+A+
Sbjct: 20 PNTPLFFSTNSASSSRLFVKGISFSSTTESLTEAFSKFGEIVEVNIIKDKAMDRPKGYAY 79
Query: 124 LRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA--ELRQ 162
+ +ATE E+++A+ M+GK +DGR +FV+ SR+ LRQ
Sbjct: 80 VTFATENEAKKALTEMNGKVIDGRPVFVDNVSSRSIGRLRQ 120
>gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 62/83 (74%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLSF T+E +L AF FG++VEV +VMD+++ R +GF F++YA+E ++ RA
Sbjct: 32 TKLFVGGLSFYTTEKALTEAFSRFGEVVEVKVVMDRVSQRSKGFGFVQYASEADAERAKA 91
Query: 138 GMHGKFLDGRVIFVEIAKSRAEL 160
M+GK L GR+IFV+ K +++L
Sbjct: 92 EMNGKVLSGRIIFVDTVKPKSQL 114
>gi|356505124|ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 139
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 61/87 (70%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
LS+ +LFVSGLS T +++L+ AF FGQLVE ++ D+ + R +GFAF+ Y T E
Sbjct: 26 LSSTLTSPKLFVSGLSRLTKDENLKEAFSSFGQLVEAKVITDRASGRSKGFAFVTYTTIE 85
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKSR 157
E+ RA EGM+ KFLDG VIFV+ AK R
Sbjct: 86 EAERAREGMNAKFLDGWVIFVDPAKPR 112
>gi|255568010|ref|XP_002524982.1| RNA binding protein, putative [Ricinus communis]
gi|223535726|gb|EEF37389.1| RNA binding protein, putative [Ricinus communis]
Length = 371
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 58/73 (79%)
Query: 84 GLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKF 143
GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+AF+ Y TEE + A++ M+GK
Sbjct: 285 GLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAANAALKEMNGKI 344
Query: 144 LDGRVIFVEIAKS 156
++G +I V++AK+
Sbjct: 345 INGWMIVVDVAKT 357
>gi|242045928|ref|XP_002460835.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
gi|241924212|gb|EER97356.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
Length = 131
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGL+ RT+ + L+ AF FGQ++E ++ D+I+ RGF F++YAT +E+ AI+GM
Sbjct: 38 LFVSGLNKRTTSNGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIKGM 97
Query: 140 HGKFLDGRVIFVEIAKSR 157
GKFLDG VIF E AK R
Sbjct: 98 DGKFLDGWVIFAEYAKQR 115
>gi|224091949|ref|XP_002309412.1| predicted protein [Populus trichocarpa]
gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Query: 62 ACLPPSPHSLSTCQ--PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPR 119
A L +P +L Q T+LFV GLS T+E+ L AF +GQ+VE +VMD+ +R +
Sbjct: 21 AKLVAAPTALFIWQRGITTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSK 80
Query: 120 GFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAK 155
GF F+ YA+E+E+++A++ M+GK L+GRVI+V+ AK
Sbjct: 81 GFGFVTYASEDEAQKALDEMNGKALNGRVIYVDYAK 116
>gi|116779573|gb|ABK21345.1| unknown [Picea sitchensis]
gi|224285462|gb|ACN40453.1| unknown [Picea sitchensis]
Length = 198
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 68/97 (70%), Gaps = 5/97 (5%)
Query: 59 FPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
P+ACLPP + + +LFV+GLS T+E +L+NAF +G++V+V ++M+K R
Sbjct: 74 LPVACLPPPTRTRNN-----KLFVTGLSIYTTERTLQNAFSNYGKVVDVRIIMNKTTRRS 128
Query: 119 RGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAK 155
+GF F+ ++TEEE+ A++ M+GK L+G +I V+IAK
Sbjct: 129 KGFGFVEFSTEEEANTALKEMNGKILNGWLISVDIAK 165
>gi|388493798|gb|AFK34965.1| unknown [Medicago truncatula]
Length = 185
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 68/104 (65%), Gaps = 6/104 (5%)
Query: 60 PLACLPPSPHS------LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDK 113
P A P P S L T +P +FV+GL+ RT+ ++LR AF+ FG++ +V +V D+
Sbjct: 20 PTASSPTVPLSSGVTSALKTAEPNEIVFVTGLNKRTTSETLREAFKKFGEVKQVRVVADR 79
Query: 114 IANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
++ +GF ++RYAT E++ + I+GM GKFL+G ++F E A+ R
Sbjct: 80 VSGYSKGFGYVRYATSEDAAKGIQGMDGKFLEGWIVFAEYARPR 123
>gi|326527061|dbj|BAK04472.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 139
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 54/78 (69%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGL+ RT+ D LR AF FGQ+ + ++ D+I+ RGF F++YAT EE+ I+GM
Sbjct: 42 LFVSGLNKRTTSDGLREAFSKFGQVTDARVITDRISGYSRGFGFVKYATVEEAAEGIKGM 101
Query: 140 HGKFLDGRVIFVEIAKSR 157
GKF DG VIF E AK R
Sbjct: 102 DGKFFDGWVIFAEYAKQR 119
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
P LFVSGLS RT+ D LR AF FG+++ +V D++ +GF F+RYA+ E++
Sbjct: 44 ADPSPNLFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDAS 103
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
+ IEGM GKFLDG VIF E A+ R
Sbjct: 104 KGIEGMDGKFLDGWVIFAEYARPR 127
>gi|38346812|emb|CAD41379.2| OSJNBa0088A01.19 [Oryza sativa Japonica Group]
Length = 92
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 49/54 (90%)
Query: 107 VNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAEL 160
VNLVM+++A RPRGFAFL YA+EEES+ A+EGM GKFLDGRVIFVE+A+ R+EL
Sbjct: 39 VNLVMERVAKRPRGFAFLSYASEEESKNAMEGMQGKFLDGRVIFVEVARQRSEL 92
>gi|356543191|ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]
Length = 145
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 60/91 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGLS RT+ + LR F FG++V +V D+++ +GF F++YAT EE+ + IEGM
Sbjct: 51 LFVSGLSKRTTTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEEAAKGIEGM 110
Query: 140 HGKFLDGRVIFVEIAKSRAELRQAFKNNPRQ 170
GKFLDG VIF E A+ R Q+ NN Q
Sbjct: 111 DGKFLDGWVIFAEYARPRPPPGQSLNNNSPQ 141
>gi|255581040|ref|XP_002531336.1| RNA binding protein, putative [Ricinus communis]
gi|223529058|gb|EEF31043.1| RNA binding protein, putative [Ricinus communis]
Length = 144
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
HS TC RLFVSGLS T+++ L+ AF FGQLV+ +++D+ + R +GF F+ YAT
Sbjct: 30 HSTLTCP---RLFVSGLSRLTTDEKLKEAFSPFGQLVDAKVIIDRASGRSKGFGFITYAT 86
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAK 155
EE+ +A EGM+ KFLDG VIFV+ AK
Sbjct: 87 IEEAEKAREGMNAKFLDGWVIFVDPAK 113
>gi|226496497|ref|NP_001150207.1| LOC100283837 [Zea mays]
gi|195621336|gb|ACG32498.1| nucleolin [Zea mays]
gi|195637560|gb|ACG38248.1| nucleolin [Zea mays]
gi|223948323|gb|ACN28245.1| unknown [Zea mays]
gi|413917478|gb|AFW57410.1| nucleolin [Zea mays]
Length = 140
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 56/83 (67%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P LFVSGLS RT+ + LR AF FG+++ +V D+++ +GF F+RYAT EE+ +
Sbjct: 32 DPSPNLFVSGLSKRTTSEGLREAFAEFGEVLHARVVTDRVSGFSKGFGFVRYATTEEAAK 91
Query: 135 AIEGMHGKFLDGRVIFVEIAKSR 157
IEG GKFLDG VIF E AK R
Sbjct: 92 GIEGKDGKFLDGWVIFAEYAKPR 114
>gi|115452257|ref|NP_001049729.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|108707493|gb|ABF95288.1| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113548200|dbj|BAF11643.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|125543333|gb|EAY89472.1| hypothetical protein OsI_11004 [Oryza sativa Indica Group]
gi|125585797|gb|EAZ26461.1| hypothetical protein OsJ_10350 [Oryza sativa Japonica Group]
Length = 173
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 60/81 (74%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+SGLS T+++ L+NAF FGQL+E ++ D+I+ R +GF F+RYAT EE+ A +
Sbjct: 68 KLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAENARQE 127
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
M+ KFLDG VIFV+ AK R +
Sbjct: 128 MNAKFLDGWVIFVDPAKPRQQ 148
>gi|225423629|ref|XP_002274983.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|359473083|ref|XP_003631246.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Vitis vinifera]
gi|297738010|emb|CBI27211.3| unnamed protein product [Vitis vinifera]
gi|297738011|emb|CBI27212.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 59/78 (75%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+R+ V+ LS+ TS+ SL+ F FGQ+VEV++V DK A RPRG+AF++Y +++ + A+E
Sbjct: 38 SRIMVTNLSYATSKSSLQEEFSKFGQIVEVDVVKDKAAKRPRGYAFIQYTSQDHAMLALE 97
Query: 138 GMHGKFLDGRVIFVEIAK 155
M K+LDGRV+ VE+AK
Sbjct: 98 NMDHKYLDGRVVCVELAK 115
>gi|125543335|gb|EAY89474.1| hypothetical protein OsI_11005 [Oryza sativa Indica Group]
Length = 173
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 60/81 (74%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+SGLS T+++ L+NAF FGQL+E ++ D+I+ R +GF F+RYAT EE+ A +
Sbjct: 68 KLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAENARQE 127
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
M+ KFLDG VIFV+ AK R +
Sbjct: 128 MNAKFLDGWVIFVDPAKPRQQ 148
>gi|224115158|ref|XP_002316957.1| predicted protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 59/84 (70%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+P T LFVSGLS RT+ + L+ AF FG++V+ +V D+++ +GF F++YAT E++
Sbjct: 51 AEPNTNLFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAA 110
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
I+GM G+FLDG VIF E A+ R
Sbjct: 111 EGIKGMDGQFLDGWVIFAEYARPR 134
>gi|351725383|ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 59/77 (76%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E++L AF +GQ++E +V D++++R +GF F+ +A+++E+ AIE
Sbjct: 30 KLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAENAIED 89
Query: 139 MHGKFLDGRVIFVEIAK 155
M GK L+GRVIFV+ AK
Sbjct: 90 MKGKTLNGRVIFVDYAK 106
>gi|225461185|ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|147854770|emb|CAN78606.1| hypothetical protein VITISV_024164 [Vitis vinifera]
gi|302143178|emb|CBI20473.3| unnamed protein product [Vitis vinifera]
Length = 135
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 56/83 (67%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+P T LFVSGLS RT+ + L AF FGQ+V +V D+++ +GF F+RY + E++
Sbjct: 38 EPSTNLFVSGLSKRTTSEGLHEAFSKFGQVVNARVVTDRVSGYSKGFGFVRYVSLEDAAE 97
Query: 135 AIEGMHGKFLDGRVIFVEIAKSR 157
I+GM GKFLDG VIF E A+ R
Sbjct: 98 GIKGMDGKFLDGWVIFAEYARPR 120
>gi|351724829|ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
gi|255628209|gb|ACU14449.1| unknown [Glycine max]
Length = 139
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 60/87 (68%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
LS+ +LFVSGL T ++ L+ AF FGQLVE +++D+ + R +GFAF+ Y T E
Sbjct: 26 LSSTLTSPKLFVSGLCRLTIDEKLKEAFSSFGQLVEAKVIIDRASGRSKGFAFVTYTTIE 85
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKSR 157
E+ +A EGM+ KFLDG VIFV+ AK R
Sbjct: 86 EAEKAREGMNAKFLDGWVIFVDPAKPR 112
>gi|225439737|ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|297741476|emb|CBI32608.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 61/89 (68%)
Query: 67 SPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRY 126
SP ++ +LFVSGLS T+++ L+ AF FGQL+E ++ D+++ R +GF F+ Y
Sbjct: 23 SPARFNSTVTSPKLFVSGLSRLTTDEKLKEAFSPFGQLLEAKVITDRVSGRSKGFGFVTY 82
Query: 127 ATEEESRRAIEGMHGKFLDGRVIFVEIAK 155
T EE+ +A EGM+ KFLDG VIFV+ AK
Sbjct: 83 TTLEEAEKAREGMNAKFLDGWVIFVDPAK 111
>gi|224124176|ref|XP_002319264.1| predicted protein [Populus trichocarpa]
gi|118487492|gb|ABK95573.1| unknown [Populus trichocarpa]
gi|222857640|gb|EEE95187.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+P T LFVSGLS RT+ + L+ AF FG++V+ +V D+ + +GF F+RY T E++
Sbjct: 50 AEPNTNLFVSGLSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGTLEDAA 109
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
I+GM G+FLDG VIF E A+ +
Sbjct: 110 EGIKGMDGQFLDGWVIFAEYARPK 133
>gi|359482021|ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
Query: 60 PLACLPPSPHSLSTCQP-KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
P LPP+ L C+ ++LFV GLSF T+E L F +GQ+VE +VMD++++R
Sbjct: 17 PSFLLPPA--LLICCRGIASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRS 74
Query: 119 RGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAEL 160
+GF F+ +A+EEE+++A M GK L+GR IFV+ AK RA+
Sbjct: 75 KGFGFVTFASEEEAQKARTEMDGKELNGRTIFVDYAKPRADF 116
>gi|357167535|ref|XP_003581210.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like
[Brachypodium distachyon]
Length = 137
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 62/81 (76%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLS +ED+L AF +GQ++E +V DK+ NR +GF F+++A+EEE+ +A +
Sbjct: 37 KLFIGGLSQFATEDTLAEAFARYGQVLEATIVTDKMTNRSKGFGFVKFASEEEANKARDE 96
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
M+GK L+GRVI+V+IAK++ +
Sbjct: 97 MNGKVLNGRVIYVDIAKAKQD 117
>gi|255579369|ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
gi|223529933|gb|EEF31861.1| RNA binding protein, putative [Ricinus communis]
Length = 127
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 60/84 (71%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLSF T++ L AF +GQ+VE +V D++ +R +GF F+ +A+E+E+ A+
Sbjct: 31 TKLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASEDEAHNALS 90
Query: 138 GMHGKFLDGRVIFVEIAKSRAELR 161
M+GK L+GRVI+V+ AK R + R
Sbjct: 91 EMNGKTLNGRVIYVDYAKPRTDSR 114
>gi|326514928|dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517426|dbj|BAK00080.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
P LFVSGLS RT+ D LR AF FG++ ++ D++ +GF F+RY T E++
Sbjct: 44 ADPSPNLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAA 103
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
+ IEGM G+FLDG VIF E A+ R
Sbjct: 104 KGIEGMDGEFLDGWVIFAEYARPR 127
>gi|357112848|ref|XP_003558218.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 168
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 60/81 (74%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFVSGLS T+++ L+NAF FGQ++E ++ D+I+ R +GF F+RY + +E+ A +G
Sbjct: 63 KLFVSGLSRLTTDEKLKNAFIPFGQVLEAKVITDRISGRSKGFGFVRYVSLQEAEAARQG 122
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
M+ KFLDG VIFV+ AK R +
Sbjct: 123 MNAKFLDGWVIFVDPAKPREQ 143
>gi|226529880|ref|NP_001150360.1| RNA binding protein [Zea mays]
gi|195638638|gb|ACG38787.1| RNA binding protein [Zea mays]
gi|414866145|tpg|DAA44702.1| TPA: RNA binding protein [Zea mays]
Length = 166
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGLS T+++ L+ AF FG+L+E +V D+++ R +GF F+RYAT EE+ RA + M
Sbjct: 62 LFVSGLSRLTTDEKLQGAFAPFGRLLEAKVVTDRVSGRSKGFGFVRYATIEEAERARQEM 121
Query: 140 HGKFLDGRVIFVEIAKSR 157
+ KFLDG VIFV+ AK R
Sbjct: 122 NAKFLDGWVIFVDPAKPR 139
>gi|449448655|ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 146
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 59/85 (69%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
LS+ +LF+SGLS T+++ LR AF FGQLV+ +V D+ R +GFAF+ Y+T +
Sbjct: 33 LSSTLTSPKLFISGLSRLTTDEKLREAFSSFGQLVDAKVVTDRATGRSKGFAFVTYSTID 92
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
E+ +A E M+ KFLDG VIFV+ AK
Sbjct: 93 EAEKAREEMNAKFLDGWVIFVDPAK 117
>gi|9293999|dbj|BAB01902.1| unnamed protein product [Arabidopsis thaliana]
Length = 396
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 52/64 (81%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF++GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+AFL Y TEE + A++
Sbjct: 283 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKE 342
Query: 139 MHGK 142
M+GK
Sbjct: 343 MNGK 346
>gi|242036137|ref|XP_002465463.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
gi|241919317|gb|EER92461.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
Length = 169
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 59/79 (74%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFVSGLS T+++ L+ AF FG+++E +V D+++ R +GF F+RYAT EE+ +A +
Sbjct: 64 KLFVSGLSRLTTDEKLQGAFAPFGRILEAKVVTDRVSGRSKGFGFVRYATIEEAEKARQE 123
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+ KFLDG VIFV+ AK R
Sbjct: 124 MNAKFLDGWVIFVDPAKPR 142
>gi|357510439|ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
gi|355500523|gb|AES81726.1| RNA binding protein [Medicago truncatula]
Length = 141
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 58/79 (73%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+SGLS T+++ L AF FGQL+E ++ D+ + R +GFAF+ Y+T EE+ +A EG
Sbjct: 36 KLFISGLSRLTTDEKLTEAFSPFGQLLEAKVITDRGSGRSKGFAFVSYSTIEEAEKAREG 95
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+ KFLDG VIFV+ AK R
Sbjct: 96 MNAKFLDGWVIFVDPAKPR 114
>gi|15231311|ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7630030|emb|CAB88326.1| RNA binding protein-like [Arabidopsis thaliana]
gi|46931202|gb|AAT06405.1| At3g46020 [Arabidopsis thaliana]
gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis thaliana]
gi|332644581|gb|AEE78102.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 102
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 63/93 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFVS LS T++ SLR F FGQ+ E L+ D RP+GF F+ + +E+++R+A++
Sbjct: 8 QLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALKS 67
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQAFKNNPRQN 171
+ GK +DGR+IFVE+AK+ E+R +N ++
Sbjct: 68 LDGKIVDGRLIFVEVAKNAEEVRAGINSNKAED 100
>gi|346469013|gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]
Length = 139
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 53/75 (70%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T LFVSGLS RT+ + LR AF FG++V +V D+++ +GF F++YAT E++ I+
Sbjct: 36 TNLFVSGLSKRTTTEGLREAFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAEGIK 95
Query: 138 GMHGKFLDGRVIFVE 152
GM GKFLDG VIF E
Sbjct: 96 GMDGKFLDGWVIFAE 110
>gi|388519245|gb|AFK47684.1| unknown [Lotus japonicus]
Length = 138
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 72 STCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEE 131
ST +LF+SGLS +T++ L AF FGQL+E ++ D+ + R +GF F+ YA+ EE
Sbjct: 25 STTLTTPKLFISGLSRQTTDRKLNEAFAPFGQLIEAKVITDRASGRSKGFGFVSYASIEE 84
Query: 132 SRRAIEGMHGKFLDGRVIFVEIAKSR 157
+ +A +GM+ KFLDG VIFV+ AK R
Sbjct: 85 AEKAGKGMNAKFLDGWVIFVDPAKPR 110
>gi|242073000|ref|XP_002446436.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
gi|241937619|gb|EES10764.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
Length = 135
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Query: 58 CFPLACLPPSPHSLSTCQPKT---RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKI 114
C P + S+ Q + +LFV GLS +E+SL AF +GQ++E +V DK+
Sbjct: 12 CLASRGSPAAARSMLLAQSRGITYKLFVGGLSQFATEESLAEAFSRYGQVIEATVVRDKV 71
Query: 115 ANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+ P+GF F+++A+ EE+ A E M+GK L+GRVI+V+IAK++
Sbjct: 72 TDIPKGFGFVKFASPEEANNAREEMNGKALNGRVIYVDIAKAK 114
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLS+ T E SLR+ F +GQ++E ++ D+ R RGF F+ YA+ EE+
Sbjct: 27 CMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEAS 86
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
AI + GK LDGR I V A R
Sbjct: 87 AAITALDGKDLDGRNIRVNTANER 110
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLS+ T E SLR+ F +GQ++E ++ D+ R RGF F+ YA+ EE+
Sbjct: 27 CMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEAS 86
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
AI + GK LDGR I V A R
Sbjct: 87 AAITALDGKDLDGRNIRVNTANER 110
>gi|226509825|ref|NP_001150518.1| ELAV-like protein 4 [Zea mays]
gi|195639828|gb|ACG39382.1| ELAV-like protein 4 [Zea mays]
gi|414590519|tpg|DAA41090.1| TPA: ELAV-like protein 4 [Zea mays]
Length = 129
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 53/73 (72%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFVSGL+ RT+ + L+ AF FGQ++E ++ D+I+ RGF F++YAT +E+ AI+GM
Sbjct: 36 LFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIKGM 95
Query: 140 HGKFLDGRVIFVE 152
GKFLD VIF E
Sbjct: 96 DGKFLDSWVIFAE 108
>gi|449462934|ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 64/103 (62%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
+ PP +S T+LFV GLS+ T++ L AF +GQ++E +VMD+++++ +GF
Sbjct: 19 SLFPPPSRLVSYRGIATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGF 78
Query: 122 AFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQAF 164
F+ +A+ +E+ A+ M+GK L+GRVIFV AK R A
Sbjct: 79 GFVTFASLDEAHTALSEMNGKPLNGRVIFVNYAKPTTSSRGAI 121
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 62/109 (56%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ R ++ PS + C ++LFV G+SF+T ++SL+ AF +G +VE
Sbjct: 11 LRQTASRQMASEISASRPSIYQAMRCMSSSKLFVGGISFQTDDNSLKEAFDKYGNVVEAR 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
++MD+ R RGF F+ Y + EE+ AI+ + G+ L GR + V A R
Sbjct: 71 IIMDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYATER 119
>gi|388502672|gb|AFK39402.1| unknown [Medicago truncatula]
Length = 140
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 58/77 (75%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E +L +AF +GQ+VE ++ D+I+ + +G+ F+ +A+++E+ +AI
Sbjct: 33 KLFVGGLSFHTTEKTLSDAFSNYGQVVEAKVITDRISEKSKGYGFVTFASQDEAEKAITE 92
Query: 139 MHGKFLDGRVIFVEIAK 155
M+ K L+GRV+FV+ AK
Sbjct: 93 MNEKALNGRVVFVDYAK 109
>gi|194699346|gb|ACF83757.1| unknown [Zea mays]
gi|414587318|tpg|DAA37889.1| TPA: glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 59/81 (72%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLS +E SL AF +GQ++E +V DK+ + P+GF F+++A+ EE+ A E
Sbjct: 36 KLFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREE 95
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
M+GK L+GRVI+V+IAK+R +
Sbjct: 96 MNGKALNGRVIYVDIAKARQD 116
>gi|226510389|ref|NP_001150093.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195636652|gb|ACG37794.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 59/81 (72%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLS +E SL AF +GQ++E +V DK+ + P+GF F+++A+ EE+ A E
Sbjct: 36 KLFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREE 95
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
M+GK L+GRVI+V+IAK+R +
Sbjct: 96 MNGKALNGRVIYVDIAKARQD 116
>gi|449500867|ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 64/103 (62%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
+ PP +S T+LFV GLS+ T++ L AF +GQ++E +VMD+++++ +GF
Sbjct: 19 SLFPPPSRLVSFRAIATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGF 78
Query: 122 AFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQAF 164
F+ +A+ +E+ A+ M+GK L+GRVIFV AK R A
Sbjct: 79 GFVTFASLDEAHTALSEMNGKPLNGRVIFVNYAKPTTSSRGAI 121
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ R ++ PS + C +++F+ G+SF+T ++ L+ AF +G +VE
Sbjct: 11 LRQTANRQITSEISASRPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEAR 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
++MD+ R RGF F+ Y + EE+ AI+ M G+ L GR + V A R
Sbjct: 71 IIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATER 119
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLS+ T + SLR+ F +GQ++E +++D+ + R RGF F+ Y + EE+
Sbjct: 30 CMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEAS 89
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
AI M GK LDGR I V A R
Sbjct: 90 AAITAMDGKTLDGRNIRVNHANER 113
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLS+ T + SLR+ F +GQ++E +++D+ + R RGF F+ Y + EE+
Sbjct: 27 CMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEAS 86
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
AI M GK LDGR I V A R
Sbjct: 87 AAITAMDGKTLDGRNIRVNHANER 110
>gi|357457753|ref|XP_003599157.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355488205|gb|AES69408.1| Cold-inducible RNA-binding protein [Medicago truncatula]
Length = 134
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+++FV GL+F T+E+ L AF +G +V+ ++V++K R +GF ++ +A EEE+R+A
Sbjct: 32 SKIFVKGLAFSTTEEKLAEAFSQYGNVVKADIVLNKAKKRCKGFGYVTFAEEEEARKAQI 91
Query: 138 GMHGKFLDGRVIFVEIA---KSRAELRQAFKNNPRQN 171
GM+GK L GRV++V++ + + +++QA KN N
Sbjct: 92 GMNGKILHGRVLYVDMDPPNEQKNKIKQATKNTEVDN 128
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQG R P++ + C ++LF+ GLS+ + SL++AF GFG +V+
Sbjct: 11 LRQGAARSTQAPVSSMLNYIR----CMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAK 66
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
++ D+ + R RGF F+ ++ +E + A+ M GK LDGR I V A R
Sbjct: 67 VITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLDGRSIRVSYANDR 115
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 55 RGACFP---LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVM 111
+GA P A P+ ++LS ++LF+ GL++ T E LR+AF FG+++EV ++
Sbjct: 12 KGALKPNRLAAAALPATYTLSRG-FSSKLFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQ 70
Query: 112 DKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
D+ R RGF F+ Y T++E+++A+E M G+ LDGR I V A R
Sbjct: 71 DRETGRSRGFGFVSYITDQEAQKAMEAMDGRVLDGRTIRVNYATQR 116
>gi|224104887|ref|XP_002313606.1| predicted protein [Populus trichocarpa]
gi|222850014|gb|EEE87561.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%)
Query: 64 LPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
L P P + ++FV GLSF ++E + AF FG+++E +VMDK RP+G+ F
Sbjct: 20 LYPQPLLFFSKGFSAKVFVKGLSFSSTEKKIAEAFSEFGEVIEAKIVMDKARKRPKGYGF 79
Query: 124 LRYATEEESRRAIEGMHGKFLDGRVIFV 151
+ +A ++ + +A EGM+GK LDGR I+V
Sbjct: 80 VTFAKKDAAEKACEGMNGKLLDGRAIYV 107
>gi|15239958|ref|NP_196239.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|9759319|dbj|BAB09686.1| unnamed protein product [Arabidopsis thaliana]
gi|17065276|gb|AAL32792.1| Unknown protein [Arabidopsis thaliana]
gi|20260002|gb|AAM13348.1| unknown protein [Arabidopsis thaliana]
gi|21593170|gb|AAM65119.1| unknown [Arabidopsis thaliana]
gi|332003601|gb|AED90984.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 146
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 60/83 (72%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GLSF T+E L AF GQ+VE +VMD++++R +GF F+ +A+ +E+++A+
Sbjct: 34 SKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALM 93
Query: 138 GMHGKFLDGRVIFVEIAKSRAEL 160
+G+ L+GR IFV+ AK++ L
Sbjct: 94 EFNGQQLNGRTIFVDYAKAKQSL 116
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 61 AMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 61 AMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 61 AMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 61 AMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|223942615|gb|ACN25391.1| unknown [Zea mays]
Length = 120
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 61 AMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|297819134|ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
gi|297323288|gb|EFH53709.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
Length = 102
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 58/82 (70%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFVS LS T++ SLR F FGQ+ E L+ D RP+GF F+ + +E+++R+A++
Sbjct: 8 QLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDARKALKS 67
Query: 139 MHGKFLDGRVIFVEIAKSRAEL 160
+ GK ++GR+IFVE+AKS E+
Sbjct: 68 LDGKIVEGRLIFVEVAKSSEEV 89
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E SL AF +G + + +++MD+ RPRGF F++Y E+++ A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+EGM+G+ LDGR I V A
Sbjct: 63 MEGMNGQSLDGRTIRVNEA 81
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E SL AF +G + + +++MD+ RPRGF F++Y E+++ A
Sbjct: 3 DEGKLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+EGM+G+ LDGR I V A
Sbjct: 63 MEGMNGQSLDGRTIRVNEA 81
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 55/79 (69%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E+SL AF +G + +V+++ DK R RGF F++Y E+++ A
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+EGM+GK +DGR I V+ A
Sbjct: 63 LEGMNGKSVDGRTIRVDEA 81
>gi|224097630|ref|XP_002311019.1| predicted protein [Populus trichocarpa]
gi|222850839|gb|EEE88386.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Query: 79 RLFVS-GLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LF++ GLSF TSE +LR AF+GFG+LVEV ++MDKI+ R +G+AF+ Y TEE + A++
Sbjct: 266 KLFITAGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFVEYTTEEAASAALK 325
Query: 138 GMHGK 142
M+GK
Sbjct: 326 EMNGK 330
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 57/86 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TE+
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 61 AMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|399931803|gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumbaginifolia]
Length = 144
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 61 LACLPPSPHSLSTCQ-PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPR 119
++ P P L + T+LFV GLS+ T + SLR+AF FG +V+ +++D+ + RPR
Sbjct: 20 VSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRPR 79
Query: 120 GFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
GF F+ ++ +E + AI+ M G+ L GR I V IA+ RA
Sbjct: 80 GFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQERA 118
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 58/86 (67%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T ++SL +AF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MAASDVEYRCFVGGLAWATDDNSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 61 AMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|30683481|ref|NP_565646.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|106879155|gb|ABF82607.1| At2g27330 [Arabidopsis thaliana]
gi|330252880|gb|AEC07974.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 116
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 65/91 (71%), Gaps = 7/91 (7%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+ LFV G+SF ++E++L AF +GQ+++V+++MDKI RP+GFA++ ++++EE+ +A+
Sbjct: 21 STLFVKGISFSSTEETLTQAFSQYGQVLKVDVIMDKIRCRPKGFAYVTFSSKEEAEKALL 80
Query: 138 GMHGKFLDGRVIFVEIAKSRAELRQAFKNNP 168
++ + +DGRV+ ++ K A K+NP
Sbjct: 81 ELNAQLVDGRVVILDTTK-------AAKHNP 104
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
gi|222838844|gb|EEE77195.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ R ++ PS + C +++F+ G+SF+T ++ L+ AF +G +VE
Sbjct: 11 LRQTANRQITSEISASRPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEGI 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
++MD+ R RGF F+ Y + EE+ AI+ M G+ L GR + V A R
Sbjct: 71 IIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATER 119
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQG R P+A + C ++LF+ GLS+ + SL++AF GFG +V+
Sbjct: 11 LRQGAARSTHAPVASMLNYIR----CMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAK 66
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
++ D+ + R RGF F+ ++ +E + A+ M GK L+GR I V A +
Sbjct: 67 VITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLNGRSIRVSYANDK 115
>gi|297826049|ref|XP_002880907.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326746|gb|EFH57166.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 65/91 (71%), Gaps = 7/91 (7%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+ LFV G+SF ++E++L AF +GQ++ V+++MDKI RP+G A++ ++++EE+ +A+
Sbjct: 21 STLFVKGISFSSTEETLTQAFSQYGQVLRVDVIMDKIRCRPKGIAYVTFSSKEEAGKALL 80
Query: 138 GMHGKFLDGRVIFVEIAKSRAELRQAFKNNP 168
++G+ +DGRV+ ++I K A K+NP
Sbjct: 81 ELNGRLVDGRVVILDITK-------AGKHNP 104
>gi|297806641|ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
gi|297317041|gb|EFH47463.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 59/80 (73%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GLSF T+E L AF GQ+VE +VMD++++R +GF F+ +A+ +E+++A+
Sbjct: 34 SKLFVGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASVDEAQKALM 93
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
+G+ +GRVIFV+ AK++
Sbjct: 94 EFNGQQFNGRVIFVDYAKAK 113
>gi|223974749|gb|ACN31562.1| unknown [Zea mays]
Length = 326
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 57/87 (65%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKSR 157
R AIEGM+GK LDGR I V A+ R
Sbjct: 61 AMRNAIEGMNGKELDGRNITVNEAQFR 87
>gi|198282085|ref|NP_001105572.1| glycine-rich RNA binding protein [Zea mays]
gi|2668742|gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
gi|194692162|gb|ACF80165.1| unknown [Zea mays]
gi|195623052|gb|ACG33356.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 145
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 57/86 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TE+
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 61 AMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 57/86 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TE+
Sbjct: 1 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 61 AMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLS+ T E SLR+AF +G++++ +++D+ R RGF F+ YA EE++
Sbjct: 27 CMSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQAS 86
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKNN 167
AI + GK L GR + V A R F+N+
Sbjct: 87 SAIMALDGKDLHGRNLRVSAATERT---SGFRND 117
>gi|20257689|gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 1 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 60
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
E+ R AIEGM+GK LDGR I V A+S
Sbjct: 61 EDAMRSAIEGMNGKELDGRNITVNEAQS 88
>gi|20257695|gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 3 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 62
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
E+ R AIEGM+GK LDGR I V A+S
Sbjct: 63 EDAMRSAIEGMNGKELDGRNITVNEAQS 90
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 2 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 61
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
E+ R AIEGM+GK LDGR I V A+S
Sbjct: 62 EDAMRSAIEGMNGKELDGRNITVNEAQS 89
>gi|20257715|gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
gi|20257721|gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 2 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 61
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
E+ R AIEGM+GK LDGR I V A+S
Sbjct: 62 EDAMRSAIEGMNGKELDGRNITVNEAQS 89
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 56/82 (68%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ R FV GL++ T + +L++AF FG++++ ++ D+ R RGF F+ +ATEE + A
Sbjct: 2 DEYRCFVGGLAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQAA 61
Query: 136 IEGMHGKFLDGRVIFVEIAKSR 157
IEGM+GK LDGR I V A+SR
Sbjct: 62 IEGMNGKELDGRSITVNQAQSR 83
>gi|20257711|gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 4 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 63
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
E+ R AIEGM+GK LDGR I V A+S
Sbjct: 64 EDAMRSAIEGMNGKELDGRNITVNEAQS 91
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T D+L AF FG++VE ++ D+ R RGF F+ +ATE+
Sbjct: 1 MASAEVEFRCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQ 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+G+ LDGR I V A+S
Sbjct: 61 AMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E+SL AF +G + +V+++ DK R RGF F++Y E+++ A
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
++GM+GK +DGR I V+ A
Sbjct: 63 LDGMNGKSVDGRTIRVDEA 81
>gi|242823058|ref|XP_002488014.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218712935|gb|EED12360.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 134
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 58/84 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++D+LR F+ FG + E ++ D+ NR RGF F+R+AT+ E+ AI+
Sbjct: 2 SKLFIGGLAWHTTDDTLRQGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFATDAEADAAID 61
Query: 138 GMHGKFLDGRVIFVEIAKSRAELR 161
GM+ + DGRVI V+ A + A R
Sbjct: 62 GMNNQEFDGRVIRVDRASNNASSR 85
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 9 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 68
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
E+ R AIEGM+GK LDGR I V A+S
Sbjct: 69 EDAMRSAIEGMNGKELDGRNITVNEAQS 96
>gi|20257669|gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 9 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 68
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
E+ R AIEGM+GK LDGR I V A+S
Sbjct: 69 EDAMRSAIEGMNGKELDGRNITVNEAQS 96
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 60 PLACLPPSPHSLSTCQ-PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
++ P P L + T+LFV GLS+ T + SLR+AF FG +V+ +++D+ + R
Sbjct: 19 AVSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRS 78
Query: 119 RGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
RGF F+ ++ +E + AI+ M G+ L GR I V IA+ RA
Sbjct: 79 RGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERA 118
>gi|20257691|gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 8 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 67
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
E+ R AIEGM+GK LDGR I V A+S
Sbjct: 68 EDAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|20257667|gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
gi|20257671|gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gi|20257677|gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gi|20257685|gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gi|20257703|gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gi|20257717|gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gi|20257719|gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 8 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 67
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
E+ R AIEGM+GK LDGR I V A+S
Sbjct: 68 EDAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|359479548|ref|XP_003632289.1| PREDICTED: cold-inducible RNA-binding protein-like [Vitis vinifera]
gi|296084877|emb|CBI28286.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 53/75 (70%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFV G+SF T+E +L AF FG++VE ++MDK RP+GFA++ + E+E+ +A+ M
Sbjct: 36 LFVKGISFSTTEKTLAEAFSQFGEVVEAKIIMDKRKLRPKGFAYVTFTREDEAEKALTEM 95
Query: 140 HGKFLDGRVIFVEIA 154
+GK +DGR + V+ A
Sbjct: 96 NGKVVDGRTVLVDYA 110
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 57/86 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TE+
Sbjct: 10 MAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 69
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 70 AMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 60 PLACLPPSPHSLSTCQ-PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
++ P P L + T+LFV GLS+ T + SLR+AF FG +V+ +++D+ + R
Sbjct: 19 AVSATSPMPSMLDAIRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRS 78
Query: 119 RGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
RGF F+ ++ +E + AI+ M G+ L GR I V IA+ RA
Sbjct: 79 RGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERA 118
>gi|15224298|ref|NP_181287.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20197470|gb|AAM15089.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21536972|gb|AAM61313.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|114050677|gb|ABI49488.1| At2g37510 [Arabidopsis thaliana]
gi|330254316|gb|AEC09410.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 142
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 53/74 (71%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFVSGLS T+ + L++AF FGQLV+ ++ D+ + R +GF F+ YAT E++ +A
Sbjct: 35 RLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDAEKAKAE 94
Query: 139 MHGKFLDGRVIFVE 152
M+ KFLDG VIFV+
Sbjct: 95 MNAKFLDGWVIFVD 108
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++T
Sbjct: 56 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFST 115
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
E+ R AIEGM+GK LDGR I V A+S
Sbjct: 116 EDAMRSAIEGMNGKELDGRNITVNEAQS 143
>gi|20257673|gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TE+ R AIEG
Sbjct: 3 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 62
Query: 139 MHGKFLDGRVIFVEIAKS 156
M+GK LDGR I V A+S
Sbjct: 63 MNGKELDGRNITVNEAQS 80
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 60 PLACLPPSPHSLSTCQ-PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
++ P P L + T+LFV GLS+ T + SLR+AF FG +V+ +++D+ + R
Sbjct: 19 AVSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRS 78
Query: 119 RGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
RGF F+ ++ +E + AI+ M G+ L GR I V IA+ RA
Sbjct: 79 RGFGFVNFSDDESANEAIKAMDGQELQGRNIRVTIAQERA 118
>gi|212546539|ref|XP_002153423.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210064943|gb|EEA19038.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 135
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 58/83 (69%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T++D+LR+ F+ FG + E ++ D+ NR RGF F+R++T+ E+ AIEG
Sbjct: 3 KLFIGGLAWHTTDDTLRSGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFSTDAEADAAIEG 62
Query: 139 MHGKFLDGRVIFVEIAKSRAELR 161
M+ + DGRVI V+ A + A R
Sbjct: 63 MNNQDFDGRVIRVDRASNNASSR 85
>gi|297793541|ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310490|gb|EFH40914.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 95
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 57/79 (72%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFVS LS T++ SLR F FGQ++E L+ D+ RP+GF F+ + +E++++ A++
Sbjct: 7 TQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDDAQNALK 66
Query: 138 GMHGKFLDGRVIFVEIAKS 156
++GK ++GR+IFVE AK
Sbjct: 67 ALNGKIVNGRLIFVEAAKE 85
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 49 LRQGRGRGACFPLACLPP---SPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLV 105
LRQ R L P + S+S+ P T+LF+ G+S+ T E SLR AF +G++V
Sbjct: 11 LRQTASRQVSSELRSSPSFFQAIRSMSSA-PSTKLFIGGVSYSTDEQSLREAFSKYGEVV 69
Query: 106 EVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+ ++MD+ R RGF F+ Y + EE+ AI+ + G+ L GR I V A R
Sbjct: 70 DARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|297827259|ref|XP_002881512.1| hypothetical protein ARALYDRAFT_902894 [Arabidopsis lyrata subsp.
lyrata]
gi|297327351|gb|EFH57771.1| hypothetical protein ARALYDRAFT_902894 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFVSGLS T+ + L++AF FGQLV+ ++ D+ R +GF F+ YAT E++ +A
Sbjct: 35 RLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRETGRSKGFGFVTYATIEDAEKAKAE 94
Query: 139 MHGKFLDGRVIFVE 152
M+ KFLDG VIFV+
Sbjct: 95 MNAKFLDGWVIFVD 108
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ A + +P ++ C T+LFV GLS+ T + SLR+AF FG +V+
Sbjct: 11 LRQSISGNAVSATSTMPSMLDAV-RCMS-TKLFVGGLSWGTDDQSLRDAFATFGDVVDAR 68
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+++D+ + R RGF F+ ++ +E + AI+ M G+ L GR I V IA+ RA
Sbjct: 69 VIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERA 118
>gi|162463657|ref|NP_001105707.1| glycine-rich protein1 [Zea mays]
gi|22293|emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++TEE
Sbjct: 1 MARSDVEYRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEE 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R IEGM+GK LDGR I V A+S
Sbjct: 61 RMRNRIEGMNGKELDGRNITVNEAQS 86
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLSF T+E+SL AF +G + +V+++ DK R RGF F++Y ++++ A
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+EGM+GK LDGR I V+ A
Sbjct: 63 LEGMNGKTLDGRAIRVDEA 81
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 66 PSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLR 125
PS C T+LFV GLS+ T + SLR+AF FG +V+ +++D+ + R RGF F+
Sbjct: 27 PSMFDAVRCMS-TKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVN 85
Query: 126 YATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
++ +E + AI+ M G+ L GR I V IA+ RA
Sbjct: 86 FSDDESANEAIKAMDGQELQGRNIRVSIAQERA 118
>gi|297736978|emb|CBI26179.3| unnamed protein product [Vitis vinifera]
Length = 156
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
TR+F+ GL T E SL+ AF FG++ +V + +KI+++P GFAF + TEE ++ A++
Sbjct: 64 TRIFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFAFAWFTTEESAQLAVK 123
Query: 138 GMHGKFLDGRVIFVEIAK 155
M GKF GR +FV+IAK
Sbjct: 124 MMDGKFFHGRFVFVKIAK 141
>gi|357150983|ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 108
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T +FVS LSF T+E+ L+N F FG + E L+ D RP+GF F++Y+++ + +A++
Sbjct: 26 TEIFVSKLSFYTTEEELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKYSSQVAAEKAVK 85
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M G+ + GR+IFVE AK R
Sbjct: 86 AMDGRIIRGRIIFVETAKER 105
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ + + PS + C ++LF+ GLS+ T + SLR AF +G+++E
Sbjct: 11 LRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEAR 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+++D+ R RGF F+ + + EE+ AI+ + G+ L GR + V A RA
Sbjct: 71 VIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 66 PSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLR 125
PS + C ++LFV GLS+ T + SLR+ F +G+++E +++D+ + R RGF F+
Sbjct: 19 PSVYQAIRCMS-SKLFVGGLSYGTDDHSLRDEFAKYGEVIEARIILDRESGRSRGFGFVT 77
Query: 126 YATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
Y + EE+ AI M GK LDGR I V A R
Sbjct: 78 YTSSEEASAAITAMDGKTLDGRSIRVNHANER 109
>gi|115481496|ref|NP_001064341.1| Os10g0321700 [Oryza sativa Japonica Group]
gi|110288867|gb|ABG66004.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638950|dbj|BAF26255.1| Os10g0321700 [Oryza sativa Japonica Group]
Length = 317
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ G+S+ T + SL+ AF +G+++E +++D+ R RGF F+ Y + +E+
Sbjct: 27 CMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAA 86
Query: 134 RAIEGMHGKFLDGRVIFVEIA 154
AI GM GK L GR++ V A
Sbjct: 87 AAITGMDGKDLQGRIVRVSYA 107
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ P T+LFV G+S+ T E SL +AF +GQ+++ ++MD+ + R +GF F+ Y T EE+
Sbjct: 39 SSTPNTKLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEA 98
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKSR 157
AI+ + G+ L GR + V A R
Sbjct: 99 SSAIQALDGQDLYGRRVGVNFANER 123
>gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931789|gb|AFP57444.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich protein [Nicotiana alata]
gi|399931809|gb|AFP57454.1| RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 60 PLACLPPSPHSLSTCQ-PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
++ P P L + T+LFV GLS+ T + SLR+AF FG +V+ +++D+ + R
Sbjct: 19 AVSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRS 78
Query: 119 RGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
RGF F+ ++ +E + AI+ M G+ L GR I V IA+ RA
Sbjct: 79 RGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQERA 118
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ P T+LF+ G+S+ T E SLR AF +G++V+ ++MD+ R RGF F+ Y + EE+
Sbjct: 37 SSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEA 96
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKSR 157
AI+ + G+ L GR I V A R
Sbjct: 97 SSAIQALDGQDLHGRPIRVNYANER 121
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ P T+LF+ G+S+ T E SLR AF +G++V+ ++MD+ R RGF F+ Y + EE+
Sbjct: 37 SSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEA 96
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKSR 157
AI+ + G+ L GR I V A R
Sbjct: 97 SSAIQALDGQDLHGRPIRVNYANER 121
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 56/82 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++L+V +SF+TSED LR+AF FG + +V + MDK+ RPRGFAF+ +T EE++ A E
Sbjct: 4 SKLYVGNMSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFVTMSTPEEAKIAAE 63
Query: 138 GMHGKFLDGRVIFVEIAKSRAE 159
++G L GR + V A+ + E
Sbjct: 64 KLNGVDLGGRALTVNEARPKEE 85
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 54/79 (68%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLSF T+EDSL AF +G + +V+++ DK R RGF F++Y E+++ A
Sbjct: 3 DEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
++ M+GK LDGR I V+ A
Sbjct: 63 LDAMNGKTLDGRAIRVDEA 81
>gi|399931791|gb|AFP57445.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 144
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 60 PLACLPPSPHSLSTCQ-PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
++ P P L + T+LFV GLS+ T + SLR+AF FG +V+ +++D + R
Sbjct: 19 AVSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDAGVIVDGDSGRS 78
Query: 119 RGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
RGF F+ ++ +E + AI+ M G+ L GR I V IA+ RA
Sbjct: 79 RGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQERA 118
>gi|195621182|gb|ACG32421.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV L++ T + SL NAF +G+++E +++D+ R RGF F+ ++TE+
Sbjct: 1 MAASDVEYRCFVGXLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTED 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 61 AMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|20257707|gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 8 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 67
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
E+ R AIEGM+GK LDGR I V A+S
Sbjct: 68 EDAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ + + PS + C ++LF+ GLS+ T + SLR AF +G+++E
Sbjct: 11 LRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEAR 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+++D+ R RGF F+ + + EE+ AI+ + G+ L GR + V A RA
Sbjct: 71 VIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 57/81 (70%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++D+LR F+ FGQ+ E +V D+ NR RGF F+R++++ ++ +A++
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAMD 61
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
M+ + DGR I V+ A RA
Sbjct: 62 AMNNQEFDGRTIRVDKASERA 82
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLSF T E +L++AF FG ++E +++D+ + R RGF F+ + + EE+
Sbjct: 28 CMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEAS 87
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRA 158
A+ M GK L GR I V A RA
Sbjct: 88 AAMTSMDGKELQGRNIRVNHANERA 112
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLSF T E +L++AF FG ++E +++D+ + R RGF F+ + + EE+
Sbjct: 28 CMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEAS 87
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRA 158
A+ M GK L GR I V A RA
Sbjct: 88 AAMTSMDGKELQGRNIRVNHANERA 112
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 54/79 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL+NAF +G +++ ++ D+ R RGF F+ +A++E R+AIE
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+G+ LDGR I V A+SR
Sbjct: 67 MNGQDLDGRNITVNEAQSR 85
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 66 PSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLR 125
PS + C ++LFV G+S++T + SLR+ F +GQ++E +++D+ + R RGF F+
Sbjct: 19 PSVYQAIRCMS-SKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVT 77
Query: 126 YATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
Y + EE+ AI + GK LDGR I V A +
Sbjct: 78 YTSSEEASAAITALDGKTLDGRSIRVNHANEK 109
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 58/93 (62%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLSF T+EDSL AF +G + +V+++ DK R RGF F++Y E+++ A
Sbjct: 3 DEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIAKSRAELRQAFKNNP 168
++ M+GK LDGR I V+ A R F + P
Sbjct: 63 LDAMNGKTLDGRAIRVDEAGKGGRARGGFSSGP 95
>gi|326490373|dbj|BAJ84850.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+++FV G+S+ T + SL +AF +GQ+ E ++MD+ + R RGF F+ + + EE+ AI
Sbjct: 31 SKVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRGFGFVTFTSSEEAGAAIT 90
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
GM GK L GR++ V A R
Sbjct: 91 GMDGKDLQGRIVRVSYAHDRG 111
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ + + PS + C ++LF+ GLS+ T + SLR AF +G+++E
Sbjct: 11 LRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFYKYGEVIEAR 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+++D+ R RGF F+ + + EE+ AI+ + G+ L GR + V A RA
Sbjct: 71 VIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120
>gi|399931801|gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
Length = 144
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 60 PLACLPPSPHSLST--CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANR 117
++ P P L C T+LFV GLS+ T + SLR+A FG +V+ +++D+ + R
Sbjct: 19 AVSATTPMPSMLDAFRCMS-TKLFVGGLSWGTDDQSLRDALATFGDVVDARVIVDRDSGR 77
Query: 118 PRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
RGF F+ ++ +E + AI+ M G+ L GR I V IA+ RA
Sbjct: 78 SRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVNIAQERA 118
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T D+L AF +G++VE +++D+ R RGF F+ +A+E+ + AIEG
Sbjct: 9 RCFVGGLAWATDSDALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMKDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAKS 156
M+G+ LDGR I V A+S
Sbjct: 69 MNGQNLDGRSITVNEAQS 86
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%)
Query: 60 PLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPR 119
L+ PS +LF+ G+S+ T E LR AF +G +++ ++MD+ R R
Sbjct: 22 DLSMSTPSLFQAIRSMSSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSR 81
Query: 120 GFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
GF F+ +AT EE+ A++ M K LDGR + V A RA
Sbjct: 82 GFGFITFATSEEASSALQAMDNKELDGRTVRVNYATERA 120
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 57/87 (65%)
Query: 70 SLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
S+++ + R FV GL++ T + +L AF +G++VE ++ D+ R RGF F+ +A+E
Sbjct: 36 SMASSDVEYRCFVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASE 95
Query: 130 EESRRAIEGMHGKFLDGRVIFVEIAKS 156
+ + AIEGM+G+ LDGR I V A+S
Sbjct: 96 QSMKDAIEGMNGQNLDGRNITVNEAQS 122
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL AF +G + + +++MD+ RPRGF F++Y E+++ A++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 139 MHGKFLDGRVIFVEIA 154
M+G+ LDGR I V A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLSF T+E+SL AF +G + +V+++ DK R RGF F++Y ++++ A
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+EGM+GK LDGR I V+ A
Sbjct: 63 LEGMNGKTLDGRAIRVDEA 81
>gi|357454121|ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355486389|gb|AES67592.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|388509994|gb|AFK43063.1| unknown [Medicago truncatula]
Length = 89
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFVS LSF T++ L + F FG L E L+ D+ RP+GF F+ Y +E E+ +A +
Sbjct: 7 TKLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARK 66
Query: 138 GMHGKFLDGRVIFVEIAK 155
++G+ +DGR+IFVE AK
Sbjct: 67 ALNGRIVDGRLIFVEHAK 84
>gi|323650232|gb|ADX97202.1| cold-inducible RNA-binding protein [Perca flavescens]
Length = 80
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 53/76 (69%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLSF T+E+SL AF FG + +V+++ D+ RGF F++Y E+++ A+EG
Sbjct: 3 KLFIGGLSFDTTEESLAAAFGKFGTIEKVDVIKDRDTGYSRGFGFVKYENSEDAKDAMEG 62
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDGR I V+ A
Sbjct: 63 MNGKTLDGRAIRVDEA 78
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL AF +G + + +++MD+ RPRGF F++Y E+++ A++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 139 MHGKFLDGRVIFVEIA 154
M+G+ LDGR I V A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL AF +G + + +++MD+ RPRGF F++Y E+++ A++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 139 MHGKFLDGRVIFVEIA 154
M+G+ LDGR I V A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL AF +G + + +++MD+ RPRGF F++Y E+++ A++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 139 MHGKFLDGRVIFVEIA 154
M+G+ LDGR I V A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL AF +G + + +++MD+ RPRGF F++Y E+++ A++
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 139 MHGKFLDGRVIFVEIA 154
M+G+ LDGR I V A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV G+S++T + SLR+ F +GQ++E +++D+ + R RGF F+ Y + EE+ AI
Sbjct: 30 SKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAIT 89
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
+ GK LDGR I V A +
Sbjct: 90 ALDGKTLDGRSIRVNHANEK 109
>gi|225440312|ref|XP_002263021.1| PREDICTED: glycine-rich RNA-binding protein blt801 [Vitis vinifera]
gi|297740398|emb|CBI30580.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P T LF+SGL+ RT+ + L FG++V +V D+ + +GF F++YAT ++ +
Sbjct: 33 PSTTLFISGLNKRTTSEKLNEEASKFGEVVHARVVTDRSSGYSKGFGFVKYATIAQAEQG 92
Query: 136 IEGMHGKFLDGRVIFVEIAKSR 157
I+G+ +FLDG VIF E A+SR
Sbjct: 93 IKGLDAQFLDGWVIFAEFARSR 114
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV G+S++T + SLR+ F +GQ++E +++D+ + R RGF F+ Y + EE+ AI
Sbjct: 30 SKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAIT 89
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
+ GK LDGR I V A +
Sbjct: 90 ALDGKTLDGRSIRVNHANEK 109
>gi|406944721|gb|EKD76419.1| hypothetical protein ACD_43C00118G0001 [uncultured bacterium]
Length = 84
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 54/80 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T LFV G++F++++D+LR AF G +V ++MDK+ R RGF F+ +T EE++ AI+
Sbjct: 3 TNLFVGGIAFKSTDDTLREAFMQAGNVVSAKIIMDKMTGRSRGFGFVEMSTPEEAQAAIQ 62
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
GK LDGR I V+ A+ R
Sbjct: 63 MWDGKELDGRRIAVKEAQPR 82
>gi|351724633|ref|NP_001238088.1| uncharacterized protein LOC100527061 [Glycine max]
gi|255631468|gb|ACU16101.1| unknown [Glycine max]
Length = 113
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 55/76 (72%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+++FV GL+F T+E+ L AF +G +++ N++++K NR +GF ++ +A EEE+ +A
Sbjct: 33 SKVFVKGLAFSTTEEELAKAFSQYGSVLKANIILNKAKNRSKGFGYVIFAKEEEACKAQI 92
Query: 138 GMHGKFLDGRVIFVEI 153
M+GK L GRVI+V++
Sbjct: 93 DMNGKILHGRVIYVDV 108
>gi|1009363|dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
Length = 144
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 8/113 (7%)
Query: 49 LRQ---GRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLV 105
LRQ G A P+ + + +ST +LFV GLS+ T + SLR+AF FG +V
Sbjct: 11 LRQSISGNAVSATSPMKSMLDAVRCMST-----KLFVGGLSWGTDDQSLRDAFATFGDVV 65
Query: 106 EVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+ +++D+ + R RGF F+ ++ +E + AI+ M G+ L GR I V IA+ RA
Sbjct: 66 DARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVRIAQERA 118
>gi|116791319|gb|ABK25933.1| unknown [Picea sitchensis]
Length = 221
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 49 LRQG-RGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEV 107
LRQG GR +P H+L +RLF+ GLS+ + SLR +F +G+++E
Sbjct: 11 LRQGISGRLGFNETRSVPSIYHAL-RYMSSSRLFIGGLSYGMDDQSLRESFTEYGEVIEA 69
Query: 108 NLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
++ D+ R RGF F+ + + EE+ AI GM GK L GR++ V A R
Sbjct: 70 RIIHDRETGRSRGFGFISFTSNEEAAAAITGMDGKDLHGRLVHVNYATER 119
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+TRL+V L FR SE+ LR F+ +GQ+ E+NL++DK+ + RGFAF+ T + ++ AI
Sbjct: 3 RTRLYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFVTMETSQAAQSAI 62
Query: 137 EGMHGKFLDGRVIFVEIAKSRAE 159
+ ++G + GR I V AK R E
Sbjct: 63 DSLNGTSISGRQIVVNEAKPREE 85
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV G+S+ T + SLR +F +G++++V ++MD+ R RGF F+ +AT E++ AI+G
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAIQG 100
Query: 139 MHGKFLDGRVIFVEIAKSRA 158
M G+ L GR I V A R+
Sbjct: 101 MDGQDLHGRRIRVNYATERS 120
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF FG+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+GK LDGR I V A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQG + + P+ + S +S+ +LFV GLS+ T + SL+ AF FG++ E
Sbjct: 11 LRQGVSQSSNGPVTSMLGSLRYMSS-----KLFVGGLSWGTDDSSLKQAFTSFGEVTEAT 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
++ D+ R RGF F+ ++ E+ + AI+ M GK L+GR I V +A R+
Sbjct: 66 VIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERS 115
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF FG+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+GK LDGR I V A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL + T + SL+NAF +G +++ ++ D+ R RGF F+ +A++E R+AIE
Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+G+ LDGR I V A+SR
Sbjct: 67 MNGQDLDGRNITVNEAQSR 85
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T + L++AF FG++++ ++ D+ R RGF F+ +A+E+ R
Sbjct: 2 AEVEYRCFVGGLAWATDDRGLQDAFSSFGEIIDSKIINDRETGRSRGFGFVTFASEQSMR 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKS 156
AIEGM+GK LDGR I V A+S
Sbjct: 62 DAIEGMNGKDLDGRNITVNEAQS 84
>gi|361067297|gb|AEW07960.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
Length = 84
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 52/70 (74%)
Query: 91 EDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIF 150
E +L AF FG++VEV +VMD+++ R +GF F++YA+E ++ RA M+GK L GR+IF
Sbjct: 1 EKALTEAFSRFGEVVEVKIVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLSGRIIF 60
Query: 151 VEIAKSRAEL 160
V+ K++++L
Sbjct: 61 VDDVKAKSQL 70
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 57/86 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T + SL AF FG+++E ++ D+ R RGF F+ +++E+
Sbjct: 1 MASAEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+G+ LDGR I V A+S
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
Length = 117
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF FG+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+GK LDGR I V A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ GLS+ T++DSL++AF GFG +V ++ D+ R RGF F+ +++ + +
Sbjct: 32 CMSSSKLFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRGFGFVDFSSVDSAS 91
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRA 158
A+ M G+ L GR I V A RA
Sbjct: 92 SALSAMDGQELHGRNIRVSYATERA 116
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV G+S+ T + SLR +F +G++++V ++MD+ R RGF F+ +AT E++ AI+G
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQG 100
Query: 139 MHGKFLDGRVIFVEIAKSRA 158
M G+ L GR I V A R+
Sbjct: 101 MDGQDLHGRRIRVNYATERS 120
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV G+S+ T + SLR +F +G++++V ++MD+ R RGF F+ +AT E++ AI+G
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQG 100
Query: 139 MHGKFLDGRVIFVEIAKSRA 158
M G+ L GR I V A R+
Sbjct: 101 MDGQDLHGRRIRVNYATERS 120
>gi|425781282|gb|EKV19258.1| hypothetical protein PDIG_04180 [Penicillium digitatum PHI26]
gi|425783364|gb|EKV21218.1| hypothetical protein PDIP_08850 [Penicillium digitatum Pd1]
Length = 162
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 54/80 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GLS+ TS+D+LR FQ FG++ E +V D+ R RGF F+R+AT+ E+ A+
Sbjct: 2 SKLFVHGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATLRSRGFGFVRFATDAEADSALG 61
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M+ + DGRVI V+ A R
Sbjct: 62 AMNNQEFDGRVIRVDKAFDR 81
>gi|296088109|emb|CBI35498.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GLS+ TS+ SL+ AF+ FG LVE +V+DK + R RGF F+ + ++ AI+
Sbjct: 8 RCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKE 67
Query: 139 MHGKFLDGRVIFVEIAK 155
MHG LDGR I V+ A+
Sbjct: 68 MHGMDLDGRSITVDKAQ 84
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ G+++ EDSLR AF +G++VE +++D+ R RGF F+ + + E +
Sbjct: 36 CMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVETRVILDRETGRSRGFGFVTFTSSEAAS 95
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
AI+ + G+ L GRV+ V A R
Sbjct: 96 SAIQALDGRDLHGRVVKVNYANDR 119
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQG + P+ + S +S+ +LFV GLS+ T + SL+ AF FG++ E
Sbjct: 11 LRQGVSHSSNGPVTSMLGSLRYMSS-----KLFVGGLSWGTDDSSLKQAFTSFGEVTEAT 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
++ D+ R RGF F+ ++ E+ + AI+ M GK L+GR I V +A R+
Sbjct: 66 VIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERS 115
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 53/80 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLS+ T++DSL+ AF FG + E ++ D+ + R RGF F+ +A ++++ A++
Sbjct: 37 TKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMD 96
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M GK L+GR I V A R
Sbjct: 97 AMDGKELEGRSIRVNFANER 116
>gi|242046266|ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
gi|241924381|gb|EER97525.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
Length = 83
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 54/78 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T +FVS LSF T+E+ ++ F FG + E L+ D+ R +GF F++Y+++ E+ +A++
Sbjct: 6 TEIFVSRLSFYTTEEEFKDVFSSFGTVEEARLMRDQQTGRIKGFGFVKYSSQAEAEKAVK 65
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G+ L GR+IFVE+AK
Sbjct: 66 AMDGRILRGRLIFVEMAK 83
>gi|9757907|dbj|BAB08354.1| unnamed protein product [Arabidopsis thaliana]
Length = 112
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 58/86 (67%)
Query: 82 VSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHG 141
++GLS T++ SLR F FGQ+ E L+ D+ RP+GF F+ + +E+++++A++ ++G
Sbjct: 25 LAGLSAYTTDQSLRQLFAPFGQITESRLIKDQQTQRPKGFGFITFESEDDAQKALKALNG 84
Query: 142 KFLDGRVIFVEIAKSRAELRQAFKNN 167
K ++GR+IFVE AK + K+N
Sbjct: 85 KIVNGRLIFVETAKEVEAPTTSLKSN 110
>gi|242055377|ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLS+ + LR AF GFG + E ++ D+ + RGF F+ Y + + + AI
Sbjct: 37 TKLFVGGLSWGVDDMKLREAFSGFGDVTEARVITDRDTGKSRGFGFVNYTSSDAANAAIS 96
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
GM GK +DGR + V IA R
Sbjct: 97 GMDGKEIDGRPVRVNIANDR 116
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 56/84 (66%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T +++L+ AF +G++++ ++ D+ R RGF F+ + +EE R
Sbjct: 2 AETEYRCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
+AIE M+GK LDGR I V A+SR
Sbjct: 62 QAIEEMNGKELDGRNITVNEAQSR 85
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+GK LDGR I V A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|20257693|gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays]
Length = 153
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 6 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 65
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
+ R AIEGM+GK LDGR I V A+S
Sbjct: 66 XDAMRSAIEGMNGKELDGRNITVNEAQS 93
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+GK LDGR I V A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|118487563|gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Query: 43 FDSLFSL-RQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGF 101
F+ L SL RQ + P+ + S C ++LF+ GL + T + +L++AF GF
Sbjct: 4 FNKLGSLARQSISQKGQVPMVSMVNSIR----CMSSSKLFIGGLPWSTDDQTLKDAFSGF 59
Query: 102 GQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
G++ E ++MD+ R RGF F+ Y + E + A+ M G+ L GR + V A+ R
Sbjct: 60 GEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSAMDGQNLGGRTVRVSFAEER 115
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+GK LDGR I V A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|225463887|ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
vinifera]
gi|359493015|ref|XP_003634493.1| PREDICTED: uncharacterized protein LOC100256416 isoform 2 [Vitis
vinifera]
Length = 207
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GLS+ TS+ SL+ AF+ FG LVE +V+DK + R RGF F+ + ++ AI+
Sbjct: 8 RCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKE 67
Query: 139 MHGKFLDGRVIFVEIAK 155
MHG LDGR I V+ A+
Sbjct: 68 MHGMDLDGRSITVDKAQ 84
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G++++ ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+GK LDGR I V A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 65 PPSPHSLSTCQP-KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
P+P L+ + +RLFV GLS+ T + SL+ AF FG +V+ +++D+ + R RGF F
Sbjct: 25 SPTPAMLNAIRCMSSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGF 84
Query: 124 LRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+ ++ E+ ++ A+ M G+ L GR I V +A+ RA
Sbjct: 85 VNFSDEDCAKEAMNAMDGQQLHGRNIRVNLAQERA 119
>gi|145219698|ref|YP_001130407.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
gi|145205862|gb|ABP36905.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 90
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V L + SED LR+AF FGQ+ N++MDK + R +GF F+ + ++ +R AIE M
Sbjct: 3 IYVGNLPYTVSEDDLRDAFSEFGQVESANIIMDKFSGRSKGFGFVEMSDDDAAREAIEAM 62
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
H K GR I V AK R E
Sbjct: 63 HNKDFMGRSIMVNEAKPREE 82
>gi|116781810|gb|ABK22248.1| unknown [Picea sitchensis]
Length = 215
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P+ R FV GLS+ TS+ +L +AF FG L+E +V+D+ R RGF F+ + ++ A
Sbjct: 5 PEYRCFVGGLSWSTSDRTLEDAFHKFGHLIEAKVVVDRDTGRSRGFGFVTFDDKKSMEDA 64
Query: 136 IEGMHGKFLDGRVIFVEIAK 155
I+ MHG LDGR I V+ A+
Sbjct: 65 IDSMHGMSLDGRSITVDRAR 84
>gi|357152395|ref|XP_003576105.1| PREDICTED: uncharacterized protein LOC100823193 [Brachypodium
distachyon]
Length = 267
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C +++FV GLS+ T E LR AF +G +++ +++D + R RGF F+ YA E++++
Sbjct: 27 CMSSSKIFVGGLSYNTDETGLREAFTHYGDIIDAKIIVDHESRRSRGFGFITYAAEDQAK 86
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
AI + GK L GR I V A R
Sbjct: 87 AAIMALDGKELHGRNIRVSEANER 110
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T + SL AF +GQ++E ++ D+ R RGF F+ +++E+ R
Sbjct: 3 AEVEYRCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMR 62
Query: 134 RAIEGMHGKFLDGRVIFVEIAKS 156
AIEGM+G+ LDGR I V A+S
Sbjct: 63 DAIEGMNGQDLDGRNITVNEAQS 85
>gi|20257697|gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 2 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 61
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 62 XXXXRSAIEGMNGKELDGRNITVNEAQS 89
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 58/96 (60%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKN 166
AIE M+GK LDGR I V A+SR +++
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQSRGGGGGGWRD 96
>gi|302809382|ref|XP_002986384.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
gi|300145920|gb|EFJ12593.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
Length = 145
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GLS+ T++ +L +AF +G ++E +V+D+ R RGF F+ + E + AI+G
Sbjct: 3 RCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAIDG 62
Query: 139 MHGKFLDGRVIFVEIAK 155
MHGK LDGR I V A+
Sbjct: 63 MHGKDLDGRSITVSKAQ 79
>gi|296811816|ref|XP_002846246.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
gi|238843634|gb|EEQ33296.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
Length = 133
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T++D+LR+ F FG + E +V D+ NR RGF F+R++ E E+ A+
Sbjct: 5 KLFIGGLAWHTTDDTLRDGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSNESEADAALNA 64
Query: 139 MHGKFLDGRVIFVEIAKSRA 158
M+ + DGRVI V+ A R+
Sbjct: 65 MNNQEFDGRVIRVDKATERS 84
>gi|224128992|ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa]
gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
+RQ + P+A + S C ++LF+ GL++ T + SL++AF GFG++ E
Sbjct: 11 VRQSVSQNGQVPMASMLNSIR----CMSSSKLFIGGLAWSTDDQSLKDAFSGFGEVTEAR 66
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
++ D+ R RGF F+ Y + E + A+ M G+ L GR I V A +
Sbjct: 67 VITDRDTGRSRGFGFVSYESTESASEALSAMDGQELGGRNIRVGYATDK 115
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
Length = 143
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+S +TRL+V L FR SE+ LR F+ +GQ+ E+NL++DK+ + RGFAF+ + +
Sbjct: 40 MSVFMNRTRLYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQSRGFAFVTMESSQ 99
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKSRAE 159
++ AI ++G + GR I V AK R E
Sbjct: 100 AAQSAINNLNGSSVSGRQIVVNEAKPREE 128
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 54/79 (68%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLSF T+E+SL AF +G + +V+++ DK R RGF F++Y + E+++ A
Sbjct: 3 DEGKLFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ M+GK LDGR I V+ A
Sbjct: 63 MTAMNGKSLDGRAIRVDEA 81
>gi|15982739|gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|19699180|gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P+ R F+ GL++ TS+ LR+AF+ +G LVE +V+DK + R RGF F+ + ++
Sbjct: 4 DPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AI M+G LDGR I V+ A+
Sbjct: 64 AIAAMNGMDLDGRTITVDKAQ 84
>gi|387861097|gb|AFK08578.1| glycine-rich RNA binding protein 2c [Camelina sativa]
gi|387861103|gb|AFK08581.1| glycine-rich RNA binding protein 2c [Camelina sativa]
Length = 158
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLS+ T + SLR+AF FG++V+ +++D+ RPRGF F+ ++ E + AI
Sbjct: 36 TKLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRPRGFGFVNFSDETAASAAIS 95
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M GK L+GR I V A R
Sbjct: 96 EMDGKDLNGRNIRVNPANDR 115
>gi|361067299|gb|AEW07961.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126579|gb|AFG43909.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126581|gb|AFG43910.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126583|gb|AFG43911.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126585|gb|AFG43912.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126587|gb|AFG43913.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126589|gb|AFG43914.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126591|gb|AFG43915.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
Length = 84
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 51/70 (72%)
Query: 91 EDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIF 150
E +L AF FG++VEV +VMD+++ R +GF F++YA+E ++ RA M+GK L GR+IF
Sbjct: 1 EKALTEAFSRFGEVVEVKIVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLSGRIIF 60
Query: 151 VEIAKSRAEL 160
V+ K +++L
Sbjct: 61 VDDVKPKSQL 70
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLSF T+E+SL AF +G + +V+++ D+ + RGF F++Y E+++ A
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIAKSRAELRQAF 164
++GM+G+ LDGR I V+ A R F
Sbjct: 63 MDGMNGQTLDGRTIRVDEAGKGGRSRGNF 91
>gi|20257701|gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 8 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 67
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 68 XXXXRSAIEGMNGKELDGRNITVNEAQS 95
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T SL AF +G+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+GK LDGR I V A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 56/85 (65%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T + SL AF FG+++E ++ D+ R RGF F+ +++E+
Sbjct: 1 MASAEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQ 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
R AIEGM+G+ LDGR I V A+
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQ 85
>gi|20257681|gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 2 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 61
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 62 XXAMRSAIEGMNGKELDGRNITVNEAQS 89
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G++++ ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+GK LDGR I V A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 53/79 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL NAF+ FG++++ ++ D+ R RGF F+ + TE+ + AI
Sbjct: 5 RCFVGGLAWVTDDQSLENAFRSFGEILDAKVIPDRETGRSRGFGFVTFTTEQAMQNAINA 64
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+GK +DGR I V +A++R
Sbjct: 65 MNGKDIDGRTISVNMAQAR 83
>gi|356538787|ref|XP_003537882.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 170
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T D+L AF +G +VE ++ D+ R RGF F+ +A+E+
Sbjct: 1 MASADVEFRCFVGGLAWVTGNDALEKAFSIYGDIVESKVINDRETGRSRGFGFVTFASEQ 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+ AI GM+G+ LDGR I V A++RA
Sbjct: 61 SMKDAIAGMNGQDLDGRNITVNEAQTRA 88
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ G+++ EDSLR AF +G++V+ +++D+ R RGF F+ + + E +
Sbjct: 36 CMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAAS 95
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
AI+ + G+ L GRV+ V A R
Sbjct: 96 SAIQALDGRDLHGRVVKVNYANDR 119
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 57/98 (58%)
Query: 60 PLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPR 119
P+ +P + S T+LFV GLS+ T + SLR+AF FG++V+ +++D+ R R
Sbjct: 17 PIGNVPVTSMLGSLRLMSTKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSR 76
Query: 120 GFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
GF F+ + E + AI M GK L+GR I V +A R
Sbjct: 77 GFGFVNFNDEGAASAAISEMDGKDLNGRNIRVNVANER 114
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 8/108 (7%)
Query: 65 PPSPHSLSTCQPKTR-LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
P ++S+ Q + LFV LS+ E LRN F+ FG++ V +V D+ + R +GF +
Sbjct: 288 PKKVKTVSSAQEGAKNLFVGSLSWNVDEGWLRNEFEQFGEIAAVRVVTDRESGRSKGFGY 347
Query: 124 LRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKNNPRQN 171
+ Y T E +++A+E M GK +DGR I V+ + R E NPRQ+
Sbjct: 348 VEYTTNEAAKKALEEMKGKDIDGRTINVDFSAPRPE-------NPRQD 388
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV+ LSF E ++ F+GFG +V + + D + +P+GF +++Y + +R+A+E M
Sbjct: 404 VFVANLSFEADEQIVQTEFEGFGNIVGLRIPTDPESGQPKGFCYIQYDRVDSARKAVEEM 463
Query: 140 HGKFLDGRVIFVEIAKSR 157
+G + GR I + + R
Sbjct: 464 NGALVAGRAIRTDFSTPR 481
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T++ SL AF +G+++E ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEYRCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQ 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+G+ LDGR I V A+S
Sbjct: 61 SMRDAIEGMNGQTLDGRNITVNEAQS 86
>gi|293336981|ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
gi|223975005|gb|ACN31690.1| unknown [Zea mays]
gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein ZEAMMB73_633512 [Zea mays]
Length = 103
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 53/78 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T +FVS LSF T+E+ ++ F FG + E L+ D R +GF F++Y+++ E+ +A++
Sbjct: 21 TEIFVSRLSFYTTEEEFKDIFSPFGTVEEARLMRDHQTGRMKGFGFVKYSSQAEAEKAVK 80
Query: 138 GMHGKFLDGRVIFVEIAK 155
M GK L GR+IFVE+AK
Sbjct: 81 AMDGKILRGRLIFVEMAK 98
>gi|302814001|ref|XP_002988685.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
gi|300143506|gb|EFJ10196.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
Length = 135
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GLS+ T++ +L +AF +G ++E +V+D+ R RGF F+ + E + AI+G
Sbjct: 9 RCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAIDG 68
Query: 139 MHGKFLDGRVIFVEIAK 155
MHGK LDGR I V A+
Sbjct: 69 MHGKDLDGRSITVSKAQ 85
>gi|20257699|gb|AAM16015.1| glycine-rich RNA binding protein [Zea mays]
gi|20257705|gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 8 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 67
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 68 XXAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|20257679|gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T + SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 8 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 67
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 68 XXAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|222612603|gb|EEE50735.1| hypothetical protein OsJ_31052 [Oryza sativa Japonica Group]
Length = 118
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ G+S+ T + SL+ AF +G+++E +++D+ R RGF F+ Y + +E+
Sbjct: 27 CMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAA 86
Query: 134 RAIEGMHGKFLD 145
AI GM GK +D
Sbjct: 87 AAITGMDGKVMD 98
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GL++ TS+ L++AF+ +G+LVE +V+DK + R RGF F+ + +E AIE
Sbjct: 230 RCFIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEAMEEAIEA 289
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G LDGR I V+ A+
Sbjct: 290 MNGIDLDGRTITVDKAQ 306
>gi|116780918|gb|ABK21879.1| unknown [Picea sitchensis]
Length = 172
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 57/86 (66%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T + SL++AF FG+++E ++ D+ R RGF F+ ++ E+
Sbjct: 2 MASAEVEYRCFVGGLAWATDDRSLQDAFSPFGEILESKIISDRETGRSRGFGFVTFSDEQ 61
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AI+ M+GK LDGR I V A+S
Sbjct: 62 SMRDAIDAMNGKVLDGRNITVNPAQS 87
>gi|374584597|ref|ZP_09657689.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
gi|373873458|gb|EHQ05452.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
Length = 109
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
T+L+V GLS+ T++ +LR++F+ G + E +VMD+ + RGF F+ +A E +R AI
Sbjct: 2 STKLYVGGLSWDTTDTTLRHSFEAHGSVHEAIVVMDRYTGKSRGFGFVTFADENSARTAI 61
Query: 137 EGMHGKFLDGRVIFVEIAKSRA 158
M+G LDGR I V A+ R+
Sbjct: 62 SAMNGTDLDGRSITVSEAQERS 83
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T SL AF +G+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M GK LDGR I V A+SR
Sbjct: 69 MSGKELDGRNITVNEAQSR 87
>gi|90704785|dbj|BAE92287.1| putative glycine-rich RNA binding protein [Cryptomeria japonica]
Length = 181
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GLS+ T + SL++AF FG++++ +V D+ R RGF F+ + E+
Sbjct: 1 MASADVEFRCFVGGLSWSTDDRSLKDAFTAFGEVMDSKVVSDRETGRSRGFGFVTFMDEQ 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+G+ LDGR I V A++
Sbjct: 61 SMRDAIEGMNGRDLDGRNITVNRAQA 86
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T + +L+ AF +G++++ ++ D+ R RGF F+ + +EE R
Sbjct: 2 AETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
+AIE M+GK LDGR I V A+SR
Sbjct: 62 QAIEEMNGKELDGRSITVNEAQSR 85
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL+NAF +G +++ ++ D+ R RGF F+ +A++E R+AIE
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G+ LDGR I V A+
Sbjct: 67 MNGQDLDGRNITVNEAQ 83
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL+NAF +G +++ ++ D+ R RGF F+ +A++E R+AIE
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G+ LDGR I V A+
Sbjct: 67 MNGQDLDGRNITVNEAQ 83
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Query: 49 LRQGRGRGACFPLA----CLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQL 104
LRQG + L L + +S+ + +++FV G+SF T + SLR AF +G++
Sbjct: 11 LRQGANKRIGLDLHRSSLSLSQAVRWMSSMES-SKVFVGGISFSTDDQSLREAFTKYGEV 69
Query: 105 VEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+E +++D+ R RGF F+ Y + EE+ AI+ + G+ L GR + V A RA
Sbjct: 70 IEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDRA 123
>gi|299473131|emb|CBN78707.1| Peptidyl-prolyl cis-trans isomerase E [Ectocarpus siliculosus]
Length = 135
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
QPK ++V GL + +E+ L AF FG +VEVNL D +AN RGF F+ + EE+++
Sbjct: 5 AQPKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNLPKDHVANTHRGFGFVEFEVEEDAK 64
Query: 134 RAIEGMHGKFLDGRVIFVEIAK 155
AI+ M G L G+V+ V AK
Sbjct: 65 AAIDNMDGAELYGKVLRVNAAK 86
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T + +L AF FG++VE ++ D+ R RGF F+ + E+
Sbjct: 1 MAAADVEFRCFVGGLAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKSR 157
R AIEGM+G+ LDGR I V A+SR
Sbjct: 61 AMRDAIEGMNGQNLDGRNITVNEAQSR 87
>gi|239611503|gb|EEQ88490.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327348484|gb|EGE77341.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ATCC
18188]
Length = 143
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GL++ T++++LR F+ +G + E +V D+ NR RGF F+R+A++ E+ A+
Sbjct: 2 SKLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMN 61
Query: 138 GMHGKFLDGRVIFVEIAKSRAELR 161
M+ + DGRVI V+ A R+ R
Sbjct: 62 AMNNQEFDGRVIRVDKASDRSTQR 85
>gi|261205092|ref|XP_002627283.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
gi|239592342|gb|EEQ74923.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
Length = 143
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GL++ T++++LR F+ +G + E +V D+ NR RGF F+R+A++ E+ A+
Sbjct: 2 SKLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMN 61
Query: 138 GMHGKFLDGRVIFVEIAKSRAELR 161
M+ + DGRVI V+ A R+ R
Sbjct: 62 AMNNQEFDGRVIRVDKASDRSTQR 85
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 72 STCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEE 131
S QP T LFV LS+ T+ED L AF FG + V L D+ + +P+GF ++ + +E
Sbjct: 203 SESQPSTTLFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGDQEG 262
Query: 132 SRRAIEGMHGKFLDGRVIFVEIAK 155
+ +A E M GK LDGR + ++ ++
Sbjct: 263 ATKAYEAMKGKDLDGRTLRLDYSQ 286
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV LS+ D L FQG G +V + MD+ + + RGFA++ +++ E+++A+E M
Sbjct: 112 VFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVEEM 171
Query: 140 HGKFLDGRVIFVEIAKSR 157
+GK +DGR + V+I++ R
Sbjct: 172 NGKQIDGREVNVDISQPR 189
>gi|209735756|gb|ACI68747.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 81
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ +LFV GLSF T+E+SL AF +G + +V+++ DK R RGF F++Y E+++
Sbjct: 2 SDEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKD 61
Query: 135 AIEGMHGKFLDGRVIFV 151
A+EGM+GK +D +IFV
Sbjct: 62 ALEGMNGKSVD--LIFV 76
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Query: 49 LRQGRGRGACFPLA----CLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQL 104
LRQG + L L + +S+ + +++FV G+SF T + SLR AF +G++
Sbjct: 11 LRQGANKRIGLDLHRSSLSLSQAVRWMSSMES-SKVFVGGISFSTDDQSLREAFTKYGEV 69
Query: 105 VEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+E +++D+ R RGF F+ Y + EE+ AI+ + G+ L GR + V A RA
Sbjct: 70 IEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDRA 123
>gi|297814870|ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321156|gb|EFH51577.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P+ R F+ GL++ TS+ LR+AF+ +G LVE +V+DK + R RGF F+ + ++
Sbjct: 4 DPEYRCFIGGLAWSTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AI M+G LDGR I V+ A+
Sbjct: 64 AIAAMNGMDLDGRTITVDKAQ 84
>gi|125548231|gb|EAY94053.1| hypothetical protein OsI_15830 [Oryza sativa Indica Group]
Length = 113
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLF+ GLS +EDSL AF +GQ++E +V DK+ NRP+GF F+++A+EE + +A E
Sbjct: 38 RLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEE 97
Query: 139 MHGK 142
M+GK
Sbjct: 98 MNGK 101
>gi|388521117|gb|AFK48620.1| unknown [Lotus japonicus]
Length = 161
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 64/104 (61%), Gaps = 5/104 (4%)
Query: 55 RGACFPLACLPPSPHSLSTCQP-----KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNL 109
R C L L H+ + P +++FV GL+F T+ED L AF +G++++ ++
Sbjct: 41 REICGSLMSLSKLQHASPSQLPFLRTMTSKIFVKGLAFSTTEDKLAEAFSQYGKVLKADI 100
Query: 110 VMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEI 153
V+++ R +GF ++ +A EE++++A GM+ K L GRV++V++
Sbjct: 101 VLNRAKTRSKGFGYVTFAKEEDAQKAQIGMNRKILHGRVLYVDM 144
>gi|391348809|ref|XP_003748634.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Metaseiulus occidentalis]
Length = 381
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 58/97 (59%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ + +T P LF++ +++ TSE LR F+ +G + +V+L+ I+N+PRG
Sbjct: 85 IALWDPNNNPKATADPFKTLFIARINYETSEGKLRREFEQYGAIKQVSLIHSSISNKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+AF+ YA E + A + GK +D R + V++ + R
Sbjct: 145 YAFIEYAHERDMHAAYKHADGKKIDSRRVLVDVERGR 181
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLS+ T++ SL+ AF FG++ E ++ D+ R RGF F+ ++ EE++++A
Sbjct: 38 KLFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKKAASS 97
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M G+ LDGR + V A R
Sbjct: 98 MDGQELDGRSVRVNFANER 116
>gi|449516497|ref|XP_004165283.1| PREDICTED: glycine-rich RNA-binding protein 2-like, partial
[Cucumis sativus]
Length = 100
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%)
Query: 85 LSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFL 144
LS T+++ LR AF FGQL + +V D+ R +GFAF+ Y+T +E+ +A E M+ KFL
Sbjct: 1 LSRLTTDEKLREAFSSFGQLADAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAKFL 60
Query: 145 DGRVIFVEIAK 155
DG VIFV+ AK
Sbjct: 61 DGWVIFVDPAK 71
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ GL + + +L++AF GFG++ E ++MD+ R RGF F+ Y + E +
Sbjct: 32 CMSSSKLFIGGLPWSADDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENAS 91
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
A+ M G+ L GR + V A+ R
Sbjct: 92 EALSAMDGQNLGGRTVRVSFAEER 115
>gi|449433509|ref|XP_004134540.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 1 [Cucumis sativus]
gi|449490646|ref|XP_004158665.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 1 [Cucumis sativus]
Length = 158
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+RL V L + T+E L+ F FG++ EV L D+ RP+G+AF++Y ++++ A+E
Sbjct: 45 SRLMVRNLPYSTNESRLQEEFSNFGEIAEVLLAKDRSTKRPKGYAFIQYTCQDDAMLALE 104
Query: 138 GMHGKFLDGRVIFVEIA 154
M K DGR+I+VEIA
Sbjct: 105 TMDCKIFDGRMIYVEIA 121
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 56/86 (65%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T ++L AF +G+++E ++ D+ R RGF F+ + +E+
Sbjct: 1 MASAEIEFRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQ 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+G+ LDGR I V A+S
Sbjct: 61 AMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 56/86 (65%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T ++L AF +G+++E ++ D+ R RGF F+ + +E+
Sbjct: 1 MASAEIEFRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQ 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+G+ LDGR I V A+S
Sbjct: 61 AMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 58/93 (62%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
A P+ +S ++LFV GL++ T++D+++ AF FG++ EV ++ D+ R RGF
Sbjct: 26 AAAIPAMFLVSRGMSGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGF 85
Query: 122 AFLRYATEEESRRAIEGMHGKFLDGRVIFVEIA 154
F+ +AT++++ A++ + G+ L GR I V A
Sbjct: 86 GFVTFATDQDAEAALQALDGRDLAGRTIRVNYA 118
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 58/93 (62%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
A P+ +S ++LFV GL++ T++D+++ AF FG++ EV ++ D+ R RGF
Sbjct: 26 AAAIPAMFLVSRGMSGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGF 85
Query: 122 AFLRYATEEESRRAIEGMHGKFLDGRVIFVEIA 154
F+ +AT++++ A++ + G+ L GR I V A
Sbjct: 86 GFVTFATDQDAEAALQALDGRDLAGRTIRVNYA 118
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ + L+ PS +++FV G+S++T + SLR AF +G+++E
Sbjct: 11 LRQTATKQISNELSASRPSMFQAIRFMSSSKVFVGGISYQTDDTSLREAFGKYGEVIEAR 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+++D+ R RGFAF+ Y + EE+ AI+ + G+ L GR + V A R
Sbjct: 71 VIIDRETGRSRGFAFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDR 119
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T + +L+ AF +G++++ ++ D+ R RGF F+ + +EE R
Sbjct: 2 AETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
+AIE M+GK LDGR + V A+SR
Sbjct: 62 QAIEEMNGKELDGRQVTVNEAQSR 85
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS+ +L AF +G+++E ++ D+ R RGF F+ + E+
Sbjct: 1 MAAADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+G+ LDGR I V A+S
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS+ +L AF +G+++E ++ D+ R RGF F+ + E+
Sbjct: 1 MAAADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+G+ LDGR I V A+S
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|224059014|ref|XP_002299678.1| predicted protein [Populus trichocarpa]
gi|222846936|gb|EEE84483.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GLS+ TS+ L+ F+ FG L+E +V+DK + R RGF F+ + ++ AIEG
Sbjct: 8 RCFIGGLSWSTSDRGLKETFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEDAIEG 67
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G LDGR I V+ A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>gi|34851124|gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (64%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T D+L AF FG+++E ++ D+ R RGF F+ ++ E+
Sbjct: 1 MASAEIEFRCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
R AIEGM+G+ LDGR I V A+
Sbjct: 61 AMRDAIEGMNGQNLDGRNITVNEAQ 85
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 14/124 (11%)
Query: 51 QGRGRGACFPLACLPPSP------------HSLST-CQPKTRLFVSGLSFRTSEDSLRNA 97
+G+G GAC P + SP H +T + +LFV GLSF T+E SL
Sbjct: 14 RGKGHGAC-PRSVRGASPGGPVTPESSQAHHGKATMASDEGKLFVGGLSFDTNEQSLEQV 72
Query: 98 FQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
F +GQ+ EV +V D+ R RGF F+ + ++++ A+ M+GK +DGR I V+ A
Sbjct: 73 FSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKS 132
Query: 158 AELR 161
++ R
Sbjct: 133 SDNR 136
>gi|15231557|ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|9294301|dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana]
gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis thaliana]
gi|18377412|gb|AAL66872.1| unknown protein [Arabidopsis thaliana]
gi|62320797|dbj|BAD93728.1| RNA-binding protein [Arabidopsis thaliana]
gi|110742443|dbj|BAE99140.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332643635|gb|AEE77156.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 245
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P+ R F+ GL++ TS+ LR+AF+ +G LVE +V+DK + R RGF F+ + ++
Sbjct: 4 DPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AI M+G LDGR I V+ A+
Sbjct: 64 AIAAMNGMDLDGRTITVDKAQ 84
>gi|20257709|gb|AAM16020.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
++ + R FV GL++ T SL NAF +G+++E +++D+ R RGF F+ ++
Sbjct: 8 EEMAASDVEYRCFVGGLAWATDXHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSX 67
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+GK LDGR I V A+S
Sbjct: 68 XXAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|215697937|dbj|BAG92098.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 111
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P LF+SGLS RT+ D L+ AF FG+++ +V D++ +GF F+RYAT E++ +
Sbjct: 33 DPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAK 92
Query: 135 AIEGMHGKFLDGRVIFV 151
IEGM DG+V F+
Sbjct: 93 GIEGM-----DGKVCFI 104
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
AIE M+GK LDGR I V A+S
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
AIE M+GK LDGR I V A+S
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
AIE M+GK LDGR I V A+S
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
AIE M+GK LDGR I V A+S
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E
Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSEN 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
AIE M+GK LDGR I V A+S
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>gi|154279360|ref|XP_001540493.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412436|gb|EDN07823.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 149
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++D+LR F+ +G + E +V D+ NR RGF F+R+A++ E+ A+
Sbjct: 2 SKLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFASDAEADAAMN 61
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
M + DGRVI V+ A R+
Sbjct: 62 AMSNQEFDGRVIRVDKASDRS 82
>gi|294461052|gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 57/80 (71%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E LR+AF +G+++EV +++++ + +GF F+++A+E ++ A++
Sbjct: 36 KLFVGGLSFDTNEKVLRDAFSLYGEILEVRVIINRASGLSKGFGFVQFASETDAVNALKE 95
Query: 139 MHGKFLDGRVIFVEIAKSRA 158
M G+ LDGR I V A +RA
Sbjct: 96 MDGQSLDGRNIRVNFANTRA 115
>gi|225562488|gb|EEH10767.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|325092417|gb|EGC45727.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 136
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++D+LR F+ +G + E +V D+ NR RGF F+R+A++ E+ A+
Sbjct: 2 SKLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFASDAEADAAMN 61
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
M + DGRVI V+ A R+
Sbjct: 62 AMSNQEFDGRVIRVDKASDRS 82
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 55/86 (63%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T ++L AF +G++++ ++ D+ R RGF F+ +A E+
Sbjct: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIEGM+G+ +DGR I V A+S
Sbjct: 61 SMRDAIEGMNGQDMDGRNITVNEAQS 86
>gi|281209808|gb|EFA83976.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Polysphondylium
pallidum PN500]
Length = 432
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 57/97 (58%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
L P ++ ST P LFVS +S++TSE L+N F +G + ++ LV D++ +P+G
Sbjct: 81 LKQWDPHSNTKSTGDPYKTLFVSRISYKTSESKLKNEFSQYGPIKKIRLVTDQVTGKPKG 140
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+AF+ + E + + A + G+ +D R + V+I + R
Sbjct: 141 YAFIEFEKERDMKIAYKQADGQKIDDRRVLVDIERGR 177
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 56 GACFPLACLPPSPHSLSTCQP-------KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
G+ F + L S + ST T+LFV GLS+ T + SL++AF FG++VE
Sbjct: 8 GSLFRHSALASSASTGSTPAMFNAARLMSTKLFVGGLSWGTDDQSLKDAFTSFGEVVEAR 67
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
++ D+ + RGF F+ ++ ++++ A+ M G+ L+GR I V A R
Sbjct: 68 VITDRDTGKSRGFGFVSFSNGDDAKNAMSSMDGQELEGRNIHVNFANER 116
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T++++L AF +G++VE ++ D+ R RGF F+ + E+ R AIEG
Sbjct: 7 RCFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 139 MHGKFLDGRVIFVEIAKS 156
M+G+ LDGR I V A+S
Sbjct: 67 MNGQDLDGRNITVNEAQS 84
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora indica
DSM 11827]
Length = 236
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ T++D+LR AF+ +G +V+ ++ D+ R RGF F+ Y++EEE+ AI G
Sbjct: 4 KIYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAISG 63
Query: 139 MHGKFLDGRVIFVEIAKSR 157
++ LDGR I V +A +R
Sbjct: 64 LNETSLDGRQIKVNLANAR 82
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ LS+ T+++SL++AF FG L E +V+DK + R RGF F+ + ++ AIEG
Sbjct: 8 RCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEG 67
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G LDGR I V+ A+
Sbjct: 68 MNGLDLDGRNITVDKAQ 84
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
++LF+ GL++ T E++LR+AF FG + EV +++D+ R RGF F+ + + EE+ A
Sbjct: 43 SSSKLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVA 102
Query: 136 IEGMHGKFLDGRVIFVEIAKSRA 158
++ M G+ L GR I V+ A +A
Sbjct: 103 LQEMDGRELAGRQIRVDYATDKA 125
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 66 PSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLR 125
P+ +S C +++FV GLS+ + +LR +F FG ++E ++ D+ R RGF F+
Sbjct: 28 PAIYSAFRCMS-SKVFVGGLSYGVDDQTLRESFATFGDVMEAKIINDRETGRSRGFGFVT 86
Query: 126 YATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+A+ +E+ A+E M GK L GR I V IA+ R
Sbjct: 87 FASPDEANAAVEAMDGKDLQGRSIRVNIAQER 118
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T L AF +G +VE ++ D+ R RGF F+ +A+E+
Sbjct: 1 MASADVEYRCFVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASED 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
R AIEGM+G+ LDGR I V A+
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQ 85
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
+CL L + T ++V LSF+ +E+ LR AF+ +G++ VN++MD+ R RGF
Sbjct: 41 SCLVGD--GLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGF 98
Query: 122 AFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
AF+ A E ++ AIE ++G +DGR + V A+ R
Sbjct: 99 AFVEMADAEGAKDAIENLNGHEIDGRSVTVNEARPR 134
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
+CL L + T ++V LSF+ +E+ LR AF+ +G++ VN++MD+ R RGF
Sbjct: 41 SCLVGD--GLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGF 98
Query: 122 AFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
AF+ A E ++ AIE ++G +DGR + V A+ R
Sbjct: 99 AFVEMADAEGAKDAIENLNGHEIDGRSVTVNEARPR 134
>gi|387861093|gb|AFK08576.1| glycine-rich RNA binding protein 2a [Camelina sativa]
gi|387861099|gb|AFK08579.1| glycine-rich RNA binding protein 2a [Camelina sativa]
Length = 160
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLS+ T + SLR+AF FG++V+ +++D+ R RGF F+ ++ E + AI
Sbjct: 36 TKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAIS 95
Query: 138 GMHGKFLDGRVIFVEIAKSRAELRQAF 164
M GK L+GR I V A R +A+
Sbjct: 96 EMDGKDLNGRNIRVNQANDRPSAPRAY 122
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
+CL L + T ++V LSF+ +E+ LR AF+ +G++ VN++MD+ R RGF
Sbjct: 41 SCLVGD--GLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGF 98
Query: 122 AFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
AF+ A E ++ AIE ++G +DGR + V A+ R
Sbjct: 99 AFVEMADAEGAKDAIENLNGHEIDGRSVTVNEARPR 134
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 55/80 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+++V LS+ T++D+LR AF +GQ+V+ ++ D+ R RGF F+ +++E+E+ AI
Sbjct: 3 TKVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAIN 62
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
+H + LDGR I V +A +R
Sbjct: 63 SLHEQDLDGRRIKVNLANAR 82
>gi|304376936|gb|ACI70007.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 82
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ +LFV GLSF T+E+SL AF +G + +V+++ DK R RGF F++Y E+++
Sbjct: 2 SDEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKD 61
Query: 135 AIEGMHGKFLDGRVIFV 151
A++GM+GK +D +IFV
Sbjct: 62 ALDGMNGKSVD-LMIFV 77
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQG + + P++ + +S+ ++LF+ GLS+ + SL++AF +G++VE
Sbjct: 11 LRQGATQSSHAPVSSMLNYLRHMSS----SKLFIGGLSYGVDDQSLKDAFASYGEVVEAR 66
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
++ D+ R RGF F+ + ++E + A+ M G+ L+GR I V A R
Sbjct: 67 VITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDR 115
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + + R FV GL++ T + SL +AF FG+++E +V D+ R RGF F+ ++ E+
Sbjct: 1 MASAEIEFRCFVGGLAWATDDRSLHDAFSPFGEVLESKIVSDRETGRSRGFGFVTFSDEQ 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKSR 157
AIE M+GK LDGR I V A+SR
Sbjct: 61 AMMDAIEAMNGKELDGRNITVNQAQSR 87
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ LS+ T+++SL++AF FG L E +V+DK + R RGF F+ + ++ AIEG
Sbjct: 8 RCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEG 67
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G LDGR I V+ A+
Sbjct: 68 MNGLDLDGRNITVDKAQ 84
>gi|2293480|gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G+++E ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAK 155
M+GK LDGR I V A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ + +LFV GLSF T E SL F +GQ+ EV +V D+ R RGF F+ + E++
Sbjct: 2 SSSDEGKLFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPEDA 61
Query: 133 RRAIEGMHGKFLDGRVIFVEIA 154
+ A+E M+GK +DGR I V+ A
Sbjct: 62 KDAMEAMNGKSVDGRQIRVDQA 83
>gi|312283439|dbj|BAJ34585.1| unnamed protein product [Thellungiella halophila]
Length = 259
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P+ R F+ GL++ TS+ LR+AF+ +G L+E +V+DK + R RGF F+ + ++
Sbjct: 4 DPEYRCFIGGLAWSTSDRGLRDAFEKYGHLLEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AI M+G LDGR I V+ A+
Sbjct: 64 AIAAMNGMDLDGRTITVDKAQ 84
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ LS+ T+++SL++AF FG L E +V DK + R RGF F+ + ++ AIEG
Sbjct: 8 RCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEG 67
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G LDGR I V+ A+
Sbjct: 68 MNGLDLDGRAITVDKAQ 84
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R FV LS+ T+++SL++AF +G++ E +VMDK + R RGFAF+ + ++
Sbjct: 40 EDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEE 99
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AIE M+G L+GR I V+ A+
Sbjct: 100 AIEDMNGLDLEGRAITVDKAQ 120
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
+CL L + T ++V LSF+ +E+ LR AF+ +G++ VN++MD+ R RGF
Sbjct: 52 SCLVGD--GLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGF 109
Query: 122 AFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
AF+ A E ++ AIE ++G +DGR + V A+ R
Sbjct: 110 AFVEMADAEGAKDAIENLNGHEIDGRSVTVNEARPR 145
>gi|406907930|gb|EKD48603.1| RNA-binding protein [uncultured bacterium]
Length = 100
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V L + +EDSLR F+ FG + +V+D+I+ R +GFAF+ + +EE AIE +
Sbjct: 3 IYVGNLPYSITEDSLRELFEQFGDVSSTKVVVDQISGRSKGFAFVDMSNDEEGEAAIEKL 62
Query: 140 HGKFLDGRVIFVEIAKSRA 158
+G LDGR I V AK RA
Sbjct: 63 NGHELDGRTIVVNKAKPRA 81
>gi|297804134|ref|XP_002869951.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
lyrata]
gi|297315787|gb|EFH46210.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 57/92 (61%)
Query: 64 LPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
P S SL +++ V L F TSED L+ F FG++ EV L+ D+ R +G+AF
Sbjct: 26 FPKSKASLFNYPLASKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIRDESMKRSKGYAF 85
Query: 124 LRYATEEESRRAIEGMHGKFLDGRVIFVEIAK 155
+++ +++++ AIE M + +GR+I+++IAK
Sbjct: 86 IQFTSQDDAFLAIETMDRRMYNGRMIYIDIAK 117
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T+ ++L AF FGQ+++ ++ D+ R RGF F+ +++E+
Sbjct: 1 MAAADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQ 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
AIE M+GK LDGR I V A+S
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + SL+ AF +G++VE ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEFRCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQ 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AI+ M+GK LDGR I V A+S
Sbjct: 61 SMRDAIDAMNGKMLDGRSITVNPAQS 86
>gi|78186885|ref|YP_374928.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78166787|gb|ABB23885.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 90
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V L + SED LR+AF FG++ N++ DK + R +GF F+ ++ +R AIE M
Sbjct: 3 IYVGNLPYTISEDDLRDAFSEFGEVASANIITDKFSGRSKGFGFVEMPDDDAAREAIESM 62
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
H K GR I V AK R E
Sbjct: 63 HNKDFKGRSIMVNEAKPREE 82
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
Length = 269
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P + V LS+ ED +R+ F G+G +++V + D+ RPRG AF++YAT+ E+ A
Sbjct: 42 PGVSVLVRNLSWDAREDDVRDRFAGYGNILDVYMPKDRETGRPRGLAFVKYATQSEADAA 101
Query: 136 IEGMHGKFLDGRVIFVEIA----KSRAELRQA 163
++G G FL GR I EIA KSR E+R
Sbjct: 102 VDGGVGDFL-GREIRCEIATQQRKSRDEMRSG 132
>gi|255944269|ref|XP_002562902.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587637|emb|CAP85680.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 151
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 83 SGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
SGLS+ TS+D+LR FQ FG++ E +V D+ R RGF F+R+AT+ E+ A+ M+ +
Sbjct: 4 SGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATQRSRGFGFVRFATDAEADAALGAMNNQ 63
Query: 143 FLDGRVIFVEIAKSR 157
DGRVI V+ A R
Sbjct: 64 EFDGRVIRVDKAFDR 78
>gi|194466189|gb|ACF74325.1| unknown [Arachis hypogaea]
Length = 112
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
T L V+GLS+ T+E LR+AF+ G+L+EV ++ D + + +G+ F+R+ TE +
Sbjct: 29 HSSTNLLVTGLSYDTNETVLRDAFEQHGELIEVKVICDHVTGKSKGYGFVRFTTETSAAT 88
Query: 135 AIEGMHGKFLDGRVIFVEIAKSRA 158
+ MH K +DGR I V A +A
Sbjct: 89 GRKEMHKKIIDGRRIRVCYAHKQA 112
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 53/79 (67%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLSF T+E SL +AF +G + V++ ++ NR RGF F+ + ++++ A
Sbjct: 3 DEGKLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+EGM+GK +DGR I V+ A
Sbjct: 63 LEGMNGKSVDGRTIRVDEA 81
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 169
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T E SL AF FG+LV+ ++ D+ R RGF F+ + E+ + AIEG
Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G+ LDGR I V A+
Sbjct: 69 MNGQDLDGRSITVNEAQ 85
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
L+ G G+ L+ S ++LFV GLS+ T E SL+ F +G+++E
Sbjct: 11 LKHGVGKNTNLELSASNGSLFQTIRSMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEAR 70
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+++D+ R RGF F+ + + EE+ A++ M G+ L GR I V A +
Sbjct: 71 VILDRETGRSRGFGFISFPSSEEATSAMQAMDGQDLHGRRIKVNYATEK 119
>gi|357454123|ref|XP_003597342.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355486390|gb|AES67593.1| Cold-inducible RNA-binding protein [Medicago truncatula]
Length = 142
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 84 GLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKF 143
GLSF T++ L + F FG L E L+ D+ RP+GF F+ Y +E E+ +A + ++G+
Sbjct: 66 GLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARKALNGRI 125
Query: 144 LDGRVIFVEIAKSR 157
+DGR+IFVE AK +
Sbjct: 126 VDGRLIFVEHAKPK 139
>gi|223973531|gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
T+LF+ GL + + LR AF FG++ E ++ D+ R RGF F+ Y+ + ++ AI
Sbjct: 36 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 95
Query: 137 EGMHGKFLDGRVIFVEIAKSR 157
M GK +DGR + V +A R
Sbjct: 96 SAMDGKEIDGRQVRVNMANER 116
>gi|356550257|ref|XP_003543504.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
Length = 86
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV LSF T+++ L+ F FG + + +L +D I RP+GF F+ + +E E+ +A +
Sbjct: 7 TKLFVHRLSFYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIEAEKACK 66
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M+G+ ++GR+I VE A +
Sbjct: 67 AMNGRIVNGRLILVEPANEK 86
>gi|449507320|ref|XP_004162998.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 139
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T +SL AF +G++VE +V D+ R RGF F+ + EE
Sbjct: 1 MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEE 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
R AIE M+G LDGR I V A+
Sbjct: 61 AMRSAIEAMNGHILDGRNITVNEAQ 85
>gi|449462238|ref|XP_004148848.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507318|ref|XP_004162997.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 141
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T +SL AF +G++VE +V D+ R RGF F+ + EE
Sbjct: 1 MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEE 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
R AIE M+G LDGR I V A+
Sbjct: 61 AMRSAIEAMNGHILDGRNITVNEAQ 85
>gi|449462236|ref|XP_004148847.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507315|ref|XP_004162996.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 144
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T +SL AF +G++VE +V D+ R RGF F+ + EE
Sbjct: 1 MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEE 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
R AIE M+G LDGR I V A+
Sbjct: 61 AMRSAIEAMNGHILDGRNITVNEAQ 85
>gi|449462234|ref|XP_004148846.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 156
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T +SL AF +G++VE +V D+ R RGF F+ + EE
Sbjct: 1 MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEE 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
R AIE M+G LDGR I V A+
Sbjct: 61 AMRSAIEAMNGHILDGRNITVNEAQ 85
>gi|449462232|ref|XP_004148845.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507311|ref|XP_004162995.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 171
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T +SL AF +G++VE +V D+ R RGF F+ + EE
Sbjct: 1 MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEE 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
R AIE M+G LDGR I V A+
Sbjct: 61 AMRSAIEAMNGHILDGRNITVNEAQ 85
>gi|296421441|ref|XP_002840273.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636488|emb|CAZ84464.1| unnamed protein product [Tuber melanosporum]
Length = 91
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LF+ GL++ T +D+LR FQ FG + E +V D+ R RGF F+RY+++EE+ A++
Sbjct: 2 AKLFIGGLAWHTDDDALRQKFQEFGNVEEAVVVKDRDTGRSRGFGFVRYSSDEEATAAMD 61
Query: 138 GMHGKFLDGRVIFVEIAKSRAELR 161
M+ DGR I V+ A R + R
Sbjct: 62 NMNDVEFDGRRIRVDKASDRRQGR 85
>gi|387861095|gb|AFK08577.1| glycine-rich RNA binding protein 2b [Camelina sativa]
gi|387861101|gb|AFK08580.1| glycine-rich RNA binding protein 2b [Camelina sativa]
Length = 156
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV GLS+ T + SLR+AF FG++V+ +++D+ R RGF F+ ++ E + AI
Sbjct: 36 TKLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAIS 95
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M GK L+GR I V A R
Sbjct: 96 EMDGKDLNGRNIRVNPANDR 115
>gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661646|gb|AEE87046.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 92
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R FV GL++ T+++ L+ F FG +++ ++ D+ + R RGF F+ + E+ R
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 135 AIEGMHGKFLDGRVIFVEIAKSRA 158
AIE M+GK LDGRVI V A+SR
Sbjct: 63 AIEEMNGKELDGRVITVNEAQSRG 86
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R FV LS+ T+++SL++AF +G++ E +VMDK + R RGFAF+ + ++
Sbjct: 4 EDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEE 63
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AIE M+G L+GR I V+ A+
Sbjct: 64 AIEDMNGLDLEGRAITVDKAQ 84
>gi|315057077|ref|XP_003177913.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
gi|311339759|gb|EFQ98961.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T++D+LR F FG + E +V D+ NR RGF F+R+++E E+ A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSQFGTIEEAIVVKDRDTNRSRGFGFVRFSSEAEADAALNA 64
Query: 139 MHGKFLDGRVIFVEIA 154
M+ + DGRVI V+ A
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GLS+ T E SL+ AF +G ++E ++MD+ R RGF F+ + + EE+ A++
Sbjct: 40 SKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQ 99
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M G+ L GR I V A +
Sbjct: 100 AMDGQDLHGRRIRVNYATEK 119
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T+++SL AF FG + + ++ D+ R RGF F+ + E+ R
Sbjct: 2 AEVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMR 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKS 156
AIEGM+G+ LDGR I V A+S
Sbjct: 62 DAIEGMNGQELDGRNITVNEAQS 84
>gi|346978360|gb|EGY21812.1| glycine-rich RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 175
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 54/79 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T+E++LR+ F+ FG + E +V D+ R RGF F+RY+ +E++++AI+
Sbjct: 2 SKLFIGGLAWHTTEETLRSRFEEFGAVDEAVVVKDRDTGRSRGFGFVRYSQDEDAQKAID 61
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M+ DGR I V+ A
Sbjct: 62 AMNNVEFDGRTIRVDRASD 80
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 55/86 (63%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++ + R FV GL++ T+ ++L +AF FGQ+++ ++ D+ R RGF F+ +++E+
Sbjct: 1 MAAADVEYRCFVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQ 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
AIE M+GK LDGR I V A+S
Sbjct: 61 SMLDAIENMNGKELDGRNITVNQAQS 86
>gi|6911142|gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 55/86 (63%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T++ SL AF +G+++E ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
+ AIEGM+G+ LDGR + V A+S
Sbjct: 61 SMKDAIEGMNGQTLDGRNVTVNEAQS 86
>gi|259486065|tpe|CBF83611.1| TPA: glycine-rich RNA-binding protein, putative (AFU_orthologue;
AFUA_3G08580) [Aspergillus nidulans FGSC A4]
Length = 128
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LF+ GL++ T++D LR F +G + E +V D+ NR RGF F+R+A+E E+ A+
Sbjct: 2 AKLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMG 61
Query: 138 GMHGKFLDGRVIFVEIAKSRAELRQA 163
M+ + DGR+I V+ A R R
Sbjct: 62 AMNNQEFDGRIIRVDKASERPAARNG 87
>gi|217071940|gb|ACJ84330.1| unknown [Medicago truncatula]
Length = 211
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R FV GL++ TS+ LR+ F+ FG+L E +V+DK + R RGF F+ Y ++
Sbjct: 4 EDEYRCFVGGLAWSTSDRKLRDTFEKFGKLTEAKVVVDKFSGRSRGFGFVTYDEKKVMED 63
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AI+ M+G LDGR I V+ A+
Sbjct: 64 AIDAMNGIDLDGRTITVDRAQ 84
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 76 PKT-RLFVSGLSFRTSEDSLRNAFQGFGQLV-EVNLVMDKIANRPRGFAFLRYATEEESR 133
PKT ++FV+ LS+ T EDSL+ AF+ FG +V E+ L + + R RG A++++ TE+E+
Sbjct: 170 PKTDKVFVANLSYDTDEDSLKQAFEKFGTIVGEIGLPISRDTGRIRGIAYIQFETEDEAE 229
Query: 134 RAIEGMHGKFLDGRVI 149
A++GM+G +LDGR I
Sbjct: 230 AAVKGMNGVYLDGRPI 245
>gi|18415425|ref|NP_567594.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|51971865|dbj|BAD44597.1| putative protein [Arabidopsis thaliana]
gi|107738041|gb|ABF83619.1| At4g20030 [Arabidopsis thaliana]
gi|332658864|gb|AEE84264.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 152
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 53/78 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+++ V L F TSED L+ F FG++ EV L+ D+ R +G+AF+++ +++++ AIE
Sbjct: 40 SKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIE 99
Query: 138 GMHGKFLDGRVIFVEIAK 155
M + +GR+I+++IAK
Sbjct: 100 TMDRRMYNGRMIYIDIAK 117
>gi|241681381|ref|XP_002411590.1| SN-RNP U1, putative [Ixodes scapularis]
gi|215504330|gb|EEC13824.1| SN-RNP U1, putative [Ixodes scapularis]
Length = 405
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P ++ T P LFV+ +++ TSE LR F+ FG + ++ +V +KI +PRG
Sbjct: 85 IALWEPHNNAAGTVDPFKTLFVARVNYDTSESKLRREFEVFGSIKKIVIVHNKITGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+AF+ Y E + A + GK +DGR + V++ + R
Sbjct: 145 YAFVEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRT 182
>gi|21554348|gb|AAM63455.1| unknown [Arabidopsis thaliana]
Length = 152
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 53/78 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+++ V L F TSED L+ F FG++ EV L+ D+ R +G+AF+++ +++++ AIE
Sbjct: 40 SKIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMQRSKGYAFIQFTSQDDAFLAIE 99
Query: 138 GMHGKFLDGRVIFVEIAK 155
M + +GR+I+++IAK
Sbjct: 100 TMDRRMYNGRMIYIDIAK 117
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ R FV GL++ T++ SL AF FG++ + ++ D+ R RGF F+ +++ E + A
Sbjct: 3 EEYRCFVGGLAWATNDQSLEQAFSQFGEITDCKIINDRETGRSRGFGFVTFSSSESMKNA 62
Query: 136 IEGMHGKFLDGRVIFVEIAK 155
IEGM+G+ LDGR I V A+
Sbjct: 63 IEGMNGQDLDGRNITVNEAQ 82
>gi|427788187|gb|JAA59545.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 449
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P +S T P LFV+ +++ TSE LR F+ FG + ++ +V +KI +PRG
Sbjct: 85 IALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRREFEVFGPIKKIVIVHNKITGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+AF+ Y E + A + GK +DGR + V++ + R
Sbjct: 145 YAFVEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRT 182
>gi|356538789|ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 140
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +VE ++ D+ R RGF F+ +A+E
Sbjct: 1 MASAYVEYRCFVGGLAWATDDHALEKAFSHYGNIVESKIINDRETGRSRGFGFVTFASEN 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
+ AIEGM+G+ LDGR I V A+
Sbjct: 61 SMKDAIEGMNGQNLDGRNITVNEAQ 85
>gi|402086968|gb|EJT81866.1| hypothetical protein GGTG_01840 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 192
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY E++++RAI
Sbjct: 2 SKLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQRAIS 61
Query: 138 GMHGKFLDGRVIFVEIA 154
M+ DGR I V+ A
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|326474784|gb|EGD98793.1| glycine-rich RNA-binding protein [Trichophyton tonsurans CBS
112818]
Length = 149
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T++D+LR F FG + E +V D+ NR RGF F+R++++ E+ A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNA 64
Query: 139 MHGKFLDGRVIFVEIA 154
M+ + DGRVI V+ A
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|327301915|ref|XP_003235650.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326463002|gb|EGD88455.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 149
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T++D+LR F FG + E +V D+ NR RGF F+R++++ E+ A+
Sbjct: 5 KLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNA 64
Query: 139 MHGKFLDGRVIFVEIA 154
M+ + DGRVI V+ A
Sbjct: 65 MNNQEFDGRVIRVDKA 80
>gi|255568699|ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 126
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
H+ + P ++LFV+GLS+ E SL++AF FG++ EV ++ DK + R RGF F+ ++
Sbjct: 16 HNSPSPPPNSKLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSK 75
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIA 154
E E+ A + M GK L GR + + A
Sbjct: 76 ENEAVCAKDAMDGKALLGRPLRISFA 101
>gi|261351264|gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
Length = 202
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R F+ LS+ TS+ L++AF+ FG LV+ +V+DK + R RGF F+ + +
Sbjct: 4 EDEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDDKRAMED 63
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AIE M+G LDGR I V+ A+
Sbjct: 64 AIEAMNGMDLDGRAITVDKAQ 84
>gi|224071049|ref|XP_002303346.1| predicted protein [Populus trichocarpa]
gi|222840778|gb|EEE78325.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 16/127 (12%)
Query: 30 PAPATPFTIKRRDFDSLFSLR-QGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFR 88
P P+ I +R+F + +L+ + FPLA +R+ V+ +
Sbjct: 20 PIPSLANAISQRNFKNPKTLKLRASISNPNFPLA---------------SRIMVTNIGHS 64
Query: 89 TSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRV 148
SE +L+ F FG++ EV LV D+ R + +AF++Y +++++ A+E M K LDGR+
Sbjct: 65 ISEATLQKEFSNFGEIAEVKLVKDETIKRSKPYAFIQYTSQDDAILALENMDRKTLDGRL 124
Query: 149 IFVEIAK 155
IFV++AK
Sbjct: 125 IFVDLAK 131
>gi|328769422|gb|EGF79466.1| hypothetical protein BATDEDRAFT_89771 [Batrachochytrium
dendrobatidis JAM81]
Length = 327
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+ P +T +P LFVS LSF T+E +L++ F+ FG++ V++V D +PRG
Sbjct: 83 IDAWDPHKDENATAEPYKTLFVSRLSFDTTEKTLKHEFEAFGEVKSVSIVKDLKTGKPRG 142
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+AF+ + E + + A + G +DGR I V++ + R
Sbjct: 143 YAFIEFEHERDMKIAYKDAEGLKIDGRRILVDVERGRT 180
>gi|330920718|ref|XP_003299119.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
gi|311327336|gb|EFQ92795.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
Length = 171
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T + +LR F+ FGQ+ E +V D+ R RGF F+RYA + E+ A++
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
M+ + DGR I V+ A RA
Sbjct: 62 AMNNEEFDGRRIRVDKASDRA 82
>gi|189203945|ref|XP_001938308.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985407|gb|EDU50895.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 168
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T + +LR F+ FGQ+ E +V D+ R RGF F+RYA + E+ A++
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
M+ + DGR I V+ A RA
Sbjct: 62 AMNNEEFDGRRIRVDKASDRA 82
>gi|119177425|ref|XP_001240490.1| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
gi|320032129|gb|EFW14085.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392867546|gb|EAS29215.2| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
Length = 147
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++++LR F FG + E +V D+ NR RGF F+R+A+E E+ A+
Sbjct: 2 SKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMN 61
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M+ + DGR I V+ A R
Sbjct: 62 EMNNQEFDGRTIRVDKAADR 81
>gi|167383625|ref|XP_001736605.1| cold-inducible RNA-binding protein [Entamoeba dispar SAW760]
gi|165900936|gb|EDR27150.1| cold-inducible RNA-binding protein, putative [Entamoeba dispar
SAW760]
Length = 138
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 57/82 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
TRL++ L++ +++SLR AF+ FG + + +V D+ + R +GF F+ + +E++++AIE
Sbjct: 2 TRLYIGSLAYSVTDESLRAAFEKFGTVTDCKVVTDRESQRSKGFGFVTFEKDEDAKKAIE 61
Query: 138 GMHGKFLDGRVIFVEIAKSRAE 159
M+ + L+GR I V+++K R E
Sbjct: 62 EMNEQELEGRRIKVDVSKPREE 83
>gi|351722320|ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
gi|255628821|gb|ACU14755.1| unknown [Glycine max]
Length = 146
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
T+LFV+GLS+ T+E LR+AF G+++EV ++ D + + RG+ F+R+ +E +
Sbjct: 55 HSSTKLFVTGLSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFVSETTAAA 114
Query: 135 AIEGMHGKFLDGRVIFVEIA 154
A + M+G+ LDGR I V A
Sbjct: 115 ARKEMNGQILDGRRIRVSYA 134
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T++ SL AF +G ++E ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
R AIEGM+G+ LDGR I V A+
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQ 85
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G++++ ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAK 155
M+GK LDGR I V A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + SL AF +G++++ ++ D+ R RGF F+ +++E+ R AIEG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAK 155
M+GK LDGR I V A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|425765484|gb|EKV04163.1| hypothetical protein PDIP_88470 [Penicillium digitatum Pd1]
gi|425778342|gb|EKV16473.1| hypothetical protein PDIG_20660 [Penicillium digitatum PHI26]
Length = 136
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 53/81 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GLS+ T ++SLR F+ FG + + +V D+ R RGF F+R++T+EE+ A+
Sbjct: 2 SKLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDEEATAAMN 61
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
M+ + DGR I V+ A RA
Sbjct: 62 AMNNQEFDGRQIRVDKATERA 82
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 60 PLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPR 119
P +CL + + +LFV GLSF T+E SL F +GQ+ EV +V D+ R R
Sbjct: 23 PRSCL----WKAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSR 78
Query: 120 GFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELR 161
GF F+ + ++++ A+ M+GK +DGR I V+ A ++ R
Sbjct: 79 GFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNR 120
>gi|449494871|ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protein B-like [Cucumis
sativus]
Length = 95
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+ LF+S LS T+ + L+N F FG + E L+ D RP+GF F+ + + E+++A++
Sbjct: 7 SELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKALK 66
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M G+ +DGR+IFVE AK+
Sbjct: 67 AMDGRIVDGRLIFVEFAKT 85
>gi|422295561|gb|EKU22860.1| glycine-rich rna-binding protein 4 [Nannochloropsis gaditana
CCMP526]
Length = 186
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 56/105 (53%)
Query: 56 GACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIA 115
G P+A PP P S + +LFV LSFRT +LR AF+ FG++V ++ ++
Sbjct: 8 GVPAPVAEAPPRPTSPGQSEEGYKLFVGNLSFRTESAALREAFEPFGRIVFSTVIENRET 67
Query: 116 NRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAEL 160
+ RGF F+ Y + E+ AI M LDGR + V A+ R E
Sbjct: 68 GQSRGFGFVVYEQKHEADAAISRMDNAELDGRTLRVNFARPREEF 112
>gi|388511641|gb|AFK43882.1| unknown [Lotus japonicus]
Length = 211
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GL++ TS+ L++AF+ FG+L E +V+DK + R RGF F+ + ++ AI+
Sbjct: 8 RCFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDA 67
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G LDGR I V+ A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>gi|336272443|ref|XP_003350978.1| hypothetical protein SMAC_04282 [Sordaria macrospora k-hell]
gi|380090745|emb|CCC04915.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 192
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LFV GLS+ T ++ LR F+ FG + E +V D+ R RGF F+RYA + ++ AI
Sbjct: 2 AKLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYANDADAENAIA 61
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
M G+ DGR + V+ A RA
Sbjct: 62 NMDGQEFDGRRVRVDKASDRA 82
>gi|159482094|ref|XP_001699108.1| nuclear SR-like RNA binding protein [Chlamydomonas reinhardtii]
gi|158273171|gb|EDO98963.1| nuclear SR-like RNA binding protein [Chlamydomonas reinhardtii]
Length = 194
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 64 LPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAF 123
LPP+ + +P T+LFVSG+ FR SE L F FG++ E +V + + + RGFAF
Sbjct: 102 LPPA--DRTPPRPGTQLFVSGIDFRVSERELERKFSEFGRVKEARVVRNPFSGQSRGFAF 159
Query: 124 LRYATEEESRRAIEGMHGKFLDGRVIFVEIAKS 156
+ ++ +E+ RA MHG+ GR + VEIA++
Sbjct: 160 VGMSSTDEAERAARDMHGREWSGRRLQVEIARN 192
>gi|356519721|ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 137
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 63 CLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
C PPS S +LFV GLS+ SL+ AF FG + EV +V DK + R RGF
Sbjct: 29 CSPPSHAS------SNKLFVGGLSWSVDHKSLKEAFSSFGDVTEVTIVYDKDSGRSRGFG 82
Query: 123 FLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
F+ ++ E++++ A + M GK L GR + + A +A
Sbjct: 83 FVIFSNEDDAKCAKDAMDGKALLGRPLRINFALEKA 118
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ + +LFV GLSF T E +L F +GQ+ EV +V D+ R RGF F+ + E++
Sbjct: 2 SSSDEGKLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDA 61
Query: 133 RRAIEGMHGKFLDGRVIFVEIA 154
+ A+E M+GK +DGR I V+ A
Sbjct: 62 KDAMEAMNGKSVDGRQIRVDQA 83
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ T++D+LR AF FG +V+ ++ D+ R RGF F+ Y++ +E+ AI G
Sbjct: 5 KIYVGNLSWNTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAESAISG 64
Query: 139 MHGKFLDGRVIFVEIAKSR 157
++ + LDGR I V IA R
Sbjct: 65 LNDQDLDGRRIKVNIANPR 83
>gi|255565552|ref|XP_002523766.1| dc50, putative [Ricinus communis]
gi|223536978|gb|EEF38615.1| dc50, putative [Ricinus communis]
Length = 210
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GLS+ TS+ L+ AF+ FG L+E +V+DK + R RGF F+ + ++ AIE
Sbjct: 8 RCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIEE 67
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G LDGR I V+ A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>gi|67525063|ref|XP_660593.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
gi|40744384|gb|EAA63560.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
Length = 118
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LF+ GL++ T++D LR F +G + E +V D+ NR RGF F+R+A+E E+ A+
Sbjct: 2 AKLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMG 61
Query: 138 GMHGKFLDGRVIFVEIAKSRAELRQA 163
M+ + DGR+I V+ A R R
Sbjct: 62 AMNNQEFDGRIIRVDKASERPAARNG 87
>gi|449438165|ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
gi|449478936|ref|XP_004155458.1| PREDICTED: uncharacterized protein LOC101227324 [Cucumis sativus]
Length = 211
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GLS+ TS+ L+ AF+ FG LVE +V+DK + R RGF F+ + ++ AI+
Sbjct: 8 RCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKA 67
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G LDGR I V+ A+
Sbjct: 68 MNGMDLDGRSITVDKAQ 84
>gi|406988412|gb|EKE08420.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 123
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 55/89 (61%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q +L+V L+F SED +R F +G++ EV ++MD+ + R RGFAF+R AT +E+ +
Sbjct: 3 QQNQKLYVGNLNFDASEDQVRELFGSYGEVQEVKIIMDRFSGRSRGFAFVRMATADEAGK 62
Query: 135 AIEGMHGKFLDGRVIFVEIAKSRAELRQA 163
A + + G+ G+ + ++ A+S R A
Sbjct: 63 AKDALSGQPFQGKSLVIDWARSEQTSRPA 91
>gi|303315989|ref|XP_003067999.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240107675|gb|EER25854.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 117
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++++LR F FG + E +V D+ NR RGF F+R+A+E E+ A+
Sbjct: 2 SKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMN 61
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M+ + DGR I V+ A R
Sbjct: 62 EMNNQEFDGRTIRVDKAADR 81
>gi|119357086|ref|YP_911730.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
gi|119354435|gb|ABL65306.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
Length = 90
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L++ SED LR+AF FGQ+ N++ DK + R +GF F+ + + E+R AIE M
Sbjct: 3 IYIGNLAYTVSEDDLRDAFSQFGQVDSANIINDKFSGRSKGFGFIEMSNDSEAREAIESM 62
Query: 140 HGKFLDGRVIFVEIAK 155
+ + L GR I V AK
Sbjct: 63 NDQDLKGRTIKVNEAK 78
>gi|194337130|ref|YP_002018924.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309607|gb|ACF44307.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 90
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L++ +ED LR+AF FGQ+ +++ DK + R +GF F+ E E+R AIE M
Sbjct: 3 IYIGNLAYTVTEDDLRDAFSEFGQVESASIINDKFSGRSKGFGFVDMPNESEAREAIESM 62
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
+ K L+GR I V AK R E
Sbjct: 63 NEKDLNGRTIKVNEAKPREE 82
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ LS+ T+++SL++AF+ FG + E +V+DK + R RGFAF+ + +++ AIE
Sbjct: 8 RCFIGNLSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIED 67
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G LDGR I V+ A+
Sbjct: 68 MNGLDLDGRAITVDKAQ 84
>gi|297739973|emb|CBI30155.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R+FV GL + TSE L +AF +G+++E ++M++ RPRGF F+ +A
Sbjct: 4 REENRIFVGGLGWNTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRAMED 63
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AI MHG+ LDGRVI V A+
Sbjct: 64 AIREMHGRELDGRVISVNKAQ 84
>gi|427779523|gb|JAA55213.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 476
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P +S T P LFV+ +++ TSE LR F+ FG + ++ +V +KI +PRG
Sbjct: 85 IALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRREFEVFGPIKKIVIVHNKITGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKN 166
+AF+ Y E + A + GK +DGR + V++ + L A+K+
Sbjct: 145 YAFVEYEHERDMHSAYKHADGKKIDGRRVLVDVERGXV-LSAAYKH 189
>gi|218184292|gb|EEC66719.1| hypothetical protein OsI_33054 [Oryza sativa Indica Group]
Length = 117
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ G+S+ T + SL+ AF +G+++E +++D+ R RGF F+ Y + +E+
Sbjct: 27 CMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAA 86
Query: 134 RAIEGMHGK 142
AI GM GK
Sbjct: 87 AAITGMDGK 95
>gi|449666027|ref|XP_002162990.2| PREDICTED: probable RNA-binding protein 19-like [Hydra
magnipapillata]
Length = 914
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV LS+ +EDSL N F FG LVE+NL +DK +N+ GFAF+ + + + +A+
Sbjct: 409 RLFVRNLSYTCTEDSLTNLFSQFGPLVEINLPIDKNSNKTTGFAFVTFMMADHAIKAMSK 468
Query: 139 MHGKFLDGRVIFVEIAKSR 157
+ G +GR++ + KS+
Sbjct: 469 LDGSIFEGRILHILPGKSK 487
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q +++ V + F + L+ F FG + + L KI RGFAF+ + T+++++R
Sbjct: 789 QVSSKMVVRNIPFEATVKELQELFSTFGHIKSLRLP-KKITGTHRGFAFIDFTTKQDAKR 847
Query: 135 AIEGM-HGKFLDGRVIFVEIA 154
A + + L GR + +E A
Sbjct: 848 AFKALCQSTHLYGRRLVLEWA 868
>gi|410445335|gb|ADB77883.2| Rbmy [Bos taurus]
Length = 387
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L + GLS T+E+SL F +G +VEV L+ D+ N+ RGFAF+ + + +++ A +
Sbjct: 8 KLLIGGLSAETTEESLEAEFGKYGHIVEVLLIKDRNTNKSRGFAFITFESPADAKDAAKE 67
Query: 139 MHGKFLDGRVIFVEIA 154
M+GKFLDG+ I VE A
Sbjct: 68 MNGKFLDGKTIKVEQA 83
>gi|19881711|gb|AAM01112.1|AC098682_16 Putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 119
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ G+S+ T + SL+ AF +G+++E +++D+ R RGF F+ Y + +E+
Sbjct: 27 CMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAA 86
Query: 134 RAIEGMHGK 142
AI GM GK
Sbjct: 87 AAITGMDGK 95
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ R FV LS+ T + L AF FG++++ ++ D+ R RGF F+ ++ E+ + A
Sbjct: 7 AEYRCFVGSLSWNTDDRGLEAAFSSFGEILDAKIINDRETGRSRGFGFVSFSNEQAMQDA 66
Query: 136 IEGMHGKFLDGRVIFVEIAKS 156
IEGM+GK LDGR I V A+S
Sbjct: 67 IEGMNGKELDGRSIVVNEAQS 87
>gi|302754726|ref|XP_002960787.1| hypothetical protein SELMODRAFT_163608 [Selaginella moellendorffii]
gi|300171726|gb|EFJ38326.1| hypothetical protein SELMODRAFT_163608 [Selaginella moellendorffii]
Length = 359
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 54 GRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDK 113
GR LA + S + S Q + +L++ GLS+ TS ++L N F +G++ E + DK
Sbjct: 138 GRITVCNLASVGSSAGAGSADQAQRKLYIGGLSYETSNETLLNIFSQYGEIEEGAVAYDK 197
Query: 114 IANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKNNPRQN 171
N+ RGFAF+ Y + E +R+AI+ + K ++GR + V++A + + +A + QN
Sbjct: 198 NTNKSRGFAFITYKSVEAARKAIDDPN-KTIEGRHVIVKLA-AEGQKEKAVSQSSAQN 253
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL++ T+ +LR+AFQ +G++ E ++ DK + RGF F+ + + ++RA++
Sbjct: 72 KLFVRGLAWETTSQALRDAFQHYGEIEEGAVITDKATGKSRGFGFITFKHMDSAQRALK- 130
Query: 139 MHGKFLDGRVIFVEIA 154
K +DGR+ +A
Sbjct: 131 EPSKTIDGRITVCNLA 146
>gi|2226370|gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T++ +L +AF +G++++ ++ D+ R RGF F+ + E+ R
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKS 156
AIEGM+G+ LDGR I V A+S
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQS 84
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G++VE ++ D+ R RGF F+ ++ E+
Sbjct: 1 MASADVEYRCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
AIEGM+G+ LDGR I V A+
Sbjct: 61 SMNDAIEGMNGQNLDGRNITVNEAQ 85
>gi|345313668|ref|XP_001512332.2| PREDICTED: cold-inducible RNA-binding protein-like [Ornithorhynchus
anatinus]
Length = 270
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
M+GK +DGR I V+ A +E
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSE 87
>gi|449435011|ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 1
[Cucumis sativus]
gi|449435013|ref|XP_004135290.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 2
[Cucumis sativus]
Length = 89
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+ LF+S LS T+ + L+N F FG + E L+ D RP+GF F+ + + E+++A++
Sbjct: 7 SELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKALK 66
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M G+ +DGR+IFVE AK+
Sbjct: 67 AMDGRIVDGRLIFVEFAKT 85
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++L+V LSF TSE LR AF G L +V L D+ RPRGFAF+ + T EES+ A E
Sbjct: 3 SKLYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFAFVTFDTAEESQLATE 62
Query: 138 GMHGKFLDGRVIFVEIAK 155
++G L GR I V A+
Sbjct: 63 KLNGTDLGGRAITVNEAR 80
>gi|194336480|ref|YP_002018274.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308957|gb|ACF43657.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 95
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L++ SED LR+AF FG++ +++ DK + R +GF F+ + E+R AIE M
Sbjct: 3 IYIGNLAYTVSEDDLRDAFSEFGEVANASIINDKFSGRSKGFGFVEMPKDSEAREAIESM 62
Query: 140 HGKFLDGRVIFVEIAK 155
+GK L+GR + V AK
Sbjct: 63 NGKDLNGRTVTVNEAK 78
>gi|221065733|ref|ZP_03541838.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|264678761|ref|YP_003278668.1| RNA-binding region RNP-1 [Comamonas testosteroni CNB-2]
gi|220710756|gb|EED66124.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|262209274|gb|ACY33372.1| RNA-binding region RNP-1 [Comamonas testosteroni CNB-2]
Length = 113
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+++V L + ++ SLR+ F FG + ++MD+ R +GFAF+ + +E + AI
Sbjct: 3 TKIYVGNLPYSVTDSSLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAAIS 62
Query: 138 GMHGKFLDGRVIFVEIAKSRAELR 161
G+HG +DGR I V +AK R E R
Sbjct: 63 GLHGMSVDGRSIVVNLAKPREEGR 86
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 142
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ T++DSLR AF +G +++ ++ D+ R RGF F+ Y+ EE+ AI
Sbjct: 4 KVYVGNLSWNTTDDSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFVTYSATEEADAAIAS 63
Query: 139 MHGKFLDGRVIFVEIAKSR 157
+H + LDGR I V IA +R
Sbjct: 64 LHDQELDGRRIKVNIANAR 82
>gi|225441175|ref|XP_002265930.1| PREDICTED: uncharacterized protein LOC100257264 [Vitis vinifera]
Length = 332
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ R+FV GL + TSE L +AF +G+++E ++M++ RPRGF F+ +A AI
Sbjct: 6 ENRIFVGGLGWNTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRAMEDAI 65
Query: 137 EGMHGKFLDGRVIFVEIAK 155
MHG+ LDGRVI V A+
Sbjct: 66 REMHGRELDGRVISVNKAQ 84
>gi|164427760|ref|XP_965121.2| hypothetical protein NCU02736 [Neurospora crassa OR74A]
gi|157071873|gb|EAA35885.2| predicted protein [Neurospora crassa OR74A]
Length = 200
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LFV GLS+ T ++ LR F+ FG + E +V D+ R RGF F+RY + ++ AI
Sbjct: 2 AKLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAIA 61
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
M G+ DGR + V+ A RA
Sbjct: 62 NMDGQEFDGRRVRVDKASDRA 82
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana) tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 166
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+C + +LFV GL+F T+E+SL F +GQ+ EV +V D+ + R RGF F+ + E++
Sbjct: 2 SC-DEGKLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDA 60
Query: 133 RRAIEGMHGKFLDGRVIFVEIA 154
+ A+ M+GK +DGR I V+ A
Sbjct: 61 KDAMMAMNGKSVDGRQIRVDQA 82
>gi|255930353|ref|XP_002556736.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581349|emb|CAP79122.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 140
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GLS+ T ++SLR F+ FG + + +V D+ R RGF F+R++T++E+ A+
Sbjct: 2 SKLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDDEATAAMN 61
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
M+ + DGR I V+ A RA
Sbjct: 62 AMNNQEFDGRQIRVDKATERA 82
>gi|119492333|ref|XP_001263582.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
gi|119411742|gb|EAW21685.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
Length = 118
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 54/80 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++D+LR F+ +G + E +V D+ NR RGF F+R++++ E+ A++
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMD 61
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M+ + DGR I V+ A R
Sbjct: 62 AMNNQEFDGRTIRVDKASER 81
>gi|224131664|ref|XP_002321147.1| predicted protein [Populus trichocarpa]
gi|222861920|gb|EEE99462.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV+GLS+ E SL++AF FG + EVN++ D+ + R RGF F+ + E+E+ A +
Sbjct: 19 KLFVAGLSWSVDEKSLKDAFSSFGDVTEVNILYDRNSGRSRGFGFVSFCKEDEAVSAKDA 78
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M GK L GR + + A R
Sbjct: 79 MDGKALLGRPLRISYALER 97
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E+SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEESLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAE 159
A+ M+GK +DGR I V+ A +E
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSE 87
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 53/82 (64%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T++ +L +AF +G++V+ ++ D+ R RGF F+ + E+ R
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAK 155
AIEGM+G+ LDGR I V A+
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQ 83
>gi|423302507|ref|ZP_17280529.1| hypothetical protein HMPREF1057_03670 [Bacteroides finegoldii
CL09T03C10]
gi|408470383|gb|EKJ88917.1| hypothetical protein HMPREF1057_03670 [Bacteroides finegoldii
CL09T03C10]
Length = 99
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 54/80 (67%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++++GLS+RT++ L N F FG++ ++MD+ + RGFAF+ ++EE ++AI+ +
Sbjct: 3 IYIAGLSYRTNDADLTNLFAEFGEVSSAKVIMDRETGKSRGFAFVEMTSDEEGQKAIDEL 62
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
+G D +VI V +A+ RAE
Sbjct: 63 NGVEYDQKVISVSVARPRAE 82
>gi|357145731|ref|XP_003573746.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 475
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P +++D F L QG + A L P S + +T P LFV+ L++ T
Sbjct: 92 PVPTCETRAEKKDRIQKFKLEQGAAKVAEDLLKYDPQSDPN-TTGDPYKTLFVARLNYET 150
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVI 149
SE ++ F+ +G + V LV DK N+PRG+AF+ Y + + A + G+ +D + +
Sbjct: 151 SESRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNKRV 210
Query: 150 FVEIAKSR 157
V++ + R
Sbjct: 211 LVDVERGR 218
>gi|71000080|ref|XP_754757.1| glycine-rich RNA-binding protein [Aspergillus fumigatus Af293]
gi|66852394|gb|EAL92719.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
Af293]
gi|159127765|gb|EDP52880.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
A1163]
Length = 118
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 54/80 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++D+LR F+ +G + E +V D+ NR RGF F+R++++ E+ A++
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMD 61
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M+ + DGR I V+ A R
Sbjct: 62 AMNNQEFDGRTIRVDKASER 81
>gi|351723119|ref|NP_001235732.1| uncharacterized protein LOC100526902 [Glycine max]
gi|255631115|gb|ACU15923.1| unknown [Glycine max]
Length = 176
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GL++ TS+ L++ F+ FG+L+E +V+DK + R RGF F+ + ++ AI+
Sbjct: 8 RCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDA 67
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G LDGR I V+ A+
Sbjct: 68 MNGMDLDGRTITVDRAQ 84
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E SL + F +GQ+ EV ++ D+ R RGF F+ + +E++ A
Sbjct: 3 DEGKLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ M+GK LDGR I V+ A
Sbjct: 63 MLAMNGKSLDGRQIRVDQA 81
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A +E R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSENR 89
>gi|82248148|sp|Q9PTX2.1|CIRBP_RANCA RecName: Full=Cold-inducible RNA-binding protein; Short=BFCIRP;
AltName: Full=Glycine-rich RNA-binding protein CIRP
gi|6682989|dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T E L F +GQ+ EV +V D+ R RGF F+ + E+++ A
Sbjct: 4 DEGKLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDA 63
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ GM+GK +DGR I V+ A
Sbjct: 64 MAGMNGKTVDGRQIRVDQA 82
>gi|57899926|dbj|BAD87838.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 203
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 52/78 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLS+ T+E +L++AF G +++V ++ + + +G+ F+++A+E+E+ A+
Sbjct: 125 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 184
Query: 139 MHGKFLDGRVIFVEIAKS 156
M G+ +DGR I V A S
Sbjct: 185 MGGEVIDGRNIRVHYANS 202
>gi|258564224|ref|XP_002582857.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908364|gb|EEP82765.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 146
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++++LR F +G + E +V D+ NR RGF F+R+A+E E+ A+
Sbjct: 2 SKLFIGGLAWHTTDETLREGFSKYGTIEEAIVVKDRDTNRSRGFGFVRFASEAEADAAMN 61
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M + DGR+I V+ A R
Sbjct: 62 AMSNQEFDGRMIRVDKAADR 81
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T++ +L AF +G+++E ++ D+ R RGF F+ + E+ R
Sbjct: 2 AEVEYRCFVGGLAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMR 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKS 156
AIEGM+G+ LDGR I V A+S
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQS 84
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 136 IEGMHGKFLDGRVIFVEIAKSRAELR 161
+ M+GK +DGR I V+ A +E R
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKSSENR 89
>gi|255585455|ref|XP_002533421.1| RNA binding protein, putative [Ricinus communis]
gi|223526734|gb|EEF28964.1| RNA binding protein, putative [Ricinus communis]
Length = 152
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 22/143 (15%)
Query: 31 APATPFTI----KRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLS 86
A ATP TI + S +LR + FPLA +R+ V L
Sbjct: 8 ALATPITISIPSRPNGKSSTLNLRASFSSTSNFPLA---------------SRIIVKNLG 52
Query: 87 FRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDG 146
+ E SL+ F FG++ EV LV D R + F F++Y ++++ A+E M K DG
Sbjct: 53 YSVGESSLQKEFSNFGEIAEVKLVKDDERKRSKAFVFIQYTCQDDAILAMENMDRKIFDG 112
Query: 147 RVIFVEIAKSRAELRQAFKNNPR 169
R+I+V++AK ++ F+ P+
Sbjct: 113 RLIYVDLAKPG---KETFRGYPK 132
>gi|225706362|gb|ACO09027.1| Cold-inducible RNA-binding protein [Osmerus mordax]
Length = 172
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E SL + F +GQ+ EV ++ D+ R RGF F+ + +E++ A
Sbjct: 3 DEGKLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFDNPDEAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ M+GK LDGR I V+ A
Sbjct: 63 MLAMNGKSLDGRQIRVDQA 81
>gi|396471623|ref|XP_003838913.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
gi|312215482|emb|CBX95434.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
Length = 164
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T + +LR F+ FGQ+ E +V D+ R RGF F+RYA + E+ A++
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYANDAEADAAMQ 61
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
++ + DGR I V+ A RA
Sbjct: 62 ALNNEEFDGRRIRVDKASDRA 82
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A +E R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSENR 89
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A+
Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
Query: 137 EGMHGKFLDGRVIFVEIAKSRAELR 161
M+GK +DGR I V+ A ++ R
Sbjct: 65 MAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|302756609|ref|XP_002961728.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
gi|300170387|gb|EFJ36988.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
Length = 130
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ + +LR AF +G++ E ++MD+ R RGF F+ + + E++ A++
Sbjct: 10 SKLFIGGLAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAVQ 69
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
GM G L GR I V+ A R
Sbjct: 70 GMDGHELGGRSIRVDYASDR 89
>gi|111162637|gb|ABH07505.1| glycine-rich RNA-binding protein [Nicotiana attenuata]
Length = 152
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T++ +L +AF FG++++ ++ D+ R RGF F+ + E+ R
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMR 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKS 156
AIEGM G+ LDGR I V A+S
Sbjct: 62 DAIEGMKGQDLDGRNITVNEAQS 84
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C +RLFV GLS+ T + SL++AF FG++ + ++ D+ R RGF F+ + E +
Sbjct: 31 CMSSSRLFVGGLSWGTDDQSLKDAFSSFGEVTDAKVITDRETGRSRGFGFVNFVDNEAAG 90
Query: 134 RAIEGMHGKFLDGRVIFVEIAK 155
A+ M G L+GR I V A+
Sbjct: 91 SALSSMDGVELNGRSIRVSFAQ 112
>gi|2331131|gb|AAB66884.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 162
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
K R FV GL++ T + SL AF +G++++ ++ D+ R GF F+ +++E+ R AI
Sbjct: 7 KYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSLGFGFITFSSEQSMRDAI 66
Query: 137 EGMHGKFLDGRVIFVEIAK 155
EGM+GK LDGR I V A+
Sbjct: 67 EGMNGKELDGRNITVNEAQ 85
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A +E R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSENR 89
>gi|388492070|gb|AFK34101.1| unknown [Lotus japonicus]
Length = 211
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GL++ TS+ L++AF+ FG+L E +V+DK + R RGF F+ + ++ AI+
Sbjct: 8 RCFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDA 67
Query: 139 MHGKFLDGRVIFVE 152
M+G LDGR I V+
Sbjct: 68 MNGMDLDGRTITVD 81
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A +E R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSENR 89
>gi|224105391|ref|XP_002313795.1| predicted protein [Populus trichocarpa]
gi|222850203|gb|EEE87750.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 54/84 (64%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ + + R FV GL++ T++ L+ AF +G++++ ++ D+ R RGF F+ + E+
Sbjct: 1 SAEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAM 60
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKS 156
R AI+GM+G+ LDGR I V A+S
Sbjct: 61 RDAIDGMNGQDLDGRNITVNEAQS 84
>gi|226505736|ref|NP_001150149.1| LOC100283778 [Zea mays]
gi|195605606|gb|ACG24633.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637130|gb|ACG38033.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|238009788|gb|ACR35929.1| unknown [Zea mays]
gi|413951537|gb|AFW84186.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LF+ GL + + LR AF FG++ E ++ D+ R RGF F+ Y+ + ++ AI
Sbjct: 37 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 96
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M GK +DGR + V +A R
Sbjct: 97 AMDGKEIDGRQVRVNMANER 116
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 68 PHSLSTCQ-----PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
P +LS Q +++FV GLS+ T + L AF +G++VE ++MD+ R RGF
Sbjct: 25 PSNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFG 84
Query: 123 FLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
F+ + E++ AI+ + G+ LDGR I A RA
Sbjct: 85 FVTFGASEDASSAIQALDGQDLDGRRIRCSYATDRA 120
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 68 PHSLSTCQ-----PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
P +LS Q +++FV GLS+ T + L AF +G++VE ++MD+ R RGF
Sbjct: 25 PSNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFG 84
Query: 123 FLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
F+ + E++ AI+ + G+ LDGR I A RA
Sbjct: 85 FVTFGASEDASSAIQALDGQDLDGRRIRCSYATDRA 120
>gi|297819752|ref|XP_002877759.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
gi|297323597|gb|EFH54018.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRG-RGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFR 88
P P ++R+ + LR +G A L P+ +T P LFVS L++
Sbjct: 91 PKPEVELPSQKRE--RIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYE 148
Query: 89 TSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRV 148
+SE ++ F+ +G + V+LV D++ N+P+G+AF+ Y + + A + G+ +DGR
Sbjct: 149 SSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRR 208
Query: 149 IFVEIAKSRA 158
+ V++ + R
Sbjct: 209 VLVDVERGRT 218
>gi|225680987|gb|EEH19271.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226292701|gb|EEH48121.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 148
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GL++ T++ +LR F+ +G + E +V D+ NR RGF F+R++ + E+ A+
Sbjct: 2 SKLFVGGLAWHTTDQTLRQGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFSRDVEADAAMN 61
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
M + DGRVI V+ A RA
Sbjct: 62 AMSNQEFDGRVIRVDKASDRA 82
>gi|302762759|ref|XP_002964801.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
gi|300167034|gb|EFJ33639.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
Length = 127
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 66 PSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLR 125
P + C +L+V+GL++ + SLR AF+ FG +++ ++ + R +GF F+
Sbjct: 12 PKARYMRAC----KLYVNGLAWGVDDLSLRGAFEEFGDVIDTKVMTNPDTGRSKGFGFVT 67
Query: 126 YATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQ 162
+ E+E++ A+E M GK GR I V+ AK++ E++Q
Sbjct: 68 FKREDEAKEALESMDGKDFAGRSIRVDYAKTQKEMQQ 104
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A +E R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSENR 89
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 54/84 (64%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ + + R FV GL++ T++ L+ AF +G++++ ++ D+ R RGF F+ + E+
Sbjct: 2 SAEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAM 61
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKS 156
R AI+GM+G+ LDGR I V A+S
Sbjct: 62 RDAIDGMNGQDLDGRNITVNEAQS 85
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 54/84 (64%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ + + R FV GL++ T++ L+ AF +G++++ ++ D+ R RGF F+ + E+
Sbjct: 2 SAEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAM 61
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKS 156
R AI+GM+G+ LDGR I V A+S
Sbjct: 62 RDAIDGMNGQDLDGRNITVNEAQS 85
>gi|308272084|emb|CBX28692.1| Glycine-rich RNA-binding protein 8 [uncultured Desulfobacterium
sp.]
Length = 127
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ +ED LR AF+ G++ V+++ DK + R +GF F+ +++ E++ AIEG
Sbjct: 2 KIYVGNLSYEVNEDDLRQAFEQLGKVDSVSIINDKYSGRSKGFGFVEMSSDAEAQAAIEG 61
Query: 139 MHGKFLDGRVIFVEIAK 155
++GK L GR I V A+
Sbjct: 62 LNGKELKGRAINVNEAR 78
>gi|357127016|ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 109
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 59 FPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
PL L + S+C ++LFV GLS+ T+E +L++AF G + EV ++ + R
Sbjct: 14 IPLRNLLNRSANFSSC---SKLFVGGLSYDTNEIALKDAFSQHGTVTEVKVICHPVTGRS 70
Query: 119 RGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKS 156
+G+ F+++++E E+ A+E M + LDGR I V A S
Sbjct: 71 KGYGFVKFSSESEAAAALEKMSNELLDGRNIRVHYANS 108
>gi|22328599|ref|NP_193122.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|48310472|gb|AAT41827.1| At4g13860 [Arabidopsis thaliana]
gi|332657937|gb|AEE83337.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 87
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
TR++V LS T++D LR AF G+G +V+ ++ D+ +R RGF F+ Y++ E+ A+
Sbjct: 3 TRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVS 62
Query: 138 GMHGKFLDGRVIFVEI 153
GM GK L+GR + V++
Sbjct: 63 GMDGKELNGRRVSVKL 78
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A+
Sbjct: 19 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 78
Query: 139 MHGKFLDGRVIFVEIAKSRAELR 161
M+GK +DGR I V+ A ++ R
Sbjct: 79 MNGKSVDGRQIRVDQAGKSSDNR 101
>gi|443895166|dbj|GAC72512.1| hypothetical protein PANT_7d00134 [Pseudozyma antarctica T-34]
Length = 301
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+++V LS+ T++DSL +AF FGQL + ++ D+ R RGF F+ +AT+ E+ AI
Sbjct: 3 AKVYVGNLSWNTTDDSLAHAFSAFGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIA 62
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
++ + LDGR I V +A SR
Sbjct: 63 ALNEQELDGRRIRVNMANSR 82
>gi|196234692|ref|ZP_03133505.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196221240|gb|EDY15797.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 126
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LSF T+E L++AF G + EV L+ DK R RGFAF+ AT +E+++AI
Sbjct: 4 KLYVGNLSFDTTEVDLQDAFAEAGTVQEVALMQDKFTGRSRGFAFVTMATPDEAQKAISI 63
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
HGK L GR + V A+ R E
Sbjct: 64 FHGKTLQGRPLTVNEARPREE 84
>gi|426397153|ref|XP_004064790.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 isoform 1
[Gorilla gorilla gorilla]
Length = 412
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL+ +T E +L+ F +G +++V L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFVGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPADAKAAARD 68
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQAFKNN 167
M+GK+LDG+ I V A ++ AFK++
Sbjct: 69 MNGKYLDGKAIMVAQA-----IKPAFKSS 92
>gi|168034546|ref|XP_001769773.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678882|gb|EDQ65335.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 62 ACLPPSPHSLSTCQPKTRLFV-SGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
A P+ + ++LF+ +GL++ T E++LR+AF FG + EV +++D+ R RG
Sbjct: 29 AVAVPAMLVVQRMMSSSKLFIGAGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRG 88
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
F F+ + + EE+ A++ M G+ L GR I V+ A +A
Sbjct: 89 FGFVNFTSPEEAEVALQEMDGRELAGRQIRVDYATDKA 126
>gi|357462751|ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490705|gb|AES71908.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 146
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQG + P++ + +S+ ++LF+ GLS+ + SLR+AF +G +VE
Sbjct: 11 LRQGATQSTQAPVSSMLNYLRHMSS----SKLFIGGLSYNVDDQSLRDAFTTYGDVVEAR 66
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
++ D+ R RGF F+ + +EE + A+ M G+ L+GR I V A R
Sbjct: 67 VITDRETGRSRGFGFVNFTSEESATSALS-MDGQDLNGRNIRVSYANDR 114
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAE 159
A+ M+GK +DGR I V+ A +E
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSE 87
>gi|255584774|ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
gi|223527096|gb|EEF29277.1| cold-inducible RNA binding protein, putative [Ricinus communis]
Length = 94
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 53/79 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV LS T+ L F FG + E LV+D +P+GF F+ + +E ++++A++
Sbjct: 7 SQLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQAQKALK 66
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M+G+ +DGR++FVE+AKS
Sbjct: 67 AMNGRIVDGRLLFVEVAKS 85
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAE 159
A+ M+GK +DGR I V+ A +E
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSE 87
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
++ G G GA A L ++LF+ GL++ T E++LR+AF FG + +V
Sbjct: 21 MKSGLGAGAAAVPAMLMAQRF-----MSSSKLFIGGLAWATDENTLRDAFGSFGTVTDVK 75
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAE 159
+++D+ R RGF F+ + + +E+ A++ M G+ L GR I V+ A +++
Sbjct: 76 IILDRDTGRSRGFGFVNFTSPQEAEVALQEMDGRELAGRQIRVDYATDKSD 126
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 63 CLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFA 122
P + ++++ + K LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF
Sbjct: 20 VTPEAQAAMASDEGK--LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFG 77
Query: 123 FLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELR 161
F+ + ++++ A+ M+GK +DGR I V+ A ++ R
Sbjct: 78 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNR 116
>gi|15229825|ref|NP_190636.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|13633916|sp|Q42404.1|RU17_ARATH RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|1255711|gb|AAD12773.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|1354469|gb|AAD12775.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|6561970|emb|CAB62436.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|14532500|gb|AAK63978.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|20334806|gb|AAM16264.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|332645171|gb|AEE78692.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 427
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRG-RGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFR 88
P P ++R+ + LR +G A L P+ +T P LFVS L++
Sbjct: 91 PKPEVELPSQKRE--RIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYE 148
Query: 89 TSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRV 148
+SE ++ F+ +G + V+LV D++ N+P+G+AF+ Y + + A + G+ +DGR
Sbjct: 149 SSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRR 208
Query: 149 IFVEIAKSRA 158
+ V++ + R
Sbjct: 209 VLVDVERGRT 218
>gi|193662169|ref|XP_001952270.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 414
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 67 SPHSLS--TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
PHS++ T P LFV+ +++ TSE LR F+ +G + ++ + +KI +PRG+AF+
Sbjct: 89 EPHSVANATTDPFKTLFVARINYDTSESKLRREFELYGPIKKIVVTHNKIDGKPRGYAFI 148
Query: 125 RYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
Y E + A + GK +DGR + V++ ++R
Sbjct: 149 EYEYERDMHSAYKHADGKKIDGRRVLVDVERART 182
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F+ +G++V++ + D+ RGFAF+RY E+E+++A++ +
Sbjct: 18 LLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRVVDGREIMVQFAK 93
>gi|426397155|ref|XP_004064791.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 isoform 2
[Gorilla gorilla gorilla]
Length = 413
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL+ +T E +L+ F +G +++V L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFVGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPADAKAAARD 68
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQAFKNN 167
M+GK+LDG+ I V A ++ AFK++
Sbjct: 69 MNGKYLDGKAIMVAQA-----IKPAFKSS 92
>gi|116624848|ref|YP_827004.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116228010|gb|ABJ86719.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 97
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV LSF +ED++R F+ G++ VN+ D+ + +PRGF F+ A + E+ +AI +
Sbjct: 4 IFVGNLSFGATEDTVRALFETHGKVDRVNICTDRDSGQPRGFGFVEMANDSEAEKAISAV 63
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
+GK LDGR + V A+ +AE
Sbjct: 64 NGKELDGRALNVNEARPKAE 83
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAE 159
A+ M+GK +DGR I V+ A +E
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSE 87
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T++ SL+ AF +G++++ ++ D+ R RGF F+ + E+ R
Sbjct: 3 AEVEYRCFVGGLAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKAMR 62
Query: 134 RAIEGMHGKFLDGRVIFVEIAK 155
AI+GM+G+ LDGR I V A+
Sbjct: 63 DAIDGMNGQDLDGRNITVNEAQ 84
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GLS+ T + SL AF FG++ + ++ D+ R RGF F+ +A E+ R
Sbjct: 2 AEVEYRCFVGGLSWGTDDRSLAEAFNKFGEVTDSKIINDRETGRSRGFGFVTFANEQSMR 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAK 155
AI+ M+GK LDGR I V A+
Sbjct: 62 DAIDEMNGKELDGRSITVNEAQ 83
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|225447115|ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera]
gi|297739201|emb|CBI28852.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV+GLS+ E SL++AF FG + EV ++ DK + R RGF F+ ++ E ++R A +
Sbjct: 38 TKLFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKEVDARSAKD 97
Query: 138 GMHGKFLDGRVIFVEIA 154
M GK GR + V A
Sbjct: 98 AMDGKAFLGRPLRVSYA 114
>gi|1395193|dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ LS+ TS+ L++AF+ FG LV+ +V+DK + R RGF F+ + + AIE
Sbjct: 7 RCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDEKRAMEDAIEA 66
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G LDGR I V+ A+
Sbjct: 67 MNGVDLDGRDITVDKAQ 83
>gi|168037600|ref|XP_001771291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677380|gb|EDQ63851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T++D L AF+ FG +++ ++ D+ R RGF F+ +A E AI+
Sbjct: 3 RCFVGGLAWATTDDRLEQAFRPFGDVIQSKVISDRETGRSRGFGFITFADENAMNEAIKE 62
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+GK LDGR I V A+SR
Sbjct: 63 MNGKELDGRNITVNQAQSR 81
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F+ +G++V++ + D+ RGFAF+RY E+E+++A++ +
Sbjct: 18 LLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRVVDGREIMVQFAK 93
>gi|195642478|gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LF+ GL + + LR AF FG++ E ++ D+ R RGF F+ Y+ + ++ AI
Sbjct: 37 TKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAIS 96
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M GK +DGR + V +A R
Sbjct: 97 AMDGKEIDGRQVRVNMANER 116
>gi|359807285|ref|NP_001240860.1| uncharacterized protein LOC100815224 [Glycine max]
gi|255645181|gb|ACU23088.1| unknown [Glycine max]
Length = 208
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GL++ TS+ L++ F+ FG+L+E +V+DK + R RGF F+ + ++ AI+
Sbjct: 8 RCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDA 67
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G LDGR I V+ A+
Sbjct: 68 MNGIDLDGRTITVDRAQ 84
>gi|218189840|gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indica Group]
Length = 116
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 52/78 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLS+ T+E +L++AF G +++V ++ + + +G+ F+++A+E+E+ A+
Sbjct: 38 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 97
Query: 139 MHGKFLDGRVIFVEIAKS 156
M G+ +DGR I V A S
Sbjct: 98 MGGEVIDGRNIRVHYANS 115
>gi|212722336|ref|NP_001132163.1| uncharacterized protein LOC100193584 [Zea mays]
gi|194693616|gb|ACF80892.1| unknown [Zea mays]
Length = 234
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L GL++ TS +SL NAF +G++++ ++ D+ R RGF F+ +++E AIE
Sbjct: 83 TPLPSGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIE 142
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M+GK LDGR I V A+S
Sbjct: 143 NMNGKELDGRNITVNQAQS 161
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
++LFV GLS+ T + +L++ F +G ++E +++D+ + +G+ F+ Y + EE+ A+
Sbjct: 30 SSKLFVGGLSYATDDTTLKDVFSHYGDVLEARIIIDRDTGKSKGYGFITYTSSEEAAAAV 89
Query: 137 EGMHGKFLDGRVIFVEIA 154
M GK L GR++ V A
Sbjct: 90 TAMDGKDLQGRIVRVSTA 107
>gi|255691172|ref|ZP_05414847.1| RNA-binding protein [Bacteroides finegoldii DSM 17565]
gi|260623075|gb|EEX45946.1| hypothetical protein BACFIN_06178 [Bacteroides finegoldii DSM
17565]
Length = 99
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 53/80 (66%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++++GLS+RT++ L N F FG++ ++MD+ RGFAF+ ++EE ++AI+ +
Sbjct: 3 IYIAGLSYRTNDADLTNLFAEFGEVSSAKVIMDRETGNSRGFAFVEMTSDEEGQKAIDEL 62
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
+G D +VI V +A+ RAE
Sbjct: 63 NGVEYDQKVISVSVARPRAE 82
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 23 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 82
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 83 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 110
>gi|357146958|ref|XP_003574171.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 478
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P +++D L QG + L P T P LFV+ L++ T
Sbjct: 91 PVPTCETRAEKKDRIRQLKLEQGAAK-VAEELQKYDPQNDPNVTGDPYKTLFVARLNYET 149
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVI 149
SE ++ F+ +G + V LV DK+ N+PRG+AF+ Y + + A + G+ +D + +
Sbjct: 150 SEQKVKRDFEAYGPIKRVRLVTDKVTNKPRGYAFVEYVHTRDMKSAYKQADGRKVDNKRV 209
Query: 150 FVEIAKSR 157
V++ + R
Sbjct: 210 LVDVERGR 217
>gi|159163576|pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp
Length = 102
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 9 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 68
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 69 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 96
>gi|118474079|ref|YP_892397.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|424821065|ref|ZP_18246103.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
gi|118413305|gb|ABK81725.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|342327844|gb|EGU24328.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
Length = 82
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS+R +E LR F FG++ +V DK NR +GF F+ +++E++++AIEG
Sbjct: 4 IYVGNLSYRMTESELREVFSSFGEVTRAKIVKDKETNRSKGFGFVEMSSDEQAKKAIEGT 63
Query: 140 HGKFLDGRVIFVEIAKSR 157
+GK + GR + V A+ R
Sbjct: 64 NGKEVGGRALRVNEARPR 81
>gi|194385818|dbj|BAG65284.1| unnamed protein product [Homo sapiens]
Length = 263
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK +DGR I V+ A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 139 MHGKFLDGRVIFVEIAKSRAELR 161
M+GK +DGR I V+ A ++ R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>gi|449273022|gb|EMC82651.1| Cold-inducible RNA-binding protein [Columba livia]
Length = 153
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAE 159
A+ M+GK +DGR I V+ A +E
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSE 87
>gi|389632187|ref|XP_003713746.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
gi|351646079|gb|EHA53939.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
Length = 236
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ +G + E +V D+ R RGF F+RY E+++++AI
Sbjct: 57 SKLFIGGLAWHTEEGTLRQKFEEYGVVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQKAIT 116
Query: 138 GMHGKFLDGRVIFVEIA 154
M+ DGR I V+ A
Sbjct: 117 AMNNVEFDGRTIRVDKA 133
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|30689357|ref|NP_850395.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis
thaliana]
gi|18252907|gb|AAL62380.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
gi|21389635|gb|AAM48016.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
gi|330255163|gb|AEC10257.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis
thaliana]
Length = 333
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%)
Query: 58 CFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANR 117
C+ PS S + P LFV LS T+ED+LR +G++ + LV +
Sbjct: 44 CYNAGLYDPSGDSKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGA 103
Query: 118 PRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVE 152
RG+ F+ Y TE+E RA E H +DGR I V+
Sbjct: 104 SRGYGFVEYETEKEMLRAYEDAHHSLIDGREIIVD 138
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 53/79 (67%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GLS+ T+E SL AF +G + +V+++ D+ +R RGF F+ + E+++ A
Sbjct: 3 DEGKLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ M+GK +DGR+I V+ A
Sbjct: 63 MAAMNGKQVDGRMIRVDEA 81
>gi|297598418|ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group]
gi|215768629|dbj|BAH00858.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619969|gb|EEE56101.1| hypothetical protein OsJ_04953 [Oryza sativa Japonica Group]
gi|255674125|dbj|BAF07470.2| Os01g0974600 [Oryza sativa Japonica Group]
Length = 116
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 52/78 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLS+ T+E +L++AF G +++V ++ + + +G+ F+++A+E+E+ A+
Sbjct: 38 KLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHK 97
Query: 139 MHGKFLDGRVIFVEIAKS 156
M G+ +DGR I V A S
Sbjct: 98 MGGEVIDGRNIRVHYANS 115
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 58 CFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANR 117
C L + S+S+ ++LFV GLS+ T E SL+ AF G+++E ++MD+ R
Sbjct: 24 CASRTSLYQAIRSMSS----SKLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGR 79
Query: 118 PRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
RGF F+ + + EE+ A+ + G+ L GR I V A +
Sbjct: 80 SRGFGFVSFTSTEEAASALTALDGQDLHGRQIRVNYATEK 119
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P T ++R L +G + A L P + P LFV+ LS+ T
Sbjct: 94 PVPETETPAQKRARIHKLRLEKGAAK-AAEELEKYDPHNDPNVSGDPYKTLFVAKLSYET 152
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVI 149
+E ++ F+ +G + V LV DK N+PRG+AF+ Y + + A + G+ +DGR +
Sbjct: 153 TESRIKREFESYGPIKRVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRV 212
Query: 150 FVEIAKSR 157
V++ + R
Sbjct: 213 LVDVERGR 220
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F +G++V++ + D+ RGFAF+RY E+E+++A+E +
Sbjct: 19 LLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVERL 78
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 79 DGRLVDGREIMVQFAK 94
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 139 MHGKFLDGRVIFVEIAKSRAELR 161
M+GK +DGR I V+ A ++ R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>gi|68036648|gb|AAY84878.1| U1 snRNP-interacting 70 kDa protein [Triticum aestivum]
Length = 481
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P +++D L +G + L P T P LFV+ L + T
Sbjct: 91 PVPTCETRAEKKDRIRQLKLEEGAAK-VAEELQKYDPQNDPNVTGDPYKTLFVARLGYET 149
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVI 149
SE ++ F+ +G + V LV DK+ N+PRG+AF+ YA + + A + G+ +D + +
Sbjct: 150 SEQKVKRDFEAYGPIKRVRLVTDKVTNKPRGYAFVEYAHTRDMKSAYKQADGRKVDNKRV 209
Query: 150 FVEIAKSR 157
V++ + R
Sbjct: 210 LVDVERGR 217
>gi|407033602|gb|EKE36900.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 136
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 57/82 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
TRL++ L++ +++SL+ AF+ FG + + +V D+ + R +GF F+ + +E++++AIE
Sbjct: 2 TRLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIE 61
Query: 138 GMHGKFLDGRVIFVEIAKSRAE 159
M+ + L+GR I V++++ R E
Sbjct: 62 EMNEQELEGRRIKVDVSRPREE 83
>gi|367020484|ref|XP_003659527.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila ATCC
42464]
gi|347006794|gb|AEO54282.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila ATCC
42464]
Length = 153
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG++ E +V D+ R RGF F+RY E+++++AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGEVEEAVVVKDRDTGRSRGFGFVRYINEDDAQKAIT 61
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M+ DGR I V+ A
Sbjct: 62 AMNNVEFDGRQIRVDKASD 80
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 51/78 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+ V+ L + SE +R AF+ FG++ EV+L +DK++ + +GFAF+ Y +++ +A
Sbjct: 214 RILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAFNE 273
Query: 139 MHGKFLDGRVIFVEIAKS 156
M G+ + GR+I V AK+
Sbjct: 274 MDGQVIKGRIIHVNYAKA 291
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+R+ V GL +E +++ AFQ FG + + LV K R FAFL ++TE E++ AIE
Sbjct: 2 SRIIVKGLPHVATEKTIKEAFQSFGNITDCKLVRTK-EGVSREFAFLGFSTESEAQNAIE 60
Query: 138 GMHGKFLDGRVIFVEIAK 155
M+ ++ I V IAK
Sbjct: 61 KMNNAYILSSKINVSIAK 78
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+L V L F T+ + +R F+ +G L V V KI + +G+AF+ YAT++E+ A
Sbjct: 604 TKLLVKNLPFETNLNEVRELFRVYGTLRGVR-VPKKIDGQLKGYAFIEYATKQEAANAKA 662
Query: 138 GMHGKFLDGRVIFVEIAK 155
M L GR + +E AK
Sbjct: 663 AMANSHLYGRHLVIEFAK 680
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L++ ++ +T+ED+LR F +GQ+ V++ + +++ F FL +A + A++
Sbjct: 509 LYIKNVNPKTTEDTLRKVFTQYGQIHSVSISKNPTSSK-NVFCFLEFARHSSALNAMKNA 567
Query: 140 HGKFLDGRVIFVEIA 154
G+ +DG I +E++
Sbjct: 568 QGQLVDGNAIAIELS 582
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|351725469|ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine max]
gi|5726567|gb|AAD48471.1|AF169205_1 glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G++VE ++ D+ R RGF F+ +A+E+
Sbjct: 1 MASADVEYRCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQ 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
+ AI M+G+ LDGR I V A+
Sbjct: 61 SMKDAIGAMNGQNLDGRNITVNEAQ 85
>gi|6911146|gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 54/86 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T++ SL AF +G+++E ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
+ AI GM+G+ LDGR I V A+S
Sbjct: 61 SMKDAIVGMNGQTLDGRNITVNEAQS 86
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 73 TCQPKTR----LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
+ QP+ R + V +SFRT+ D L F +G+++++ + D PRGFAF+RY
Sbjct: 9 SGQPENRESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 68
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAK 155
E+E+R AI+G+ G DGR + V+ AK
Sbjct: 69 EDEARDAIDGLDGXRFDGRALMVQFAK 95
>gi|223940412|ref|ZP_03632265.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223890907|gb|EEF57415.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 118
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV L F T+E+ L++ F G G ++ VN++ D+ R RGFAF+ ++ E+ A+
Sbjct: 3 TKLFVGNLPFSTTENDLQDHFSGAGTVIAVNIMQDRATGRSRGFAFIEMGSQAEADAAVA 62
Query: 138 GMHGKFLDGRVIFVEIAKSRAE 159
HGK GR + V A+ R E
Sbjct: 63 QYHGKEFQGRALTVNEARPREE 84
>gi|358367775|dbj|GAA84393.1| glycine-rich RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 117
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T++D+LR F +G + E +V D +R RGF F+R+A++ E+ A+
Sbjct: 2 SKLFIGGLAWHTTDDTLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDAEADAAMN 61
Query: 138 GMHGKFLDGRVIFVEIA 154
M+ + DGRVI V+ A
Sbjct: 62 AMNNQEFDGRVIRVDKA 78
>gi|67483728|ref|XP_657084.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474323|gb|EAL51698.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705266|gb|EMD45349.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 136
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 57/82 (69%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
TRL++ L++ +++SL+ AF+ FG + + +V D+ + R +GF F+ + +E++++AIE
Sbjct: 2 TRLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIE 61
Query: 138 GMHGKFLDGRVIFVEIAKSRAE 159
M+ + L+GR I V++++ R E
Sbjct: 62 EMNEQELEGRRIKVDVSRPREE 83
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 136 IEGMHGKFLDGRVIFVEIAKSRAELR 161
+ M+GK +DGR I V+ A ++ R
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|407929404|gb|EKG22234.1| hypothetical protein MPH_00413 [Macrophomina phaseolina MS6]
Length = 159
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T + +LR F+ FGQ+ E +V D+ R RGF F+R+ E ++ AI+
Sbjct: 2 SKLFIGGLAWHTDDATLRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTQESDAEAAIQ 61
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
M+ DGR I V+ A R+
Sbjct: 62 AMNNVEFDGRTIRVDKASDRS 82
>gi|326504184|dbj|BAJ90924.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P +++D L QG + L P +T P LFV+ L++ T
Sbjct: 92 PVPTCETKAEKKDRIRKLKLEQGADK-VAKELQNYNPQSDPNTTSDPYKTLFVARLNYET 150
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVI 149
SE ++ F+ +G + V LV DK N+PRG+AF+ Y + + A + G+ +D + +
Sbjct: 151 SESRVKREFEAYGPIKRVRLVTDKDTNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNKRV 210
Query: 150 FVEIAKSR 157
V++ + R
Sbjct: 211 LVDVERGR 218
>gi|799015|emb|CAA89058.1| putative glycine rich RNA binding protein [Solanum tuberosum]
Length = 175
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T++ +L +AF + ++VE ++ D+ R RGF F+ + E+ R AIEG
Sbjct: 7 RCFVGGLAWATTDQTLSDAFSQYAEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 139 MHGKFLDGRVIFVEIAKSRA 158
M+ + LDGR I V A+SR
Sbjct: 67 MNRQDLDGRNITVNEAQSRG 86
>gi|115480914|ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
gi|78707654|gb|ABB46629.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113638659|dbj|BAF25964.1| Os10g0115600 [Oryza sativa Japonica Group]
Length = 463
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P +++D L QG + L P +T P LFV+ L++ T
Sbjct: 92 PVPTCETKAEKKDRIRKSKLDQGAAK-VAEELQKYDPQSDPNATGDPYKTLFVARLNYET 150
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVI 149
SE ++ F+ +G + V LV DK N+PRG+AF+ Y + + A + G+ +D R +
Sbjct: 151 SEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNRRV 210
Query: 150 FVEIAKSR 157
V++ + R
Sbjct: 211 LVDVERGR 218
>gi|87130529|gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
Group]
Length = 463
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P +++D L QG + L P +T P LFV+ L++ T
Sbjct: 92 PVPTCETKAEKKDRIRKSKLDQGAAK-VAEELQKYDPQSDPNATGDPYKTLFVARLNYET 150
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVI 149
SE ++ F+ +G + V LV DK N+PRG+AF+ Y + + A + G+ +D R +
Sbjct: 151 SEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNRRV 210
Query: 150 FVEIAKSR 157
V++ + R
Sbjct: 211 LVDVERGR 218
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c [Taeniopygia
guttata]
Length = 175
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++ A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 136 IEGMHGKFLDGRVIFVEIAKSRAE 159
+ M+GK +DGR I V+ A +E
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKSSE 87
>gi|428165677|gb|EKX34667.1| hypothetical protein GUITHDRAFT_119213 [Guillardia theta CCMP2712]
Length = 219
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFV L FR SE L+ F+ G++V V+L+ D+ + RPRGF F+ Y E+ ++ A+ +
Sbjct: 137 LFVGNLPFRISEAELQALFEKHGEVVSVSLIHDQESGRPRGFGFVDYDNEQSAKDAVSNL 196
Query: 140 HGKFLDGRVIFVEIAKSR 157
+G LDGR I V I++ +
Sbjct: 197 NGMPLDGREISVSISEDK 214
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus glaber]
Length = 167
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDSR 89
>gi|348550387|ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Cavia porcellus]
Length = 173
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LF+ GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFIGGLSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAE 159
A+ M+GK +DGR I V+ A A+
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKAAD 87
>gi|2826811|emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LF+ GLS+ T + SLR+AF FG +V+ +++D+ R RGF F+ + E + AI
Sbjct: 35 TKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 94
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M GK L+GR I V A R
Sbjct: 95 EMDGKELNGRHIRVNPANDR 114
>gi|197632397|gb|ACH70922.1| elongation factor-1 delta-1 [Salmo salar]
Length = 203
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GL F T E SL AF +G + +V++V D+ R RGF F+ + E+++ A
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ M+GK +DGR+I V+ A
Sbjct: 63 MAAMNGKSVDGRMIRVDEA 81
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|30682622|ref|NP_849377.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657934|gb|AEE83334.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 153
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ P+ + S +ST +LF+ GLS+ T + SLR+AF FG +V+
Sbjct: 11 LRQNISSNGNVPVTSMLGSLRLMST-----KLFIGGLSWGTDDASLRDAFAHFGDVVDAK 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+++D+ R RGF F+ + E + AI M GK L+GR I V A R
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114
>gi|15236359|ref|NP_193121.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|25090505|sp|Q9SVM8.1|GRP2_ARATH RecName: Full=Glycine-rich RNA-binding protein 2, mitochondrial;
Short=AtGRP2; Flags: Precursor
gi|4455314|emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|7268089|emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|18252853|gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|21553749|gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|25084267|gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|332657933|gb|AEE83333.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 158
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ P+ + S +ST +LF+ GLS+ T + SLR+AF FG +V+
Sbjct: 11 LRQNISSNGNVPVTSMLGSLRLMST-----KLFIGGLSWGTDDASLRDAFAHFGDVVDAK 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+++D+ R RGF F+ + E + AI M GK L+GR I V A R
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114
>gi|145333039|ref|NP_001078385.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657935|gb|AEE83335.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 144
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ P+ + S +ST +LF+ GLS+ T + SLR+AF FG +V+
Sbjct: 11 LRQNISSNGNVPVTSMLGSLRLMST-----KLFIGGLSWGTDDASLRDAFAHFGDVVDAK 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+++D+ R RGF F+ + E + AI M GK L+GR I V A R
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114
>gi|145333041|ref|NP_001078386.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657936|gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 129
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 49 LRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
LRQ P+ + S +ST +LF+ GLS+ T + SLR+AF FG +V+
Sbjct: 11 LRQNISSNGNVPVTSMLGSLRLMST-----KLFIGGLSWGTDDASLRDAFAHFGDVVDAK 65
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+++D+ R RGF F+ + E + AI M GK L+GR I V A R
Sbjct: 66 VIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114
>gi|145218978|ref|YP_001129687.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
gi|145205142|gb|ABP36185.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 89
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V L + +ED LR+ F FGQ+ N++ DK + R +GF F+ + E+R AIE M
Sbjct: 3 IYVGNLPYSITEDDLRDTFSAFGQVDSANIITDKFSGRSKGFGFVDMPNDSEAREAIESM 62
Query: 140 HGKFLDGRVIFV 151
H K L GR I V
Sbjct: 63 HEKELSGRTITV 74
>gi|209154454|gb|ACI33459.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 206
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GL F T E SL AF +G + +V++V D+ R RGF F+ + E+++ A
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ M+GK +DGR+I V+ A
Sbjct: 63 MAAMNGKSVDGRMIRVDEA 81
>gi|402217291|gb|EJT97372.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 167
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 54/76 (71%)
Query: 82 VSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHG 141
+ LS+ T++D+LR+AF FGQ+++ ++ D+ + R RGF F+ + T +E++ AI+G++
Sbjct: 17 IGNLSWNTNDDTLRSAFSQFGQVLDCIVMKDRESGRSRGFGFVTFGTSQEAQAAIDGLNE 76
Query: 142 KFLDGRVIFVEIAKSR 157
+ LDGR I V +A +R
Sbjct: 77 QDLDGRRIRVNLANAR 92
>gi|255561192|ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
gi|223539286|gb|EEF40879.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
Length = 506
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 57 ACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIAN 116
A L P+ + P LFV+ L++ T+E ++ F+ +G + V L+ DK AN
Sbjct: 117 AAEELQKYDPNSDPNISGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKAAN 176
Query: 117 RPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+PRG+AF+ Y + + A + G+ LDGR + V++ + R
Sbjct: 177 KPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 217
>gi|302791061|ref|XP_002977297.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
gi|300154667|gb|EFJ21301.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
Length = 180
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GLS+ T++ SL AF+ +G ++E +V D+ NR RGF F+ + EE AI
Sbjct: 6 RCFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAIRK 65
Query: 139 MHGKFLDGRVIFVEIAK 155
MH + L+GR I V A+
Sbjct: 66 MHNQELEGRSITVSKAE 82
>gi|223936242|ref|ZP_03628155.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223895104|gb|EEF61552.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 103
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+L+V LSF+ +E+ +++ F G + EVNL+MDK+ R RGF F+ AT E + AI
Sbjct: 3 TKLYVGNLSFKATENDIQDLFSAHGPVNEVNLIMDKMTGRARGFGFVTMATAEGAEAAIA 62
Query: 138 GMHGKFLDGRVIFVEIAK 155
++GK GR + V A+
Sbjct: 63 DLNGKEWQGRALTVNEAR 80
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 14 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 73
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 74 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 101
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|209737234|gb|ACI69486.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 146
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GL F T E SL AF +G + +V++V D+ R RGF F+ + E+++ A
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ M+GK +DGR+I V+ A
Sbjct: 63 MAAMNGKSVDGRMIRVDEA 81
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 73 TCQPKTR----LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
+ QP+ R + V +SFRT+ D L F +G+++++ + D PRGFAF+RY
Sbjct: 9 SGQPENRESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 68
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAK 155
E+E+R AI+G+ G DGR + V+ AK
Sbjct: 69 EDEARDAIDGLDGMRFDGRALMVQFAK 95
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|392570008|gb|EIW63181.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 126
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 55/80 (68%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+++V LS+ T++DSLR+AF +GQ+++ ++ D+ R RGF F+ +++ E++ AI
Sbjct: 3 TKVYVGNLSWNTTDDSLRSAFSNYGQILDSIVMRDRDTGRSRGFGFVTFSSSGEAQTAIS 62
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
++ + LDGR I V +A +R
Sbjct: 63 SLNEQELDGRRIKVNLANAR 82
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum CS3096]
Length = 128
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 54/80 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++L+V LS+ T++D+LR F FG++ + ++ D+ R RGF F+ ++TEE++ A++
Sbjct: 2 SKLYVGNLSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVD 61
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
++ + LDGR I V +A +R
Sbjct: 62 ALNEQELDGRRIRVNVANAR 81
>gi|46115998|ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
Length = 1163
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 53/79 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V L + T++DSLRNAFQ +GQ+++ ++ D+ R RGF F+ + + +E+ AI
Sbjct: 4 KVYVGNLGWNTTDDSLRNAFQDYGQILDSIVMRDRDTGRSRGFGFVTFGSSQEAETAIIS 63
Query: 139 MHGKFLDGRVIFVEIAKSR 157
++ + LDGR I V +A +R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|359688008|ref|ZP_09258009.1| RNP-1 like RNA-binding protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 100
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GLS+ T++ +LR F+ G + E N+V+D+ R RGF F+ + + + A+
Sbjct: 3 SKLFVGGLSWSTTDLTLRQVFETHGAIQEANIVVDRETGRSRGFGFVTFVDQSSANAAVS 62
Query: 138 GMHGKFLDGRVIFVEIA--KSRAE 159
++GK LDGR I V +A KSR++
Sbjct: 63 ELNGKDLDGRNIVVSVAEDKSRSD 86
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|431915005|gb|ELK15824.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 390
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G ++EV L+ D+ NR RGFAF+ + E+++ A +
Sbjct: 9 KLFIGGLNIDTNEKALEAVFGKYGPIIEVLLMKDRETNRSRGFAFITFENPEDAKDATKD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG++I VE A
Sbjct: 69 MNGKSLDGKLIKVEQA 84
>gi|340382789|ref|XP_003389900.1| PREDICTED: hypothetical protein LOC100635457 [Amphimedon
queenslandica]
Length = 387
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+ PS S + P LFV ++F TSE LR F+ +G + +N+V D + +PRG
Sbjct: 85 IETWDPSNDSKISGDPFKTLFVGRINFDTSEGKLRREFESYGPVKRINIVSDPKSGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+AF+ Y E + A + GK +DG+ + V++ + R
Sbjct: 145 YAFVEYENERDMHSAYKYADGKKIDGKRVVVDVERGRT 182
>gi|381206512|ref|ZP_09913583.1| RNA-binding protein [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 85
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V L+F SED LR+AF FG++ + +++MD++ NR +GF F+ E A+E +
Sbjct: 3 IYVGNLAFSVSEDQLRSAFSQFGKVSKASVIMDRVNNRSKGFGFVEMDDAAEGNSAVEAL 62
Query: 140 HGKFLDGRVIFVEIAKSRAELR 161
+G +DGR V AK R + R
Sbjct: 63 NGHQIDGRAWKVNEAKPREKSR 84
>gi|302780311|ref|XP_002971930.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
gi|300160229|gb|EFJ26847.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
Length = 173
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R F+ GLS+ T++ SL AF+ +G ++E +V D+ NR RGF F+ + EE AI
Sbjct: 6 RCFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAIRK 65
Query: 139 MHGKFLDGRVIFVEIAK 155
MH + L+GR I V A+
Sbjct: 66 MHNQELEGRSITVSKAE 82
>gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 156
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ + R FV GL++ T++ +L AF FG++++ ++ D+ R RGF F+ + E+ R
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMR 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAK 155
AIEGM+G+ LDGR I V A+
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQ 83
>gi|356538168|ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Glycine max]
Length = 465
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P T ++R L +G + A L P + P LFV+ LS+ T
Sbjct: 94 PVPETETPAQKRARIHKLRLEKGAAK-AAEELEKYDPHNDPNVSGDPYKTLFVAKLSYET 152
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVI 149
+E ++ F+ +G + V LV DK N+PRG+AF+ Y + + A + G+ +DGR +
Sbjct: 153 TESRIKREFESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRV 212
Query: 150 FVEIAKSR 157
V++ + R
Sbjct: 213 LVDVERGR 220
>gi|297825019|ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
gi|297326231|gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +V+ ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEYRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
+ AIEGM+G+ LDGR I V A+
Sbjct: 61 SMKDAIEGMNGQELDGRSITVNEAQ 85
>gi|829254|emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LF+ GLS+ T + SLR+AF FG +V+ +++D+ R RGF F+ + E + AI
Sbjct: 16 TKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 75
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M GK L+GR I V A R
Sbjct: 76 EMDGKELNGRHIRVNPANDR 95
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F +G++V++ + D+ RGFAF+RY E+E+++A++ +
Sbjct: 19 LLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 78
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 79 DGRLVDGREIMVQFAK 94
>gi|356526775|ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 146
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+LFV+GLS+ T+E LR+AF G+++EV ++ D + + RG+ F+R+ +E +
Sbjct: 55 HSSIKLFVTGLSYDTNEPVLRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFLSETIAAA 114
Query: 135 AIEGMHGKFLDGRVIFVEIA 154
+ M+G+ LDGR I V A
Sbjct: 115 THKEMNGQILDGRCIRVSYA 134
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus leucogenys]
Length = 144
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|383847362|ref|XP_003699323.1| PREDICTED: probable RNA-binding protein 19-like [Megachile
rotundata]
Length = 886
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+FV LS+ T+ED +R F+ +G L EVNL +DK+ +P+GF + + E + +A
Sbjct: 351 RMFVRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDKVTRKPKGFGTITFLMPEHAVKAYSE 410
Query: 139 MHGKFLDGRVIFVEIAKSRA 158
+ G LDGR++ + K+++
Sbjct: 411 LDGSILDGRMLHLLPGKAKS 430
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP-----RGFAFLRYATEE 130
P T LFV ++F T+E+ L + F G L ++ K P G+ F+RY +
Sbjct: 661 PDTTLFVKNINFATTEEQLHSYFSKCGPLSYASIATKKDVKNPGGKLSMGYGFVRYKRKA 720
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKN 166
++ RA++ + LDG+ + E+ +S L N
Sbjct: 721 DADRALKVLQMTVLDGKTL--ELKRSERTLTTDVTN 754
>gi|388858327|emb|CCF48115.1| related to glycine-rich RNA-binding protein [Ustilago hordei]
Length = 193
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ T++DSL +AF +GQL + ++ D+ R RGF F+ +AT+ E+ AI
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAA 63
Query: 139 MHGKFLDGRVIFVEIAKSR 157
++ + LDGR I V +A SR
Sbjct: 64 LNEQELDGRRIRVNMANSR 82
>gi|30692254|ref|NP_849523.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661645|gb|AEE87045.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 126
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R FV GL++ T+++ L+ F FG +++ ++ D+ + R RGF F+ + E+ R
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AIE M+GK LDGRVI V A+
Sbjct: 63 AIEEMNGKELDGRVITVNEAQ 83
>gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|544425|sp|Q03251.1|GRP8_ARATH RecName: Full=Glycine-rich RNA-binding protein 8; AltName:
Full=Protein CCR1
gi|16305|emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
gi|166658|gb|AAA20201.1| ORF [Arabidopsis thaliana]
gi|166839|gb|AAA32854.1| RNA-binding protein [Arabidopsis thaliana]
gi|4914438|emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|7270909|emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|222423067|dbj|BAH19515.1| AT4G39260 [Arabidopsis thaliana]
gi|332661644|gb|AEE87044.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 169
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R FV GL++ T+++ L+ F FG +++ ++ D+ + R RGF F+ + E+ R
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AIE M+GK LDGRVI V A+
Sbjct: 63 AIEEMNGKELDGRVITVNEAQ 83
>gi|356538166|ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Glycine max]
Length = 482
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P T ++R L +G + A L P + P LFV+ LS+ T
Sbjct: 94 PVPETETPAQKRARIHKLRLEKGAAK-AAEELEKYDPHNDPNVSGDPYKTLFVAKLSYET 152
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVI 149
+E ++ F+ +G + V LV DK N+PRG+AF+ Y + + A + G+ +DGR +
Sbjct: 153 TESRIKREFESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRV 212
Query: 150 FVEIAKSR 157
V++ + R
Sbjct: 213 LVDVERGR 220
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F +G++V++ + D+ RGFAF+RY E+E+++A+E +
Sbjct: 19 LLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVERL 78
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 79 DGRLVDGREIMVQFAK 94
>gi|407410696|gb|EKF33036.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 477
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%)
Query: 70 SLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
S S Q +T LF+S + + + L N F +GQ++ ++ + G AF+RYAT
Sbjct: 107 SASDNQSRTNLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTGNSLGTAFVRYATT 166
Query: 130 EESRRAIEGMHGKFLDGRVIFVEIAKSR 157
EE+ RAIEGM GK + GR I V+ AK +
Sbjct: 167 EEAMRAIEGMSGKRIGGRAIAVQWAKKQ 194
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F +G++V++ + D+ RGFAF+RY E+E+++A++ +
Sbjct: 19 LLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 78
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 79 DGRLVDGREIMVQFAK 94
>gi|356519124|ref|XP_003528224.1| PREDICTED: uncharacterized protein LOC100801928 [Glycine max]
Length = 656
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P +RLF+ G+S+ SL +GQ+V+ ++MD+ R RGF F+ Y+ +E+ RA
Sbjct: 40 PNSRLFIGGVSYSIDAQSLGEICSQYGQVVDARIIMDRETGRHRGFGFITYSNVDEASRA 99
Query: 136 IEGMHGKFLDGRVIFVEIAKSRA 158
++ + G+ LDGR + V+ A R+
Sbjct: 100 LQALDGQDLDGRRVEVKFAIERS 122
>gi|344307815|ref|XP_003422574.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Loxodonta africana]
Length = 169
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|356558254|ref|XP_003547422.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
Length = 86
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV + T+++ L+ F FG + + +L +D I RP+GF F+ + +E E+ +A+
Sbjct: 7 TKLFVHRIMLYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIEAEKALR 66
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M+G+ + GR+I VE+A +
Sbjct: 67 AMNGRIVSGRLILVELANEK 86
>gi|357462205|ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 135
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LFV GLS+ E SL++AF FG + EV +V DK + R RGF F+ ++ E+ ++ A +
Sbjct: 36 NKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKD 95
Query: 138 GMHGKFLDGRVIFVEIA 154
M GK L GR + + A
Sbjct: 96 AMDGKALLGRPLRINFA 112
>gi|451853629|gb|EMD66922.1| hypothetical protein COCSADRAFT_168179 [Cochliobolus sativus
ND90Pr]
Length = 159
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LF+ GL++ T + +LR+ F+ FG + E +V D+ R RGF F+RYA E E+ A++
Sbjct: 2 AKLFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQ 61
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M+ + DGR I V+ A R
Sbjct: 62 AMNNEEFDGRRIRVDKASDR 81
>gi|332226186|ref|XP_003262269.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Nomascus
leucogenys]
Length = 1033
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 58/89 (65%), Gaps = 5/89 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLS +T E +L+ F +G+++EV L+ D+ N+ RGFAF+ + + ++ A
Sbjct: 9 KLFIGGLSLKTDEKALKAEFGKYGRIIEVFLMKDRETNKSRGFAFIIFESPADANAAARD 68
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQAFKNN 167
M+GK+LDG+ I V +A ++ AFK++
Sbjct: 69 MNGKYLDGKAIKVALA-----IKPAFKSS 92
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 55/90 (61%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV +SF+T+E LR AF+ +G++ + ++ D+ + RGFAF+ +E++ +AI G+
Sbjct: 4 VFVGNMSFQTTEGELRAAFETYGEIARIQIMTDRDTGQARGFAFVEMTNDEDAAKAIAGL 63
Query: 140 HGKFLDGRVIFVEIAKSRAELRQAFKNNPR 169
+G LDGR + V AK + + A N R
Sbjct: 64 NGTQLDGRALNVNEAKPKPQGGGARGGNDR 93
>gi|78185978|ref|YP_374021.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78165880|gb|ABB22978.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 99
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
K +++ L + SED LR+AF FGQ+ N++MDK + R +GF F+ +++E R AI
Sbjct: 9 KMNIYIGNLPYSVSEDDLRDAFSQFGQVDSANIIMDKFSGRSKGFGFVDMSSDEAGRAAI 68
Query: 137 EGMHGKFLDGRVIFV 151
E M+ + GR I V
Sbjct: 69 EAMNEQEFKGRTIKV 83
>gi|384488552|gb|EIE80732.1| hypothetical protein RO3G_05437 [Rhizopus delemar RA 99-880]
Length = 238
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 72 STCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEE 131
P LF++GL+ RT+ L + F +G++++ ++ D RGF F+R A E+
Sbjct: 55 ENTNPGDNLFITGLTIRTNGADLEDIFGKYGKVIKAEIMYDPHTRESRGFGFIRMANAED 114
Query: 132 SRRAIEGMHGKFLDGRVIFVEIAK 155
+ RA+ G+ G +DGRV+ VE AK
Sbjct: 115 AERALNGVSGTEIDGRVVTVEKAK 138
>gi|212274941|ref|NP_001130982.1| hypothetical protein [Zea mays]
gi|194690622|gb|ACF79395.1| unknown [Zea mays]
gi|413951564|gb|AFW84213.1| hypothetical protein ZEAMMB73_909652 [Zea mays]
Length = 142
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+RLFV+GLS+ E SL +AF FG + EV ++ DK + R RGF F+ ++ + E++ A +
Sbjct: 48 SRLFVAGLSWSVDERSLTDAFSSFGTVTEVRIMYDKNSGRSRGFGFVHFSNDNEAKCAKD 107
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
M GK + GR + + A R
Sbjct: 108 AMDGKVMLGRPLRISFALGR 127
>gi|146197791|dbj|BAF57614.1| snRNP70K protein [Dugesia japonica]
Length = 348
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
LA P+ T P LFV+ +++ T+E+ +R F+G+G + + +V + + N+PRG
Sbjct: 89 LALWNPNEIPSGTKDPYKTLFVARINYDTTENKIRREFEGYGPIKTIRMVKNAMNNKPRG 148
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+ F+ Y E + A + GK +DG + V++ ++R
Sbjct: 149 YCFIEYEHERDMHAAYKNADGKKIDGHRVLVDVERART 186
>gi|406985531|gb|EKE06283.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 83
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ LS+ + D LR F FG +++ ++MD++ R RGF F+ TEE++ +A+EG
Sbjct: 3 KLFIGNLSWEVTSDDLRAFFASFGTVIDAVVIMDRMTGRSRGFGFVEMETEEQANKALEG 62
Query: 139 MHGKFLDGRVIFVEIAK 155
+GK L GR + V +AK
Sbjct: 63 -NGKDLKGRAMNVNMAK 78
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIA 154
A+ M+GK +DGR I V+ A
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQA 82
>gi|260787130|ref|XP_002588608.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
gi|229273773|gb|EEN44619.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
Length = 130
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLS+ TSE SL AF FG + E ++ D R RGF F++++ E+ A +
Sbjct: 1 KLFVVGLSWGTSEASLCQAFSRFGTVTECKVIRDHWTGRSRGFGFVKFSAPSEADVARKD 60
Query: 139 MHGKFLDGRVIFVEIAKSR 157
MH + LDGR I V+ AK R
Sbjct: 61 MHFQHLDGRTIRVDYAKYR 79
>gi|397467532|ref|XP_003805466.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Pan
paniscus]
Length = 393
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL+ +T E +L+ F +G +++V L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFVGGLNLKTDEKALKAEFGKYGHIIKVFLIKDRKTNKSRGFAFVTFESPADAKAAARD 68
Query: 139 MHGKFLDGRVIFV 151
M+GK+LDG+ I V
Sbjct: 69 MNGKYLDGKAIMV 81
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix jacchus]
Length = 172
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIA 154
A+ M+GK +DGR I V+ A
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQA 82
>gi|168036414|ref|XP_001770702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678063|gb|EDQ64526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GLS+ T++ L F+ FG ++E +++DK RGF F+ + E AIE
Sbjct: 8 RCFVGGLSWNTTDKGLEEEFRHFGNVLEAKVIVDKETGHSRGFGFVNFGDERSMEEAIER 67
Query: 139 MHGKFLDGRVIFVEIAK 155
+HGK LDGR I V AK
Sbjct: 68 LHGKELDGRPITVNRAK 84
>gi|327405345|ref|YP_004346183.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
gi|327320853|gb|AEA45345.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
Length = 224
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T +FV+ L F T+E+ L++ F+ +G++ V + D+ +PRGFAF+ A E E+ +AIE
Sbjct: 2 TSIFVAKLDFNTTEEQLKSLFEDYGKVNRVTIAKDRETGKPRGFAFVEMADESEADKAIE 61
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
+ ++GR I V+ A RA
Sbjct: 62 ALDDSSVNGRNIAVKKADDRA 82
>gi|242074112|ref|XP_002446992.1| hypothetical protein SORBIDRAFT_06g026496 [Sorghum bicolor]
gi|241938175|gb|EES11320.1| hypothetical protein SORBIDRAFT_06g026496 [Sorghum bicolor]
Length = 80
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%)
Query: 107 VNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQAF 164
V LVMD++ANRPRGFAFL Y EEE+R A+EGMHGK D +++ I R L F
Sbjct: 14 VCLVMDRVANRPRGFAFLSYTEEEEARGAMEGMHGKVKDFQIVRCIICACRLCLYLTF 71
>gi|544421|sp|Q99069.1|GRP1_SORBI RecName: Full=Glycine-rich RNA-binding protein 1
gi|21623|emb|CAA40863.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 142
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 DSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFV 151
+SL +AF +G+++E +++D+ R RGF F+ ++TEE R AIEGM+GK LDGR I V
Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITV 60
Query: 152 EIAKS 156
A+S
Sbjct: 61 NEAQS 65
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur garnettii]
Length = 172
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LF+ GLSF T+E SL F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFIGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+T L+V+ L +ED L N F G +V++NL+ DKI PRG AF+R+ EE+ AI
Sbjct: 112 ETNLYVTNLPRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEALAAI 171
Query: 137 EGMHGKFLDGRV--IFVEIAKSRAELRQAF 164
E ++G GR I V+IA+ + + A+
Sbjct: 172 EHLNGTIPHGRTNPISVKIAEEHGKQKAAY 201
>gi|160899081|ref|YP_001564663.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333914782|ref|YP_004488514.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160364665|gb|ABX36278.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333744982|gb|AEF90159.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 115
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+++V L + ++ SL + F FG + ++MD+ R +GF F+ A+ E ++ AI
Sbjct: 3 TKIYVGNLPYSVTDSSLESNFAEFGNVASAKVMMDRETGRSKGFGFVEMASAEVAQAAIT 62
Query: 138 GMHGKFLDGRVIFVEIAKSRAELRQAFKNNPR 169
G+HG +DGR I V +A+ R E R + +P+
Sbjct: 63 GLHGMSVDGRSIVVNLARPREEGRSSGGYSPQ 94
>gi|393245114|gb|EJD52625.1| hypothetical protein AURDEDRAFT_111257 [Auricularia delicata
TFB-10046 SS5]
Length = 103
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 56/80 (70%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++++V LS+ T++++LR+AFQ FGQ+++ ++ D+ R RGF F+ + + +E+ AI+
Sbjct: 3 SKVYVGNLSWNTTDETLRSAFQDFGQILDSIVMRDRDTGRSRGFGFVTFGSPQEADSAIQ 62
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
++ + LDGR I V +A +R
Sbjct: 63 ALNDQELDGRRIKVNLANAR 82
>gi|148702008|gb|EDL33955.1| mCG116386, isoform CRA_e [Mus musculus]
Length = 179
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 53 RGRGACFPLA-CLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVM 111
R R C PL P ++S+ + K LFV GL+F T E +L + F FG + EV +V
Sbjct: 7 RARRLCRPLTFNFQDLPSAMSSEEGK--LFVGGLNFNTDEQALEDHFSSFGPISEVVVVK 64
Query: 112 DKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
D+ R RGF F+ + E + A+ M+G+ LDGR I V+ A A
Sbjct: 65 DRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGKSA 111
>gi|156376666|ref|XP_001630480.1| predicted protein [Nematostella vectensis]
gi|156217502|gb|EDO38417.1| predicted protein [Nematostella vectensis]
Length = 305
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLS+ T+++SL+ F +G+LV V++ MD + RPRGFAF+++ + E+ +
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADAVLNQ 89
Query: 139 MHGKFLDGRVI 149
+ LDGR I
Sbjct: 90 VDPHVLDGRTI 100
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAF-QGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++FV GL TS++ +R F + + + E+ + + +NR RGF F+ + +E+ + E
Sbjct: 118 KIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICE 177
>gi|320586919|gb|EFW99582.1| glycine-rich RNA-binding protein [Grosmannia clavigera kw1407]
Length = 462
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RYA E ++ AI
Sbjct: 283 AKLFIGGLAWHTEEGTLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYANEADAETAIA 342
Query: 138 GMHGKFLDGRVIFVEIA 154
M+ DGR I V+ A
Sbjct: 343 SMNNIEFDGRTIRVDRA 359
>gi|209976406|gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +V+ ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEFRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
+ AIEGM+G+ LDGR I V A+
Sbjct: 61 SMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|162455979|ref|YP_001618346.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161166561|emb|CAN97866.1| putative RNA-binding protein [Sorangium cellulosum So ce56]
Length = 123
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFG-QLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
RL+V L+F ++EDSLR AF+G G +++ + L+ D++ + RGF F+ ++ +++ AI
Sbjct: 4 RLYVGNLAFHSTEDSLRTAFEGAGVEVLSIQLMTDRMTGQSRGFGFVE-VSDAQAQAAIN 62
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
+HGK LDGR + V A+ R
Sbjct: 63 ALHGKDLDGRTLTVNEARER 82
>gi|440793266|gb|ELR14453.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 273
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
T P L+V+GL+ RT E L F FG++V+ +LV D RGFAF+ ++ E+
Sbjct: 96 TINPGDTLYVTGLASRTREADLERKFSKFGEVVKAHLVCDPRTGDSRGFAFVTMGSDTEA 155
Query: 133 RRAIEGMHGKFLDGRVIFVEIAK 155
+ A+EG + LDGR+I VE +K
Sbjct: 156 QDAMEGGNRTELDGRIISVEKSK 178
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDKL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ LDGR I V+ AK
Sbjct: 78 DGRMLDGREIMVQFAK 93
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GL F T E SL AF +G + +V++V D+ R RGF F+ + E+++ A
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ M+GK +DGR+I V+ A
Sbjct: 63 MAAMNGKSVDGRMIRVDEA 81
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDKL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ LDGR I V+ AK
Sbjct: 78 DGRMLDGREIMVQFAK 93
>gi|262196624|ref|YP_003267833.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262079971|gb|ACY15940.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 125
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
++FV GLS+ T + SLR AF+ FG + E ++ D+ R RGF F+ +A ++ AIE
Sbjct: 4 KIFVGGLSWDTDDSSLRAAFERFGAVTEAKVITDRDTGRSRGFGFVTFAESGQAAAAIEE 63
Query: 139 MHGKFLDGRVIFVEIAKSRA 158
M G LDGR I V A+ R+
Sbjct: 64 MDGVELDGRNIRVNEAQERS 83
>gi|6273331|gb|AAF06329.1|AF191305_1 glycine-rich RNA binding protein, partial [Medicago sativa]
Length = 105
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ R FV GL++ T D+L AF +G++V+ ++ D+ R RGF F+ +A E+ I
Sbjct: 5 EDRCFVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDVI 64
Query: 137 EGMHGKFLDGRVIFVEIAK 155
E M+G+ LDGR I V A+
Sbjct: 65 EAMNGQDLDGRNITVNQAQ 83
>gi|356563602|ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Glycine max]
Length = 160
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
++FV GL TSE L F FG++ + L +DK + + GFA++ + EE ++ A+
Sbjct: 69 KIFVKGLPLSTSEGHLMKVFSEFGEVTLIQLPIDKESGQSLGFAYIWFVKEESAQLAVLE 128
Query: 139 MHGKFLDGRVIFVEIAK 155
M+GKF GR I+V IAK
Sbjct: 129 MNGKFFYGRFIYVTIAK 145
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 73 TCQPKTR----LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
+ QP+ R L V +SFRT+ D L F +G+++++ + D PRGFAF+RY
Sbjct: 7 SGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 66
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAK 155
E+E++ AI+G+ G DGR + V+ AK
Sbjct: 67 EDEAQDAIDGLDGMRFDGRALMVQFAK 93
>gi|378727388|gb|EHY53847.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 179
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T++++L F FG + E +V D+ NR RGF F+R+AT+ E+ A++
Sbjct: 3 KLFIGGLAWHTTDETLYEGFSQFGNIEEAVVVKDRDTNRSRGFGFVRFATKAEADEAMQR 62
Query: 139 MHGKFLDGRVIFVEIAKS 156
M+ DGR+I V+ A+
Sbjct: 63 MNNTQFDGRLIRVDHAQD 80
>gi|226507640|ref|NP_001146692.1| uncharacterized protein LOC100280293 [Zea mays]
gi|219888359|gb|ACL54554.1| unknown [Zea mays]
gi|413934065|gb|AFW68616.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934066|gb|AFW68617.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934067|gb|AFW68618.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
Length = 453
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ +LF+ G+S+ T+E+ L F +G++ + ++ DKI RPRGF F+ +A RA+
Sbjct: 5 QGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAVDRAL 64
Query: 137 EGMHGKFLDGRVIFVEIAKSRAELRQAFKNNP 168
+ H LDGR + V+ A SR E + + NP
Sbjct: 65 QDPH--TLDGRTVDVKRALSREEQQASKAANP 94
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++FV GL +ED R F+ FG + +V ++ D+ RPRGF F+ + +E+ R ++
Sbjct: 119 KIFVGGLPSTLTEDGFRQYFETFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDRVLQ 177
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea mays]
Length = 129
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 73 TCQPKTR----LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
+ QP+ R L V +SFRT+ D L F +G+++++ + D PRGFAF+RY
Sbjct: 9 SGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 68
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAK 155
E+E++ AI+G+ G DGR + V+ AK
Sbjct: 69 EDEAQDAIDGLDGMRFDGRALMVQFAK 95
>gi|408393961|gb|EKJ73218.1| hypothetical protein FPSE_06642 [Fusarium pseudograminearum CS3096]
Length = 112
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 52/78 (66%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L++ LS+ T++D+LRNA Q FG +++ ++ D+ R RGF F+ + + EE+ A+ G
Sbjct: 4 KLYIGNLSWNTTDDTLRNACQEFGMIIDSIVMRDRDTGRSRGFGFVTFGSVEEAENAVNG 63
Query: 139 MHGKFLDGRVIFVEIAKS 156
++ + LDGR I V +A +
Sbjct: 64 LNEQELDGRRIKVNMANA 81
>gi|307173080|gb|EFN64210.1| U1 small nuclear ribonucleoprotein 70 kDa [Camponotus floridanus]
Length = 409
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ S T P LFV+ +++ TSE LR F+ +G + ++ ++ + I +PRG
Sbjct: 85 IAVWDPAGISNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+AF+ Y E + A + GK +DGR + V++ ++R
Sbjct: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERART 182
>gi|24214620|ref|NP_712101.1| RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45657838|ref|YP_001924.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116328465|ref|YP_798185.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331197|ref|YP_800915.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|359685806|ref|ZP_09255807.1| RNA-binding protein [Leptospira santarosai str. 2000030832]
gi|359726906|ref|ZP_09265602.1| RNA-binding protein [Leptospira weilii str. 2006001855]
gi|386074008|ref|YP_005988325.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|398332637|ref|ZP_10517342.1| RNA-binding protein [Leptospira alexanderi serovar Manhao 3 str. L
60]
gi|410450551|ref|ZP_11304588.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|417760452|ref|ZP_12408475.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|417765544|ref|ZP_12413504.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417775540|ref|ZP_12423393.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|417781669|ref|ZP_12429418.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|417783687|ref|ZP_12431403.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|418668620|ref|ZP_13230020.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418672853|ref|ZP_13234186.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|418684012|ref|ZP_13245203.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418693004|ref|ZP_13254073.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|418696158|ref|ZP_13257167.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|418699596|ref|ZP_13260554.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418704274|ref|ZP_13265152.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418710854|ref|ZP_13271620.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418716814|ref|ZP_13276777.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|418719262|ref|ZP_13278462.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|418726301|ref|ZP_13284912.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|418734639|ref|ZP_13291080.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|418739027|ref|ZP_13295420.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|418744825|ref|ZP_13301171.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|418755775|ref|ZP_13311971.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|421084617|ref|ZP_15545475.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|421094388|ref|ZP_15555106.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|421100627|ref|ZP_15561250.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|421103448|ref|ZP_15564047.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421113326|ref|ZP_15573770.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|421118783|ref|ZP_15579118.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421119714|ref|ZP_15580032.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|421126199|ref|ZP_15586437.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421137268|ref|ZP_15597355.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|422004225|ref|ZP_16351446.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|24195595|gb|AAN49119.1|AE011365_5 RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45601078|gb|AAS70561.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116121209|gb|ABJ79252.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116124886|gb|ABJ76157.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|353457797|gb|AER02342.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|400324233|gb|EJO76531.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400352243|gb|EJP04441.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400357111|gb|EJP13258.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|409943682|gb|EKN89276.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|409953074|gb|EKO07577.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|409955687|gb|EKO14619.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|409960211|gb|EKO23965.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|409963980|gb|EKO31880.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|410009807|gb|EKO67963.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410015637|gb|EKO77732.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|410018482|gb|EKO85320.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410347480|gb|EKO98377.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|410362810|gb|EKP13845.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|410366693|gb|EKP22082.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432901|gb|EKP77254.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|410436289|gb|EKP85407.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410574865|gb|EKQ37894.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|410580163|gb|EKQ47991.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|410744415|gb|EKQ93156.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|410745725|gb|EKQ98635.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410755352|gb|EKR16982.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410761438|gb|EKR27618.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410766007|gb|EKR36696.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410768454|gb|EKR43701.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410772759|gb|EKR52798.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|410778400|gb|EKR63029.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|410787585|gb|EKR81317.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|410794311|gb|EKR92220.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|410796430|gb|EKR98566.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|410801100|gb|EKS07274.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|417257025|gb|EKT86432.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|455666044|gb|EMF31517.1| hypothetical protein LEP1GSC201_1675 [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455791968|gb|EMF43753.1| hypothetical protein LEP1GSC067_3245 [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456821541|gb|EMF70047.1| hypothetical protein LEP1GSC148_0536 [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456861145|gb|EMF79850.1| hypothetical protein LEP1GSC188_1846 [Leptospira weilii serovar
Topaz str. LT2116]
gi|456874070|gb|EMF89395.1| hypothetical protein LEP1GSC005_1881 [Leptospira santarosai str.
ST188]
gi|456887997|gb|EMF99005.1| hypothetical protein LEP1GSC123_3441 [Leptospira borgpetersenii
str. 200701203]
Length = 91
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 49/75 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L+++ +ED LR AF+ FG++ V ++ DK++ + RG AF+ A +EE AI+G+
Sbjct: 3 IYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKEEGNAAIDGL 62
Query: 140 HGKFLDGRVIFVEIA 154
+G + GR I V A
Sbjct: 63 NGTQIRGREIKVNEA 77
>gi|357473263|ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507971|gb|AES89113.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 190
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+ + + R FV GL++ T +L AF FG++ + ++ D+ R RGF F+ +A E+
Sbjct: 1 MGSSDVEYRCFVGGLAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIE M+G+ +DGR I V A+S
Sbjct: 61 SMRDAIEEMNGQDIDGRNITVNEAQS 86
>gi|414867083|tpg|DAA45640.1| TPA: hypothetical protein ZEAMMB73_077445 [Zea mays]
gi|448878222|gb|AGE46074.1| arginine/serine-rich splicing factor SC26 transcript III [Zea mays]
Length = 198
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 73 TCQPKTR----LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
+ QP+ R L V +SFRT+ D L F +G+++++ + D PRGFAF+RY
Sbjct: 7 SGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 66
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIAK 155
E+E++ AI+G+ G DGR + V+ AK
Sbjct: 67 EDEAQDAIDGLDGMRFDGRALMVQFAK 93
>gi|168035555|ref|XP_001770275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678492|gb|EDQ64950.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T++ SL AF+ FG++V+ ++ D+ R RGF F+ +A E AI+
Sbjct: 3 RCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKD 62
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDGR I V A
Sbjct: 63 MNGKELDGRNITVNQA 78
>gi|12659074|gb|AAK01176.1| RNA-binding protein [Triticum aestivum]
Length = 183
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV LS+ T++ L++AF FG++ E +V+DK + R RGF F+ + ++ A+E
Sbjct: 8 RCFVGSLSWNTTDVDLKDAFGKFGRVTETKVVLDKFSGRSRGFGFVTFDDKKAMEEAVEA 67
Query: 139 MHGKFLDGRVIFVEIAKSRAELR 161
M+G LDGR I VE A+ + R
Sbjct: 68 MNGIDLDGRNITVERAQPQGSGR 90
>gi|260803001|ref|XP_002596380.1| hypothetical protein BRAFLDRAFT_215468 [Branchiostoma floridae]
gi|229281635|gb|EEN52392.1| hypothetical protein BRAFLDRAFT_215468 [Branchiostoma floridae]
Length = 85
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+T+L+V GL FR +ED + AF GQ+V+ L+ D+ + RGFAF+ ++ E+ + RA
Sbjct: 3 DRTKLYVGGLDFRMTEDDVYTAFSDHGQIVDCKLITDRETGKSRGFAFVTFSDEDSAARA 62
Query: 136 IEGMHGKFLDGRVIFVEIAK 155
+ + L RVI V +AK
Sbjct: 63 EKALDQTELGTRVINVSVAK 82
>gi|218199217|gb|EEC81644.1| hypothetical protein OsI_25179 [Oryza sativa Indica Group]
Length = 343
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+FV GLS+ T+E +L AF +G+++E +V+++ R RGF F+ ++ AI G
Sbjct: 8 RIFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRAVDAAIRG 67
Query: 139 MHGKFLDGRVIFVEIAKSR 157
MH LDGR I V A+ R
Sbjct: 68 MHNGELDGRTISVNKAQPR 86
>gi|119358437|ref|YP_913081.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
gi|119355786|gb|ABL66657.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
Length = 90
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L ++ +ED LR+AF FGQ+ N++ DK + R +GF F+ ++E+R AIE M
Sbjct: 3 IYIGNLPYQVTEDDLRDAFSQFGQVDSANIITDKFSGRSKGFGFVDMPHDDEAREAIESM 62
Query: 140 HGKFLDGRVIFV 151
+ K L GR I V
Sbjct: 63 NDKDLKGRTIKV 74
>gi|390432205|gb|AFL91694.1| glycine-rich RNA binding protein [Raphanus sativus var.
raphanistroides]
Length = 153
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +++ ++ D+ R RGF F+ + E+
Sbjct: 1 MASADVEYRCFVGGLAWATDDRALETAFSQYGDVLDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKS 156
R AIE M+G+ LDGR I V A+S
Sbjct: 61 SMRDAIEAMNGQDLDGRSITVNEAQS 86
>gi|310793386|gb|EFQ28847.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 171
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY + ++++AI
Sbjct: 2 SKLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQDGDAQKAIS 61
Query: 138 GMHGKFLDGRVIFVEIA 154
M+ DGR I V+ A
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|302788860|ref|XP_002976199.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
gi|300156475|gb|EFJ23104.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
Length = 343
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 54 GRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDK 113
GR LA + S + Q + +L++ GLS+ TS ++L N F +G++ E + DK
Sbjct: 147 GRITVCNLASVGTSGSGGTNDQAQRKLYIGGLSYETSNETLLNIFSKYGEIEEGAVAYDK 206
Query: 114 IANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIA 154
N+ RGFAF+ Y T E +R AI+ + K ++GR + V++A
Sbjct: 207 NTNKSRGFAFVTYKTVEAARNAIDDPN-KTIEGRHVIVKLA 246
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL++ T+ LR+AF+ FG++ E +++DK + RGF F+ + + ++RA++
Sbjct: 81 KLFVRGLAWETTSQDLRDAFEQFGEIEEGAVIIDKATGKSRGFGFITFKHMDSAQRALK- 139
Query: 139 MHGKFLDGRVIFVEIA 154
K +DGR+ +A
Sbjct: 140 EPSKTIDGRITVCNLA 155
>gi|226496531|ref|NP_001152123.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|195652939|gb|ACG45937.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 161
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 75 QPKTR----LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
QP+ R L V +SFRT+ D L F +G+++++ + D PRGFAF+RY E+
Sbjct: 9 QPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYED 68
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
E++ AI+G+ G DGR + V+ AK
Sbjct: 69 EAQDAIDGLDGMRFDGRALMVQFAK 93
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F +G++V++ + D+ RGFAF+RY E+E+++A++ +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRLVDGREIMVQFAK 93
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|193657247|ref|XP_001947021.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 397
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 35 PFTIKRRDFDSLFSLRQGRGRGACFPL----ACLPPSPHSLSTCQPKTRLFVSGLSFRTS 90
P TI+ ++ D L R+ + + L A P + + P LFV+ +++ TS
Sbjct: 56 PTTIETKE-DKLERRRREKAEQVAYKLEQEIAAWNPHSDANAVTDPFKTLFVARINYDTS 114
Query: 91 EDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIF 150
E LR F+ +G + ++ + +KI +PRG+AF+ Y E + A + GK +DGR +
Sbjct: 115 ESKLRREFELYGLIKKIVVTRNKIDGKPRGYAFIEYENERDMYSAYKYADGKKIDGRRVL 174
Query: 151 VEIAKSRA 158
V++ ++R
Sbjct: 175 VDVERART 182
>gi|168008942|ref|XP_001757165.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691663|gb|EDQ78024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 161
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GLS+ T++ L F+ FG ++E +++DK RGF F+ + E AIE
Sbjct: 8 RCFVGGLSWNTTDKGLEEEFRRFGNVLEAKVIVDKETGHSRGFGFVNFGDERSMDEAIER 67
Query: 139 MHGKFLDGRVIFVEIAK 155
+HGK LDGR I V AK
Sbjct: 68 LHGKELDGRPITVNRAK 84
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|21388660|dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T++ SL AF+ FG++V+ ++ D+ R RGF F+ +A E AI+
Sbjct: 6 RCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKD 65
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDGR I V A
Sbjct: 66 MNGKELDGRNITVNQA 81
>gi|312088239|ref|XP_003145783.1| hypothetical protein LOAG_10208 [Loa loa]
Length = 353
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ + +T P LFV+ +++ TSE LR F+ FG++ + LV DK +PRG
Sbjct: 127 IATWSPAQNPSATVDPYKTLFVARINYETSESKLRREFEQFGKITRLALVHDK-NGKPRG 185
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAE 159
+AF+ Y +E A + G +DGR + V+ + R +
Sbjct: 186 YAFIEYQHKESMSEAYKKADGMKIDGRRVVVDYERGRTQ 224
>gi|302785788|ref|XP_002974665.1| hypothetical protein SELMODRAFT_102224 [Selaginella moellendorffii]
gi|300157560|gb|EFJ24185.1| hypothetical protein SELMODRAFT_102224 [Selaginella moellendorffii]
Length = 232
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+C P L+V+GLS R +E L + F G++VE LV+D ++ RGF F+ + +++
Sbjct: 46 SCNPGNNLYVTGLSTRVTEKDLEDYFSKEGKVVECRLVVDPRSHESRGFGFVALESLDDA 105
Query: 133 RRAIEGMHGKFLDGRVIFVEIA-KSRA 158
R I+ +H L+GR+I VE A +SRA
Sbjct: 106 ERCIKRLHHSNLEGRIITVEKARRSRA 132
>gi|469071|dbj|BAA03742.1| RNA-binding glycine-rich protein-1b [Nicotiana sylvestris]
gi|295393565|gb|ADG03638.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 148
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 52/78 (66%)
Query: 81 FVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMH 140
FV GL++ T++ +L +AF +G++++ ++ D+ R RGF F+ + E+ R AIEGM+
Sbjct: 9 FVGGLAWATTDRTLADAFGTYGEVLDSKIINDRETGRSRGFGFVTFKDEKCMRDAIEGMN 68
Query: 141 GKFLDGRVIFVEIAKSRA 158
G+ LDGR I V A++R
Sbjct: 69 GQELDGRSITVNEAQARG 86
>gi|6680946|ref|NP_031731.1| cold-inducible RNA-binding protein [Mus musculus]
gi|346644681|ref|NP_001231002.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|46395643|sp|P60826.1|CIRBP_CRIGR RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|1060919|dbj|BAA11213.1| CIRP [Mus musculus]
gi|1783168|dbj|BAA19092.1| CIRP [Rattus norvegicus]
gi|12852647|dbj|BAB29491.1| unnamed protein product [Mus musculus]
gi|34099624|gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
gi|49522692|gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
gi|74209036|dbj|BAE21245.1| unnamed protein product [Mus musculus]
gi|115345819|gb|ABI95367.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|148699640|gb|EDL31587.1| cold inducible RNA binding protein, isoform CRA_c [Mus musculus]
gi|149034580|gb|EDL89317.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
gi|149034581|gb|EDL89318.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
Length = 172
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
P T++FV LS+ T +SL +AF FG++V+ ++ D+ R RGF F+ +++ E +
Sbjct: 7 AAPGTKVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPESAS 66
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
A++ M+G+ L+GR I V +A R
Sbjct: 67 AAVDAMNGQDLNGRNIRVNLANER 90
>gi|212550891|ref|YP_002309208.1| RNA-binding protein RbpA [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549129|dbj|BAG83797.1| putative RNA-binding protein RbpA [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 98
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+F++GLSFR ++D L+N F+ +G + +++D+ +R +G+ F+ +EE+R+AI +
Sbjct: 3 IFIAGLSFRLNDDDLKNLFESYGTVSSARVIIDRQTSRSKGYGFVEMEDDEEARKAIAEL 62
Query: 140 HGKFLDGRVIFVEIAKSRAELRQAFKNNPR 169
+G D R I V A+ + E R F N+ R
Sbjct: 63 NGSEFDERTISVSEARPK-EKRSGFMNDNR 91
>gi|219881900|gb|ACL52165.1| cold response protein 2 [Metarhizium anisopliae]
Length = 183
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY E +++ AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQENDAQNAIA 61
Query: 138 GMHGKFLDGRVIFVEIAKSRA 158
M+ DGR I V+ A +
Sbjct: 62 AMNNVEFDGRTIRVDKASDNS 82
>gi|124268989|ref|YP_001022993.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
gi|124261764|gb|ABM96758.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
Length = 162
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+L+V L++ +D L+ AF FG + ++MD+ R +GF F+ ++ E++ AIE
Sbjct: 3 NKLYVGNLAYSVRDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAAIE 62
Query: 138 GMHGKFLDGRVIFVEIAKSRAE 159
GM+G+ L GR I V A+ R E
Sbjct: 63 GMNGQSLSGRAIVVNEARPREE 84
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ L F +ED +R F FG + E++L +DKI + +GF F+ + +++ +A
Sbjct: 188 RIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNE 247
Query: 139 MHGKFLDGRVIFVEIAKS 156
M KF+ GR++ V AK+
Sbjct: 248 MDNKFIKGRIVHVTYAKA 265
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNL--VMDKIANRPRGFAFLRYATEEESRRAIE 137
L+V +SF+T ED +R F+ G+++ + L DK + GF F+ YA E++ AI+
Sbjct: 506 LYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDAINAIK 565
Query: 138 GMHGKFLDGRVIFVEIAKSRAE 159
+ GK +DG + +EI++ + +
Sbjct: 566 TLQGKVIDGHAVQIEISQPKVK 587
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L V + F T+ +R F+ +G L V L K+ + +GFAF+ YAT++E+ A+
Sbjct: 605 KLLVKNVPFETNIKEVRELFRTYGTLRGVRLP-KKVDGQNKGFAFVEYATKQEAANAMAA 663
Query: 139 MHGKFLDGRVIFVEIAK 155
+ GR + +E AK
Sbjct: 664 LKNSHFYGRHLIIEYAK 680
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+R+ + L R E L+ F+ FG + + VM R F F+ + E++++ AI
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCK-VMRTPQGNSRKFGFIGFENEDQAQTAIT 60
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M+G ++ + V +AK+
Sbjct: 61 KMNGAYIQSSKLQVSLAKA 79
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ L F +ED +R F FG + E++L +DKI + +GF F+ + +++ +A
Sbjct: 187 RIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNE 246
Query: 139 MHGKFLDGRVIFVEIAKS 156
M KF+ GR++ V AK+
Sbjct: 247 MDNKFIKGRIVHVTYAKA 264
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNL--VMDKIANRPRGFAFLRYATEEESRRAIE 137
L+V +SF+T ED +R F+ G+++ V L DK + GF F+ YA E++ AI+
Sbjct: 518 LYVKNISFKTKEDVIRKVFEKCGRVLAVTLSKTKDKKVEKNSGFGFVEYAKHEDAINAIK 577
Query: 138 GMHGKFLDGRVIFVEIAKSRAE 159
+ GK +DG + +EI++ + +
Sbjct: 578 TLQGKVIDGHAVQIEISQPKVK 599
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L V + F T+ +R F+ +G L V L K+ + +GFAF+ YAT++E+ A+
Sbjct: 617 KLLVKNVPFETNIKEVRELFRTYGTLRGVRLP-KKVDGQNKGFAFVEYATKQEAANAMAA 675
Query: 139 MHGKFLDGRVIFVEIAK 155
+ GR + +E AK
Sbjct: 676 LKNSHFYGRHLIIEYAK 692
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+R+ + L R E L+ F+ FG + + VM R F F+ + E++++ AI
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCK-VMRTPQGNSRKFGFIGFENEDQAQTAIT 60
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M+G ++ + V +AK+
Sbjct: 61 KMNGAYIQSSKLQVSLAKA 79
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ L F +ED +R F FG + E++L +DKI + +GF F+ + +++ +A
Sbjct: 187 RIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNE 246
Query: 139 MHGKFLDGRVIFVEIAKS 156
M KF+ GR++ V AK+
Sbjct: 247 MDNKFIKGRIVHVTYAKA 264
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNL--VMDKIANRPRGFAFLRYATEEESRRAIE 137
L++ LSF+T ED +R F+ G+++ V L DK + GF F+ YA E++ AI+
Sbjct: 518 LYIKNLSFKTKEDVIRKVFEKCGRVLAVTLSKTKDKKVEKNSGFGFVEYARHEDAINAIK 577
Query: 138 GMHGKFLDGRVIFVEIAKSRAE 159
+ GK +DG + +EI++ + +
Sbjct: 578 TLQGKVIDGHAVQIEISQPKVK 599
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L V + F T+ +R F+ +G L V L K+ + +GFAF+ YAT++E+ A+
Sbjct: 617 KLLVKNVPFETNIKEVRELFRTYGTLRGVRLP-KKVDGQNKGFAFVEYATKQEAANAMAA 675
Query: 139 MHGKFLDGRVIFVEIAK 155
+ GR + +E AK
Sbjct: 676 LKNSHFYGRHLIIEYAK 692
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+R+ + L R E L+ F+ FG + + VM R F F+ + E++++ AI
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCK-VMRTPQGVSRKFGFIGFENEDQAQTAIT 60
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M+G ++ + V +AK+
Sbjct: 61 KMNGAYIQSSKLQVSLAKA 79
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R++++ L F +ED +R F FG + E++L +DKI + +GF F+ + +++ +A
Sbjct: 188 RIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNE 247
Query: 139 MHGKFLDGRVIFVEIAKS 156
M KF+ GR++ V AK+
Sbjct: 248 MDNKFIKGRIVHVTYAKA 265
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNL--VMDKIANRPRGFAFLRYATEEESRRAIE 137
L+V +SF+T ED +R F+ G+++ + L DK + GF F+ YA E++ AI+
Sbjct: 506 LYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTKDKKVEKNSGFGFVEYAKHEDAINAIK 565
Query: 138 GMHGKFLDGRVIFVEIAKSRAE 159
+ GK +DG + +EI++ + +
Sbjct: 566 TLQGKVIDGHAVQIEISQPKVK 587
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L V + F T+ +R F+ +G L V L K+ + +GFAF+ YAT++E+ A+
Sbjct: 605 KLLVKNVPFETNIKEVRELFRTYGTLRGVRLP-KKVDGQNKGFAFVEYATKQEAANAMAA 663
Query: 139 MHGKFLDGRVIFVEIAK 155
+ GR + +E AK
Sbjct: 664 LKNSHFYGRHLIIEYAK 680
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+R+ + L R E L+ F+ FG + + VM R F F+ + E++++ AI
Sbjct: 2 SRIIIKNLPERADEKILKQQFEKFGGITDCK-VMRTPQGNSRKFGFIGFENEDQAQTAIT 60
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M+G ++ + V +AK+
Sbjct: 61 KMNGAYIQSSKLQVSLAKA 79
>gi|302759915|ref|XP_002963380.1| hypothetical protein SELMODRAFT_80254 [Selaginella moellendorffii]
gi|300168648|gb|EFJ35251.1| hypothetical protein SELMODRAFT_80254 [Selaginella moellendorffii]
Length = 161
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+C P L+V+GLS R +E L + F G++VE LV+D ++ RGF F+ + +++
Sbjct: 17 SCNPGNNLYVTGLSTRVTEKDLEDYFSKEGKVVECRLVVDPRSHESRGFGFVALESLDDA 76
Query: 133 RRAIEGMHGKFLDGRVIFVEIA-KSRA 158
R I+ +H L+GR+I VE A +SRA
Sbjct: 77 ERCIKRLHHSNLEGRIITVEKARRSRA 103
>gi|47271546|ref|NP_112409.2| cold-inducible RNA-binding protein [Rattus norvegicus]
gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F +G++V++ + D+ RGFAF+RY E+E+++A++ +
Sbjct: 19 LLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 78
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 79 DGRLVDGREIMVQFAK 94
>gi|21361809|ref|NP_062556.2| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|242117971|ref|NP_001156008.1| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|74760797|sp|Q96E39.1|RMXL1_HUMAN RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
gi|15277908|gb|AAH12942.1| Cysteine conjugate-beta lyase 2 [Homo sapiens]
gi|57997143|emb|CAI46148.1| hypothetical protein [Homo sapiens]
gi|119593561|gb|EAW73155.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|119593562|gb|EAW73156.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|208967733|dbj|BAG72512.1| cysteine conjugate-beta lyase 2 [synthetic construct]
Length = 390
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|148699638|gb|EDL31585.1| cold inducible RNA binding protein, isoform CRA_a [Mus musculus]
gi|149034578|gb|EDL89315.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
gi|149034579|gb|EDL89316.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
Length = 168
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E +L F +GQ+ EV +V D+ R RGF F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELR 161
A+ M+GK +DGR I V+ A ++ R
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQAGKSSDNR 89
>gi|307193764|gb|EFN76445.1| U1 small nuclear ribonucleoprotein 70 kDa [Harpegnathos saltator]
Length = 239
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 56/97 (57%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ S T P LFV+ +++ TSE LR F+ +G + ++ ++ + + +PRG
Sbjct: 85 IAVWDPAGISNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTVNGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+AF+ Y E + A + GK +DGR + V++ ++R
Sbjct: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERAR 181
>gi|291225685|ref|XP_002732813.1| PREDICTED: splicing factor, arginine/serine-rich 10-like
[Saccoglossus kowalevskii]
Length = 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 69 HSLSTCQPKTR--LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRY 126
H S P+T L V GLS T+E LR AF +G + +N+V D + R RGFAFL Y
Sbjct: 104 HIGSRANPETNNCLGVFGLSLSTTERELREAFGRYGPIANINVVYDHQSGRSRGFAFLSY 163
Query: 127 ATEEESRRAIEGMHGKFLDGRVIFVEIA 154
+EE++R A + +G +DGR I V+ +
Sbjct: 164 ESEEDAREAKDRTNGMEIDGRRIRVDYS 191
>gi|332809466|ref|XP_003339040.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|332809468|ref|XP_003308251.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|426330271|ref|XP_004026144.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 3
[Gorilla gorilla gorilla]
gi|426330273|ref|XP_004026145.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 4
[Gorilla gorilla gorilla]
Length = 391
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|302769522|ref|XP_002968180.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
gi|300163824|gb|EFJ30434.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
Length = 296
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 54 GRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDK 113
GR LA + S + Q + +L++ GLS+ TS ++L N F +G++ E + DK
Sbjct: 100 GRITVCNLASVGTSGSGGTNDQAQRKLYIGGLSYETSNETLLNIFSKYGEIEEGAVAYDK 159
Query: 114 IANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIA 154
N+ RGFAF+ Y T E +R AI+ + K ++GR + V++A
Sbjct: 160 NTNKSRGFAFVTYKTVEAARNAIDDPN-KTIEGRHVIVKLA 199
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL++ T+ LR AF+ FG++ E +++DK + RGF F+ + + ++RA++
Sbjct: 34 KLFVRGLAWETTSQDLREAFEQFGEIEEGAVIIDKATGKSRGFGFITFKHMDSAQRALK- 92
Query: 139 MHGKFLDGRVIFVEIA 154
K +DGR+ +A
Sbjct: 93 EPSKTIDGRITVCNLA 108
>gi|82802775|gb|ABB92438.1| RBM1 [Pongo pygmaeus]
Length = 385
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|297279100|ref|XP_002801676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 1
[Macaca mulatta]
gi|297279102|ref|XP_002801677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Macaca mulatta]
Length = 391
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|224059524|ref|XP_002299889.1| predicted protein [Populus trichocarpa]
gi|222847147|gb|EEE84694.1| predicted protein [Populus trichocarpa]
Length = 88
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFVS LS T+ L+ F FG + E LV++ RP+GF F+ + +E ++ +A++
Sbjct: 8 QLFVSRLSSYTTNHELKRLFSPFGAVSEARLVVESKTLRPKGFGFVTFESEADAHKALKA 67
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G+ ++GR+IFVE+AK
Sbjct: 68 MNGRIVNGRLIFVEVAK 84
>gi|2827657|emb|CAA16611.1| putative protein [Arabidopsis thaliana]
gi|7268798|emb|CAB79003.1| putative protein [Arabidopsis thaliana]
Length = 115
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 49/71 (69%)
Query: 85 LSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFL 144
L F TSED L+ F FG++ EV L+ D+ R +G+AF+++ +++++ AIE M +
Sbjct: 10 LPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIETMDRRMY 69
Query: 145 DGRVIFVEIAK 155
+GR+I+++IAK
Sbjct: 70 NGRMIYIDIAK 80
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 55/79 (69%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ T++D+LR+AF FGQ+++ ++ D+ R RGF F+ ++T EE+ +I+
Sbjct: 5 KVYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEISIQQ 64
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M+ + LDGR I V +A ++
Sbjct: 65 MNEQPLDGRNIRVNMANAK 83
>gi|82802771|gb|ABB92436.1| RBM1 [Pan troglodytes]
gi|82802773|gb|ABB92437.1| RBM1 [Gorilla gorilla]
Length = 385
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|223938031|ref|ZP_03629929.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223893245|gb|EEF59708.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 114
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L++ LSF +E+ +++ F G + EVNL+MDK+ R RGF F+ +T+E + A++
Sbjct: 3 KLYIGNLSFDATENDVQDLFAQHGPVTEVNLIMDKMTGRARGFGFVTMSTKEGADAAVQN 62
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
++GK GR + V A+ R E
Sbjct: 63 LNGKQWQGRALTVNEARPREE 83
>gi|82802769|gb|ABB92435.1| RBM1 [Homo sapiens]
Length = 384
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|82802777|gb|ABB92439.1| RBM1 [Hylobates lar]
Length = 385
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|148235865|ref|NP_001079794.1| cold-inducible RNA-binding protein B [Xenopus laevis]
gi|82247034|sp|Q9DED4.1|CIRBB_XENLA RecName: Full=Cold-inducible RNA-binding protein B; AltName:
Full=Cold-inducible RNA-binding protein 2; Short=xCIRP2;
AltName: Full=Glycine-rich RNA-binding protein CIRP-B
gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
gi|32450232|gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
Length = 166
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GL+F T+E+SL F +GQ+ EV +V D+ R RGF F+ + ++++ A
Sbjct: 3 DEGKLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ M+GK +DGR I V+ A
Sbjct: 63 MMAMNGKAVDGRQIRVDQA 81
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T ++L AF +G++V+ ++ D+ R RGF F+ +A E+ AIE
Sbjct: 7 RCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDAIEA 66
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G+ LDGR I V A+
Sbjct: 67 MNGQDLDGRNITVNQAQ 83
>gi|82802779|gb|ABB92440.1| RBM1 [Chlorocebus sabaeus]
Length = 385
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|297844820|ref|XP_002890291.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336133|gb|EFH66550.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 158
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GLS T + L+ AF FG++V+ +V+D+ + RGF F+ Y + E++ A++
Sbjct: 36 SKLFVGGLSPATDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEDANNAMQ 95
Query: 138 GMHGKFLDGRVIFVEIAKS 156
MH K LDGR+I V A S
Sbjct: 96 CMHNKELDGRIIGVSPADS 114
>gi|317152544|ref|YP_004120592.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316942795|gb|ADU61846.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LS+ ++ED +R AF+ +G++ VNL+ D+ RPRGF F+ + +R AI
Sbjct: 4 KLYVGNLSWSSTEDDVRAAFEAYGEVTSVNLIEDRETGRPRGFGFVEM-DDAGAREAIAA 62
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
+ GK GR I V AK+R E
Sbjct: 63 LDGKEFGGRNIKVNEAKAREE 83
>gi|297710828|ref|XP_002832064.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Pongo
abelii]
Length = 1051
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 58/89 (65%), Gaps = 5/89 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL+ +T E +L+ F +G++++V L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFVGGLNLKTDEKALKAEFGKYGRIIKVFLMKDRETNKSRGFAFVTFESPADAKAAARD 68
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQAFKNN 167
M+GK LDG+ I V A ++QAFKN+
Sbjct: 69 MNGKCLDGKSIKVAQA-----IKQAFKNS 92
>gi|91078908|ref|XP_967303.1| PREDICTED: similar to AGAP006755-PA isoform 1 [Tribolium castaneum]
gi|270003669|gb|EFA00117.1| hypothetical protein TcasGA2_TC002933 [Tribolium castaneum]
Length = 408
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ T P LFV+ +++ TSE LR F+ +G + ++ L+ + + +PRG
Sbjct: 85 IAVWDPNSAPNITVDPFKTLFVARINYDTSESKLRREFEVYGPIKKIVLIHNSVNGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+AF+ Y E + A + GK +DGR + V++ ++R
Sbjct: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERART 182
>gi|299530322|ref|ZP_07043747.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
gi|298721693|gb|EFI62625.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
Length = 113
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+++V L + ++ +LR+ F FG + ++MD+ R +GFAF+ + +E + AI
Sbjct: 3 TKIYVGNLPYSVTDSNLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAAIS 62
Query: 138 GMHGKFLDGRVIFVEIAKSRAELR 161
+HG +DGR I V +AK R E R
Sbjct: 63 ALHGMSVDGRSIVVNLAKPREEGR 86
>gi|162455777|ref|YP_001618144.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161166359|emb|CAN97664.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 107
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RL+V LS+ TS +SL AF G G++ EV + D+ +PRGFAF+ + +E+ AI
Sbjct: 4 RLYVGNLSYNTSRESLEAAFAGSGEVREVAMPTDRETGQPRGFAFVTMGSAQEANSAISQ 63
Query: 139 MHGKFLDGRVIFVEIAKSR 157
++G LDGR + V A+ R
Sbjct: 64 LNGMMLDGRSLKVNEAQER 82
>gi|158286893|ref|XP_565448.3| AGAP006755-PA [Anopheles gambiae str. PEST]
gi|157020685|gb|EAL41962.3| AGAP006755-PA [Anopheles gambiae str. PEST]
Length = 434
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ +T P LFV+ +++ TSE LR F+ +G + ++ ++ DK +PRG
Sbjct: 85 IATWDPNQLLEATEDPFKTLFVARINYDTSESKLRREFEIYGNIKKIIMINDKDTGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+AF+ Y E + A + GK +DG+ + V++ ++R
Sbjct: 145 YAFIEYEHERDMHAAYKHADGKKIDGKRVLVDVERART 182
>gi|146328793|ref|YP_001209360.1| RNA recognition motif-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146232263|gb|ABQ13241.1| RNA recognition motif protein [Dichelobacter nodosus VCS1703A]
Length = 95
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T ++V LS+RT+ED LRNAF FG + +++ D+ + R +GF F+ E +++AIE
Sbjct: 2 TNIYVGNLSYRTTEDELRNAFSQFGDVQNASIIKDRDSGRSKGFGFVEMPDAEAAKKAIE 61
Query: 138 GMHGKFLDGRVIFVEIAKSRAELR 161
++ K L GR + + A+ R E+R
Sbjct: 62 SLNDKDLGGRNLKINEARPR-EMR 84
>gi|349804063|gb|AEQ17504.1| putative cold-inducible rna-binding protein b [Hymenochirus
curtipes]
Length = 123
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+F T+ED L F +GQ+ EV +V D+ R RGF F+ + ++++ A+
Sbjct: 5 KLFIGGLNFDTNEDGLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMA 64
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK +DGR I V+ A
Sbjct: 65 MNGKAVDGRQIRVDQA 80
>gi|226476662|emb|CAX72223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V L++RT+ D LR F FG++ ++ + D RGFAF+RY T+ E+ AI GM
Sbjct: 17 LKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRGM 76
Query: 140 HGKFLDGRVIFVEIAK 155
G +DGR + V+IAK
Sbjct: 77 DGHKVDGREVRVQIAK 92
>gi|388567211|ref|ZP_10153648.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
gi|388265594|gb|EIK91147.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
Length = 97
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 51/78 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++L+V L + ++DSLR+ F FG + ++ D+ + R +GF F+ A+E E++ AI
Sbjct: 3 SKLYVGNLPYSVNDDSLRHNFSEFGNVASAKVMTDRDSGRSKGFGFVEMASEAEAQAAIN 62
Query: 138 GMHGKFLDGRVIFVEIAK 155
G++G+ +DGR I V +++
Sbjct: 63 GLNGQSVDGRQIVVNVSR 80
>gi|302811189|ref|XP_002987284.1| hypothetical protein SELMODRAFT_37571 [Selaginella moellendorffii]
gi|300144919|gb|EFJ11599.1| hypothetical protein SELMODRAFT_37571 [Selaginella moellendorffii]
Length = 163
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GLS+ T + +L ++F+ FG+++E +++D+ + R RGF F+ +A + AI+
Sbjct: 4 RCFVGGLSWSTDDQALESSFRQFGRILEAKVIIDRGSGRSRGFGFVTFADQRAMDEAIDR 63
Query: 139 MHGKFLDGRVIFVEIA 154
+H K LDGRV+ V A
Sbjct: 64 LHNKELDGRVVTVNKA 79
>gi|115453241|ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|108708430|gb|ABF96225.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548692|dbj|BAF12135.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|125586437|gb|EAZ27101.1| hypothetical protein OsJ_11032 [Oryza sativa Japonica Group]
gi|215697052|dbj|BAG91046.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766568|dbj|BAG98727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 65 PPSPHSLSTCQP----KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
PP P S+ + R++V LS+ +L N F G G+++E ++ D+ + R RG
Sbjct: 163 PPPPREQSSQRAPRGEANRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRG 222
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQ 162
F F+ Y + EE A+ + G +DGR I V +A+S+ RQ
Sbjct: 223 FGFVTYGSAEEVENAVSNLDGADMDGRQIRVTVAESKPPRRQ 264
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+FV L F L F+ G + V ++ DK+ R RGF F+ ++ EE A+E
Sbjct: 87 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQ 146
Query: 139 MHGKFLDGRVIFV 151
+G LDGR + V
Sbjct: 147 FNGYILDGRSLRV 159
>gi|290990125|ref|XP_002677687.1| predicted protein [Naegleria gruberi]
gi|284091296|gb|EFC44943.1| predicted protein [Naegleria gruberi]
Length = 202
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
L P+ + +T +P LF+S +++ T+ED+LRNAF FG + V +V D N+ RG
Sbjct: 91 LQDWDPNNDTKATTEPFNTLFISKMNYETTEDTLRNAFGKFGPIKTVRVVRDASTNKSRG 150
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+AF+ + E+ + A + G +D + V++ + R
Sbjct: 151 YAFVEFEKHEDMKEAYKLGDGMEIDQWRVLVDVERGRT 188
>gi|343958808|dbj|BAK63259.1| cold-inducible RNA-binding protein [Pan troglodytes]
Length = 225
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLSF T+E SL F +GQ+ EV +V D+ R RG F+ + ++++ A+
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGSGFVTFENIDDAKDAMMA 66
Query: 139 MHGKFLDGRVIFVEIAKSRAELR 161
M+GK +DGR I V+ A ++ R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>gi|148231554|ref|NP_001080069.1| cold-inducible RNA-binding protein A [Xenopus laevis]
gi|284018072|sp|O93235.2|CIRBA_XENLA RecName: Full=Cold-inducible RNA-binding protein A; AltName:
Full=Cold-inducible RNA-binding protein; Short=XCIRP;
AltName: Full=Cold-inducible RNA-binding protein 1;
Short=XCIRP-1; AltName: Full=Glycine-rich RNA-binding
protein CIRP-A
gi|27735413|gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis]
Length = 166
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GL+F T+ED L AF +G++ EV +V D+ R RGF F+ + ++++ A
Sbjct: 3 DEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ M+GK +DGR I V+ A
Sbjct: 63 MMAMNGKSVDGRQIRVDQA 81
>gi|156547263|ref|XP_001602052.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Nasonia
vitripennis]
Length = 402
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ T P LFV+ +++ TSE LR F+ +G + ++ ++ + I +PRG
Sbjct: 85 IAVWDPASIPNVTVDPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNSINGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+AF+ Y E + A + GK +DGR + V++ ++R
Sbjct: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERAR 181
>gi|302815033|ref|XP_002989199.1| hypothetical protein SELMODRAFT_37572 [Selaginella moellendorffii]
gi|300143099|gb|EFJ09793.1| hypothetical protein SELMODRAFT_37572 [Selaginella moellendorffii]
Length = 166
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GLS+ T + +L ++F+ FG+++E +++D+ + R RGF F+ +A + AI+
Sbjct: 4 RCFVGGLSWSTDDQALESSFRQFGRILEAKVIIDRGSGRSRGFGFVTFADQRAMDEAIDR 63
Query: 139 MHGKFLDGRVIFVEIA 154
+H K LDGRV+ V A
Sbjct: 64 LHNKELDGRVVTVNKA 79
>gi|335423511|ref|ZP_08552532.1| RNP-1 like RNA-binding protein [Salinisphaera shabanensis E1L3A]
gi|334891336|gb|EGM29584.1| RNP-1 like RNA-binding protein [Salinisphaera shabanensis E1L3A]
Length = 90
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS+ T++D LR AF+ FG++ ++MD+ R RGF F+ + ++++AIEGM
Sbjct: 3 IYVGNLSWNTNDDELRGAFEAFGEVSSAKVIMDRETGRSRGFGFVEMPDDNDAKQAIEGM 62
Query: 140 HGKFLDGRVIFVEIA 154
+ K L GR + V A
Sbjct: 63 NNKDLGGRTLRVNEA 77
>gi|30681492|ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|330252116|gb|AEC07210.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 159
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +++ ++ D+ R RGF F+ + E+
Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
+ AIEGM+G+ LDGR I V A+
Sbjct: 61 AMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|21553354|gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +++ ++ D+ R RGF F+ + E+
Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
+ AIEGM+G+ LDGR I V A+
Sbjct: 61 AMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|227204227|dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana]
Length = 153
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +++ ++ D+ R RGF F+ + E+
Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
+ AIEGM+G+ LDGR I V A+
Sbjct: 61 AMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|15226605|ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|544424|sp|Q03250.1|GRP7_ARATH RecName: Full=Glycine-rich RNA-binding protein 7
gi|16226372|gb|AAL16149.1|AF428381_1 At2g22292/F2G1.7_ [Arabidopsis thaliana]
gi|16301|emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gi|166837|gb|AAA32853.1| RNA-binding protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gi|15810032|gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
gi|330252115|gb|AEC07209.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 176
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +++ ++ D+ R RGF F+ + E+
Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAK 155
+ AIEGM+G+ LDGR I V A+
Sbjct: 61 AMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|260221864|emb|CBA30852.1| Putative RNA-binding protein rbpB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 124
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 54/82 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++++V L + ++DSL++ F FG++ ++MD+ R +GFAF+ +T ++ AI+
Sbjct: 29 SKIYVGNLPYSVTDDSLQSNFSEFGEVTSAKVMMDRDTGRSKGFAFVEMSTPAFAQAAID 88
Query: 138 GMHGKFLDGRVIFVEIAKSRAE 159
G++G+ +DGR I V +A+ R +
Sbjct: 89 GLNGQSVDGRSIVVNLARPRED 110
>gi|357122080|ref|XP_003562744.1| PREDICTED: uncharacterized protein LOC100841917 [Brachypodium
distachyon]
Length = 324
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LFV GLS+ T + +L++AF +G + E +++D+ R +GF F+ Y + E +
Sbjct: 28 CMSSSKLFVGGLSYATDDPTLKDAFSHYGDVCEARVIIDRDTGRSKGFGFITYTSSEAAA 87
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRA 158
AI M GK L GR++ V A RA
Sbjct: 88 AAISAMDGKDLQGRMVKVAYATDRA 112
>gi|259155082|ref|NP_001158783.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
gi|223647384|gb|ACN10450.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
Length = 290
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLDTETNEKALEKHFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKPIKVEQA 84
>gi|1346180|sp|P49310.1|GRP1_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP1A
gi|496233|gb|AAA59212.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 166
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T + +L AF +G++++ ++ D+ R RGF F+ + E+ + AIEG
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G+ LDGR I V A+
Sbjct: 69 MNGQDLDGRSITVNEAQ 85
>gi|257043450|gb|ACV33079.1| glycine-rich RNA-binding protein [Limonium bicolor]
Length = 140
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 56 GACFPLACLPPSPHSLST------CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNL 109
G + P S+++ C ++LF+ GLS+ T + SL++AF FG + E +
Sbjct: 7 GNLLKQKAVTAGPMSMTSMMNSIRCMSSSKLFIGGLSWGTDDQSLKDAFASFGDVTEARV 66
Query: 110 VMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+MD+ + RGF F+ Y E + A+ M G+ L+GR I V A R
Sbjct: 67 IMDRNTGKSRGFGFVEYNDTESASSAMSSMDGQELNGRNIRVSYATER 114
>gi|387018118|gb|AFJ51177.1| Heterogeneous nuclear ribonucleoprotein G-like [Crotalus
adamanteus]
Length = 384
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKSIKVEQA 84
>gi|332017705|gb|EGI58383.1| U1 small nuclear ribonucleoprotein 70 kDa [Acromyrmex echinatior]
Length = 405
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ S T P LFV+ +++ TSE LR F+ +G + ++ + + I +PRG
Sbjct: 85 IAVWDPAGISNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVTHNTINGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+AF+ Y E + A + GK +DGR + V++ ++R
Sbjct: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERART 182
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F +G++V++ + D+ RGFAF+RY E+E+++A++ +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR + V+ AK
Sbjct: 78 DGRLVDGREMMVQFAK 93
>gi|7439974|pir||JC6571 cold-inducible RNA-binding protein homolog - clawed frog
gi|3341887|dbj|BAA31861.1| cold-inducible RNA binding protein [Xenopus laevis]
Length = 163
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LF+ GL+F T+ED L AF +G++ EV +V D+ R RGF F+ + ++++ A
Sbjct: 3 DEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIA 154
+ M+GK +DGR I V+ A
Sbjct: 63 MMAMNGKSVDGRQIRVDQA 81
>gi|410898649|ref|XP_003962810.1| PREDICTED: transformer-2 protein homolog beta-like [Takifugu
rubripes]
Length = 277
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P L V GLS T+E LR F +G L +VN+V D+ + R RGFAF+ + T E+S+
Sbjct: 111 DPNNCLGVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFETSEDSKE 170
Query: 135 AIEGMHGKFLDGRVIFVEIA 154
A E +G LDGR I V+ +
Sbjct: 171 AKEHANGMELDGRRIRVDFS 190
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
Length = 174
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 53/80 (66%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+++V LS+ T++D+LR AF FGQ+++ ++ D+ R RGF F+ +++ E+ AI
Sbjct: 3 TKVYVGNLSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESAIS 62
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
++ + LDGR I V +A +R
Sbjct: 63 SLNEQELDGRRIKVNLANAR 82
>gi|342889186|gb|EGU88353.1| hypothetical protein FOXB_01152 [Fusarium oxysporum Fo5176]
Length = 170
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY E ++++AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQKAIA 61
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M+ DGR I V+ A
Sbjct: 62 TMNNVEFDGRTIRVDKASD 80
>gi|388512303|gb|AFK44213.1| unknown [Medicago truncatula]
Length = 121
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
++LF+ GLS+ + SLR+AF +G +VE ++ D+ R RGF F+ + +EE + A
Sbjct: 9 SSSKLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFINFTSEESATSA 68
Query: 136 IEGMHGKFLDGRVIFVEIAKSR 157
+ M G+ L+GR I V A R
Sbjct: 69 LS-MDGQDLNGRNIRVSYANDR 89
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 53/79 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ T++DSLR AF FGQ+++ ++ D+ R RGF F+ +++ E++ AI
Sbjct: 4 KVYVGNLSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTAITS 63
Query: 139 MHGKFLDGRVIFVEIAKSR 157
++ + LDGR I V +A +R
Sbjct: 64 LNEQELDGRRIRVNLANAR 82
>gi|119608862|gb|EAW88456.1| RNA binding motif protein, X-linked, isoform CRA_b [Homo sapiens]
Length = 221
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|431891348|gb|ELK02224.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 278
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|452002034|gb|EMD94493.1| hypothetical protein COCHEDRAFT_1131167 [Cochliobolus
heterostrophus C5]
Length = 125
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T + +LR+ F+ FG + E +V D+ R RGF F+RYA E E+ A++
Sbjct: 3 KLFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQA 62
Query: 139 MHGKFLDGRVIFVEIA 154
M+ + DGR I V+ A
Sbjct: 63 MNNEEFDGRRIRVDKA 78
>gi|426372865|ref|XP_004053334.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 306
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 2 AVLGFLPVPTTYFNINQNLLIHNLTRHSPAPATPFTIKRRD------FDSLFSLRQGRGR 55
+G LP P +F +Q + ++PA +PF + F SL +GR R
Sbjct: 57 GAVGSLPGPARHFTCSQRQV---ELLNAPAQNSPFCYTEGEGRLADTFVSLLLSARGRRR 113
Query: 56 GACFPLACLPPS-PHSLSTCQPKT--RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMD 112
+ ++ P S S +P+ +LF+ GLSF T+++SLR+ F+ +G L + ++ D
Sbjct: 114 RSIVKVSLHPAVMSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 173
Query: 113 KIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAE 159
R RGF F+ YAT EE A+ K +DGRV+ + A SR +
Sbjct: 174 PNTKRSRGFGFVTYATVEEVDAAMNARPHK-VDGRVVEPKRAVSRED 219
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 31/48 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRY 126
++FV G+ T E LR+ F+ +G++ + ++ D+ + + RGFAF+ +
Sbjct: 231 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTF 278
>gi|384099683|ref|ZP_10000766.1| RNP-1 like RNA-binding protein [Imtechella halotolerans K1]
gi|383832219|gb|EID71694.1| RNP-1 like RNA-binding protein [Imtechella halotolerans K1]
Length = 92
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV LSF+TSE+ L + F FG++ V +++D +NR RGFAF+ E + AIE +
Sbjct: 3 IFVGNLSFQTSEEQLLDVFTPFGEVSSVKVIVDGYSNRSRGFAFVEMPVSEHALTAIERL 62
Query: 140 HGKFLDGRVIFVEIAK 155
+ LD RVI V AK
Sbjct: 63 NESMLDSRVIVVNEAK 78
>gi|339240627|ref|XP_003376239.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316975057|gb|EFV58516.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 294
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A PS + ++ P LFV+ LS+ T+E LR F+ +G + ++ ++ D I + RG
Sbjct: 85 IATWNPSANDKASTDPFKTLFVARLSYDTTETKLRREFEVYGPIKKIYMITDIITGKSRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+AF+ Y E + A + GK +D R + V++ + R
Sbjct: 145 YAFIEYEHEADMHAAYKHADGKKIDKRRVLVDVERGRT 182
>gi|398337153|ref|ZP_10521858.1| RNA-binding protein [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
gi|398339344|ref|ZP_10524047.1| RNA-binding protein [Leptospira kirschneri serovar Bim str. 1051]
gi|418679408|ref|ZP_13240671.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686673|ref|ZP_13247838.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418742090|ref|ZP_13298463.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421090342|ref|ZP_15551136.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|421107449|ref|ZP_15568001.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|421132619|ref|ZP_15592785.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|400320299|gb|EJO68170.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410000920|gb|EKO51546.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|410007465|gb|EKO61175.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|410356002|gb|EKP03377.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|410738744|gb|EKQ83477.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750448|gb|EKR07428.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 91
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 49/75 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++ L+++ +ED LR AF+ FG++ V ++ DK++ + RG AF+ A ++E AI+G+
Sbjct: 3 IYIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKDEGNAAIDGL 62
Query: 140 HGKFLDGRVIFVEIA 154
+G + GR I V A
Sbjct: 63 NGTQIRGREIKVNEA 77
>gi|357635466|ref|ZP_09133344.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
gi|386393370|ref|ZP_10078151.1| RRM domain-containing RNA-binding protein [Desulfovibrio sp. U5L]
gi|357584020|gb|EHJ49353.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
gi|385734248|gb|EIG54446.1| RRM domain-containing RNA-binding protein [Desulfovibrio sp. U5L]
Length = 98
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LSF ++ED +R F FG+++ VNL+ D+ R RGF F+ EE +R AI+G
Sbjct: 4 KLYVGNLSFNSTEDDIRTQFATFGEVISVNLITDRETGRLRGFGFVEM-DEEGARAAIQG 62
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M GK GR + V A+ +
Sbjct: 63 MDGKDFGGRNLKVNEAEDK 81
>gi|72387121|ref|XP_843985.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175981|gb|AAX70104.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70800517|gb|AAZ10426.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 386
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 60 PLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPR 119
P LP S + + CQ KT L V LS R E L+ F +G+++ ++ +
Sbjct: 29 PFVKLPESKLTPNECQSKTNLIVRNLSNRVDEAVLKQIFSPYGEILSAAVMRNIHTGDSL 88
Query: 120 GFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAK 155
G AF+R+AT E++R A+ G HG+ + GRV+ V+ AK
Sbjct: 89 GTAFVRFATTEQARAALVGCHGRVVCGRVLSVQWAK 124
>gi|302808477|ref|XP_002985933.1| hypothetical protein SELMODRAFT_424875 [Selaginella moellendorffii]
gi|300146440|gb|EFJ13110.1| hypothetical protein SELMODRAFT_424875 [Selaginella moellendorffii]
Length = 229
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +RL VS LS +E L+ F +G ++ V+L MDK N P+GFA++ Y ++ ++
Sbjct: 55 AEDSSRLHVSQLSRNVNESHLKEIFGNYGDIIAVDLAMDKTVNLPKGFAYVDYKSKSDAE 114
Query: 134 RAIEGMHGKFLDGRVIFVEIAK 155
+A + M G +DG VI V++ +
Sbjct: 115 KAQQFMDGAQVDGLVISVKLTR 136
>gi|118792383|ref|XP_320292.3| AGAP012250-PA [Anopheles gambiae str. PEST]
gi|116116874|gb|EAA00555.3| AGAP012250-PA [Anopheles gambiae str. PEST]
Length = 209
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 68 PHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYA 127
P+ P +F+ L+ +E+ LR F FG +V LV D + PRG+AF+ Y+
Sbjct: 51 PNRKVKGNPLHTIFIGRLAHSVTEEQLRAKFAPFGTIVHARLVTDIVTGLPRGYAFIEYS 110
Query: 128 TEEESRRAIEGMHGKFLDGRVIFVE 152
E+ RAIE MHG +DG+ I V+
Sbjct: 111 ARGEALRAIERMHGVTIDGKEILVD 135
>gi|340721943|ref|XP_003399372.1| PREDICTED: probable RNA-binding protein 19-like [Bombus terrestris]
Length = 901
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 51/81 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+F+ LS+ +ED++R F+ +G L EVNL +D+ +P+GF + + E + +A
Sbjct: 360 RMFIRNLSYTITEDNIRQLFEKYGPLSEVNLPIDRTTRKPKGFGTVAFLMPEHAVKAYSE 419
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
+ G LDGR++ V AK++++
Sbjct: 420 LDGSILDGRMLHVLPAKAKSD 440
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIA-NRPRGFAFLRYATEEE 131
T Q T++ + + F+ + + + F+ FG+L V L + + RGFAF+ Y T+ E
Sbjct: 775 TAQTGTKILIRNVPFQATVEEVTELFKAFGELKAVRLPKKLVGVEKHRGFAFVEYYTKSE 834
Query: 132 SRRAIEGM-HGKFLDGRVIFVEIAKSRAELRQAFKNNPRQ 170
+++A + + L GR + +E A++ + + K +
Sbjct: 835 AKKAFKALCQSTHLYGRRLVLEWAQTEEGVEEVRKRTAKH 874
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP-----RGFAFLRYATEEES 132
T LFV ++F T+E+ L+ F G L V++ K P G+ F+RY + ++
Sbjct: 676 TTLFVKNINFTTTEEQLKTYFGKCGALHYVSIATKKDPKNPGAKLSMGYGFVRYKRKVDA 735
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKN 166
RA++ + L+G+ + E+ +S L K+
Sbjct: 736 DRALKVLQMTVLEGKTL--ELKRSERTLTTDLKS 767
>gi|225435044|ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|297746123|emb|CBI16179.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 52/79 (65%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+ +FV+ LS T+ + L F FG + + L+ D RP+GF F+++ +E ++ +A++
Sbjct: 25 SEIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPKTQRPKGFGFVKFESEVDAEKALK 84
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M+G+ + GR+IFVEIAK+
Sbjct: 85 AMNGRIVRGRLIFVEIAKT 103
>gi|385305287|gb|EIF49275.1| nuclear localization sequence binding protein [Dekkera bruxellensis
AWRI1499]
Length = 358
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 53/84 (63%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+P LFV LSF + D +R AF+ FG + + + PRGFA++++++ EE++
Sbjct: 211 SEPSDTLFVGNLSFEATMDDVRGAFESFGSIEXIRIPTRPGTEDPRGFAYVQFSSVEEAK 270
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSR 157
A++GM+G++++GR + ++ + R
Sbjct: 271 AALDGMNGEYINGRSVRLDYSTPR 294
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 72 STCQPKTRLFVSGLSFRTSEDSLRNAF--QGFGQLVEVNLVMDKIANRPRGFAFLRYATE 129
S +P T +FV LS+ +D L+ F + + ++ + + R +GF ++ + +
Sbjct: 103 SAEEPGT-MFVGRLSWNVDDDGLKQFFVDENVPGVXSARVITENGSGRSKGFGYVDFDSV 161
Query: 130 EESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+ A++ G +DGR + +++A S+
Sbjct: 162 AHAEAAVKKYDGAEIDGRAVHLDMAASK 189
>gi|375144998|ref|YP_005007439.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361059044|gb|AEV98035.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 82
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++VS LSF D LR F +G++ VN+++DK+ NR RGFAF+ + + +AI +
Sbjct: 3 IYVSNLSFSVQNDDLRKHFSEYGEVDSVNVIIDKVTNRSRGFAFIEMKDNQAAEKAIREL 62
Query: 140 HGKFLDGRVIFVEIAKSR 157
+G +D R I V A+ +
Sbjct: 63 NGLTIDNRAIKVNEAREK 80
>gi|164659141|ref|XP_001730695.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
gi|159104592|gb|EDP43481.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
Length = 190
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ T++D L AF +GQL + ++ D+ + R RGF F+ + T++E+ AI
Sbjct: 3 KVYVGNLSWSTTDDGLAQAFSPYGQLTDYIVMKDRDSGRSRGFGFVTFMTQQEADAAIMA 62
Query: 139 MHGKFLDGRVIFVEIAKSRAEL 160
++ + LDGR I V +A SR +
Sbjct: 63 LNEQELDGRRIRVNMANSRPPM 84
>gi|423196273|ref|ZP_17182856.1| hypothetical protein HMPREF1171_00888 [Aeromonas hydrophila SSU]
gi|404632497|gb|EKB29102.1| hypothetical protein HMPREF1171_00888 [Aeromonas hydrophila SSU]
Length = 92
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+R + D L+ F FGQ+ +V++++D+ + +GF F+ E+ +AI G
Sbjct: 2 KIYVGNLSYRMTADELKTVFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGEAEKAIAG 61
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
+HG + GR I V AK + +
Sbjct: 62 LHGTEIGGRTITVNQAKPKTD 82
>gi|325972386|ref|YP_004248577.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
gi|324027624|gb|ADY14383.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
Length = 95
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V +S++T+E++L + F +G ++ ++MD+ NRP+GFAF+ + + AI
Sbjct: 4 KIYVGNMSYQTTEEALYSLFAQYGDVMSARIIMDRDTNRPKGFAFVEMDDDSAAVAAISQ 63
Query: 139 MHGKFLDGRVIFVE--IAKSRAELRQAFKN 166
+ G+ LDGR + V IAK R E R ++ N
Sbjct: 64 LDGRELDGRNLRVNEAIAKERTERRPSYNN 93
>gi|125544079|gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 65 PPSPHSLSTCQP----KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
PP P S+ + R++V LS+ +L N F G G+++E ++ D+ + R RG
Sbjct: 163 PPPPREQSSRRAPRGEANRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRG 222
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQ 162
F F+ Y + EE A+ + G +DGR I V +A+S+ RQ
Sbjct: 223 FGFVTYGSAEEVENAVSNLDGADMDGRQIRVTVAESKPPRRQ 264
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+FV L F L F+ G + V ++ DK+ R RGF F+ ++ EE A+E
Sbjct: 87 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQ 146
Query: 139 MHGKFLDGRVIFV 151
+G LDGR + V
Sbjct: 147 FNGYILDGRSLRV 159
>gi|229485954|sp|P0C8Z4.1|RMXL3_PANTR RecName: Full=RNA-binding motif protein, X-linked-like-3
Length = 992
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 49/73 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL+ +T E +L+ F +G +++V L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFVGGLNLKTDEKALKAEFGKYGHIIKVFLIKDRKTNKSRGFAFVTFESPADAKAAARD 68
Query: 139 MHGKFLDGRVIFV 151
M+GK+LDG+ I V
Sbjct: 69 MNGKYLDGKAIMV 81
>gi|182412766|ref|YP_001817832.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
gi|177839980|gb|ACB74232.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
Length = 117
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++L+V LSF+T+E+ LR+AF FG + +V + MDK+ RPRGFAF+ T EE++ A E
Sbjct: 4 SKLYVGNLSFKTTEEELRSAFGQFGSVTDVYVAMDKMTGRPRGFAFVTMGTAEEAKAAAE 63
Query: 138 GMHGKFLDGRVIFVEIAKSRAE 159
++G L GR + V A+ + E
Sbjct: 64 KLNGTDLGGRQLTVNEARPKEE 85
>gi|449468384|ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
gi|449522522|ref|XP_004168275.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 145
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV+GLS+ E SL++AF FG++ EV +V DK + R RGF F+ +A +++ A +
Sbjct: 45 KLFVAGLSWSMDERSLKDAFSSFGEVTEVRIVYDKDSGRSRGFGFVNFANGNDAQCAKDA 104
Query: 139 MHGKFLDGRVIFVEIA--KSRAE 159
M GK + GR + + A K R E
Sbjct: 105 MDGKAVLGRPLRISFALDKVRGE 127
>gi|268573870|ref|XP_002641912.1| C. briggsae CBR-RNP-7 protein [Caenorhabditis briggsae]
Length = 312
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 7/121 (5%)
Query: 39 KRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAF 98
KRR + L + + +G +A P+ +S +T P LFV +++ TSE LR F
Sbjct: 71 KRRQKEELLAYKVEQG------IATWNPAENSRATEDPYRTLFVGRINYETSESKLRREF 124
Query: 99 QGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+ +G++ ++ +V D+ + +PRG+AF+ Y+ + E A + G +DG+ + V+ + R
Sbjct: 125 EAYGKIKKLTMVHDE-SGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYERGRT 183
Query: 159 E 159
+
Sbjct: 184 Q 184
>gi|308501349|ref|XP_003112859.1| CRE-RNP-7 protein [Caenorhabditis remanei]
gi|308265160|gb|EFP09113.1| CRE-RNP-7 protein [Caenorhabditis remanei]
Length = 326
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 39 KRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAF 98
KRR D L + + +G +A P+ + ++ P LFV +++ TSE LR F
Sbjct: 71 KRRQKDELLAYKVEQG------IATWNPAENPRASEDPYRTLFVGRINYETSESKLRREF 124
Query: 99 QGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+ +G++ ++ +V D+ A +PRG+AF+ Y+ + E A + G +DG+ + V+ + R
Sbjct: 125 EAYGKIKKLTMVHDE-AGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYERGRT 183
Query: 159 E 159
+
Sbjct: 184 Q 184
>gi|123415396|ref|XP_001304682.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121886151|gb|EAX91752.1| hypothetical protein TVAG_147530 [Trichomonas vaginalis G3]
Length = 141
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q T++ V GLS++T+ + + AF FG LVE L++++ N RGFAFL Y T++E++
Sbjct: 8 QGSTKISVFGLSYKTNVNDIYKAFSKFGTLVECKLILNE-NNESRGFAFLSYKTQKEAQY 66
Query: 135 AIEGMHGKFLDGRVIFVEIAKSRAELR 161
AI+ +GK DG ++ ++ ++ + +++
Sbjct: 67 AIDCTNGKRFDGGMLKIQWSRPKDQVQ 93
>gi|351715732|gb|EHB18651.1| Heterogeneous nuclear ribonucleoprotein G [Heterocephalus glaber]
Length = 356
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|307180956|gb|EFN68744.1| Probable RNA-binding protein 19 [Camponotus floridanus]
Length = 903
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 50/82 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+F+ L++ +ED +R F+ +G L EVNL +D++ +P+GF + + E + +A
Sbjct: 363 RMFIRNLTYTITEDDIRKLFEKYGPLSEVNLPVDRVTRKPKGFGTVTFLMPEHALKAYSE 422
Query: 139 MHGKFLDGRVIFVEIAKSRAEL 160
+ G LDGR++ + AK +A L
Sbjct: 423 LDGTVLDGRMLHILPAKMKASL 444
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPR-----GFAFLRYATE 129
+P T LFV ++F T+E+ L++ F G L + + K P G+ F+RY +
Sbjct: 673 EPDTTLFVKNINFSTTEEQLKDYFGKCGPLHYITIATKKDPENPTNKLSMGYGFVRYKRK 732
Query: 130 EESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQAFK 165
++ RA++ + LDG+ + E+ +S L K
Sbjct: 733 HDADRALKTLQMSVLDGKSL--ELKRSERTLMSDVK 766
Score = 35.4 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+RL V L ++ L+ F G + +V L K + R FAF+ Y TEE+++ A
Sbjct: 2 SRLIVKNLPKSVTDTKLKELFSEKGIVTDVQLKYTK-DGKFRRFAFIGYKTEEQAKLAES 60
Query: 138 GMHGKFLDGRVIFVE 152
++D IFVE
Sbjct: 61 FFDQTYIDTCKIFVE 75
>gi|88813641|ref|ZP_01128871.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88789097|gb|EAR20234.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 96
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V L F SED +R+ F +G++ EV L+ D+ RPRGF F+R A ++ AIE +
Sbjct: 5 IYVGNLPFTASEDEIRDLFAQYGEVNEVRLITDRDTGRPRGFGFVRMAP-ADADAAIEAL 63
Query: 140 HGKFLDGRVIFVEIAKSRAELR 161
+G LDGR + + A+ R E R
Sbjct: 64 NGTELDGRALRINEAQERQERR 85
>gi|291225111|ref|XP_002732544.1| PREDICTED: RNA binding motif protein, Y-linked, family 1, member
A1-like [Saccoglossus kowalevskii]
Length = 479
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+++++GLS T E +L FGQ+ +V L+ DK R RGFAF+ Y T ++ A+
Sbjct: 12 TKVYLAGLSADTDETALELEMSKFGQVADVLLIKDKTTGRSRGFAFVTYETSSDAALAVT 71
Query: 138 GMHGKFLDGRVIFVEIAK 155
G++GK G+VI V+ AK
Sbjct: 72 GLNGKEFMGKVIKVDHAK 89
>gi|542850|pir||S41766 heterogeneous nuclear ribonucleoprotein G - human
Length = 437
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
gi|297333373|gb|EFH63791.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C +++FV G+S+ T E LR AF +G++V+ +++D+ R RGFAF+ + + EE+
Sbjct: 30 CMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEAS 89
Query: 134 RAIEGMHGKFLDGRVIFVEIA 154
A++ + G+ L GR I V A
Sbjct: 90 NAMQ-LDGQDLHGRRIRVNYA 109
>gi|432877559|ref|XP_004073159.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Oryzias latipes]
Length = 386
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQAFKNNPRQN 171
M+GK LDG+ I VE A ++ + A + P N
Sbjct: 69 MNGKSLDGKPIKVEQA-TKPQFESAGRRGPPSN 100
>gi|395860828|ref|XP_003802706.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Otolemur
garnettii]
Length = 391
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|390480268|ref|XP_002763353.2| PREDICTED: RNA-binding motif protein, X chromosome-like [Callithrix
jacchus]
Length = 156
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|348515473|ref|XP_003445264.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Oreochromis niloticus]
Length = 391
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKPIKVEQA 84
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
gi|12324900|gb|AAG52402.1|AC020579_4 putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gi|25083154|gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|30023780|gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gi|332197447|gb|AEE35568.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
Length = 289
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C +++FV G+S+ T E LR AF +G++V+ +++D+ R RGFAF+ + + EE+
Sbjct: 30 CMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEAS 89
Query: 134 RAIEGMHGKFLDGRVIFVEIA 154
A++ + G+ L GR I V A
Sbjct: 90 NAMQ-LDGQDLHGRRIRVNYA 109
>gi|344247055|gb|EGW03159.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 384
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|339501141|ref|YP_004699176.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
gi|338835490|gb|AEJ20668.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
Length = 116
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LS+ TSEDSLRN F FG + ++ D+ +GF F+ +T+EE+ AI G
Sbjct: 25 KLYVGNLSYNTSEDSLRNLFSNFGSVASAKIIFDRETGNSKGFGFVEMSTDEEASAAIAG 84
Query: 139 MHGKFLDGRVIFVEIAKSR 157
+G+ +GR + V A +
Sbjct: 85 TNGREFEGRQLRVNEAMDK 103
>gi|291514454|emb|CBK63664.1| RNA-binding proteins (RRM domain) [Alistipes shahii WAL 8301]
Length = 116
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++VS LS+ TS + L N F FG++ N++ D+ R RGF F+ EEE ++AI+ +
Sbjct: 3 IYVSHLSWGTSSEGLGNLFMQFGEVASANVITDRETGRSRGFGFVEMPNEEEGQKAIDQL 62
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
+G +G+ I V +A+ R E
Sbjct: 63 NGTSFEGQTITVNVARPREE 82
>gi|357131533|ref|XP_003567391.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 141
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV+GLS+ E SL +AF FG + EV ++ DK + R RGF F++++ + E++ A +
Sbjct: 48 KLFVAGLSWSADERSLMDAFSSFGTVTEVRIMYDKNSGRSRGFGFVQFSNDYEAKCAKDA 107
Query: 139 MHGKFLDGRVIFVEIA 154
M GK + GR + + A
Sbjct: 108 MDGKVMLGRSLKISYA 123
>gi|355757746|gb|EHH61271.1| hypothetical protein EGM_19240 [Macaca fascicularis]
Length = 391
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|432877561|ref|XP_004073160.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Oryzias latipes]
Length = 380
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQAFKNNPRQN 171
M+GK LDG+ I VE A ++ + A + P N
Sbjct: 69 MNGKSLDGKPIKVEQA-TKPQFESAGRRGPPSN 100
>gi|357144334|ref|XP_003573255.1| PREDICTED: uncharacterized protein LOC100824407 [Brachypodium
distachyon]
Length = 226
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV LS+ T++ L++AF FG++ E +V+DK + R RGF F+ + ++ A+E
Sbjct: 8 RCFVGSLSWSTTDVDLKDAFGKFGRVTETKVVLDKYSGRSRGFGFVTFDDKKAMEEAVEA 67
Query: 139 MHGKFLDGRVIFVEIAK 155
M+G LDGR I VE A+
Sbjct: 68 MNGIDLDGRNITVERAQ 84
>gi|426257491|ref|XP_004022360.1| PREDICTED: RNA-binding motif protein, X chromosome [Ovis aries]
Length = 391
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|327286671|ref|XP_003228053.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 1
[Anolis carolinensis]
Length = 384
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|261327112|emb|CBH10088.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 426
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 60 PLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPR 119
P LP S + + CQ KT L V LS R E L+ F +G+++ ++ +
Sbjct: 69 PFVKLPESKLTPNECQSKTNLIVRNLSNRVDEAVLKQIFSPYGEILSAAVMRNIHTGDSL 128
Query: 120 GFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAK 155
G AF+R+AT E++R A+ G HG+ + GRV+ V+ AK
Sbjct: 129 GTAFVRFATTEQARAALVGCHGRVVCGRVLSVQWAK 164
>gi|361128698|gb|EHL00628.1| putative Cold-inducible RNA-binding protein [Glarea lozoyensis
74030]
Length = 170
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E++LR F+ FG + E +V D+ R RGF F+RY E ++ AI
Sbjct: 2 SKLFIGGLAWHTDENALRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQESDAEAAIT 61
Query: 138 GMHGKFLDGRVIFVEIA 154
M+ DGR I V+ A
Sbjct: 62 AMNNIEFDGRTIRVDKA 78
>gi|115470953|ref|NP_001059075.1| Os07g0187300 [Oryza sativa Japonica Group]
gi|33146923|dbj|BAC79944.1| glycine-rich RNA-binding protein-like [Oryza sativa Japonica Group]
gi|50509452|dbj|BAD31070.1| glycine-rich RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113610611|dbj|BAF20989.1| Os07g0187300 [Oryza sativa Japonica Group]
gi|222636576|gb|EEE66708.1| hypothetical protein OsJ_23377 [Oryza sativa Japonica Group]
Length = 308
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+FV GLS+ T+E +L AF +G+++E +V+++ R RGF F+ ++ AI G
Sbjct: 8 RIFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRAVDAAIRG 67
Query: 139 MHGKFLDGRVIFVEIAKSR 157
MH LDGR I V A+ R
Sbjct: 68 MHNGELDGRTISVNKAQPR 86
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 54/80 (67%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++L+V LS+ T++++LR F FG++ + ++ D+ R RGF F+ ++TEE++ A++
Sbjct: 2 SKLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVD 61
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
++ + LDGR I V +A +R
Sbjct: 62 ALNEQELDGRRIRVNVANAR 81
>gi|442749963|gb|JAA67141.1| Putative rna-binding protein rrm superfamily [Ixodes ricinus]
Length = 863
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 50/79 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+FV LS+ +ED + F+ FG + EV+L +DKI +P+GFAF+ + E + +A
Sbjct: 325 RIFVRNLSYTVTEDDIEALFKKFGPISEVHLSIDKITRKPKGFAFVSFMFPEHAIKAFSE 384
Query: 139 MHGKFLDGRVIFVEIAKSR 157
+ GK L GR++ + AK++
Sbjct: 385 LDGKLLQGRLLHLIPAKAK 403
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP-----RGFAFLRYATEEES 132
T LFV L+F T+ED+LR F G G + EV + K P G+ F+++ ++ +
Sbjct: 632 TTLFVKNLNFSTTEDALREHFAGCGPIHEVTIAKKKDLKNPGKMLSMGYGFVQFKLKQSA 691
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKSRAELRQA 163
++A++ + LD + ++++K + A
Sbjct: 692 KKALKQLQHSKLDEHAVELKLSKRETAQQTA 722
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIAN--RPRGFAFLRYATEEESRRA 135
T++ V + F ++ L+ F FG L ++ L K+A R RGFAF+ + T+ +++RA
Sbjct: 737 TKILVRNIPFEATKKELQELFSVFGTLRDIRLP-KKMAGTGRHRGFAFVDFLTKNDAKRA 795
Query: 136 IEGM-HGKFLDGRVIFVEIAKS 156
+ + L GR + +E A S
Sbjct: 796 FQALCQSTHLYGRRLVLEWASS 817
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+R+ V L R ED LR F G + ++ L K R FAF+ Y E ++ A E
Sbjct: 2 SRIIVKNLPKRVKEDRLREFFSSKGTITDLQLKYTK-EGVFRRFAFVGYKDEAQAAVAKE 60
Query: 138 GMHGKFLDGRVIFVEIAKS 156
H +LD + V+I K+
Sbjct: 61 YFHNAYLDTSKLQVDICKA 79
>gi|403300126|ref|XP_003940808.1| PREDICTED: RNA binding motif protein, X-linked-like-1-like, partial
[Saimiri boliviensis boliviensis]
Length = 268
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|300113043|ref|YP_003759618.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
gi|299538980|gb|ADJ27297.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
Length = 118
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS++ +++ LR AF+ +G++ +++DK +NR +GF F+ A++E++ AI+ M
Sbjct: 20 IYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAETAIKEM 79
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
H + GR I V A+ R E
Sbjct: 80 HDSDIKGRQIVVNEARPRNE 99
>gi|403256025|ref|XP_003920702.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Saimiri
boliviensis boliviensis]
Length = 391
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|148710225|gb|EDL42171.1| RNA binding motif protein, X chromosome, isoform CRA_b [Mus
musculus]
Length = 301
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|320163510|gb|EFW40409.1| Snrp70 protein [Capsaspora owczarzaki ATCC 30864]
Length = 320
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 56/96 (58%)
Query: 62 ACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGF 121
A P + +T P LF+S LS+ T+E+SL+ + +G + ++++V + ++PRG+
Sbjct: 88 AAWHPKENPNATSDPFKTLFISNLSYDTTEESLKREMEEYGSIKQIHIVRNTQTSKPRGY 147
Query: 122 AFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
AF+ + E + + A + G+ +DGR I V+ + R
Sbjct: 148 AFVEFEHERDMKDAYKQADGRKVDGRRIVVDFERGR 183
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 80 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 139
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 140 AMDGAVLDGRELRVQMAR 157
>gi|440800950|gb|ELR21976.1| RNA recognition motif domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 325
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%)
Query: 72 STCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEE 131
+ + +T+L+V+GL + T+ + L+ F G + +V L++D + R RGFAF+ +AT E+
Sbjct: 5 ANGEEETKLYVAGLHWETNREKLQELFGQHGTVTDVKLIVDHFSGRSRGFAFVSFATSED 64
Query: 132 SRRAIEGMHGKFLDGRVIFVEIA 154
+ A + M+ +DGR IFV+ A
Sbjct: 65 ATAARDAMNSADVDGRRIFVKKA 87
>gi|346716298|ref|NP_001231025.1| heterogeneous nuclear ribonucleoprotein G [Sus scrofa]
Length = 390
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 54/79 (68%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ T++D+LR AF FGQ+++ ++ D+ R RGF F+ +++ +E+ AI G
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAAIGG 63
Query: 139 MHGKFLDGRVIFVEIAKSR 157
++ + LDGR I V +A +R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
>gi|301769089|ref|XP_002919961.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Ailuropoda melanoleuca]
gi|281352732|gb|EFB28316.1| hypothetical protein PANDA_008640 [Ailuropoda melanoleuca]
Length = 391
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|302829787|ref|XP_002946460.1| hypothetical protein VOLCADRAFT_79186 [Volvox carteri f.
nagariensis]
gi|300268206|gb|EFJ52387.1| hypothetical protein VOLCADRAFT_79186 [Volvox carteri f.
nagariensis]
Length = 186
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
PKT L+V GL +E +L AF FG++ EVN+ +D RGF F+ Y +E++ A
Sbjct: 16 PKTTLYVGGLEETVNEATLHAAFLPFGEIKEVNIPLDHATGTHRGFGFVEYEEKEDAAAA 75
Query: 136 IEGMHGKFLDGRVIFVEIAK 155
I+ MH L GRV+ V A+
Sbjct: 76 IDNMHNAELFGRVLKVNYAQ 95
>gi|354605413|ref|ZP_09023401.1| hypothetical protein HMPREF9450_02316 [Alistipes indistinctus YIT
12060]
gi|353346955|gb|EHB91233.1| hypothetical protein HMPREF9450_02316 [Alistipes indistinctus YIT
12060]
Length = 109
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++S L+F T DSL+N F +G++ N++ D+ R RGF F+ A + E ++AI+ +
Sbjct: 3 IYISNLNFATKNDSLQNLFAAYGEVSSANIITDRETGRSRGFGFVEMANDAEGQQAIDAL 62
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
+ +G+VI V +A+ + E
Sbjct: 63 NDTEFEGKVIGVNVARPKTE 82
>gi|296217449|ref|XP_002755014.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Callithrix
jacchus]
Length = 394
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A+
Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVRD 68
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQAFKNNPR 169
M+GK LDG+ I V A + AFK++ R
Sbjct: 69 MNGKTLDGKAIKVAQA-----TKPAFKSSRR 94
>gi|417410380|gb|JAA51664.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase,
partial [Desmodus rotundus]
Length = 398
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 10 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 69
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 70 MNGKSLDGKAIKVEQA 85
>gi|400602889|gb|EJP70487.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 181
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY E +++ AI
Sbjct: 2 AKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYNQEADAQSAIA 61
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M+ DGR I V+ A
Sbjct: 62 AMNNVEFDGRTIRVDKASD 80
>gi|357472741|ref|XP_003606655.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355507710|gb|AES88852.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 112
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
T+LF++GLS+ T+E LR+ F+ GQ++EV ++ + +G+ F+R+ +E +
Sbjct: 30 HSSTKLFIAGLSYNTNETVLRDTFEQHGQIIEVKVICNHRTGESKGYGFVRFNSETAAAT 89
Query: 135 AIEGMHGKFLDGRVIFVEIA 154
A + +HG+ +DGR I V A
Sbjct: 90 ARKELHGQIVDGRRIRVGYA 109
>gi|327286673|ref|XP_003228054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Anolis carolinensis]
Length = 374
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|297711157|ref|XP_002832216.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Pongo abelii]
Length = 438
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 56 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 115
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 116 MNGKSLDGKAIKVEQA 131
>gi|426346596|ref|XP_004040962.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 221
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|285012962|ref|NP_001165510.1| heterogeneous nuclear ribonucleoprotein G [Bos taurus]
gi|348557903|ref|XP_003464758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|284080621|gb|ADB77884.1| Rbmx [Bos taurus]
gi|296471213|tpg|DAA13328.1| TPA: RNA binding motif protein, X-linked isoform 1 [Bos taurus]
gi|440895247|gb|ELR47495.1| Heterogeneous nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 391
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|380696527|ref|ZP_09861386.1| RNA-binding protein rbpA [Bacteroides faecis MAJ27]
Length = 100
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+++SGLS+ T++ L N F FG++ ++ D+ R RGFAF+ A + E ++AI+ +
Sbjct: 3 IYISGLSYGTNDADLTNLFAEFGEVSSAKVIFDRETGRSRGFAFVEMANDAEGQKAIDEL 62
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
+G D +VI V +A+ RAE
Sbjct: 63 NGVEYDQKVISVSVARPRAE 82
>gi|355715855|gb|AES05424.1| RNA binding motif protein, X-linked [Mustela putorius furo]
Length = 392
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 10 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 69
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 70 MNGKSLDGKAIKVEQA 85
>gi|291400889|ref|XP_002716811.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 391
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|402911572|ref|XP_003918396.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
gi|75076694|sp|Q4R7F0.1|RBMX_MACFA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|67969238|dbj|BAE00972.1| unnamed protein product [Macaca fascicularis]
gi|380813174|gb|AFE78461.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813176|gb|AFE78462.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813178|gb|AFE78463.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813180|gb|AFE78464.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813182|gb|AFE78465.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383411873|gb|AFH29150.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418689|gb|AFH32558.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418691|gb|AFH32559.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418693|gb|AFH32560.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418695|gb|AFH32561.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418697|gb|AFH32562.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418699|gb|AFH32563.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947302|gb|AFI37256.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947304|gb|AFI37257.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947306|gb|AFI37258.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947308|gb|AFI37259.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947310|gb|AFI37260.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947312|gb|AFI37261.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947314|gb|AFI37262.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 391
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|56699409|ref|NP_002130.2| RNA-binding motif protein, X chromosome isoform 1 [Homo sapiens]
gi|206725512|ref|NP_001128678.1| RNA-binding motif protein, X chromosome [Pan troglodytes]
gi|74008547|ref|XP_866434.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G isoform 6
[Canis lupus familiaris]
gi|149755726|ref|XP_001489601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Equus
caballus]
gi|397482297|ref|XP_003812367.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Pan
paniscus]
gi|410989483|ref|XP_004000991.1| PREDICTED: RNA-binding motif protein, X chromosome [Felis catus]
gi|23503093|sp|P38159.3|RBMX_HUMAN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Glycoprotein p43; AltName: Full=Heterogeneous
nuclear ribonucleoprotein G; Short=hnRNP G; Contains:
RecName: Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|160395526|sp|A5A6M3.1|RBMX_PANTR RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|13938569|gb|AAH07435.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|14279350|gb|AAK58567.1| RBMX [Homo sapiens]
gi|16306856|gb|AAH06550.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|39545947|gb|AAR28036.1| heterogeneous nuclear ribonucleoprotein G [Homo sapiens]
gi|119608859|gb|EAW88453.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608860|gb|EAW88454.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608861|gb|EAW88455.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608863|gb|EAW88457.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|123993071|gb|ABM84137.1| RNA binding motif protein, X-linked [synthetic construct]
gi|124000061|gb|ABM87539.1| RNA binding motif protein, X-linked [synthetic construct]
gi|146741480|dbj|BAF62396.1| RNA binding motif protein, X-linked [Pan troglodytes verus]
gi|410266422|gb|JAA21177.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266426|gb|JAA21179.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266428|gb|JAA21180.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266430|gb|JAA21181.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266432|gb|JAA21182.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266434|gb|JAA21183.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266436|gb|JAA21184.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348962|gb|JAA41085.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348964|gb|JAA41086.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348966|gb|JAA41087.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348968|gb|JAA41088.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348970|gb|JAA41089.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348972|gb|JAA41090.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348974|gb|JAA41091.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348976|gb|JAA41092.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRTS D L F +G++V++ + D+ RGFAF+RY +E+++AIE +
Sbjct: 18 LLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIERL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGREVDGRHIVVQFAK 93
>gi|344297709|ref|XP_003420539.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Loxodonta
africana]
Length = 391
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|343959058|dbj|BAK63384.1| heterogeneous nuclear ribonucleoprotein G [Pan troglodytes]
Length = 391
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|326924314|ref|XP_003208374.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Meleagris gallopavo]
Length = 385
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|291401898|ref|XP_002717345.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
gi|291408303|ref|XP_002720376.1| PREDICTED: RNA binding motif protein, X-linked [Oryctolagus
cuniculus]
Length = 391
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|350407885|ref|XP_003488228.1| PREDICTED: probable RNA-binding protein 19-like [Bombus impatiens]
Length = 900
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 51/81 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+F+ LS+ +ED++R F+ +G + EVNL +D+ +P+GF + + E + +A
Sbjct: 359 RMFIRNLSYTITEDNIRQLFEKYGPISEVNLPIDRTTRKPKGFGTITFLMAEHAVKAYSE 418
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
+ G LDGR++ V AK++++
Sbjct: 419 LDGSILDGRMLHVLPAKAKSD 439
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 70 SLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIA-NRPRGFAFLRYAT 128
S T Q T++ + + F+ + + + F+ FG+L V L + + RGFAF+ Y T
Sbjct: 771 STVTAQTGTKILIRNVPFQATVEEVTELFKAFGELKAVRLPKKLVGVEKHRGFAFVEYYT 830
Query: 129 EEESRRAIEGM-HGKFLDGRVIFVEIAKSRAELRQAFKNNPRQ 170
+ E+++A + + L GR + +E A++ + + K +
Sbjct: 831 KSEAKKAFKALCQSTHLYGRRLVLEWAQTEEGVEEVRKRTAKH 873
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP-----RGFAFLRYATEEES 132
T LFV ++F T+E+ L+ F G L V++ K P G+ F+RY + ++
Sbjct: 675 TTLFVKNINFTTTEEQLKTYFGKCGALHYVSIATKKDPKNPGAKLSMGYGFVRYKRKVDA 734
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKN 166
RA++ + L+G+ + E+ +S L K+
Sbjct: 735 DRALKVLQMTVLEGKTL--ELKRSERTLITDLKS 766
>gi|238010804|gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 65 PPSPHSLSTCQPK------TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP 118
PP P S+ P+ R++V LS+ +L N F G+++E ++ D+ + R
Sbjct: 158 PPPPRDRSSRSPQRPRGDANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRS 217
Query: 119 RGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
RGF F+ Y + EE AI + G LDGR I V +A+S+
Sbjct: 218 RGFGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAESK 256
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+FV L F L F+ G + V ++ DK+ R RGF F+ ++ EE A++
Sbjct: 82 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQ 141
Query: 139 MHGKFLDGRVIFV 151
+G LDGR + V
Sbjct: 142 FNGYVLDGRSLRV 154
>gi|452822390|gb|EME29410.1| RNA-binding protein [Galdieria sulphuraria]
Length = 106
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGF----GQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
RLF+ LS++TS + L+ AFQ +V ++VMD+ + R RGF F+ + + E++
Sbjct: 5 VRLFIGNLSWKTSSEGLKRAFQNAIGVEASVVNAHVVMDRYSGRSRGFGFVTFESPEDAA 64
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAE 159
A+ ++GK LDGR I V++A R E
Sbjct: 65 SAVNLLNGKELDGRAIRVDLAHEREE 90
>gi|380811822|gb|AFE77786.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383417591|gb|AFH32009.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 289
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|410227798|gb|JAA11118.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227802|gb|JAA11120.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227804|gb|JAA11121.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227806|gb|JAA11122.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227808|gb|JAA11123.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227810|gb|JAA11124.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227812|gb|JAA11125.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|296236539|ref|XP_002763369.1| PREDICTED: RNA-binding motif protein, X chromosome [Callithrix
jacchus]
Length = 289
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|119331082|ref|NP_001073196.1| heterogeneous nuclear ribonucleoprotein G [Gallus gallus]
gi|53130710|emb|CAG31684.1| hypothetical protein RCJMB04_9j22 [Gallus gallus]
gi|169139272|gb|ACA48585.1| RNA binding motif protein, X-linked [Gallus gallus]
Length = 385
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|2674201|gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T++ SL+ AF +G++++ ++ D+ R RGF F+ + E+ R AI+G
Sbjct: 8 RCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQG 67
Query: 139 MHGKFLDGRVIFVEIAK 155
M+ + LDGR I V A+
Sbjct: 68 MNSQELDGRNITVNEAQ 84
>gi|410308290|gb|JAA32745.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308292|gb|JAA32746.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308294|gb|JAA32747.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308296|gb|JAA32748.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308298|gb|JAA32749.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308300|gb|JAA32750.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308302|gb|JAA32751.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308304|gb|JAA32752.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|390474384|ref|XP_002757703.2| PREDICTED: RNA-binding motif protein, X chromosome-like, partial
[Callithrix jacchus]
Length = 391
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 52/91 (57%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+L+V + F SED LR F+ FG+++ + L D R RGF F++Y E++++A E
Sbjct: 306 TKLYVGSIHFSISEDDLRTIFEPFGEVISLQLHKDPETGRSRGFGFVQYKNHEDAKKAFE 365
Query: 138 GMHGKFLDGRVIFVEIAKSRAELRQAFKNNP 168
++G L GR + V +A + A+ Q P
Sbjct: 366 QLNGLDLAGRPLKVGLATAEAQKLQVLGAIP 396
>gi|380019745|ref|XP_003693763.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Apis
florea]
Length = 409
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ T P LFV+ +++ TSE LR F+ +G + ++ ++ + I +PRG
Sbjct: 85 IAVWDPAGIPNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+AF+ Y E + A + GK +DGR + V++ ++R
Sbjct: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERART 182
>gi|340715914|ref|XP_003396452.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
terrestris]
gi|350396793|ref|XP_003484667.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
impatiens]
Length = 409
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ T P LFV+ +++ TSE LR F+ +G + ++ ++ + I +PRG
Sbjct: 85 IAVWDPAGIPNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+AF+ Y E + A + GK +DGR + V++ ++R
Sbjct: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERART 182
>gi|3256007|emb|CAA80599.1| hnRNP G protein [Homo sapiens]
Length = 391
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|449498359|ref|XP_004175818.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 2
[Taeniopygia guttata]
Length = 385
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|108744011|gb|ABG02278.1| heterogeneous nuclear ribonucleoprotein G [Haplochromis burtoni]
Length = 391
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKPIKVEQA 84
>gi|71043834|ref|NP_001020834.1| RNA-binding motif protein, X chromosome [Rattus norvegicus]
gi|81907907|sp|Q4V898.1|RBMX_RAT RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; AltName: Full=RNA-binding motif protein,
X chromosome retrogene; AltName: Full=RNA-binding motif
protein, X chromosome retrogene-like; Contains: RecName:
Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|66910650|gb|AAH97479.1| RNA binding motif protein, X-linked [Rattus norvegicus]
gi|149015799|gb|EDL75123.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_b [Rattus norvegicus]
Length = 390
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|4803739|dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona intestinalis]
Length = 158
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
++FV LS+ +ED LR F G GQ+ EV ++ D+ R RGFAF+ +++E E+ AIE
Sbjct: 5 KVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDAIEN 64
Query: 139 MHGKFLDGRVIFVEIAKSR 157
++ + GR + V A+S+
Sbjct: 65 LNESDVAGRNVSVRQAQSK 83
>gi|383866115|ref|XP_003708517.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Megachile rotundata]
Length = 410
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ T P LFV+ +++ TSE LR F+ +G + ++ ++ + I +PRG
Sbjct: 85 IAVWDPAGIPNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+AF+ Y E + A + GK +DGR + V++ ++R
Sbjct: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERART 182
>gi|340992759|gb|EGS23314.1| hypothetical protein CTHT_0009820 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 191
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T + +L+ F+ FG + E +V D+ R RGF F+RY E ++++A++
Sbjct: 2 SKLFIGGLAWHTEDATLKKKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNEADAQKAMD 61
Query: 138 GMHGKFLDGRVIFVEIA 154
M+ DGR I V+ A
Sbjct: 62 AMNNVEFDGRQIRVDKA 78
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea mays]
Length = 274
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F+ +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|83032218|gb|ABB97027.1| unknown [Brassica rapa]
Length = 208
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C +++FV G+S+ T E LR AF +G++V+ +++D+ R RGFAF+ + + EE+
Sbjct: 30 CMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEAS 89
Query: 134 RAIEGMHGKFLDGRVIFVEIA 154
A++ + G+ L GR I V A
Sbjct: 90 NAMQ-LDGQDLHGRRIRVNYA 109
>gi|156346232|ref|XP_001621481.1| hypothetical protein NEMVEDRAFT_v1g76367 [Nematostella vectensis]
gi|156207460|gb|EDO29381.1| predicted protein [Nematostella vectensis]
Length = 88
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ + ++ LS+ E +L + F G+ +V+VN++ D+ RPRGF F+ + ++EE +AI
Sbjct: 6 ENKCYIGNLSYSVDEQALEDKFHGY-NVVDVNIITDRETGRPRGFGFVTFGSKEEMEKAI 64
Query: 137 EGMHGKFLDGRVIFVEIAKSRAE 159
+ G+ LDGR + V A+ R E
Sbjct: 65 DEFDGQDLDGRPMKVNKAQPRGE 87
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a [Mus
musculus]
Length = 241
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|22022313|dbj|BAC06513.1| transformer-2a [Oryzias latipes]
gi|49204529|dbj|BAD24699.1| transformer-2a3 [Oryzias latipes]
Length = 283
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P L V GLS T+E LR F +G L EVN+V D+ + R RGFAF+ + E+S+
Sbjct: 112 DPSCCLGVFGLSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKE 171
Query: 135 AIEGMHGKFLDGRVIFVEIA 154
A E +G LDGR I V+ +
Sbjct: 172 AKEQANGMELDGRRIRVDFS 191
>gi|242041407|ref|XP_002468098.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
gi|241921952|gb|EER95096.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
Length = 484
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
L P +T P LFV+ L++ TSE ++ F+G+G + V LV +K ++PRG
Sbjct: 121 LQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKDTSKPRG 180
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+AF+ Y + + A + G+ +D R + V++ + R
Sbjct: 181 YAFIEYVHTRDMKNAYKQADGRKVDNRRVLVDVERGR 217
>gi|4098582|gb|AAD00328.1| RBM1 [Sminthopsis macroura]
Length = 390
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E L + F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKGLESVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKSIKVEQA 84
>gi|168015818|ref|XP_001760447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688461|gb|EDQ74838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRTS D L F +G++V++ + D+ RGFAF+RY +E+++AIE +
Sbjct: 18 LLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIERL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRTVDGRNIVVQSAK 93
>gi|149015798|gb|EDL75122.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_a [Rattus norvegicus]
Length = 306
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|157278157|ref|NP_001098178.1| transformer 2a [Oryzias latipes]
gi|49204524|dbj|BAD24698.1| transformer-2a2 [Oryzias latipes]
gi|49204534|dbj|BAD24700.1| transformer-2a4 [Oryzias latipes]
Length = 186
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P L V GLS T+E LR F +G L EVN+V D+ + R RGFAF+ + E+S+
Sbjct: 15 DPSCCLGVFGLSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKE 74
Query: 135 AIEGMHGKFLDGRVIFVEIAKSR 157
A E +G LDGR I V+ + ++
Sbjct: 75 AKEQANGMELDGRRIRVDFSITK 97
>gi|6755296|ref|NP_035382.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|262231769|ref|NP_001160095.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|81917893|sp|Q9WV02.1|RBMX_MOUSE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|5579011|emb|CAB51362.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|13277600|gb|AAH03710.1| RNA binding motif protein, X chromosome [Mus musculus]
gi|74149379|dbj|BAE22448.1| unnamed protein product [Mus musculus]
gi|148710228|gb|EDL42174.1| RNA binding motif protein, X chromosome, isoform CRA_e [Mus
musculus]
Length = 391
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|426346594|ref|XP_004040961.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 219
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|25152876|ref|NP_498565.2| Protein RNP-7 [Caenorhabditis elegans]
gi|351065637|emb|CCD61618.1| Protein RNP-7 [Caenorhabditis elegans]
Length = 332
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 39 KRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAF 98
KRR D L + + +G +A P+ + ++ P LFV +++ TSE LR F
Sbjct: 71 KRRQKDELLAYKVEQG------IATWNPAENPRASEDPYRTLFVGRINYETSESKLRREF 124
Query: 99 QGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
+ +G++ ++ +V D+ A +PRG+AF+ Y+ + E A + G +DG+ + V+ + R
Sbjct: 125 EAYGKIKKLTMVHDE-AGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYERGRT 183
Query: 159 E 159
+
Sbjct: 184 Q 184
>gi|3342756|gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum]
Length = 144
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ + +LFV GLSF ++E SL +AF +G + + +V D+ R RGF F+ + ++
Sbjct: 2 SSSDEGKLFVGGLSFDSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVTFRNPSDA 61
Query: 133 RRAIEGMHGKFLDGRVIFVEIA 154
+ A+ M+G+ LDGR I V++A
Sbjct: 62 KEALHAMNGESLDGRQIRVDLA 83
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|224097264|ref|XP_002190045.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 1
[Taeniopygia guttata]
Length = 377
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|148909922|gb|ABR18047.1| unknown [Picea sitchensis]
Length = 267
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRTS D L F +G++V++ + D+ RGFAF RY +E+++A+E +
Sbjct: 18 LLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFFRYKYADEAQKAVERL 77
Query: 140 HGKFLDGRVIFVEIAK 155
GK +DGR I V+ AK
Sbjct: 78 DGKNVDGRYIMVQFAK 93
>gi|149015800|gb|EDL75124.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_c [Rattus norvegicus]
Length = 289
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|145233965|ref|XP_001400355.1| glycine-rich RNA-binding protein 2 [Aspergillus niger CBS 513.88]
gi|134057294|emb|CAK37908.1| unnamed protein product [Aspergillus niger]
gi|350635078|gb|EHA23440.1| hypothetical protein ASPNIDRAFT_197860 [Aspergillus niger ATCC
1015]
Length = 116
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL++ T++++LR F +G + E +V D +R RGF F+R+A++ E+ A+
Sbjct: 3 KLFIGGLAWHTTDETLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDVEADAAMNA 62
Query: 139 MHGKFLDGRVIFVEIA 154
M+ + DGRVI V+ A
Sbjct: 63 MNNQEFDGRVIRVDKA 78
>gi|5579009|emb|CAB51361.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|74228065|dbj|BAE37998.1| unnamed protein product [Mus musculus]
gi|148710226|gb|EDL42172.1| RNA binding motif protein, X chromosome, isoform CRA_c [Mus
musculus]
Length = 289
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|302765773|ref|XP_002966307.1| hypothetical protein SELMODRAFT_439636 [Selaginella moellendorffii]
gi|300165727|gb|EFJ32334.1| hypothetical protein SELMODRAFT_439636 [Selaginella moellendorffii]
Length = 289
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
T +T ++V GL++ +ED +R+ F+ FG++ +V ++ D + RG+ F+ +AT E +
Sbjct: 2 TVSDQTSVYVGGLAYDVTEDLIRSTFEEFGEIDKVKIIQDHDG-QSRGYGFITFATSEAA 60
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKSRA 158
AI GM+GK + GR I V K+R
Sbjct: 61 NGAIYGMNGKVVAGRSIRVNEVKNRG 86
>gi|345306629|ref|XP_001510789.2| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Ornithorhynchus anatinus]
Length = 420
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 35 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 94
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 95 MNGKSLDGKAIKVEQA 110
>gi|15231912|ref|NP_187457.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|6648212|gb|AAF21210.1|AC013483_34 putative RNA-binding protein [Arabidopsis thaliana]
gi|45752630|gb|AAS76213.1| At3g08000 [Arabidopsis thaliana]
gi|46359799|gb|AAS88763.1| At3g08000 [Arabidopsis thaliana]
gi|332641108|gb|AEE74629.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 143
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLS+ E SL++AF FG++ EV + DK + R RGF F+ +A E ++ A +
Sbjct: 42 KLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 101
Query: 139 MHGKFLDGRVIFVEIAKSRA 158
M GK L GR + + A R
Sbjct: 102 MDGKGLLGRPLRISFALERV 121
>gi|171680237|ref|XP_001905064.1| hypothetical protein [Podospora anserina S mat+]
gi|170939745|emb|CAP64971.1| unnamed protein product [Podospora anserina S mat+]
Length = 176
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY +++++AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNPDDAQKAIS 61
Query: 138 GMHGKFLDGRVIFVEIA 154
M DGR I V+ A
Sbjct: 62 AMKNIEFDGRQIRVDKA 78
>gi|426245729|ref|XP_004016657.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Ovis
aries]
Length = 174
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T E SL AF +G + EV L+ D+ N+ RGFAF+ + + +++ A+
Sbjct: 9 KLFIGGLNHETDEKSLEAAFGKYGHISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I V A
Sbjct: 69 MNGKSLDGKAIKVAQA 84
>gi|47229936|emb|CAG10350.1| unnamed protein product [Tetraodon nigroviridis]
Length = 243
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
P + L V GLS T+E LR F +G L +VN+V D+ + R RGFAF+ + E+S+
Sbjct: 77 DPNSCLGVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFENSEDSKE 136
Query: 135 AIEGMHGKFLDGRVIFVEIA 154
A E +G LDGR I V+ +
Sbjct: 137 AKEHANGMELDGRRIRVDYS 156
>gi|357119205|ref|XP_003561336.1| PREDICTED: uncharacterized protein LOC100827239 [Brachypodium
distachyon]
Length = 314
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ ++R+FV GLSF T E L AF+ FG++V+ +++++ NR RGF F+ ++
Sbjct: 4 KEESRIFVGGLSFHTDERKLEEAFRRFGKVVDAQIMLERHTNRHRGFGFVTFSDPRAVES 63
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AI MH K LDGR I V A+
Sbjct: 64 AISEMHTKELDGRTISVNRAE 84
>gi|354475287|ref|XP_003499861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Cricetulus griseus]
Length = 289
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|262199927|ref|YP_003271136.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262083274|gb|ACY19243.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 207
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLV-EVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
++L+V LS+ T+E++LR+ F+ G+ V V +++D+ R RGFAF++ A+E+ +R A+
Sbjct: 3 SKLYVGNLSYSTTEEALRSVFEEGGKEVRSVAIILDRETGRSRGFAFVQMASEDAAREAM 62
Query: 137 EGMHGKFLDGRVIFVEIAKSR 157
E + G+ LDGR + + A+ R
Sbjct: 63 ESLDGRELDGRQMRITEARER 83
>gi|328777938|ref|XP_623789.3| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa isoform 1
[Apis mellifera]
Length = 409
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
T P LFV+ +++ TSE LR F+ +G + ++ ++ + I +PRG+AF+ Y E +
Sbjct: 97 TADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDM 156
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKSRA 158
A + GK +DGR + V++ ++R
Sbjct: 157 HSAYKHADGKKIDGRRVLVDVERART 182
>gi|413934408|gb|AFW68959.1| U1 snRNP [Zea mays]
Length = 491
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
L P +T P LFV+ L++ TSE ++ F+G+G + V LV +K ++PRG
Sbjct: 121 LQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKDTSKPRG 180
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+AF+ Y + + A + G+ +D R + V++ + R
Sbjct: 181 YAFIEYVHTRDMKNAYKQADGRKVDNRRVLVDVERGR 217
>gi|326527725|dbj|BAK08137.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528387|dbj|BAJ93382.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ +LF+ G+S+ T+E+ L+ F FG++ + ++ DK+ RPRGF F+ YA A+
Sbjct: 5 QGKLFIGGISWETTEEKLQEHFSNFGEVSQAAVMRDKLTGRPRGFGFVVYADPASVDAAL 64
Query: 137 EGMHGKFLDGRVIFVEIAKSRAELRQAFKNNP 168
+ H LDGR + V+ A SR E + NP
Sbjct: 65 QEPH--TLDGRTVDVKRALSREEQQATKAVNP 94
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
++FV GL +++ R FQ FG + +V ++ D+ RPRGF F+ + +E+ R
Sbjct: 119 KIFVGGLPSSLTDEEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRV--- 175
Query: 139 MHGKFLDGRVIFVEIAKS 156
+H F D VE+ ++
Sbjct: 176 LHKTFHDLGGKMVEVKRA 193
>gi|59802519|gb|AAX07503.1| unknown [Gemmata sp. Wa1-1]
Length = 122
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 50/79 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LS+ ++ L++ F +G +V ++MD+ R +GF F+ T++E++ AI G
Sbjct: 41 KLYVGNLSWGVTDSQLQDMFTPYGSVVSAQVIMDRDTGRSKGFGFVEMGTDQEAQAAITG 100
Query: 139 MHGKFLDGRVIFVEIAKSR 157
MHG+ ++GR + V A+ +
Sbjct: 101 MHGQVIEGRPLTVNEARPK 119
>gi|387914322|gb|AFK10770.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392876160|gb|AFM86912.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 133
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+ +LFV GLSF T E SL F +GQ+ EV ++ D+ RGF F+ + +++ A
Sbjct: 3 DEGKLFVGGLSFSTDEQSLEEVFSEYGQISEVRVIKDRDTQLSRGFGFITFENPGDAKDA 62
Query: 136 IEGMHGKFLDGRVIFVEIAKSRA 158
+ M+GK +DGR I V+ A+ ++
Sbjct: 63 LLAMNGKSIDGRQIRVDQAEKKS 85
>gi|406964974|gb|EKD90666.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 118
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LF+ G+ F + + L+ F+ +G + ++MDK N+ +GFAF+ + E++ AI+
Sbjct: 2 TKLFIGGIPFSLTNEKLKELFEKYGTVSSAQIIMDKYTNQSKGFAFVEMPNDTEAQTAIK 61
Query: 138 GMHGKFLDGRVIFVEIAKSRAELRQAFKNNPRQN 171
+ G L+GR I V +A+ R + R + N N
Sbjct: 62 ELDGFGLEGRKIGVSVARPREDNRGGYNQNRNNN 95
>gi|390600853|gb|EIN10247.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 329
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V GLS RT E L + F FGQ+ +V +V D+ + R RGF F++ AT E++ +AIE +
Sbjct: 77 LGVFGLSIRTQERDLDDEFSRFGQVEKVTIVYDQRSGRSRGFGFIKMATVEDATKAIENL 136
Query: 140 HGKFLDGRVIFVEIA 154
+G L+GR I V+ +
Sbjct: 137 NGVDLNGRRIRVDYS 151
>gi|374376206|ref|ZP_09633864.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373233046|gb|EHP52841.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 110
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS+ + L+N F +G++ +V DK NR +GF F+ AT+EE++ AIE +
Sbjct: 3 IYVGNLSWNLKDQDLQNLFAPYGEVTSAKIVSDKFTNRSKGFGFVEMATDEEAKAAIEAL 62
Query: 140 HGKFLDGRVIFV 151
+G +DGR I V
Sbjct: 63 NGTEVDGRNIVV 74
>gi|383760540|ref|YP_005439526.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
gi|381381210|dbj|BAL98027.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
Length = 161
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V L++ +DSL+ AF FG + ++MD+ R +GF F+ ++ E++ AI G
Sbjct: 4 KLYVGNLAYSVRDDSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAAING 63
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
M+G+ L+GR I V A+ R +
Sbjct: 64 MNGQPLEGRAIVVNEARPRED 84
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|375332101|gb|AFA52590.1| hypothetical protein [Vaucheria litorea]
Length = 312
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFV+ +S+ TSE LR F+ +GQ+ ++ LV D + ++PRG+AF+ Y EE+ A +
Sbjct: 118 LFVANMSYDTSEKKLRREFEQYGQIKKIRLVND-LEDQPRGYAFIEYEREEDMHMAYKKA 176
Query: 140 HGKFLDGRVIFVEIAKSRA 158
G+ +D R + V++ + R
Sbjct: 177 DGRKVDSRRLLVDVERGRT 195
>gi|224125712|ref|XP_002329699.1| predicted protein [Populus trichocarpa]
gi|222870607|gb|EEF07738.1| predicted protein [Populus trichocarpa]
Length = 55
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/34 (79%), Positives = 32/34 (94%)
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
LVMDKIA RP+GFAF+RY TEEE+++AIEGMHGK
Sbjct: 11 LVMDKIAKRPKGFAFIRYETEEEAQKAIEGMHGK 44
>gi|449451513|ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
gi|449504870|ref|XP_004162317.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 51/85 (60%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
T P LFV+ L++ T+E ++ F+ +G + V L+ DK+ +P+G+AF+ Y + +
Sbjct: 133 TGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDM 192
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKSR 157
+ A + G+ +DGR + V++ + R
Sbjct: 193 KAAYKQADGRKIDGRRVLVDVERGR 217
>gi|344270020|ref|XP_003406844.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Loxodonta africana]
Length = 477
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF GL T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 95 KLFTGGLHTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESSADAKDAARD 154
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 155 MNGKSLDGKAIKVEQA 170
>gi|402860841|ref|XP_003894827.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
Length = 391
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDQKINKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|303328239|ref|ZP_07358677.1| RNA-binding protein [Desulfovibrio sp. 3_1_syn3]
gi|345893613|ref|ZP_08844407.1| hypothetical protein HMPREF1022_03067 [Desulfovibrio sp.
6_1_46AFAA]
gi|302861569|gb|EFL84505.1| RNA-binding protein [Desulfovibrio sp. 3_1_syn3]
gi|345046026|gb|EGW49923.1| hypothetical protein HMPREF1022_03067 [Desulfovibrio sp.
6_1_46AFAA]
Length = 87
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T ++V LSF +++ L N F +G + VNL+MD++ RPRGF F+ E+++R AI
Sbjct: 3 TSIYVGNLSFSSTQAGLENLFSQYGTPLSVNLIMDRVTGRPRGFGFVEM-EEDDARNAIA 61
Query: 138 GMHGKFLDGRVIFVEIAKSR 157
G++G +GR + V A+ R
Sbjct: 62 GLNGVEFEGRTLRVNEAEKR 81
>gi|293335932|ref|NP_001168160.1| uncharacterized protein LOC100381912 [Zea mays]
gi|223946377|gb|ACN27272.1| unknown [Zea mays]
gi|414872130|tpg|DAA50687.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea mays]
Length = 297
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R+FV GLS++T E L +AF FG++V+ +++++ NR RGF F+ +
Sbjct: 4 KEEGRIFVGGLSWQTDERKLEDAFGRFGKVVDAQIMVERHTNRHRGFGFVTFEDRRAVDS 63
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AI+ MHG+ +DGR I V A+
Sbjct: 64 AIKEMHGQEIDGRTISVNKAE 84
>gi|355568958|gb|EHH25239.1| hypothetical protein EGK_09022 [Macaca mulatta]
Length = 222
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|346322586|gb|EGX92185.1| glycine-rich RNA-binding protein [Cordyceps militaris CM01]
Length = 182
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY + +++ AI
Sbjct: 2 AKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQDADAQSAIA 61
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M+ DGR I V+ A
Sbjct: 62 AMNNVEFDGRTIRVDKASD 80
>gi|403280479|ref|XP_003931745.1| PREDICTED: uncharacterized protein LOC101052045 [Saimiri
boliviensis boliviensis]
Length = 209
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|227206222|dbj|BAH57166.1| AT2G21660 [Arabidopsis thaliana]
Length = 99
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+++ + R FV GL++ T + +L AF +G +++ ++ D+ R RGF F+ + E+
Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 131 ESRRAIEGMHGKFLDGRVI 149
+ AIEGM+G+ LDGR I
Sbjct: 61 AMKDAIEGMNGQDLDGRSI 79
>gi|224100725|ref|XP_002311989.1| predicted protein [Populus trichocarpa]
gi|222851809|gb|EEE89356.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ R+FV GLS+ +E L NAF FG++VE +++++ RPRGF F+ +A AI
Sbjct: 2 ENRIFVGGLSWDITERQLENAFDRFGKIVECQVMLERDTGRPRGFGFITFADRRAMDDAI 61
Query: 137 EGMHGKFLDGRVIFVEIAK 155
MHG+ RVI V A+
Sbjct: 62 REMHGRDFGDRVISVNKAQ 80
>gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus]
Length = 254
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|374373120|ref|ZP_09630780.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373234093|gb|EHP53886.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 88
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++VS L F S+D LR F FGQ+ ++MD+ + RGF F+ + ++ A++ +
Sbjct: 3 MYVSNLGFHASDDDLRELFSSFGQVSSAKVIMDRTTGKSRGFGFVEMGSVSDATLAMKEL 62
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
GK +DGR I V AK R E
Sbjct: 63 DGKDVDGRRIAVSAAKEREE 82
>gi|345569077|gb|EGX51946.1| hypothetical protein AOL_s00043g680 [Arthrobotrys oligospora ATCC
24927]
Length = 150
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LFV GL++ T + +LR F+ FGQ+ E +V D+ R RGF F+R+ E ++ A+
Sbjct: 2 SKLFVGGLAWHTDDQTLRTKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTNEADATTAMN 61
Query: 138 GMHGKFLDGRVIFVEIA 154
M+ DGR I V+ A
Sbjct: 62 AMNNTEFDGRYIRVDKA 78
>gi|343427628|emb|CBQ71156.1| related to glycine-rich RNA-binding protein [Sporisorium reilianum
SRZ2]
Length = 175
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ T++DSL +AF +GQL + ++ D+ R RGF F+ +AT+ E+ AI
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQAEADAAIAA 63
Query: 139 MHGKFLDGRVIFVEIAKSR 157
+H + LDGR I V +A SR
Sbjct: 64 LHDQELDGRRIRVNMANSR 82
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F +G++V+V + D+ RGFAF+RY ++E+ +A+E +
Sbjct: 18 LLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRVVDGREITVQFAK 93
>gi|440912647|gb|ELR62200.1| Heterogeneous nuclear ribonucleoprotein G, partial [Bos grunniens
mutus]
Length = 206
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T E SL F +G++ EV L+ D+ N+ RGFAF+ + + +++ A+
Sbjct: 9 KLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I V A
Sbjct: 69 MNGKSLDGKAIKVAQA 84
>gi|149462268|ref|XP_001517310.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like, partial
[Ornithorhynchus anatinus]
Length = 232
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 67 SPHSLSTCQPKT--RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
PH+ S Q LFV+ +++ T+E LR F+ +G + +++V K + +PRG+AF+
Sbjct: 90 DPHNDSNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFI 149
Query: 125 RYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
Y E + A + GK +DGR + V++ + R
Sbjct: 150 EYEHERDMHSAYKHADGKKIDGRRVLVDVERGRT 183
>gi|432112552|gb|ELK35268.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 168
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GLSF T+++SLR+ F+ +G L + ++ D R RGF F+ YAT EE A+
Sbjct: 74 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 133
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQAF 164
K +DGRV+ + A SR E+R AF
Sbjct: 134 RPHK-VDGRVVEPKRAVSR-EVRDAF 157
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea mays]
Length = 264
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F+ +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|293336929|ref|NP_001168878.1| uncharacterized protein LOC100382683 [Zea mays]
gi|223973459|gb|ACN30917.1| unknown [Zea mays]
gi|414871120|tpg|DAA49677.1| TPA: hypothetical protein ZEAMMB73_860016 [Zea mays]
Length = 443
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ +LF+ G+S+ T+E+ L F +G++ + ++ DK RPRGF F+ +A RA+
Sbjct: 5 QGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKTTGRPRGFGFVVFADPAVVDRAL 64
Query: 137 EGMHGKFLDGRVIFVEIAKSRAELRQAFKNNP 168
+ H LDGR + V+ A SR E + + NP
Sbjct: 65 QDPH--TLDGRTVDVKRALSREEQQASKAANP 94
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
++FV GL +ED R FQ FG + +V ++ D+ RPRGF F+ + +E+
Sbjct: 116 KIFVGGLPSTLTEDGFRQYFQTFGIVTDVVVMYDQNTQRPRGFGFITFDSED 167
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F+ +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|321464386|gb|EFX75394.1| sex-lethal protein variant 1 [Daphnia pulex]
Length = 263
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 77 KTRLFVSGLSFR-TSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
+T L+V+ L R +ED L N F G +V++NL+ DKI PRG AF+R+ EE+ A
Sbjct: 112 ETNLYVTNLPSRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEALAA 171
Query: 136 IEGMHGKFLDGRV--IFVEIAKSRAELRQAF 164
IE ++G GR I V+IA+ + + A+
Sbjct: 172 IEHLNGTIPHGRTNPISVKIAEEHGKQKAAY 202
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRTS D L F +G++V++ + D+ RGFAF+RY +E+++AIE +
Sbjct: 18 LLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIERL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGREVDGRHIVVQFAK 93
>gi|355718912|gb|AES06428.1| splicing factor, arginine/serine-rich 2 [Mustela putorius furo]
Length = 108
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|148678911|gb|EDL10858.1| mCG7984 [Mus musculus]
Length = 388
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VE+ L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F +G++V+V + D+ RGFAF+RY ++E+ +A+E +
Sbjct: 18 LLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRVVDGREITVQFAK 93
>gi|449267951|gb|EMC78842.1| Heterogeneous nuclear ribonucleoprotein G [Columba livia]
Length = 385
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAQDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F +G++V+V + D+ RGFAF+RY ++E+ +A+E +
Sbjct: 18 LLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRVVDGREITVQFAK 93
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F+ +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|83699420|ref|NP_033059.2| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|355390287|ref|NP_001239018.1| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|81916088|sp|Q91VM5.1|RMXL1_MOUSE RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
AltName: Full=RNA binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA binding motif
protein, X-linked-like-1, N-terminally processed
gi|15030328|gb|AAH11441.1| Rbmxrt protein [Mus musculus]
gi|26334797|dbj|BAC31099.1| unnamed protein product [Mus musculus]
gi|58476937|gb|AAH89350.1| RNA binding motif protein, X chromosome retrogene [Mus musculus]
Length = 388
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VE+ L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|330847369|gb|AEC46650.1| cold inducible RNA binding protein transcript variant 2 [Sus
scrofa]
Length = 182
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R R F F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIA 154
A+ M+GK +DGR I V+ A
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQA 82
>gi|330847367|gb|AEC46649.1| cold inducible RNA binding protein transcript variant 1 [Sus
scrofa]
Length = 172
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R R F F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIA 154
A+ M+GK +DGR I V+ A
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQA 82
>gi|49343272|gb|AAT64945.1| U1 snRNP [Zea mays]
gi|49343276|gb|AAT64946.1| U1 snRNP [Zea mays]
Length = 491
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
L P +T P LFV+ L++ TSE ++ F+G+G + V LV +K ++PRG
Sbjct: 121 LQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKDTSKPRG 180
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+AF+ Y + + A G+ +D R + V++ + R
Sbjct: 181 YAFIEYVHTRDMKNAYPAADGRKVDNRRVLVDVERGR 217
>gi|350535477|ref|NP_001233126.1| cold-inducible RNA-binding protein [Sus scrofa]
gi|330847371|gb|AEC46651.1| cold inducible RNA binding protein transcript variant 3 [Sus
scrofa]
Length = 144
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GLSF T+E SL F +GQ+ EV +V D+ R R F F+ + ++++
Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIA 154
A+ M+GK +DGR I V+ A
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQA 82
>gi|18422781|ref|NP_568681.1| small subunit ribosomal protein S19 [Arabidopsis thaliana]
gi|21542438|sp|P39697.2|RT19_ARATH RecName: Full=40S ribosomal protein S19, mitochondrial; Flags:
Precursor
gi|15028321|gb|AAK76637.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
gi|20259155|gb|AAM14293.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
gi|332008115|gb|AED95498.1| small subunit ribosomal protein S19 [Arabidopsis thaliana]
Length = 212
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 55 RGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKI 114
+G P++ + S +ST +L++ GLS T E SL++AF F + E ++ +K+
Sbjct: 13 QGVNVPVSSMLGSLRYMST-----KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKV 67
Query: 115 ANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAEL 160
R RG+ F+ + +E+ + AI M+G+ L+G I V +AK L
Sbjct: 68 TGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDWPSL 113
>gi|449465308|ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207282 [Cucumis sativus]
gi|449524890|ref|XP_004169454.1| PREDICTED: uncharacterized LOC101207282 [Cucumis sativus]
Length = 283
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
+ + R+FV GLS+ SE L NAF FG+++E +++++ RPRGF F+ +A
Sbjct: 2 ASKDEYRIFVGGLSWNISERQLENAFIRFGKMLETQIMLERDTGRPRGFGFITFADRRGM 61
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKSRAE 159
AI MHG+ L R+I V A+ + E
Sbjct: 62 DDAIREMHGQELGERIISVNKAEPKME 88
>gi|354477196|ref|XP_003500808.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Cricetulus griseus]
gi|344244124|gb|EGW00228.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 388
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G++VE+ L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKAIKVEQA 84
>gi|224149436|ref|XP_002336806.1| predicted protein [Populus trichocarpa]
gi|222836937|gb|EEE75330.1| predicted protein [Populus trichocarpa]
Length = 112
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 57/98 (58%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
C ++LF+ GL + + +L+ AF G+G+++E ++MD+ R RGF F+ Y + E +
Sbjct: 10 CMSSSKLFIGGLPWSADDHTLKEAFSGYGEVIEARVIMDRETGRSRGFGFVSYDSSESAS 69
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKNNPRQN 171
A M G+ L GR + V A+ R+ +++ ++ + N
Sbjct: 70 EAQSAMDGQELGGRNVRVSFAEERSRPPRSYNDDYQGN 107
>gi|242003896|ref|XP_002422903.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus
humanus corporis]
gi|212505785|gb|EEB10165.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus
humanus corporis]
Length = 309
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P ++T P LFV+ +++ TSE LR F+ +G + ++ + + I +PRG
Sbjct: 85 IAVWDPHNIPIATGDPFKTLFVARINYDTSEFKLRREFEVYGPIKKIVVSHNTINGKPRG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+AF+ Y E + A + GK +DGR + V++ ++R
Sbjct: 145 YAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERAR 181
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F+ +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|331241775|ref|XP_003333535.1| hypothetical protein PGTG_14957 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312525|gb|EFP89116.1| small subunit ribosomal protein S19 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 206
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + S+S+ +LFV L++ T SL++AF FG +V+ ++ D+ R RGF F+
Sbjct: 19 PRTLSSMSSPPGGNKLFVGNLAWTTDSGSLKSAFGQFGDVVDAIVMQDRETGRSRGFGFI 78
Query: 125 RYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+ E + AIE ++G+ LDGR I V A S+
Sbjct: 79 TFKEEAAAPGAIEALNGQELDGREIRVNYANSQ 111
>gi|302806250|ref|XP_002984875.1| hypothetical protein SELMODRAFT_446044 [Selaginella moellendorffii]
gi|300147461|gb|EFJ14125.1| hypothetical protein SELMODRAFT_446044 [Selaginella moellendorffii]
Length = 354
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+RL VS LS +E L+ F +G ++ V+L MDK N P+GFA++ Y ++ ++ +A +
Sbjct: 59 SRLHVSQLSRNVNESHLKEIFGNYGDIIAVDLAMDKTVNLPKGFAYVDYKSKSDAEKAQQ 118
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G +DG VI V++ +
Sbjct: 119 FMDGAQVDGLVISVKLTR 136
>gi|193215305|ref|YP_001996504.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193088782|gb|ACF14057.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 104
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS+ +E+ LR+ F +G++ N+++DK + + RGF F+ E ++ +AIE +
Sbjct: 3 IYVGNLSYTLTENELRDVFSEYGEVASANIIVDKYSGKSRGFGFVDMPNEADAEQAIEAL 62
Query: 140 HGKFLDGRVIFVEIAKSRAELR 161
+G LDGR + V A+ R+ R
Sbjct: 63 NGSQLDGRSLKVNEARPRSNDR 84
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea mays]
Length = 254
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F+ +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|327279530|ref|XP_003224509.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 148
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LF+ GLSF T+E +L F +G + EV +V D+ R RGF F+ Y E+++
Sbjct: 2 ASDEGKLFIGGLSFDTNEQNLEQLFSPYGDIAEVVVVKDRETQRSRGFGFITYCRPEDAK 61
Query: 134 RAIEGMHGKFLDGRVIFVEIA 154
A+ M+G+ +DGR I V+ A
Sbjct: 62 DAMRAMNGESVDGRQIRVDQA 82
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|74096251|ref|NP_001027768.1| glycine rich RNA binding protein [Ciona intestinalis]
gi|5911800|emb|CAB56042.1| glycine rich RNA binding protein [Ciona intestinalis]
Length = 162
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
++FV LS+ +ED LR F G GQ+ EV ++ D+ R RGFAF+ +++E E+ AIE
Sbjct: 5 KVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDAIEN 64
Query: 139 MHGKFLDGRVIFVEIAKSR 157
++ + GR + V A+S+
Sbjct: 65 LNESDVRGRNVSVRQAQSK 83
>gi|229367606|gb|ACQ58783.1| Heterogeneous nuclear ribonucleoprotein G [Anoplopoma fimbria]
Length = 289
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E +L F +G +VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETTEKALEQYFSKYGGIVEVILMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKPIKVEQA 84
>gi|457760|emb|CAA54951.1| ribosomal protein S19 [Arabidopsis thaliana]
gi|459422|emb|CAA54965.1| mitochondrial ribosomal protein S19, nuclear encoded [Arabidopsis
thaliana]
Length = 212
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 55 RGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKI 114
+G P++ + S +ST +L++ GLS T E SL++AF F + E ++ +K+
Sbjct: 13 QGVNVPVSSMLGSLRYMST-----KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKV 67
Query: 115 ANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAEL 160
R RG+ F+ + +E+ + AI M+G+ L+G I V +AK L
Sbjct: 68 TGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDWPSL 113
>gi|116787064|gb|ABK24360.1| unknown [Picea sitchensis]
Length = 365
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 72 STCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEE 131
S Q + +L++ GLS+ T+ D L F +G++ E ++ DK N+ RGFAF+ + T E
Sbjct: 153 SADQAQRKLYIGGLSYDTANDKLLEVFSKYGEIEEGSVAYDKNTNKSRGFAFVTFKTVEA 212
Query: 132 SRRAIEGMHGKFLDGRVIFVEIA 154
++RA++ + K +DGR + V++A
Sbjct: 213 TKRALKEPN-KTIDGRTVTVKLA 234
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL++ TS +L +AF+ +G++ E ++MDK + + RGF F+ + + +++A++
Sbjct: 70 KLFVRGLAWETSSQTLCDAFEQYGEIEEGAVIMDKASGKSRGFGFVTFKHMDSAQKALK- 128
Query: 139 MHGKFLDGRVIFVEIA 154
K +DGR+ +A
Sbjct: 129 EPSKTIDGRITVSNLA 144
>gi|448878409|gb|AGE46167.1| arginine/serine-rich splicing factor SC39 transcript I
[Physcomitrella patens subsp. patens]
Length = 340
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRTS D L F +G++V++ + D+ RGFAF+RY +E+++AIE +
Sbjct: 18 LLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYSDEAQKAIERL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRAVDGRNIVVQSAK 93
>gi|375144786|ref|YP_005007227.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361058832|gb|AEV97823.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 102
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 52/80 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L+VS L F+ ++D L F +GQ+ ++MD+ R RGF F+ +++EE+R+AI+ +
Sbjct: 3 LYVSNLGFQVNDDDLAKLFSQYGQVSSAKVIMDRETGRSRGFGFVEMSSDEEARKAIKEL 62
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
GK ++GR + V A+ +++
Sbjct: 63 EGKPVEGRSLSVSEARPKSD 82
>gi|343427629|emb|CBQ71155.1| related to glycine-rich RNA-binding protein [Sporisorium reilianum
SRZ2]
Length = 192
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+ T++DSL +AF +GQL + ++ D+ R RGF F+ +AT+ E+ AI
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQAEADAAIAA 63
Query: 139 MHGKFLDGRVIFVEIAKSR 157
+H + LDGR I V +A SR
Sbjct: 64 LHDQELDGRRIRVNMANSR 82
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 241
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|440804413|gb|ELR25290.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 146
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 52/79 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GLS+ T ++SLR+AF+ G++++ +++D+ + RGF F+ +++ +E+ A
Sbjct: 4 KLFVGGLSWSTDDNSLRSAFEQHGEVIDAKVILDRDTGKSRGFGFVTFSSADEAEAAKGA 63
Query: 139 MHGKFLDGRVIFVEIAKSR 157
++ LDGR I V+ A R
Sbjct: 64 LNQTDLDGREIRVDSASDR 82
>gi|302781458|ref|XP_002972503.1| hypothetical protein SELMODRAFT_26372 [Selaginella moellendorffii]
gi|300159970|gb|EFJ26589.1| hypothetical protein SELMODRAFT_26372 [Selaginella moellendorffii]
Length = 107
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEES 132
T P L+V+GLS R +E L F G+++E LV D + RGF F+ T E++
Sbjct: 6 TANPGNNLYVTGLSTRVTESWLEEYFAKEGKVIECCLVTDPLTRESRGFGFVTMDTVEDA 65
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKSR 157
R I+ +H LDGR I VE AK +
Sbjct: 66 DRCIKYLHRSNLDGRSITVEKAKRK 90
>gi|242055771|ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
gi|241929006|gb|EES02151.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
Length = 146
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 51/77 (66%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LF+ GLS+ T+E +L++AF +G ++ V ++ + +GF F+++++E ++ A++ +
Sbjct: 61 LFIGGLSYDTNETALKDAFSQYGDVIAVRVICHPTTGKSKGFGFVKFSSENQAAAALQKL 120
Query: 140 HGKFLDGRVIFVEIAKS 156
+G+ LDGR I V A S
Sbjct: 121 NGQVLDGRNIRVHYANS 137
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea mays]
Length = 270
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F+ +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 65 PPSPHSLSTCQ----PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
PP P S+ + R++V LS+ +L N F G+++E +V D+ + R RG
Sbjct: 160 PPPPRDPSSQRGPRGDANRVYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGRSRG 219
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQ 162
F F+ Y + EE AI + G LDGR I V +A+S+ RQ
Sbjct: 220 FGFVTYGSAEEVENAISNLDGSDLDGRQIRVTVAESKPPRRQ 261
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+FV L F L F+ G + V ++ DK+ R RGF F+ ++ +E A+E
Sbjct: 84 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVQEVEAAVEQ 143
Query: 139 MHGKFLDGRVIFV 151
+G LDGR + V
Sbjct: 144 FNGYVLDGRSLRV 156
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea mays]
Length = 256
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F+ +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|300121123|emb|CBK21504.2| unnamed protein product [Blastocystis hominis]
Length = 302
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
++ ++ L++ ++DSLR AF +G L E ++ D+ + + RG +R+ATEE ++AIE
Sbjct: 109 KIIITSLAWSVNDDSLRQAFSKYGNLEECTVLKDRQSGKSRGRGIVRFATEEAMKKAIEE 168
Query: 139 MHGKFLDGRVIFV 151
M+G L+GR I V
Sbjct: 169 MNGTELEGRAIAV 181
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ ++ V GL F + +L + FQ G++ + +++++ + RGF F+ +A+E A+
Sbjct: 3 ENKVIVLGLPFSCDDSALYDYFQECGEITDSRVMVNRENKKSRGFGFVTFASEAAFNNAL 62
Query: 137 EGMHGKFLDGRVIFVEIAKSR 157
E +G DGR I VE A R
Sbjct: 63 E-KNGAEFDGRTIKVEKATER 82
>gi|77166221|ref|YP_344746.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|254435869|ref|ZP_05049376.1| RNA-binding protein [Nitrosococcus oceani AFC27]
gi|76884535|gb|ABA59216.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|207088980|gb|EDZ66252.1| RNA-binding protein [Nitrosococcus oceani AFC27]
Length = 119
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 52/80 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS++ +++ LR AF+ +G++ +++DK +NR +GF F+ A++E++ AI+ M
Sbjct: 20 IYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAEAAIKEM 79
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
H + GR + V A+ R E
Sbjct: 80 HDSDIKGRQVVVNEARPRNE 99
>gi|332664392|ref|YP_004447180.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
gi|332333206|gb|AEE50307.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
Length = 130
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV+ LSF T +D LR AF+ +G + +++D+ R +GF F+ ++E+ AIEG+
Sbjct: 3 IFVAKLSFDTQDDDLREAFEQYGIVDSAKIIVDQSTGRSKGFGFVEMPNDDEALNAIEGL 62
Query: 140 HGKFLDGRVIFVEIAKSR 157
LDGR I + A+ R
Sbjct: 63 DNSDLDGRTIVAKKAEDR 80
>gi|312282683|dbj|BAJ34207.1| unnamed protein product [Thellungiella halophila]
Length = 166
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R FV GL++ T++ L F FG++++ ++ D+ R RGF F+ + E+ R AIE
Sbjct: 8 RCFVGGLAWATADADLERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEE 67
Query: 139 MHGKFLDGRVIFVEIAK 155
M+GK LDGR I V A+
Sbjct: 68 MNGKELDGRSITVNEAQ 84
>gi|359320233|ref|XP_003639286.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1
[Canis lupus familiaris]
gi|359320235|ref|XP_003639287.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 2
[Canis lupus familiaris]
Length = 221
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F +G++V+V + D+ RGFAF+RY EE+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|117619969|ref|YP_856326.1| RNA-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117561376|gb|ABK38324.1| RNA-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 95
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+R + D L F FGQ+ +V++++D+ + +GF F+ E+ +AI G
Sbjct: 5 KIYVGNLSYRMTADELTTVFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGEAEKAIAG 64
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
+HG + GR I V AK + +
Sbjct: 65 LHGTEIGGRTITVNQAKPKTD 85
>gi|421976742|gb|AFX73254.1| glycine rich RNA binding protein 1a [Solanum lycopersicum]
Length = 164
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%)
Query: 81 FVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMH 140
FV GL++ T++ +L +AF +G++V+ ++ D+ R RGF F+ + E+ + AI GM+
Sbjct: 10 FVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAISGMN 69
Query: 141 GKFLDGRVIFVEIAKS 156
G+ LDGR I V A++
Sbjct: 70 GQELDGRNITVNEAQA 85
>gi|408398680|gb|EKJ77809.1| hypothetical protein FPSE_02043 [Fusarium pseudograminearum CS3096]
Length = 178
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+RY E +++ AI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQNAIA 61
Query: 138 GMHGKFLDGRVIFVEIAKS 156
M+ DGR I V+ A
Sbjct: 62 AMNNVEFDGRNIRVDKASD 80
>gi|403341233|gb|EJY69916.1| RNA binding domain-containing protein 28 [Oxytricha trifallax]
Length = 732
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q + ++ V + F E L+ FQ FG +V VN+ + N RGF F+ ++T+EE+++
Sbjct: 27 QKEGKVIVRNIQFDLKEPHLKKEFQKFGTIVAVNVPIKNENNLNRGFGFIEFSTKEEAQK 86
Query: 135 AIEGMHGKFLDGRVIFVE 152
AI+GM+G+ GRV+ VE
Sbjct: 87 AIDGMNGQKYKGRVLAVE 104
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F+ +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRDVDGRNIMVQFAK 93
>gi|302143805|emb|CBI22666.3| unnamed protein product [Vitis vinifera]
Length = 188
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 58 CFPLACLPP--SPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIA 115
C + CL P+SL+ + + RLF+ L R SE +L F FG++V + +
Sbjct: 9 CHQIDCLCSIMDPNSLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRG 68
Query: 116 ---NRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQA 163
PRGFAF+ ++T+EE+ A E MHGK + GR + V +A ++ + A
Sbjct: 69 PKRGEPRGFAFVEFSTKEEAELAKEKMHGKLICGRPLTVRLANEKSLMETA 119
>gi|224109842|ref|XP_002315330.1| predicted protein [Populus trichocarpa]
gi|222864370|gb|EEF01501.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R+FV GLS+ +E L NAF FG++VE +++++ RPRGF F+ +A
Sbjct: 4 KEENRIFVGGLSWDITERQLENAFDRFGKIVESQVMLERDTGRPRGFGFITFADRRAMDD 63
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AI MHG+ RVI V A+
Sbjct: 64 AIREMHGRDFGDRVISVNKAQ 84
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F+ +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 206
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|50417136|gb|AAH77089.1| Snrnp70 protein [Danio rerio]
Length = 306
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 67 SPHSLSTCQPKT--RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
PH+ + Q LFV+ +++ T+E LR F+ +G + + +V +K RPRG+AF+
Sbjct: 90 DPHNDANAQGDAFKTLFVARINYDTTESKLRREFEVYGPIKRIYIVYNKKTGRPRGYAFI 149
Query: 125 RYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
Y E + A + GK +DGR + V++ + R
Sbjct: 150 EYEHERDMHSAYKHADGKKIDGRRVLVDVERGR 182
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Monodelphis
domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Papio
anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Papio
anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Papio
anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4 [Papio
anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName: Full=Splicing
component, 35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFV LS+ ED LR F+GFG++V ++ D+ R +GF ++ +AT ++ +A M
Sbjct: 236 LFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQAEM 295
Query: 140 HGKFLDGRVIFVEIAKSRAELRQAFKNNPRQN 171
H LDGR + V+ + R + A K N R N
Sbjct: 296 HQYELDGRPLNVDFSTPR-QKPDAGKTNDRAN 326
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P LF+ LSF + DS++ F +G + V+L D+ +GF ++ + ++EE+ A
Sbjct: 335 PSNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAA 394
Query: 136 IEGMHGKFLDGRVIFVEIAKSRAE 159
++ ++G+ + GR I ++ A R +
Sbjct: 395 LDALNGQDIAGRNIRIDYAAPRED 418
>gi|225448932|ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis
vinifera]
Length = 278
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R+FV GLS+ +E L N F FG+++E +++++ RPRGF F+ YA
Sbjct: 4 KEENRIFVGGLSWDVTERQLENTFSRFGKIIESQIMLERDTGRPRGFGFITYADRRGMED 63
Query: 135 AIEGMHGKFLDGRVIFVEIAK 155
AI MHG+ R+I V A+
Sbjct: 64 AIREMHGRDFGDRIISVNKAQ 84
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F+ +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F +G++V+V + D+ RGFAF+RY +E+++A++ +
Sbjct: 18 LLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|78356222|ref|YP_387671.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
gi|78218627|gb|ABB37976.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
Length = 114
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS++ SED LR AF+ FG + +V ++ D R +GF F+ A + E+ AIE +
Sbjct: 3 IYVGNLSYQMSEDDLRGAFEEFGAVDKVRIITDHDTGRSKGFGFVEMAEDSEANAAIEAL 62
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
+G+ + GR I V A+ R E
Sbjct: 63 NGREMGGRSITVNEARPRPE 82
>gi|395546030|ref|XP_003774897.1| PREDICTED: RNA-binding motif protein, X chromosome [Sarcophilus
harrisii]
Length = 413
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL+ T+E +L F +G++VEV L+ D+ ++ RGFAF+ + + +++ A
Sbjct: 28 KLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKDAARD 87
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 88 MNGKLLDGKSIKVEQA 103
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|196232841|ref|ZP_03131691.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196223040|gb|EDY17560.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 107
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LSF T+E L++ F G + E L+ DK + RGF F+ ++ EE+++AI+
Sbjct: 4 KLYVGNLSFDTTEMDLQDTFAEAGTVSEATLMQDKFTGKSRGFGFVTMSSSEEAQKAIDL 63
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
HGK + GR + V A+ R E
Sbjct: 64 FHGKTVQGRALTVNEARPREE 84
>gi|195436995|ref|XP_002066430.1| GK18098 [Drosophila willistoni]
gi|194162515|gb|EDW77416.1| GK18098 [Drosophila willistoni]
Length = 470
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 57/97 (58%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A P+ ++T P LF++ +++ TSE LR F+ +G + ++ L+ D+ + +P+G
Sbjct: 85 IALWDPTEIKMATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKG 144
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSR 157
+AF+ Y E + A + GK +D + + V++ ++R
Sbjct: 145 YAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERAR 181
>gi|119609849|gb|EAW89443.1| splicing factor, arginine/serine-rich 2, isoform CRA_d [Homo
sapiens]
gi|193783682|dbj|BAG53593.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 2 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 61
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 62 AMDGAVLDGRELRVQMAR 79
>gi|149478364|ref|XP_001514814.1| PREDICTED: serine/arginine-rich splicing factor 2-like, partial
[Ornithorhynchus anatinus]
Length = 120
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|1405747|emb|CAA67134.1| PR264/SC35 [Mus musculus]
Length = 121
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|297824313|ref|XP_002880039.1| hypothetical protein ARALYDRAFT_483444 [Arabidopsis lyrata subsp.
lyrata]
gi|297325878|gb|EFH56298.1| hypothetical protein ARALYDRAFT_483444 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%)
Query: 58 CFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANR 117
C+ PS S + P LFV LS T+ED++R +G + + LV +
Sbjct: 44 CYNAGLCDPSGDSKAIGDPYCTLFVGRLSHHTTEDTIREVMSKYGWIKNLRLVRHIVTGA 103
Query: 118 PRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVE 152
RG+AF+ Y TE+E A E H +DGR + V+
Sbjct: 104 SRGYAFVEYETEKEMLCAYEDAHHSLIDGREVIVD 138
>gi|223938363|ref|ZP_03630257.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892932|gb|EEF59399.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 127
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+L+V L F +E+ L++ F G + V+L+MDK + RPRGF F+ T+E ++ A++
Sbjct: 3 TKLYVGNLPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQAAVQ 62
Query: 138 GMHGKFLDGRVIFVEIAKSRAE 159
++G GR + V A+ R E
Sbjct: 63 ALNGTDFGGRPLTVNEARPREE 84
>gi|452851903|ref|YP_007493587.1| RNP-1 like RNA-binding protein [Desulfovibrio piezophilus]
gi|451895557|emb|CCH48436.1| RNP-1 like RNA-binding protein [Desulfovibrio piezophilus]
Length = 87
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L+V LS+ T+ED +R AF FG+++ V L+ D+ RPRGF F+ + + A++ +
Sbjct: 5 LYVGNLSWSTTEDEVRAAFAEFGEVLSVKLIEDRETGRPRGFGFVEM-DDNGAGDAVDAL 63
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
GK L GR I V +AK R E
Sbjct: 64 DGKDLGGRNIKVNVAKPREE 83
>gi|374287894|ref|YP_005034979.1| putative RNA-binding protein [Bacteriovorax marinus SJ]
gi|301166435|emb|CBW26011.1| putative RNA-binding protein [Bacteriovorax marinus SJ]
Length = 166
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 65 PPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFL 124
P + H Q K +++ LS++ ++ + F+ FG +V+VNL+ D+ +R +G AF+
Sbjct: 29 PKTLHINEDIQ-KPVVYIGNLSYKRNDYGILKLFKPFGYVVKVNLIQDEKLDRSKGIAFV 87
Query: 125 RYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKNNPR 169
T + ++ A++G++G +DGR I V IA+ R A P+
Sbjct: 88 EMQTIKAAKDAVKGLNGTLVDGRTIKVSIAEDRIHPEHAIMKRPQ 132
>gi|332208823|ref|XP_003253510.1| PREDICTED: serine/arginine-rich splicing factor 8 [Nomascus
leucogenys]
Length = 303
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V L++RTS DSLR F+ +G++ +V + ++ PRGFAF+R+ +++ A M
Sbjct: 16 LKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEHRTKAPRGFAFVRFHDWSDAQDAEAAM 75
Query: 140 HGKFLDGRVIFVEIAK-SRAELRQAFKNNPR 169
G LDGR + V++A+ R +L + + PR
Sbjct: 76 DGAVLDGRELRVQVARYGRRDLSGSSQEEPR 106
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 51/80 (63%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
LFV GLS+ +D L+ F+ FG+++ ++ ++ R +GF ++ +A+ E++R+A+E M
Sbjct: 403 LFVGGLSWNVDDDWLKKEFEKFGEVISARVITERGTERSKGFGYVDFASPEDARKAVEAM 462
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
G +DGR I V+ + + E
Sbjct: 463 AGTEIDGRTINVDFSAPKPE 482
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P T LF+ L F ++DS+ AF +G + V L D R +GF ++ +AT+E + A
Sbjct: 499 PTTTLFIGNLPFSATQDSVYEAFSEYGDINSVRLPTDPETERIKGFGYVEFATQEAATAA 558
Query: 136 IEGMHGK--FLDGRVIFVEIAKSRA 158
+ G ++D R ++ ++ RA
Sbjct: 559 VNVGRGDGIYIDQRQARLDYSQPRA 583
>gi|119623025|gb|EAX02620.1| chromosome X open reading frame 55 [Homo sapiens]
Length = 1066
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 49/73 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ +T E +L+ F +G +++V L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 8 KLFIGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPADAKAAARD 67
Query: 139 MHGKFLDGRVIFV 151
M+GK+LDG+ I V
Sbjct: 68 MNGKYLDGKAIMV 80
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F +G++V+V + D+ RGFAF+RY ++E+++A+E +
Sbjct: 18 LLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYQDEAQKAVEKL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V AK
Sbjct: 78 DGRVVDGREIMVRFAK 93
>gi|312130254|ref|YP_003997594.1| rnp-1 like RNA-binding protein [Leadbetterella byssophila DSM
17132]
gi|311906800|gb|ADQ17241.1| RNP-1 like RNA-binding protein [Leadbetterella byssophila DSM
17132]
Length = 90
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
+FV+ L++ T++D+L AFQ +G + ++ DK R +GF F+ + E++ AI G+
Sbjct: 3 IFVAKLNYDTTDDTLLGAFQEYGAVDSAKVIFDKFTGRSKGFGFVEMPNDAEAQAAINGL 62
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
+ LDGR I V++A+ + E
Sbjct: 63 NETELDGRTIVVKVAEPKGE 82
>gi|8809615|dbj|BAA97166.1| 40S ribosomal protein S19 [Arabidopsis thaliana]
Length = 244
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 55 RGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKI 114
+G P++ + S +ST +L++ GLS T E SL++AF F + E ++ +K+
Sbjct: 45 QGVNVPVSSMLGSLRYMST-----KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKV 99
Query: 115 ANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAEL 160
R RG+ F+ + +E+ + AI M+G+ L+G I V +AK L
Sbjct: 100 TGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDWPSL 145
>gi|343432668|ref|NP_001230348.1| RNA binding motif (RNP1, RRM) protein 3 [Sus scrofa]
Length = 156
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GL+F T E +L + F FG + EV +V D+ R RGF F+ + E +
Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHAS 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRA 158
A+ M+G+ LDGR I V+ A A
Sbjct: 62 NAMRAMNGESLDGRQIRVDHAGKSA 86
>gi|223890219|ref|NP_001138818.1| RNA-binding motif protein, X-linked-like-3 [Homo sapiens]
gi|229485971|sp|Q8N7X1.2|RMXL3_HUMAN RecName: Full=RNA-binding motif protein, X-linked-like-3
Length = 1067
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 49/73 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ +T E +L+ F +G +++V L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPADAKAAARD 68
Query: 139 MHGKFLDGRVIFV 151
M+GK+LDG+ I V
Sbjct: 69 MNGKYLDGKAIMV 81
>gi|194377938|dbj|BAG63332.1| unnamed protein product [Homo sapiens]
Length = 1076
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 49/73 (67%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ +T E +L+ F +G +++V L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPADAKAAARD 68
Query: 139 MHGKFLDGRVIFV 151
M+GK+LDG+ I V
Sbjct: 69 MNGKYLDGKAIMV 81
>gi|357111298|ref|XP_003557451.1| PREDICTED: uncharacterized protein LOC100823909 [Brachypodium
distachyon]
Length = 258
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+FV GLS+ T+E +L AF FG+++E +V ++ R RGF F+ ++ + AI
Sbjct: 8 RIFVGGLSWDTTERTLERAFSDFGKVIETQVVTERDTGRSRGFGFVTFSEPRAADAAIRE 67
Query: 139 MHGKFLDGRVIFVEIAKSR 157
MH LDGR I V A+ R
Sbjct: 68 MHNGELDGRTISVNKAQPR 86
>gi|347756146|ref|YP_004863709.1| RNA-binding proteins (RRM domain) [Candidatus Chloracidobacterium
thermophilum B]
gi|347588663|gb|AEP13192.1| RNA-binding proteins (RRM domain) [Candidatus Chloracidobacterium
thermophilum B]
Length = 112
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LSF+T+ + LR+ F G + +V D+ NR RGF F+ + + E+ RAIE
Sbjct: 2 KLYVGNLSFQTTSEDLRDHFSKAGTVESAQVVEDRDTNRSRGFGFVEFTSTEDGNRAIEM 61
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
HG +GR + V A+ R E
Sbjct: 62 FHGTEFNGRTLTVNEARPREE 82
>gi|345870896|ref|ZP_08822845.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921050|gb|EGV31774.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
++V LS+ T++ LR AF FG++ +VNL+ DK + +GF F+ + AI+G+
Sbjct: 3 IYVGNLSYNTTDSDLREAFAPFGEVAQVNLISDKFTGQSKGFGFVEMPNNSHADAAIKGL 62
Query: 140 HGKFLDGRVIFVEIAKSRAE 159
+G L GR I V AK R++
Sbjct: 63 NGTDLQGRSIKVNEAKPRSD 82
>gi|291049789|ref|NP_001166928.1| RNA binding motif protein [Monodelphis domestica]
gi|284080635|gb|ADB77891.1| RNA binding motif protein [Monodelphis domestica]
Length = 392
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T+E L F +G++VEV L+ D+ N+ RGFAF+ + + +++ A
Sbjct: 9 KLFIGGLNTETNEKGLEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKSLDGKSIKVEQA 84
>gi|2289001|gb|AAB64330.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
Length = 292
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%)
Query: 66 PSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLR 125
PS S + P LFV LS T+ED+LR +G++ + LV + RG+ F+
Sbjct: 46 PSGDSKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVE 105
Query: 126 YATEEESRRAIEGMHGKFLDGRVIFVE 152
Y TE+E RA E H +DGR I V+
Sbjct: 106 YETEKEMLRAYEDAHHSLIDGREIIVD 132
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F+ +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|384250305|gb|EIE23785.1| hypothetical protein COCSUDRAFT_66096 [Coccomyxa subellipsoidea
C-169]
Length = 406
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%)
Query: 66 PSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLR 125
P + +T TRL V L+ +ED ++ F FG + V L +DK+ N PRGFA++
Sbjct: 116 PKANGRATSPVTTRLHVGHLTRNVTEDHIKEIFSTFGAIKSVELSVDKVVNLPRGFAYVE 175
Query: 126 YATEEESRRAIEGMHGKFLDGRVIFVE 152
Y +E+ +A M G LDG V+ V+
Sbjct: 176 YKDRDEAEKARVHMDGGQLDGNVLSVQ 202
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 61 LACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
+A PP P T P RL+V L F +ED LR F+ FG++ + L+MD R +G
Sbjct: 271 MASTPPQPPPKVTSGP-MRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKG 329
Query: 121 FAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAEL 160
+ F+ + +++++A+E ++G L GR + V R ++
Sbjct: 330 YGFITFHNADDAKKALEQLNGFELAGRPMKVGNVTERLDV 369
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F+ +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRTS D L F +G++V++ + DK RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDKRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|1934994|emb|CAA73034.1| SGRP-1 [Solanum commersonii]
Length = 162
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 81 FVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMH 140
FV GL++ T++ +L +AF +G++V+ ++ D+ R RGF F+ + E+ + AI GM+
Sbjct: 10 FVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKEAISGMN 69
Query: 141 GKFLDGRVIFVEIAKS 156
G LDGR I V A++
Sbjct: 70 GSELDGRNITVNEAQA 85
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F +G++V+V + D+ RGFAF+RY EE+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|114052629|ref|NP_001040075.1| RNA-binding motif protein, X chromosome [Bos taurus]
gi|119907483|ref|XP_001250252.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Bos
taurus]
gi|109892459|sp|Q29RT0.1|RBMX_BOVIN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|88954147|gb|AAI14041.1| Testes-specific heterogenous nuclear ribonucleoprotein G-T [Bos
taurus]
gi|296480068|tpg|DAA22183.1| TPA: RNA binding motif protein, X-linked [Bos taurus]
Length = 396
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ T E SL F +G++ EV L+ D+ N+ RGFAF+ + + +++ A+
Sbjct: 9 KLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I V A
Sbjct: 69 MNGKSLDGKAIKVAQA 84
>gi|325185806|emb|CCA20310.1| hypothetical protein SELMODRAFT_151090 [Albugo laibachii Nc14]
gi|325191562|emb|CCA25854.1| hypothetical protein SELMODRAFT_163608 [Albugo laibachii Nc14]
Length = 276
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
++FV GL++ TS ++LRNAF FG + E ++ DK + + +G+ F+ +A E ++ A++
Sbjct: 88 KVFVRGLAWNTSSETLRNAFGKFGDIEEGAVIFDKCSGKSKGYGFVTFAEMEAAQFAVD- 146
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQAFKNNPRQ 170
H +DGR +A R + Q F++NP +
Sbjct: 147 QHIVEIDGRKTMCNLASMRPDSTQVFESNPSE 178
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 36/59 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+LFV GL++ TS+++ R F+ +G + ++ D+ + +GF F+ Y + + RA++
Sbjct: 200 KLFVRGLAWITSDETFRREFEKYGDIEGASIARDRKTGKSKGFGFVTYRSNASAHRALQ 258
>gi|449464088|ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Cucumis sativus]
Length = 823
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
RLFV L + T+E+ L FQ +G + EV+LV+DK R +G A++ Y E ++RA+E
Sbjct: 292 RLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPESAKRALEE 351
Query: 139 MHGKFLDGRVIFVEIAKSRAELRQ 162
+ GR++ V A+ + L +
Sbjct: 352 LDNSIFQGRLLHVMPAELKKTLEK 375
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
Q T+L V ++F + LR F +GQ+ + L M + RGFAF+ + T++E++
Sbjct: 700 QSSTKLLVRNVAFEATGKDLRQLFSPYGQIKSLRLPMK--FGKHRGFAFVEFVTKQEAQN 757
Query: 135 AIEGMHGKFLDGRVIFVEIAKSRAELRQ 162
A + + L GR + +E AK L +
Sbjct: 758 AFQALSNTHLYGRHLVLERAKEGESLEE 785
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 80 LFVSGLSFRTSEDSLRNAF-----QGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
LFV L+F+T+++SLRN F +G +V + K + GF FL + + E S
Sbjct: 605 LFVKNLNFKTTDESLRNHFSEHMKEGKILSAKVKKHVKKGQHVSMGFGFLEFDSVETSTS 664
Query: 135 AIEGMHGKFLDGRVIFVEIAKSRAE 159
+ G LDG + +++ + +
Sbjct: 665 VCSNLQGTVLDGHALILQMCNVKKD 689
>gi|358391693|gb|EHK41097.1| hypothetical protein TRIATDRAFT_301780 [Trichoderma atroviride IMI
206040]
Length = 171
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
++LF+ GL++ T E +LR F+ FG + E +V D+ R RGF F+R+ E +++ AI+
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRFVQEADAQAAID 61
Query: 138 GMHGKFLDGRVIFVEIA 154
M+ DGR I V+ A
Sbjct: 62 AMNNVEFDGRTIRVDKA 78
>gi|332024948|gb|EGI65135.1| Putative RNA-binding protein 19 [Acromyrmex echinatior]
Length = 862
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 50/82 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+F+ L++ T+ED +R F+ +G L EV+L +D++ +P+GF + + E + +A
Sbjct: 322 RMFIRNLTYTTTEDDVRKLFEKYGPLSEVDLPIDRMTRKPKGFGTITFLMPEHAVKAYSE 381
Query: 139 MHGKFLDGRVIFVEIAKSRAEL 160
+ G LDGR++ + K++ L
Sbjct: 382 LDGSILDGRMLHILPGKTKTSL 403
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 73 TCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIAN-RPRGFAFLRYATEEE 131
T Q T++ V + F+ + + F+ +G+L V L + + RGFAF+ Y T+ +
Sbjct: 733 TEQTGTKILVRNIPFQATVQEVTELFKSYGELKAVRLPKKLVGTEKHRGFAFIEYYTKSD 792
Query: 132 SRRAIEGM-HGKFLDGRVIFVEIAKSRAELRQAFK 165
+++A + + L GR + +E A++ + + K
Sbjct: 793 AKKAFKALCQSTHLYGRRLVLEWAQTEEGIEEIRK 827
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP-----RGFAFLRYATE 129
+ T LFV ++F T+E+ L++ F G L + + P G+ F+RY +
Sbjct: 631 ESDTTLFVKNINFSTTEEQLKDYFGKCGPLHYITIATKMDPENPAKKLSMGYGFIRYKRK 690
Query: 130 EESRRAIEGMHGKFLDGRVIFVEIAKSRAEL 160
++ RA++ + LDG+ + E+ +S L
Sbjct: 691 FDADRALKTLQMSVLDGKSL--ELKRSERTL 719
>gi|55778182|gb|AAH86491.1| Rbm3 protein [Mus musculus]
Length = 128
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GL+F T E +L + F FG + EV +V D+ R RGF F+ + E +
Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHAS 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRA 158
A+ M+G+ LDGR I V+ A A
Sbjct: 62 DAMRAMNGESLDGRQIRVDHAGKSA 86
>gi|37595358|gb|AAQ94565.1| RNA binding motif protein [Danio rerio]
Length = 277
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LF+ GL+ TSE L F FG++ EV L+ D+ N+ RGFAF+ Y +++ A
Sbjct: 9 KLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPSDAKDAARE 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKPLDGKPIKVEQA 84
>gi|380018594|ref|XP_003693212.1| PREDICTED: probable RNA-binding protein 19-like [Apis florea]
Length = 900
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
R+F+ LS+ T+ED +R F+ +G L EVNL +D+I + +GF + + E + +A
Sbjct: 367 RMFIRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKSKGFGTITFLMTEHAVKAYSE 426
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
+ G LDGR++ + AK + +
Sbjct: 427 LDGSILDGRMLHLLPAKMKID 447
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIA-NRPRGFAFLRYATEEESR 133
Q T++ + + F+ + + + F+ FG+L V L + + RGFAF+ Y T+ E++
Sbjct: 778 QTGTKILIRNVPFQATAEEITELFKAFGELKAVRLPKKLVGVEKHRGFAFVEYYTKSEAK 837
Query: 134 RAIEGM-HGKFLDGRVIFVEIAKS 156
+A + + L GR + +E A++
Sbjct: 838 KAFKALCQSTHLYGRRLVLEWAQT 861
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRP-----RGFAFLRYATEEES 132
T LFV ++F T+++ L++ F G L V++ K P G+ F+RY + ++
Sbjct: 677 TTLFVKNINFSTTDEQLKSYFDKCGPLHYVSIATKKDPKNPGAKLSMGYGFVRYKRKADA 736
Query: 133 RRAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKN 166
RA++ + LDG+ + E+ +S L K+
Sbjct: 737 DRALKVLQMTVLDGKTL--ELKRSERTLTTDVKS 768
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+S +LFV L++ T SL++AF FG +++ ++ D+ R RGF F+ + E
Sbjct: 1 MSAAPAGGKLFVGNLAWTTDSGSLKSAFGQFGDVIDAIVMQDRETGRSRGFGFITFKEEA 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKSR 157
++ AIE ++G+ LDGR I V A S+
Sbjct: 61 DAPGAIEALNGQELDGREIRVNYANSQ 87
>gi|4455315|emb|CAB36850.1| RNA-binding protein like [Arabidopsis thaliana]
gi|7268090|emb|CAB78428.1| RNA-binding protein like [Arabidopsis thaliana]
Length = 126
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%)
Query: 83 SGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGK 142
S LS T++D LR AF G+G +V+ ++ D+ +R RGF F+ Y++ E+ A+ GM GK
Sbjct: 47 SDLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSGMDGK 106
Query: 143 FLDGRVIFVEI 153
L+GR + V++
Sbjct: 107 ELNGRRVSVKL 117
>gi|4104336|gb|AAD01997.1| heterogeneous nuclear ribonucleoprotein G [Macropus eugenii]
Length = 394
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL+ T+E +L F +G++VEV L+ D+ ++ RGFAF+ + + +++ A
Sbjct: 9 KLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKDAARD 68
Query: 139 MHGKFLDGRVIFVEIA 154
M+GK LDG+ I VE A
Sbjct: 69 MNGKLLDGKSIKVEQA 84
>gi|261862339|ref|NP_001159882.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|261862342|ref|NP_001159883.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|6093936|sp|O89086.1|RBM3_MOUSE RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3
gi|3395381|dbj|BAA32060.1| rbm3 [Mus musculus]
gi|12834559|dbj|BAB22957.1| unnamed protein product [Mus musculus]
gi|12840849|dbj|BAB24981.1| unnamed protein product [Mus musculus]
gi|13879226|gb|AAH06580.1| Rbm3 protein [Mus musculus]
gi|15983757|gb|AAL10707.1| RNA-binding motif protein 3 [Mus musculus]
gi|74180334|dbj|BAE32335.1| unnamed protein product [Mus musculus]
gi|74198712|dbj|BAE39828.1| unnamed protein product [Mus musculus]
gi|74228699|dbj|BAE21846.1| unnamed protein product [Mus musculus]
gi|76780243|gb|AAI06177.1| Rbm3 protein [Mus musculus]
gi|148702004|gb|EDL33951.1| mCG116386, isoform CRA_a [Mus musculus]
gi|148702009|gb|EDL33956.1| mCG116386, isoform CRA_a [Mus musculus]
Length = 153
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GL+F T E +L + F FG + EV +V D+ R RGF F+ + E +
Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHAS 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRA 158
A+ M+G+ LDGR I V+ A A
Sbjct: 62 DAMRAMNGESLDGRQIRVDHAGKSA 86
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 12/105 (11%)
Query: 61 LACLPPSPHSLSTCQPK------------TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVN 108
+ PP P S PK RL+V L+F ++D LR FQ FG + V+
Sbjct: 404 VTVAPPPPVQRSYVAPKPRGPGPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVD 463
Query: 109 LVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEI 153
L D+I + +G+AF+++ +++ A+E M+G L GR + VEI
Sbjct: 464 LHRDQITGKSKGYAFVQFKNMHDAKNAMEKMNGFQLAGRALRVEI 508
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 58 CFPLACLPPSPHSLSTCQPKTRLFVSGLSFRTSEDSLRNAF-QGFGQLVEVNLVMDKIAN 116
P A SPH +FVS LS R + L F Q G++ + ++ D+I+
Sbjct: 286 ASPTARRSSSPHLTEEEHEMRSVFVSQLSARVGDRELSQFFEQQAGKVRDARVITDRISR 345
Query: 117 RPRGFAFLRYATEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELRQAFKN 166
R +G ++ + + ++A+ + G L G + V+ ++ RQA N
Sbjct: 346 RSKGVGYVEFRELDSVQKAL-ALTGTKLLGLPVMVQYTEAEKN-RQAMAN 393
>gi|406950086|gb|EKD80418.1| cp31AHv protein [uncultured bacterium]
Length = 122
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T+LFV L++ T++DSL+ F G + ++ D+ R +GF F+ +++EE+++A+
Sbjct: 3 TKLFVGSLAWATTDDSLQAFFSQAGTVSSARVITDRATGRSKGFGFVEMSSDEEAQKAVA 62
Query: 138 GMHGKFLDGRVIFVEIAK 155
++GK LDGR I V A+
Sbjct: 63 ELNGKELDGRAIVVNEAR 80
>gi|221132804|ref|XP_002167622.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Hydra
magnipapillata]
Length = 161
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 51/78 (65%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L++ L + E L + F +G +V+V+++ D+ RPRGFAF+ + +EE++ AI+G
Sbjct: 6 KLYIGQLDYNADERDLEDLFGKYGTVVKVSIIKDRETQRPRGFAFVEFDSEEDAEAAIDG 65
Query: 139 MHGKFLDGRVIFVEIAKS 156
+G+ ++GR I V AK+
Sbjct: 66 CNGQDVNGRQITVARAKA 83
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 74 AMDGAVLDGRELRVQMAR 91
>gi|449431998|ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
sativus]
gi|449477982|ref|XP_004155183.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
sativus]
Length = 481
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 52/83 (62%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
+ +F+ GLS E+ LR+ + G++ E+ ++ DK + +G+AF+ + T+E +++AIE
Sbjct: 105 SEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIE 164
Query: 138 GMHGKFLDGRVIFVEIAKSRAEL 160
+HGK + G+ I ++ S+ L
Sbjct: 165 DLHGKEVKGKTIRCSLSDSKHRL 187
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 68 PHSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYA 127
P + + Q K L+V + T+ + L+ FQ G++ +VN+ K + R FAF+ YA
Sbjct: 271 PDNSAAAQVKA-LYVKNIPENTTTEQLKELFQQHGEVTKVNMPPGKAGSSKRDFAFIHYA 329
Query: 128 TEEESRRAIEGMHGKFLDGRVIFVEIAKSRAELR 161
+ +A++ ++G+++ V +AK +++ +
Sbjct: 330 ERSSALKAVKETEKYEIEGQLLEVVLAKPQSDKK 363
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 72 STCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVE-VNLVMD-KIANRPRGFAFLRY--- 126
S K RLF+ + ++D R +G G VE + L+ D + NR RGFAF+ Y
Sbjct: 179 SLSDSKHRLFIGNVPKSWTDDEFRRLIEGVGPGVENIELIKDPQNPNRNRGFAFVLYYNN 238
Query: 127 ATEEESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
A + SR+ + + K LDG V A ++
Sbjct: 239 ACADYSRQKMSSANFK-LDGNSPTVSWADPKS 269
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 76 PKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRA 135
P LF+ GL++ +ED + NAF FG++ V L + + RP+GF ++ + +++ + +A
Sbjct: 493 PSNTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKA 552
Query: 136 IEGMHGKFLDGRVIFVEIAKSR 157
+E M+G+ L GR I ++ A R
Sbjct: 553 LETMNGQALGGRPIRIDFAGKR 574
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 50/84 (59%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L+V LS+ D L++ F+ +G +++ + D+ + R RGF ++ +AT E+ RA +
Sbjct: 396 LWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEALRASKEA 455
Query: 140 HGKFLDGRVIFVEIAKSRAELRQA 163
HGK LDGR + V++ +R +A
Sbjct: 456 HGKELDGRALRVDLQPARGPQDRA 479
>gi|37497112|ref|NP_058089.2| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|261862337|ref|NP_001159881.1| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|26340316|dbj|BAC33821.1| unnamed protein product [Mus musculus]
gi|26352956|dbj|BAC40108.1| unnamed protein product [Mus musculus]
gi|37589528|gb|AAH59098.1| Rbm3 protein [Mus musculus]
Length = 154
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 74 CQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESR 133
+ +LFV GL+F T E +L + F FG + EV +V D+ R RGF F+ + E +
Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHAS 61
Query: 134 RAIEGMHGKFLDGRVIFVEIAKSRA 158
A+ M+G+ LDGR I V+ A A
Sbjct: 62 DAMRAMNGESLDGRQIRVDHAGKSA 86
>gi|448878330|gb|AGE46128.1| arginine/serine-rich splicing factor SC31 transcript VI [Sorghum
bicolor]
Length = 107
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V +SFRT+ D L F+ +G++V+V + D+ RGFAF+RY +E+++AI+ +
Sbjct: 18 LLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRNVDGRNIMVQFAK 93
>gi|375108277|ref|ZP_09754538.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374669008|gb|EHR73793.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 167
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V L++ ++SL+ AF FG + ++MD+ R +GF F+ T E++ AI G
Sbjct: 4 KLYVGNLAYSVRDESLQAAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGTGAEAQAAING 63
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
M+G+ L+GR + V A+ R E
Sbjct: 64 MNGQPLEGRAVVVNEARPREE 84
>gi|440789937|gb|ELR11228.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 506
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 71 LSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEE 130
+S +LF+ GLS+ T+ ++LR AF+ +G++ E ++ + R RGF + Y E
Sbjct: 1 MSATVNDRKLFIGGLSWSTTSETLRAAFEKYGKVEEAKVISEPGTGRSRGFGAVMYYNES 60
Query: 131 ESRRAIEGMHGKFLDGRVIFVE-----IAKSRAELRQAFKNNPRQN 171
++ A +GMHG L+GR ++V+ + RA R A + P +
Sbjct: 61 DALAAYKGMHGVELEGRFLYVDRYRDGQERDRAAYRAAGYDRPYEG 106
>gi|323448916|gb|EGB04809.1| hypothetical protein AURANDRAFT_17068, partial [Aureococcus
anophagefferens]
Length = 112
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%)
Query: 69 HSLSTCQPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT 128
S S + + V L+F+ S++ LR F+ FG + +V + +D + PRGFAF+ +
Sbjct: 4 RSESRREEGVSVLVRNLTFKLSKEDLREEFEKFGSVKDVYIPLDYMTREPRGFAFIEMSC 63
Query: 129 EEESRRAIEGMHGKFLDGRVIFVEIA 154
+ E+ AI G+ GK LDGRVI V +A
Sbjct: 64 KAEADEAIAGLDGKDLDGRVIKVLLA 89
>gi|303245896|ref|ZP_07332178.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
gi|302492679|gb|EFL52547.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
Length = 94
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V LSF +SED +R F FG+++ VNL+ D+ R RGF F+ +E +R AI G
Sbjct: 4 KLYVGNLSFNSSEDDIRTQFSNFGEVISVNLITDRETGRLRGFGFVEM-DDEGARAAIAG 62
Query: 139 MHGKFLDGRVIFVEIAKSR 157
M G+ GR + V A+ +
Sbjct: 63 MDGQEFGGRNLKVNEAEDK 81
>gi|226481921|emb|CAX79226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V L++RT+ D LR F FG++ ++ + D RGFAF+RY T+ E+ AI GM
Sbjct: 17 LKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPCTFESRGFAFVRYCTDREADCAIRGM 76
Query: 140 HGKFLDGRVIFVEIAK 155
G +DGR + V+ AK
Sbjct: 77 DGHKVDGREVRVQRAK 92
>gi|406997918|gb|EKE15908.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 93
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+L+V GL + T+E+SL F G + N++ D+++ R +GF F+ +TEE +++AIE
Sbjct: 4 KLYVGGLPYSTTEESLGEHFSQAGAVESANIITDRMSGRSKGFGFVEMSTEEGAQKAIEM 63
Query: 139 MHGKFLDGRVIFVEIAK 155
HGK GR + V A+
Sbjct: 64 FHGKEFGGRTLTVNEAR 80
>gi|302765723|ref|XP_002966282.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
gi|302793049|ref|XP_002978290.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300154311|gb|EFJ20947.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300165702|gb|EFJ32309.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
Length = 92
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRTS D L F +G++V++ + D+ RGFAF+RY +E+++AIE +
Sbjct: 10 LLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFVRYKHADEAQKAIERL 69
Query: 140 HGKFLDGRVIFVEIAK 155
GK +DGR I V+ AK
Sbjct: 70 DGKNVDGRNIVVQFAK 85
>gi|406676693|ref|ZP_11083878.1| hypothetical protein HMPREF1170_02086 [Aeromonas veronii AMC35]
gi|423201900|ref|ZP_17188479.1| hypothetical protein HMPREF1167_02062 [Aeromonas veronii AER39]
gi|423207067|ref|ZP_17193623.1| hypothetical protein HMPREF1168_03258 [Aeromonas veronii AMC34]
gi|423209269|ref|ZP_17195823.1| hypothetical protein HMPREF1169_01341 [Aeromonas veronii AER397]
gi|404615847|gb|EKB12806.1| hypothetical protein HMPREF1167_02062 [Aeromonas veronii AER39]
gi|404617127|gb|EKB14063.1| hypothetical protein HMPREF1169_01341 [Aeromonas veronii AER397]
gi|404621360|gb|EKB18249.1| hypothetical protein HMPREF1168_03258 [Aeromonas veronii AMC34]
gi|404625007|gb|EKB21824.1| hypothetical protein HMPREF1170_02086 [Aeromonas veronii AMC35]
Length = 93
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+++V LS+R + D L+ F FGQ+ +V++++D+ + +GF F+ ++ +AI G
Sbjct: 2 KIYVGNLSYRMTADELKTLFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGDAEKAIAG 61
Query: 139 MHGKFLDGRVIFVEIAKSRAE 159
+HG + GR I V AK + +
Sbjct: 62 LHGTEVGGRTITVNQAKPKTD 82
>gi|344250008|gb|EGW06112.1| Putative RNA-binding protein 3 [Cricetulus griseus]
Length = 169
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
+LFV GL+F T E +L + F FG + EV +V D+ R RGF F+ + E + A+
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 139 MHGKFLDGRVIFVEIAKSRA 158
M+G+ LDGR I V+ A A
Sbjct: 67 MNGESLDGRQIRVDHAGKSA 86
>gi|125575106|gb|EAZ16390.1| hypothetical protein OsJ_31855 [Oryza sativa Japonica Group]
Length = 463
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 77 KTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+ +LF+ G+S+ T+E+ LR+ F +G + + ++ DK+ RPRGF F+ ++ A+
Sbjct: 5 QGKLFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPRGFGFVVFSDPSSVDAAL 64
Query: 137 EGMHGKFLDGRVIFVEIAKSRAELRQAFKNNP 168
H LDGR + V+ A SR E + A NP
Sbjct: 65 VDPH--TLDGRTVDVKRALSREEQQAAKAANP 94
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRG 120
++FV GL +ED R FQ +G + +V ++ D+ RPRG
Sbjct: 129 KIFVGGLPSNLTEDEFRQYFQTYGVVTDVVVMYDQNTQRPRG 170
>gi|224082127|ref|XP_002306575.1| predicted protein [Populus trichocarpa]
gi|222856024|gb|EEE93571.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
L V ++FRT+ D L F +G++V+V + D+ RGFAF+RY EE+++A++ +
Sbjct: 18 LLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYAEEAQKAVDRL 77
Query: 140 HGKFLDGRVIFVEIAK 155
G+ +DGR I V+ AK
Sbjct: 78 DGRVVDGREIMVQFAK 93
>gi|359478318|ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|296084274|emb|CBI24662.3| unnamed protein product [Vitis vinifera]
Length = 108
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 79 RLFV--SGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAI 136
+LF+ +GLS+ T+E L++AF +G+++EV ++ D ++ + +G+ F+++ +++++ A+
Sbjct: 28 KLFIGDAGLSYDTNETILKDAFGQYGEIIEVKVICDHVSGKSKGYGFVQFTSDDDAHIAL 87
Query: 137 EGMHGKFLDGRVIFVEIA 154
+ M G+ LDGR I V A
Sbjct: 88 KEMDGQSLDGRNIRVTYA 105
>gi|84468434|dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 30 PAPATPFTIKRRDFDSLFSLRQGRGRGACFPLACLPPSPHSLSTCQPKTRLFVSGLSFRT 89
P P +RR L +G + A L P + P LFV+ LS+ T
Sbjct: 92 PVPVVETPAERRARVHKLRLEKGAAK-AAEELEKYDPHTDPNISGDPYKTLFVARLSYET 150
Query: 90 SEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGMHGKFLDGRVI 149
+E ++ F+ +G + V LV D +N+PRG+AF+ Y + + A + G+ ++GR +
Sbjct: 151 TESRIKREFESYGAIKRVRLVTDTESNKPRGYAFIEYLHTRDMKAAYKQADGRKIEGRRV 210
Query: 150 FVEIAKSR 157
V++ + R
Sbjct: 211 LVDVERGR 218
>gi|358009411|pdb|2LEA|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm
gi|358009412|pdb|2LEB|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uccagu-3'
gi|358009414|pdb|2LEC|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uggagu-3'
Length = 135
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
T L V L++RTS D+LR F+ +G++ +V + D+ RGFAF+R+ + ++ A++
Sbjct: 48 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 107
Query: 138 GMHGKFLDGRVIFVEIAK 155
M G LDGR + V++A+
Sbjct: 108 AMDGAVLDGRELRVQMAR 125
>gi|544416|sp|Q05966.1|GRP10_BRANA RecName: Full=Glycine-rich RNA-binding protein 10
gi|17819|emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
Length = 169
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%)
Query: 75 QPKTRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRR 134
+ + R FV GL++ T + L F FG++++ ++ D+ R RGF F+ + E+ +
Sbjct: 3 EVEYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKD 62
Query: 135 AIEGMHGKFLDGRVIFVEIAKS 156
AI+ M+GK LDGR I V A+S
Sbjct: 63 AIDEMNGKELDGRTITVNEAQS 84
>gi|347832409|emb|CCD48106.1| hypothetical protein [Botryotinia fuckeliana]
Length = 200
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYAT-------EE 130
++LF+ GL++ T E++LR F FG + E +V D+ R RGF F+RY E
Sbjct: 2 SKLFIGGLAWHTDENALREKFSEFGTVEEAVVVKDRDTGRSRGFGFVRYGQGNPDSSPEA 61
Query: 131 ESRRAIEGMHGKFLDGRVIFVEIAKSRA 158
++ +AI+ M+ DGR I V+ A RA
Sbjct: 62 DAEKAIQEMNSVEFDGRTIRVDKASERA 89
>gi|162455692|ref|YP_001618059.1| RNA recognition motif-containing protein [Sorangium cellulosum So
ce56]
gi|161166274|emb|CAN97579.1| RNA-binding region RNP-1 (RNA recognition motif) [Sorangium
cellulosum So ce56]
Length = 139
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 53/82 (64%)
Query: 78 TRLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIE 137
TRL+V L F ++ S++ AF G++ +V++V D+ + + RGF F+ T E++++AIE
Sbjct: 3 TRLYVGNLPFSATKASVQAAFAQSGEVTDVHIVTDRESGQSRGFGFVTMGTPEQAQQAIE 62
Query: 138 GMHGKFLDGRVIFVEIAKSRAE 159
M+G +DGR + V A+ R +
Sbjct: 63 NMNGAMMDGRPLRVNEAEERVQ 84
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,641,407,646
Number of Sequences: 23463169
Number of extensions: 103878761
Number of successful extensions: 326802
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16756
Number of HSP's successfully gapped in prelim test: 6316
Number of HSP's that attempted gapping in prelim test: 292535
Number of HSP's gapped (non-prelim): 35825
length of query: 171
length of database: 8,064,228,071
effective HSP length: 131
effective length of query: 40
effective length of database: 9,285,520,228
effective search space: 371420809120
effective search space used: 371420809120
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 71 (32.0 bits)